0.020214
0.011671
0.000000
0.000000
0.023341
0.000000
0.000000
0.000000
0.012390
0.00000
0.00000
0.00000
Bouyain, S.
Tu, J.
Huang, G.N.
Worley, P.F.
Leahy, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
49.470
49.470
80.710
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
S
N
291
N
O
N
292
N
O
N
293
N
O
N
294
N
O
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
R
C
N
300
N
O
N
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
N
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
doub
Y
313
N
sing
Y
314
N
sing
N
315
N
sing
Y
316
N
sing
Y
317
N
doub
N
318
N
sing
Y
319
N
doub
N
320
N
sing
Y
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
doub
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
US
Science
SCIEAS
0038
0036-8075
319
476
481
10.1126/science.1151227
18218901
NFAT binding and regulation of T cell activation by the cytoplasmic scaffolding Homer proteins.
2008
10.2210/pdb2p8v/pdb
pdb_00002p8v
100
1
CCD
2003-09-13
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
13174.810
Homer protein homolog 3
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
74
nat
water
Homer-3
no
no
STAREQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDATRNVYRIISIGGAKAIINSTVTPNMTFTKTSQKFGQWA
DSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLARE
STAREQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDATRNVYRIISIGGAKAIINSTVTPNMTFTKTSQKFGQWA
DSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLARE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
HOMER3
9606
Homo sapiens
562
Escherichia coli
B834(DE3)
plasmid
pT7HMT
1
2.16
43.14
VAPOR DIFFUSION, HANGING DROP
7.4
0.2M HEPES pH 7.0-7.4, 30% PEG3350, 105 mM ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2007-11-20
1
1
2011-07-13
1
2
2017-10-18
1
3
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2007-03-23
REL
REL
SO4
SULFATE ION
HOH
water
1DDW
PDB
experimental model
SO4
101
2
SO4
SO4
122
A
HOH
1
3
HOH
HOH
123
A
HOH
2
3
HOH
HOH
124
A
HOH
3
3
HOH
HOH
125
A
HOH
4
3
HOH
HOH
126
A
HOH
5
3
HOH
HOH
127
A
HOH
6
3
HOH
HOH
128
A
HOH
7
3
HOH
HOH
129
A
HOH
8
3
HOH
HOH
130
A
HOH
9
3
HOH
HOH
131
A
HOH
10
3
HOH
HOH
132
A
HOH
11
3
HOH
HOH
133
A
HOH
12
3
HOH
HOH
134
A
HOH
13
3
HOH
HOH
135
A
HOH
14
3
HOH
HOH
136
A
HOH
15
3
HOH
HOH
137
A
HOH
16
3
HOH
HOH
138
A
HOH
17
3
HOH
HOH
139
A
HOH
18
3
HOH
HOH
140
A
HOH
19
3
HOH
HOH
141
A
HOH
20
3
HOH
HOH
142
A
HOH
21
3
HOH
HOH
143
A
HOH
22
3
HOH
HOH
144
A
HOH
23
3
HOH
HOH
145
A
HOH
24
3
HOH
HOH
146
A
HOH
25
3
HOH
HOH
147
A
HOH
26
3
HOH
HOH
148
A
HOH
27
3
HOH
HOH
149
A
HOH
28
3
HOH
HOH
150
A
HOH
29
3
HOH
HOH
151
A
HOH
30
3
HOH
HOH
152
A
HOH
31
3
HOH
HOH
153
A
HOH
32
3
HOH
HOH
154
A
HOH
33
3
HOH
HOH
155
A
HOH
34
3
HOH
HOH
156
A
HOH
35
3
HOH
HOH
157
A
HOH
36
3
HOH
HOH
158
A
HOH
37
3
HOH
HOH
159
A
HOH
38
3
HOH
HOH
160
A
HOH
39
3
HOH
HOH
161
A
HOH
40
3
HOH
HOH
162
A
HOH
41
3
HOH
HOH
163
A
HOH
42
3
HOH
HOH
164
A
HOH
43
3
HOH
HOH
165
A
HOH
44
3
HOH
HOH
166
A
HOH
45
3
HOH
HOH
167
A
HOH
46
3
HOH
HOH
168
A
HOH
47
3
HOH
HOH
169
A
HOH
48
3
HOH
HOH
170
A
HOH
49
3
HOH
HOH
171
A
HOH
50
3
HOH
HOH
172
A
HOH
51
3
HOH
HOH
173
A
HOH
52
3
HOH
HOH
174
A
HOH
53
3
HOH
HOH
175
A
HOH
54
3
HOH
HOH
176
A
HOH
55
3
HOH
HOH
177
A
HOH
56
3
HOH
HOH
178
A
HOH
57
3
HOH
HOH
179
A
HOH
58
3
HOH
HOH
180
A
HOH
59
3
HOH
HOH
181
A
HOH
60
3
HOH
HOH
182
A
HOH
61
3
HOH
HOH
183
A
HOH
62
3
HOH
HOH
184
A
HOH
63
3
HOH
HOH
185
A
HOH
64
3
HOH
HOH
186
A
HOH
65
3
HOH
HOH
187
A
HOH
67
3
HOH
HOH
188
A
HOH
68
3
HOH
HOH
189
A
HOH
69
3
HOH
HOH
190
A
HOH
70
3
HOH
HOH
191
A
HOH
71
3
HOH
HOH
192
A
HOH
72
3
HOH
HOH
193
A
HOH
73
3
HOH
HOH
194
A
HOH
74
3
HOH
HOH
195
A
HOH
75
3
HOH
HOH
196
A
0.420
0.601
3.000
3.000
29.350
29.350
SER
5
n
1
SER
5
A
THR
6
n
2
THR
6
A
ALA
7
n
3
ALA
7
A
ARG
8
n
4
ARG
8
A
GLU
9
n
5
GLU
9
A
GLN
10
n
6
GLN
10
A
PRO
11
n
7
PRO
11
A
ILE
12
n
8
ILE
12
A
PHE
13
n
9
PHE
13
A
SER
14
n
10
SER
14
A
THR
15
n
11
THR
15
A
ARG
16
n
12
ARG
16
A
ALA
17
n
13
ALA
17
A
HIS
18
n
14
HIS
18
A
VAL
19
n
15
VAL
19
A
PHE
20
n
16
PHE
20
A
GLN
21
n
17
GLN
21
A
ILE
22
n
18
ILE
22
A
ASP
23
n
19
ASP
23
A
PRO
24
n
20
PRO
24
A
ALA
25
n
21
ALA
25
A
THR
26
n
22
THR
26
A
LYS
27
n
23
LYS
27
A
ARG
28
n
24
ARG
28
A
ASN
29
n
25
ASN
29
A
TRP
30
n
26
TRP
30
A
ILE
31
n
27
ILE
31
A
PRO
32
n
28
PRO
32
A
ALA
33
n
29
ALA
33
A
GLY
34
n
30
GLY
34
A
LYS
35
n
31
LYS
35
A
HIS
36
n
32
HIS
36
A
ALA
37
n
33
ALA
37
A
LEU
38
n
34
LEU
38
A
THR
39
n
35
THR
39
A
VAL
40
n
36
VAL
40
A
SER
41
n
37
SER
41
A
TYR
42
n
38
TYR
42
A
PHE
43
n
39
PHE
43
A
TYR
44
n
40
TYR
44
A
ASP
45
n
41
ASP
45
A
ALA
46
n
42
ALA
46
A
THR
47
n
43
THR
47
A
ARG
48
n
44
ARG
48
A
ASN
49
n
45
ASN
49
A
VAL
50
n
46
VAL
50
A
TYR
51
n
47
TYR
51
A
ARG
52
n
48
ARG
52
A
ILE
53
n
49
ILE
53
A
ILE
54
n
50
ILE
54
A
SER
55
n
51
SER
55
A
ILE
56
n
52
ILE
56
A
GLY
57
n
53
GLY
57
A
GLY
58
n
54
GLY
58
A
ALA
59
n
55
ALA
59
A
LYS
60
n
56
LYS
60
A
ALA
61
n
57
ALA
61
A
ILE
62
n
58
ILE
62
A
ILE
63
n
59
ILE
63
A
ASN
64
n
60
ASN
64
A
SER
65
n
61
SER
65
A
THR
66
n
62
THR
66
A
VAL
67
n
63
VAL
67
A
THR
68
n
64
THR
68
A
PRO
69
n
65
PRO
69
A
ASN
70
n
66
ASN
70
A
MET
71
n
67
MET
71
A
THR
72
n
68
THR
72
A
PHE
73
n
69
PHE
73
A
THR
74
n
70
THR
74
A
LYS
75
n
71
LYS
75
A
THR
76
n
72
THR
76
A
SER
77
n
73
SER
77
A
GLN
78
n
74
GLN
78
A
LYS
79
n
75
LYS
79
A
PHE
80
n
76
PHE
80
A
GLY
81
n
77
GLY
81
A
GLN
82
n
78
GLN
82
A
TRP
83
n
79
TRP
83
A
ALA
84
n
80
ALA
84
A
ASP
85
n
81
ASP
85
A
SER
86
n
82
SER
86
A
ARG
87
n
83
ARG
87
A
ALA
88
n
84
ALA
88
A
ASN
89
n
85
ASN
89
A
THR
90
n
86
THR
90
A
VAL
91
n
87
VAL
91
A
TYR
92
n
88
TYR
92
A
GLY
93
n
89
GLY
93
A
LEU
94
n
90
LEU
94
A
GLY
95
n
91
GLY
95
A
PHE
96
n
92
PHE
96
A
ALA
97
n
93
ALA
97
A
SER
98
n
94
SER
98
A
GLU
99
n
95
GLU
99
A
GLN
100
n
96
GLN
100
A
HIS
101
n
97
HIS
101
A
LEU
102
n
98
LEU
102
A
THR
103
n
99
THR
103
A
GLN
104
n
100
GLN
104
A
PHE
105
n
101
PHE
105
A
ALA
106
n
102
ALA
106
A
GLU
107
n
103
GLU
107
A
LYS
108
n
104
LYS
108
A
PHE
109
n
105
PHE
109
A
GLN
110
n
106
GLN
110
A
GLU
111
n
107
GLU
111
A
VAL
112
n
108
VAL
112
A
LYS
113
n
109
LYS
113
A
GLU
114
n
110
GLU
114
A
ALA
115
n
111
ALA
115
A
ALA
116
n
112
ALA
116
A
ARG
117
n
113
ARG
117
A
LEU
118
n
114
LEU
118
A
ALA
119
n
115
ALA
119
A
ARG
120
n
116
ARG
120
A
GLU
121
n
117
GLU
121
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
31
A
O
ILE
27
A
N
GLN
21
A
N
GLN
17
A
N
ALA
17
A
N
ALA
13
A
O
LEU
38
A
O
LEU
34
A
N
ASP
45
A
N
ASP
41
A
O
VAL
50
A
O
VAL
46
A
N
GLY
57
A
N
GLY
53
A
O
LYS
60
A
O
LYS
56
A
O
ILE
31
A
O
ILE
27
A
N
GLN
21
A
N
GLN
17
A
N
PHE
20
A
N
PHE
16
A
O
GLY
93
A
O
GLY
89
A
O
THR
90
A
O
THR
86
A
N
ASP
85
A
N
ASP
81
A
O
GLN
82
A
O
GLN
78
A
N
THR
74
A
N
THR
70
1
A
LYS
35
9.87
-49.43
1
A
ASN
64
-155.97
70.00
protein_rep.param
protein.top
dna-rna_rep.param
dna-rna.top
water_rep.param
water.top
ion.param
ion.top
sulf.param
sulf.top
26.706
-0.090
-0.703
0.000
-0.090
0.000
0.180
0.264
0.222
1.850
30.000
1018
9808
10.000
96.000
1
0.00
MOLECULAR REPLACEMENT
1DDW
38.076
1.850
30.000
74
1019
5
0
940
0.006
1.311
2.614
1.500
4.030
2.000
3.600
2.000
5.579
2.500
1.850
30.000
2P8V
10075
0.078
1.010
1
20.300
98.800
0.493
1.85
1.92
930
1.082
94.00
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
phasing
A. Vagin
alexei@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/molrep.html
MOLREP
other
refinement
Axel T. Brunger
axel.brunger@yale.edu
Fortran_77
http://cns.csb.yale.edu/v1.1/
CNS
package
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
data collection
ADSC
Quantum
Crystal structure of human Homer3 EVH1 domain
1
N
N
2
N
N
3
N
N
A
SER
98
A
SER
94
HELX_P
A
GLU
121
A
GLU
117
1
1
24
SIGNALING PROTEIN
Homer3, EVH1 domain, SIGNALING PROTEIN
HOME3_HUMAN
UNP
1
2
Q9NSC5
STAREQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDATRNVYRIISIGGAKAIINSTVTPNMTFTKTSQKFGQWA
DSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLARE
2
118
2P8V
5
121
Q9NSC5
A
1
1
117
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TRP
30
A
TRP
26
A
PRO
32
A
PRO
28
A
GLU
9
A
GLU
5
A
ILE
22
A
ILE
18
A
LEU
38
A
LEU
34
A
ASP
45
A
ASP
41
A
VAL
50
A
VAL
46
A
GLY
57
A
GLY
53
A
LYS
60
A
LYS
56
A
THR
66
A
THR
62
A
TRP
30
A
TRP
26
A
PRO
32
A
PRO
28
A
GLU
9
A
GLU
5
A
ILE
22
A
ILE
18
A
THR
90
A
THR
86
A
GLY
95
A
GLY
91
A
PHE
80
A
PHE
76
A
ASP
85
A
ASP
81
A
PHE
73
A
PHE
69
A
LYS
75
A
LYS
71
BINDING SITE FOR RESIDUE SO4 A 122
A
SO4
122
Software
6
A
THR
68
A
THR
64
6
1_555
A
PRO
69
A
PRO
65
6
1_555
A
ASN
70
A
ASN
66
6
1_555
A
THR
72
A
THR
68
6
5_555
A
ARG
87
A
ARG
83
6
1_555
A
ARG
120
A
ARG
116
6
1_555
154
P 32 2 1