1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Schultz, J.
Hoffmueller, U.
Ashurst, J.
Krause, G.
Schmieder, P.
Macias, M.
Schneider-Mergener, J.
Oschkinat, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
S
C
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
N
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
S
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
O
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
R
C
N
292
N
O
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
Y
233
N
doub
Y
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
doub
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
doub
Y
303
N
sing
Y
304
N
sing
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
5
19
24
10.1038/nsb0198-19
9437424
Specific interactions between the syntrophin PDZ domain and voltage-gated sodium channels.
1998
10.2210/pdb2pdz/pdb
pdb_00002pdz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
9255.769
SYNTROPHIN
PDZ DOMAIN
1
man
polymer
2-PEPTIDE FROM C-TERMINUS OF ALPHA-SUBUNIT OF VOLTAGE-GATED SODIUM CHANNELS
575.675
PEPTIDE GVKESLV
1
man
polymer
no
no
RRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL
EVKYMK
RRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL
EVKYMK
A
polypeptide(L)
no
no
KESLV
KESLV
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
BL21
10090
HEART
Mus musculus
BL21
CYTOPLASM
562
HEART
Escherichia coli
PET
MUSCLE
PET
PET 21D
database_2
pdbx_database_status
pdbx_nmr_exptl_sample_conditions
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Experimental preparation
Other
Data collection
1
0
1998-12-30
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-03-16
1
4
2024-05-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_nmr_exptl_sample_conditions.pressure_units
Y
BNL
1997-12-10
REL
THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED SYNTROPHIN PDZ DOMAIN
LOWEST ENERGIES
200
15
2D-NOESY
2D-TOCSY
1H-15 NOESY AND TOCSY
1H-13C NOESY
HCCH-TOCSY
HCCH-COSY
CBCANH
CBCA(CO)NH
HNCA
HN(CO)CA
1H-13C HQQC-NOESY
70mM
6.2
1
atm
295
K
simulated annealing
1
H2O
BRUNGER
refinement
X-PLOR
3.1
structure solution
X-PLOR
600
Bruker
DRX600
750
Bruker
DRX750
ARG
1
n
1
ARG
1
A
ARG
2
n
2
ARG
2
A
ARG
3
n
3
ARG
3
A
VAL
4
n
4
VAL
4
A
THR
5
n
5
THR
5
A
VAL
6
n
6
VAL
6
A
ARG
7
n
7
ARG
7
A
LYS
8
n
8
LYS
8
A
ALA
9
n
9
ALA
9
A
ASP
10
n
10
ASP
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
GLY
13
n
13
GLY
13
A
LEU
14
n
14
LEU
14
A
GLY
15
n
15
GLY
15
A
ILE
16
n
16
ILE
16
A
SER
17
n
17
SER
17
A
ILE
18
n
18
ILE
18
A
LYS
19
n
19
LYS
19
A
GLY
20
n
20
GLY
20
A
GLY
21
n
21
GLY
21
A
ARG
22
n
22
ARG
22
A
GLU
23
n
23
GLU
23
A
ASN
24
n
24
ASN
24
A
LYS
25
n
25
LYS
25
A
MET
26
n
26
MET
26
A
PRO
27
n
27
PRO
27
A
ILE
28
n
28
ILE
28
A
LEU
29
n
29
LEU
29
A
ILE
30
n
30
ILE
30
A
SER
31
n
31
SER
31
A
LYS
32
n
32
LYS
32
A
ILE
33
n
33
ILE
33
A
PHE
34
n
34
PHE
34
A
LYS
35
n
35
LYS
35
A
GLY
36
n
36
GLY
36
A
LEU
37
n
37
LEU
37
A
ALA
38
n
38
ALA
38
A
ALA
39
n
39
ALA
39
A
ASP
40
n
40
ASP
40
A
GLN
41
n
41
GLN
41
A
THR
42
n
42
THR
42
A
GLU
43
n
43
GLU
43
A
ALA
44
n
44
ALA
44
A
LEU
45
n
45
LEU
45
A
PHE
46
n
46
PHE
46
A
VAL
47
n
47
VAL
47
A
GLY
48
n
48
GLY
48
A
ASP
49
n
49
ASP
49
A
ALA
50
n
50
ALA
50
A
ILE
51
n
51
ILE
51
A
LEU
52
n
52
LEU
52
A
SER
53
n
53
SER
53
A
VAL
54
n
54
VAL
54
A
ASN
55
n
55
ASN
55
A
GLY
56
n
56
GLY
56
A
GLU
57
n
57
GLU
57
A
ASP
58
n
58
ASP
58
A
LEU
59
n
59
LEU
59
A
SER
60
n
60
SER
60
A
SER
61
n
61
SER
61
A
ALA
62
n
62
ALA
62
A
THR
63
n
63
THR
63
A
HIS
64
n
64
HIS
64
A
ASP
65
n
65
ASP
65
A
GLU
66
n
66
GLU
66
A
ALA
67
n
67
ALA
67
A
VAL
68
n
68
VAL
68
A
GLN
69
n
69
GLN
69
A
ALA
70
n
70
ALA
70
A
LEU
71
n
71
LEU
71
A
LYS
72
n
72
LYS
72
A
LYS
73
n
73
LYS
73
A
THR
74
n
74
THR
74
A
GLY
75
n
75
GLY
75
A
LYS
76
n
76
LYS
76
A
GLU
77
n
77
GLU
77
A
VAL
78
n
78
VAL
78
A
VAL
79
n
79
VAL
79
A
LEU
80
n
80
LEU
80
A
GLU
81
n
81
GLU
81
A
VAL
82
n
82
VAL
82
A
LYS
83
n
83
LYS
83
A
TYR
84
n
84
TYR
84
A
MET
85
n
85
MET
85
A
LYS
86
n
86
LYS
86
A
LYS
3
n
1
LYS
3
B
GLU
4
n
2
GLU
4
B
SER
5
n
3
SER
5
B
LEU
6
n
4
LEU
6
B
VAL
7
n
5
VAL
7
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
2
A
O
ARG
2
A
N
VAL
82
A
N
VAL
82
A
O
GLU
81
A
O
GLU
81
A
N
SER
53
A
N
SER
53
A
O
SER
17
A
O
SER
17
A
N
LYS
32
A
N
LYS
32
1
A
A
H
O
ASN
VAL
55
79
1.58
2
A
A
H
O
ASN
VAL
55
79
1.56
2
A
A
O
H
ALA
GLN
38
41
1.60
4
A
A
O
H
VAL
LEU
4
80
1.59
5
A
A
H
O
ASN
VAL
55
79
1.58
7
A
A
H
O
ASN
VAL
55
79
1.56
8
A
A
O
H
VAL
GLU
54
57
1.55
9
A
A
H
O
ASN
VAL
55
79
1.55
14
A
B
O
H
ILE
VAL
16
7
1.56
14
A
A
H
O
ASN
VAL
55
79
1.56
15
A
A
H
O
ASN
VAL
55
79
1.58
1
A
ARG
1
0.302
SIDE CHAIN
1
A
ARG
2
0.258
SIDE CHAIN
1
A
ARG
3
0.254
SIDE CHAIN
1
A
ARG
7
0.264
SIDE CHAIN
1
A
ARG
22
0.259
SIDE CHAIN
2
A
ARG
1
0.316
SIDE CHAIN
2
A
ARG
2
0.305
SIDE CHAIN
2
A
ARG
3
0.311
SIDE CHAIN
2
A
ARG
7
0.265
SIDE CHAIN
2
A
ARG
22
0.165
SIDE CHAIN
3
A
ARG
1
0.218
SIDE CHAIN
3
A
ARG
2
0.269
SIDE CHAIN
3
A
ARG
3
0.317
SIDE CHAIN
3
A
ARG
7
0.298
SIDE CHAIN
3
A
ARG
22
0.311
SIDE CHAIN
4
A
ARG
1
0.288
SIDE CHAIN
4
A
ARG
2
0.283
SIDE CHAIN
4
A
ARG
3
0.173
SIDE CHAIN
4
A
ARG
7
0.294
SIDE CHAIN
4
A
ARG
22
0.223
SIDE CHAIN
5
A
ARG
1
0.297
SIDE CHAIN
5
A
ARG
2
0.202
SIDE CHAIN
5
A
ARG
3
0.206
SIDE CHAIN
5
A
ARG
7
0.281
SIDE CHAIN
5
A
ARG
22
0.309
SIDE CHAIN
6
A
ARG
1
0.316
SIDE CHAIN
6
A
ARG
2
0.283
SIDE CHAIN
6
A
ARG
3
0.260
SIDE CHAIN
6
A
ARG
7
0.301
SIDE CHAIN
6
A
ARG
22
0.292
SIDE CHAIN
7
A
ARG
1
0.215
SIDE CHAIN
7
A
ARG
2
0.271
SIDE CHAIN
7
A
ARG
3
0.314
SIDE CHAIN
7
A
ARG
7
0.211
SIDE CHAIN
7
A
ARG
22
0.170
SIDE CHAIN
8
A
ARG
1
0.289
SIDE CHAIN
8
A
ARG
2
0.206
SIDE CHAIN
8
A
ARG
3
0.307
SIDE CHAIN
8
A
ARG
7
0.254
SIDE CHAIN
8
A
ARG
22
0.244
SIDE CHAIN
9
A
ARG
1
0.233
SIDE CHAIN
9
A
ARG
2
0.281
SIDE CHAIN
9
A
ARG
3
0.238
SIDE CHAIN
9
A
ARG
7
0.313
SIDE CHAIN
9
A
ARG
22
0.290
SIDE CHAIN
10
A
ARG
1
0.306
SIDE CHAIN
10
A
ARG
2
0.161
SIDE CHAIN
10
A
ARG
3
0.316
SIDE CHAIN
10
A
ARG
7
0.244
SIDE CHAIN
10
A
ARG
22
0.295
SIDE CHAIN
11
A
ARG
1
0.308
SIDE CHAIN
11
A
ARG
2
0.312
SIDE CHAIN
11
A
ARG
3
0.314
SIDE CHAIN
11
A
ARG
7
0.168
SIDE CHAIN
11
A
ARG
22
0.316
SIDE CHAIN
12
A
ARG
1
0.225
SIDE CHAIN
12
A
ARG
2
0.270
SIDE CHAIN
12
A
ARG
3
0.254
SIDE CHAIN
12
A
ARG
7
0.160
SIDE CHAIN
12
A
ARG
22
0.317
SIDE CHAIN
13
A
ARG
1
0.181
SIDE CHAIN
13
A
ARG
2
0.306
SIDE CHAIN
13
A
ARG
3
0.308
SIDE CHAIN
13
A
ARG
7
0.232
SIDE CHAIN
13
A
ARG
22
0.166
SIDE CHAIN
14
A
ARG
1
0.289
SIDE CHAIN
14
A
ARG
2
0.239
SIDE CHAIN
14
A
ARG
3
0.310
SIDE CHAIN
14
A
ARG
7
0.318
SIDE CHAIN
14
A
ARG
22
0.215
SIDE CHAIN
15
A
ARG
1
0.314
SIDE CHAIN
15
A
ARG
2
0.189
SIDE CHAIN
15
A
ARG
3
0.313
SIDE CHAIN
15
A
ARG
7
0.282
SIDE CHAIN
15
A
ARG
22
0.243
SIDE CHAIN
1
A
LYS
8
-61.46
-151.10
1
A
ALA
9
55.63
-171.21
1
A
ASP
10
58.48
113.28
1
A
ALA
11
67.26
-62.02
1
A
ILE
16
-176.32
118.17
1
A
ASN
24
-140.53
23.76
1
A
PRO
27
-69.54
54.34
1
A
ILE
28
42.33
88.35
1
A
ALA
44
-176.64
-47.75
1
A
LEU
45
-67.93
82.44
1
A
SER
53
-175.76
131.92
1
A
ASP
58
-44.56
97.88
1
A
LYS
73
-112.74
59.79
1
A
MET
85
-115.47
51.74
2
A
LYS
8
-47.49
155.92
2
A
ILE
16
-176.33
120.52
2
A
ASN
24
-140.90
25.75
2
A
LYS
25
54.29
90.05
2
A
MET
26
-170.03
127.01
2
A
PRO
27
-75.88
45.50
2
A
ILE
28
47.51
90.77
2
A
ALA
44
-175.15
-50.39
2
A
VAL
47
-48.12
165.78
2
A
SER
53
176.96
103.90
2
A
ASP
58
-41.44
101.17
2
A
LYS
73
-119.43
58.21
2
B
SER
5
-79.90
-161.72
2
B
LEU
6
-171.14
99.88
3
A
LYS
8
-67.61
-70.72
3
A
ALA
9
64.39
-70.61
3
A
ASP
10
-163.17
117.01
3
A
ALA
11
-174.87
126.09
3
A
ILE
16
-176.42
117.81
3
A
ILE
28
43.37
88.58
3
A
ALA
44
-165.62
-51.94
3
A
SER
53
-178.68
135.52
3
A
ASP
58
-46.64
101.32
3
A
THR
74
-57.81
-84.82
3
A
MET
85
-101.21
47.32
3
B
SER
5
-54.24
-175.69
4
A
ILE
16
-176.78
118.75
4
A
ILE
28
43.53
89.44
4
A
ALA
44
-169.11
-43.99
4
A
LEU
45
-68.17
80.10
4
A
SER
53
176.08
99.55
4
A
ASP
58
-40.89
103.96
4
A
MET
85
-105.89
54.89
4
B
SER
5
-73.59
-156.80
4
B
LEU
6
-167.07
89.25
5
A
ALA
9
-98.37
32.42
5
A
ASP
10
56.91
108.32
5
A
ALA
11
-175.34
80.10
5
A
ILE
16
-166.24
117.18
5
A
LYS
25
55.07
74.15
5
A
ILE
28
43.45
87.23
5
A
ALA
44
-170.57
-48.03
5
A
SER
53
176.81
135.86
5
A
SER
61
-98.28
36.62
5
A
THR
74
-51.97
-79.88
5
A
MET
85
-116.30
51.91
6
A
ILE
16
-178.80
121.75
6
A
LYS
25
55.58
82.59
6
A
ILE
28
38.88
88.93
6
A
ALA
44
-174.72
-43.61
6
A
LEU
45
-66.83
83.37
6
A
VAL
47
-47.66
169.13
6
A
SER
53
176.31
96.97
6
A
ASP
58
-41.97
106.51
6
A
MET
85
-95.98
51.01
6
B
GLU
4
-58.50
96.85
6
B
LEU
6
-161.60
86.30
7
A
ALA
9
-108.90
-156.78
7
A
ALA
11
-171.45
70.15
7
A
ILE
16
-175.04
123.36
7
A
PRO
27
-69.53
52.33
7
A
ILE
28
42.96
90.73
7
A
ALA
44
-152.28
-46.38
7
A
SER
53
175.59
103.19
7
A
ASP
58
-41.42
101.32
7
A
MET
85
-93.62
59.95
7
B
LEU
6
-160.51
106.75
8
A
ALA
11
53.32
98.39
8
A
ILE
16
-179.15
119.23
8
A
ILE
28
-48.77
97.45
8
A
ALA
44
-174.10
-49.19
8
A
SER
53
175.99
90.73
8
A
ASN
55
37.19
40.45
8
A
LYS
76
-55.45
-76.61
8
A
MET
85
-96.76
49.58
8
B
SER
5
-126.59
-163.37
8
B
LEU
6
-159.16
56.57
9
A
LYS
8
-115.51
79.37
9
A
ILE
16
-173.11
120.26
9
A
LYS
25
56.19
92.07
9
A
MET
26
-170.92
128.25
9
A
PRO
27
-72.82
46.51
9
A
ILE
28
44.33
90.00
9
A
ALA
44
-175.72
-50.11
9
A
VAL
47
-47.74
168.15
9
A
SER
53
176.10
104.30
9
A
ASP
58
-43.33
102.01
9
A
LYS
73
-119.11
59.54
9
A
MET
85
-96.39
49.00
9
B
SER
5
-57.28
-169.51
10
A
LYS
8
-52.33
101.76
10
A
ILE
16
-174.34
115.87
10
A
ASN
24
-140.94
25.65
10
A
LYS
25
54.75
83.23
10
A
PRO
27
-76.76
45.66
10
A
ILE
28
45.07
89.64
10
A
ALA
44
-167.43
-55.05
10
A
LEU
45
-69.43
84.03
10
A
VAL
47
-49.26
153.37
10
A
SER
53
179.09
92.72
10
A
ASP
58
-44.71
102.87
10
A
MET
85
-99.47
51.63
10
B
SER
5
-66.21
-153.03
10
B
LEU
6
-175.81
66.44
11
A
ASP
10
-160.94
113.38
11
A
ALA
11
-176.45
126.70
11
A
ILE
16
-176.58
117.03
11
A
LYS
25
54.67
78.81
11
A
ILE
28
42.57
89.58
11
A
ALA
44
-173.74
-44.47
11
A
LEU
45
-69.09
81.94
11
A
VAL
47
-49.89
169.93
11
A
SER
53
174.58
92.96
11
A
ASP
58
-37.91
102.04
11
A
LYS
73
-106.58
55.17
11
A
VAL
78
-63.72
78.79
11
A
MET
85
-101.29
46.66
11
B
GLU
4
-109.37
-158.89
11
B
SER
5
-175.85
-48.05
11
B
LEU
6
54.60
92.63
12
A
ALA
9
-86.11
-74.20
12
A
ILE
16
-176.51
117.14
12
A
PRO
27
-68.20
55.38
12
A
ILE
28
41.66
88.17
12
A
LYS
32
-165.03
99.89
12
A
ALA
44
-172.73
-45.60
12
A
LEU
45
-67.26
81.49
12
A
SER
53
177.72
126.46
12
A
ASP
58
-44.62
101.41
12
A
MET
85
-116.15
52.21
12
B
GLU
4
-113.71
70.31
12
B
SER
5
-63.60
-176.42
12
B
LEU
6
-160.15
90.64
13
A
ASP
10
62.99
133.78
13
A
ALA
11
61.56
121.88
13
A
ILE
16
-174.92
120.86
13
A
LYS
25
54.39
73.21
13
A
ILE
28
43.06
89.65
13
A
ALA
44
-160.74
-48.43
13
A
VAL
47
-47.19
154.20
13
A
SER
53
178.02
146.33
13
A
ASN
55
59.12
16.08
13
A
MET
85
-100.38
50.93
14
A
ALA
9
-106.58
-158.08
14
A
ALA
11
-160.44
118.86
14
A
ILE
16
-175.16
117.59
14
A
LYS
25
52.48
81.76
14
A
ILE
28
42.36
87.95
14
A
ALA
44
-169.15
-46.95
14
A
SER
53
-178.79
103.06
14
A
ASP
58
-43.49
99.52
14
A
THR
63
-100.72
-166.76
14
A
THR
74
-52.44
-85.34
14
B
LEU
6
59.06
96.75
15
A
LYS
8
-51.73
105.18
15
A
ASP
10
62.32
128.73
15
A
ALA
11
55.94
92.59
15
A
ILE
16
-176.43
120.18
15
A
LYS
25
55.24
83.91
15
A
ILE
28
42.39
88.75
15
A
ALA
38
-56.10
-70.46
15
A
ALA
44
-177.13
-52.73
15
A
LEU
45
-69.56
85.96
15
A
VAL
47
-49.10
162.39
15
A
SER
53
178.96
96.47
15
A
ASP
58
-41.60
97.55
15
A
LYS
73
-118.11
64.82
15
A
VAL
78
-67.28
73.50
15
A
MET
85
-111.78
52.30
15
B
GLU
4
-57.54
87.37
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
SOLUTION STRUCTURE OF THE SYNTROPHIN PDZ DOMAIN IN COMPLEX WITH THE PEPTIDE GVKESLV, NMR, 15 STRUCTURES
1
N
N
2
N
N
A
ALA
38
A
ALA
38
HELX_P
A
THR
42
A
THR
42
1
1
5
A
HIS
64
A
HIS
64
HELX_P
A
LYS
73
A
LYS
73
1
4
10
COMPLEX (SYNTROPHIN/PEPTIDE)
SYNTROPHIN PDZ DOMAIN, VOLTAGE-GATED SODIUM CHANNEL, COMPLEX (SYNTROPHIN-PEPTIDE), COMPLEX (SYNTROPHIN-PEPTIDE) complex
SNTA1_MOUSE
UNP
1
1
Q61234
MASGRRAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSPADGEPGPEPEPAQLNGAAEPGAAPPQLPEALLLQRR
RVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV
KYMKEVSPYFKNSAGGTSVGWDSPPASPLQRQPSSPGPQPRNLSEAKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDA
VFLRAKDEASARSWAGAIQAQIGTFIPWVKDELQALLTATGTAGSQDIKQIGWLTEQLPSGGTAPTLALLTEKELLFYCS
LPQSREALSRPTRTAPLIATSSAHRLVHSGPSKGSVPYDAELSFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHR
AAEGIQEVSTACTWNGRPCSLSVHIDKGFTLWAAEPGAARAMLLRQPFEKLQMSSDDGTSLLFLDFGGAEGEIQLDLHSC
PKTMVFIIHSFLSAKVTRLGLLA
2PDZ
PDB
2
2PDZ
79
164
2PDZ
1
86
Q61234
A
1
1
86
3
7
2PDZ
3
7
2PDZ
B
2
1
5
3
2
anti-parallel
anti-parallel
anti-parallel
A
ARG
2
A
ARG
2
A
ARG
7
A
ARG
7
A
GLU
77
A
GLU
77
A
TYR
84
A
TYR
84
A
ASP
49
A
ASP
49
A
VAL
54
A
VAL
54
A
SER
17
A
SER
17
A
LYS
19
A
LYS
19
A
LEU
29
A
LEU
29
A
LYS
32
A
LYS
32
1
P 1