0.025813 0.014903 0.000000 0.000000 0.029806 0.000000 0.000000 0.000000 0.004057 0.000000 0.000000 0.000000 Uppenberg, J. Gileadi, C. Elkins, J. Bray, J. Burgess-Brown, N. Salah, E. Gileadi, O. Bunkoczi, G. Ugochukwu, E. Umeano, C. von Delft, F. Weigelt, J. Arrowsmith, C.H. Edwards, A. Sundstrom, M. Doyle, D.A. Structural Genomics Consortium (SGC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.000 90.000 120.000 38.740 38.740 246.460 C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C4 H10 O3 106.120 DI(HYDROXYETHYL)ETHER non-polymer C8 H18 O5 194.226 TETRAETHYLENE GLYCOL non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N O N 4 N C N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N N N 29 N C N 30 N N N 31 N N N 32 N O N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N O N 55 N N N 56 N O N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 S C N 67 N C N 68 N O N 69 N C N 70 N C N 71 N O N 72 N O N 73 N O N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N CA N 82 N CL N 83 N N N 84 R C N 85 N C N 86 N O N 87 N C N 88 N S N 89 N O N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 N C N 102 N C N 103 N C N 104 N O N 105 N N N 106 N O N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C N 122 N C N 123 N C N 124 N O N 125 N O N 126 N O N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N N N 137 N C N 138 N C N 139 N O N 140 N O N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 S C N 148 N C N 149 N O N 150 N C Y 151 N C Y 152 N N Y 153 N C Y 154 N C Y 155 N N N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N O N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 S C N 175 N C N 176 N C N 177 N C N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N C N 199 N C N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 N C N 219 N C N 220 N C N 221 N C N 222 N N N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N S N 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N C N 260 N O N 261 N C N 262 N O N 263 N C N 264 N C N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N O N 277 N C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N O N 283 N C N 284 N C N 285 N O N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C N 335 N C N 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C N 352 N O N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 R C N 366 N O N 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N N N 379 S C N 380 N C N 381 N O N 382 N C Y 383 N C Y 384 N C Y 385 N C Y 386 N N Y 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C N 392 N O N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C N 410 N C N 411 N C N 412 N O N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing Y 146 N sing Y 147 N doub Y 148 N doub N 149 N sing Y 150 N sing N 151 N sing Y 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing Y 300 N doub Y 301 N sing Y 302 N sing N 303 N sing Y 304 N doub N 305 N sing Y 306 N doub N 307 N sing Y 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing Y 369 N doub Y 370 N sing Y 371 N sing N 372 N sing Y 373 N doub Y 374 N sing Y 375 N sing N 376 N sing Y 377 N sing Y 378 N doub N 379 N sing Y 380 N doub N 381 N sing Y 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing US Protein Sci. PRCIEI 0795 1469-896X 19 731 741 10.1002/pro.349 20120020 Unusual binding interactions in PDZ domain crystal structures help explain binding mechanisms 2010 10.2210/pdb2pkt/pdb pdb_00002pkt 100 1 CCD 2007-02-11 MARMOSAIC 225 mm CCD SI(111) SINGLE WAVELENGTH M x-ray 1 0.79987 1.0 X10SA SLS 0.79987 SYNCHROTRON SLS BEAMLINE X10SA 9732.871 PDZ and LIM domain protein 1 1 man polymer 40.078 CALCIUM ION 2 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 59.044 ACETATE ION 1 syn non-polymer 194.226 TETRAETHYLENE GLYCOL 1 syn non-polymer 106.120 DI(HYDROXYETHYL)ETHER 1 syn non-polymer 18.015 water 105 nat water Elfin, LIM domain protein CLP-36, C-terminal LIM domain protein 1 no no SMTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTL TVARSEHESDL SMTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTL TVARSEHESDL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Heart Escherichia Escherichia coli sample PDLIM1, CLIM1, CLP36 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) Plasmid PNIC28-BSA4 1 2.74 55.13 VAPOR DIFFUSION, SITTING DROP 6.5 40% PEG 300, 0.2M Calcium acetate, 0.1M Cacodylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 Structural Genomics Consortium SGC pdbx_unobs_or_zero_occ_atoms software citation citation_author pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond database_2 pdbx_unobs_or_zero_occ_atoms pdbx_initial_refinement_model repository Initial release Version format compliance Advisory Version format compliance Advisory Refinement description Database references Derived calculations Advisory Data collection Database references Refinement description 1 0 2007-05-08 1 1 2008-05-01 1 2 2011-07-13 1 3 2017-10-18 1 4 2021-06-23 1 5 2024-02-21 1 6 2024-04-03 _software.name _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession SEQUENCE C-TERMINAL RESIDUES 87-90 (GLU-SER-ASP-LEU) CORRESPOND TO THE C-TERMINAL TAIL OF HUMAN ALPHA-ACTININ-1, UNIPROT ENTRY ACTN1_HUMAN, ACCESSION CODE P12814, SEQUENCE POSITION 889-892. Y RCSB Y RCSB 2007-04-18 REL REL CA CALCIUM ION CL CHLORIDE ION ACT ACETATE ION PG4 TETRAETHYLENE GLYCOL PEG DI(HYDROXYETHYL)ETHER HOH water in-house model other CA 201 2 CA CA 201 A CA 202 2 CA CA 202 A CL 203 3 CL CL 203 A ACT 204 4 ACT ACT 204 A PG4 205 5 PG4 PG4 205 A PEG 206 6 PEG PEG 206 A HOH 1 7 HOH HOH 207 A HOH 2 7 HOH HOH 208 A HOH 3 7 HOH HOH 209 A HOH 4 7 HOH HOH 210 A HOH 5 7 HOH HOH 211 A HOH 6 7 HOH HOH 212 A HOH 7 7 HOH HOH 213 A HOH 8 7 HOH HOH 214 A HOH 9 7 HOH HOH 215 A HOH 10 7 HOH HOH 216 A HOH 11 7 HOH HOH 217 A HOH 12 7 HOH HOH 218 A HOH 13 7 HOH HOH 219 A HOH 14 7 HOH HOH 220 A HOH 15 7 HOH HOH 221 A HOH 16 7 HOH HOH 222 A HOH 17 7 HOH HOH 223 A HOH 18 7 HOH HOH 224 A HOH 19 7 HOH HOH 225 A HOH 20 7 HOH HOH 226 A HOH 21 7 HOH HOH 227 A HOH 22 7 HOH HOH 228 A HOH 23 7 HOH HOH 229 A HOH 24 7 HOH HOH 230 A HOH 25 7 HOH HOH 231 A HOH 26 7 HOH HOH 232 A HOH 27 7 HOH HOH 233 A HOH 28 7 HOH HOH 234 A HOH 29 7 HOH HOH 235 A HOH 30 7 HOH HOH 236 A HOH 31 7 HOH HOH 237 A HOH 32 7 HOH HOH 238 A HOH 33 7 HOH HOH 239 A HOH 34 7 HOH HOH 240 A HOH 35 7 HOH HOH 241 A HOH 36 7 HOH HOH 242 A HOH 37 7 HOH HOH 243 A HOH 38 7 HOH HOH 244 A HOH 39 7 HOH HOH 245 A HOH 40 7 HOH HOH 246 A HOH 41 7 HOH HOH 247 A HOH 42 7 HOH HOH 248 A HOH 43 7 HOH HOH 249 A HOH 44 7 HOH HOH 250 A HOH 45 7 HOH HOH 251 A HOH 46 7 HOH HOH 252 A HOH 47 7 HOH HOH 253 A HOH 48 7 HOH HOH 254 A HOH 49 7 HOH HOH 255 A HOH 50 7 HOH HOH 256 A HOH 51 7 HOH HOH 257 A HOH 52 7 HOH HOH 258 A HOH 53 7 HOH HOH 259 A HOH 54 7 HOH HOH 260 A HOH 55 7 HOH HOH 261 A HOH 56 7 HOH HOH 262 A HOH 57 7 HOH HOH 263 A HOH 58 7 HOH HOH 264 A HOH 59 7 HOH HOH 265 A HOH 60 7 HOH HOH 266 A HOH 61 7 HOH HOH 267 A HOH 62 7 HOH HOH 268 A HOH 63 7 HOH HOH 269 A HOH 64 7 HOH HOH 270 A HOH 65 7 HOH HOH 271 A HOH 66 7 HOH HOH 272 A HOH 67 7 HOH HOH 273 A HOH 68 7 HOH HOH 274 A HOH 69 7 HOH HOH 275 A HOH 70 7 HOH HOH 276 A HOH 71 7 HOH HOH 277 A HOH 72 7 HOH HOH 278 A HOH 73 7 HOH HOH 279 A HOH 74 7 HOH HOH 280 A HOH 75 7 HOH HOH 281 A HOH 76 7 HOH HOH 282 A HOH 77 7 HOH HOH 283 A HOH 78 7 HOH HOH 284 A HOH 79 7 HOH HOH 285 A HOH 80 7 HOH HOH 286 A HOH 81 7 HOH HOH 287 A HOH 82 7 HOH HOH 288 A HOH 83 7 HOH HOH 289 A HOH 84 7 HOH HOH 290 A HOH 85 7 HOH HOH 291 A HOH 86 7 HOH HOH 292 A HOH 87 7 HOH HOH 293 A HOH 88 7 HOH HOH 294 A HOH 89 7 HOH HOH 295 A HOH 90 7 HOH HOH 296 A HOH 91 7 HOH HOH 297 A HOH 92 7 HOH HOH 298 A HOH 93 7 HOH HOH 299 A HOH 94 7 HOH HOH 300 A HOH 95 7 HOH HOH 301 A HOH 96 7 HOH HOH 302 A HOH 97 7 HOH HOH 303 A HOH 98 7 HOH HOH 304 A HOH 99 7 HOH HOH 305 A HOH 100 7 HOH HOH 306 A HOH 101 7 HOH HOH 307 A HOH 102 7 HOH HOH 308 A HOH 103 7 HOH HOH 309 A HOH 104 7 HOH HOH 310 A HOH 105 7 HOH HOH 311 A 2.500 2.500 14.020 14.020 SER 0 n 1 SER 0 A MET 1 n 2 MET 1 A THR 2 n 3 THR 2 A THR 3 n 4 THR 3 A GLN 4 n 5 GLN 4 A GLN 5 n 6 GLN 5 A ILE 6 n 7 ILE 6 A ASP 7 n 8 ASP 7 A LEU 8 n 9 LEU 8 A GLN 9 n 10 GLN 9 A GLY 10 n 11 GLY 10 A PRO 11 n 12 PRO 11 A GLY 12 n 13 GLY 12 A PRO 13 n 14 PRO 13 A TRP 14 n 15 TRP 14 A GLY 15 n 16 GLY 15 A PHE 16 n 17 PHE 16 A ARG 17 n 18 ARG 17 A LEU 18 n 19 LEU 18 A VAL 19 n 20 VAL 19 A GLY 20 n 21 GLY 20 A GLY 21 n 22 GLY 21 A LYS 22 n 23 LYS 22 A ASP 23 n 24 ASP 23 A PHE 24 n 25 PHE 24 A GLU 25 n 26 GLU 25 A GLN 26 n 27 GLN 26 A PRO 27 n 28 PRO 27 A LEU 28 n 29 LEU 28 A ALA 29 n 30 ALA 29 A ILE 30 n 31 ILE 30 A SER 31 n 32 SER 31 A ARG 32 n 33 ARG 32 A VAL 33 n 34 VAL 33 A THR 34 n 35 THR 34 A PRO 35 n 36 PRO 35 A GLY 36 n 37 GLY 36 A SER 37 n 38 SER 37 A LYS 38 n 39 LYS 38 A ALA 39 n 40 ALA 39 A ALA 40 n 41 ALA 40 A LEU 41 n 42 LEU 41 A ALA 42 n 43 ALA 42 A ASN 43 n 44 ASN 43 A LEU 44 n 45 LEU 44 A CYS 45 n 46 CYS 45 A ILE 46 n 47 ILE 46 A GLY 47 n 48 GLY 47 A ASP 48 n 49 ASP 48 A VAL 49 n 50 VAL 49 A ILE 50 n 51 ILE 50 A THR 51 n 52 THR 51 A ALA 52 n 53 ALA 52 A ILE 53 n 54 ILE 53 A ASP 54 n 55 ASP 54 A GLY 55 n 56 GLY 55 A GLU 56 n 57 GLU 56 A ASN 57 n 58 ASN 57 A THR 58 n 59 THR 58 A SER 59 n 60 SER 59 A ASN 60 n 61 ASN 60 A MET 61 n 62 MET 61 A THR 62 n 63 THR 62 A HIS 63 n 64 HIS 63 A LEU 64 n 65 LEU 64 A GLU 65 n 66 GLU 65 A ALA 66 n 67 ALA 66 A GLN 67 n 68 GLN 67 A ASN 68 n 69 ASN 68 A ARG 69 n 70 ARG 69 A ILE 70 n 71 ILE 70 A LYS 71 n 72 LYS 71 A GLY 72 n 73 GLY 72 A CYS 73 n 74 CYS 73 A THR 74 n 75 THR 74 A ASP 75 n 76 ASP 75 A ASN 76 n 77 ASN 76 A LEU 77 n 78 LEU 77 A THR 78 n 79 THR 78 A LEU 79 n 80 LEU 79 A THR 80 n 81 THR 80 A VAL 81 n 82 VAL 81 A ALA 82 n 83 ALA 82 A ARG 83 n 84 ARG 83 A SER 84 n 85 SER 84 A GLU 85 n 86 GLU 85 A HIS 86 n 87 HIS 86 A GLU 87 n 88 GLU 87 A SER 88 n 89 SER 88 A ASP 89 n 90 ASP 89 A LEU 90 n 91 LEU 90 A 2.7190 13.9864 5.3571 84.0145 24.1746 11.5033 0.2156 -0.0925 -0.5429 -0.4198 0.0242 -1.6411 0.2860 0.5124 -0.2398 0.0985 0.0650 0.0381 0.1151 -0.0136 0.2177 refined 18.5156 -15.3015 9.8475 X-RAY DIFFRACTION 0.9735 0.4735 0.1366 1.7150 -0.3223 1.8667 0.0758 -0.1664 -0.0104 0.1473 -0.1096 -0.0078 0.0502 0.0558 0.0338 0.0876 0.0005 -0.0087 0.0313 -0.0154 0.0657 refined 9.3454 -9.4514 8.2653 X-RAY DIFFRACTION 16.4618 -11.9549 2.5321 15.4841 0.1462 3.3485 -0.1769 0.0892 -0.1811 0.3797 0.1732 0.7436 -0.0805 -0.0859 0.0037 0.0918 -0.0299 0.0240 0.0289 0.0030 0.1412 refined 22.2230 -28.5756 -2.6658 X-RAY DIFFRACTION A 0 A 1 A 9 A 10 X-RAY DIFFRACTION 1 ALL A 10 A 11 A 84 A 85 X-RAY DIFFRACTION 2 ALL A 85 A 86 A 90 A 91 X-RAY DIFFRACTION 3 ALL author_defined_assembly 1 monomeric A ASP 54 A O ASP 55 10_555 A CA 201 B CA CA 1_555 A GLU 56 A OE2 GLU 57 10_555 106.3 A ASP 54 A O ASP 55 10_555 A CA 201 B CA CA 1_555 A ASN 76 A O ASN 77 1_555 166.8 A GLU 56 A OE2 GLU 57 10_555 A CA 201 B CA CA 1_555 A ASN 76 A O ASN 77 1_555 82.7 A ASP 54 A O ASP 55 10_555 A CA 201 B CA CA 1_555 A ASN 76 A OD1 ASN 77 1_555 87.4 A GLU 56 A OE2 GLU 57 10_555 A CA 201 B CA CA 1_555 A ASN 76 A OD1 ASN 77 1_555 93.0 A ASN 76 A O ASN 77 1_555 A CA 201 B CA CA 1_555 A ASN 76 A OD1 ASN 77 1_555 82.4 A ASP 54 A O ASP 55 10_555 A CA 201 B CA CA 1_555 A HOH 214 H O HOH 1_555 89.3 A GLU 56 A OE2 GLU 57 10_555 A CA 201 B CA CA 1_555 A HOH 214 H O HOH 1_555 91.9 A ASN 76 A O ASN 77 1_555 A CA 201 B CA CA 1_555 A HOH 214 H O HOH 1_555 100.2 A ASN 76 A OD1 ASN 77 1_555 A CA 201 B CA CA 1_555 A HOH 214 H O HOH 1_555 174.7 A ASP 54 A O ASP 55 10_555 A CA 201 B CA CA 1_555 A HOH 237 H O HOH 1_555 84.8 A GLU 56 A OE2 GLU 57 10_555 A CA 201 B CA CA 1_555 A HOH 237 H O HOH 1_555 169.0 A ASN 76 A O ASN 77 1_555 A CA 201 B CA CA 1_555 A HOH 237 H O HOH 1_555 86.3 A ASN 76 A OD1 ASN 77 1_555 A CA 201 B CA CA 1_555 A HOH 237 H O HOH 1_555 86.7 A HOH 214 H O HOH 1_555 A CA 201 B CA CA 1_555 A HOH 237 H O HOH 1_555 88.8 A ASP 89 A OD2 ASP 90 1_555 A CA 202 C CA CA 1_555 A ASP 89 A OD2 ASP 90 8_435 80.7 A ASP 89 A OD2 ASP 90 1_555 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 1_555 94.6 A ASP 89 A OD2 ASP 90 8_435 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 1_555 89.1 A ASP 89 A OD2 ASP 90 1_555 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 8_435 89.1 A ASP 89 A OD2 ASP 90 8_435 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 8_435 94.6 A ACT 204 E O ACT 1_555 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 8_435 175.2 A ASP 89 A OD2 ASP 90 1_555 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 1_555 92.9 A ASP 89 A OD2 ASP 90 8_435 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 1_555 173.2 A ACT 204 E O ACT 1_555 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 1_555 89.0 A ACT 204 E O ACT 8_435 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 1_555 87.7 A ASP 89 A OD2 ASP 90 1_555 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 8_435 173.2 A ASP 89 A OD2 ASP 90 8_435 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 8_435 92.9 A ACT 204 E O ACT 1_555 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 8_435 87.7 A ACT 204 E O ACT 8_435 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 8_435 89.0 A HOH 215 H O HOH 1_555 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 8_435 93.5 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 8 A N LEU 9 A O LEU 77 A O LEU 78 A O ALA 82 A O ALA 83 A N VAL 49 A N VAL 50 A N ILE 53 A N ILE 54 A O GLU 56 A O GLU 57 A N VAL 19 A N VAL 20 A O ALA 29 A O ALA 30 1 A CA 202 C CA 1 A CL 203 D CL 1 A CD GLN 9 A CD GLN 10 1 Y 1 A OE1 GLN 9 A OE1 GLN 10 1 Y 1 A NE2 GLN 9 A NE2 GLN 10 1 Y 1 A CA LYS 38 A A CA LYS 39 0 Y 1 A CB LYS 38 A A CB LYS 39 0 Y 1 A CG LYS 38 A A CG LYS 39 0 Y 1 A CD LYS 38 A A CD LYS 39 0 Y 1 A CE LYS 38 A A CE LYS 39 0 Y 1 A NZ LYS 38 A A NZ LYS 39 0 Y 1 A O4 PEG 206 G O4 PEG 1 1 N 7.375 0.170 0.090 0.000 0.170 0.000 -0.260 0.952 0.943 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.231 0.212 0.213 0.213 1.500 41.060 960 18632 18632 5.200 98.840 3.157 0.062 RANDOM LIKELY RESIDUAL 1 isotropic THROUGHOUT 0.00 0.00 MOLECULAR REPLACEMENT 0.077 0.076 0.800 0.800 1.400 in-house model MAXIMUM LIKELIHOOD MASK 1.500 41.060 105 808 26 0 677 0.005 0.021 712 0.001 0.020 477 0.919 1.986 959 0.767 3.000 1177 5.118 5.000 92 36.057 25.517 29 9.282 15.000 118 9.390 15.000 4 0.055 0.200 112 0.002 0.020 785 0.001 0.020 122 0.179 0.200 105 0.174 0.200 489 0.151 0.200 337 0.074 0.200 404 0.107 0.200 55 0.104 0.200 7 0.169 0.200 9 0.213 0.200 33 0.073 0.200 20 0.054 0.200 5 0.236 1.500 476 0.048 1.500 187 0.390 2.000 733 0.696 3.000 267 1.082 4.500 225 0.316 0.339 1.539 67 1123 1190 20 89.010 18.3 1.5 50 2PKT 18632 18632 0 0 0.114 1 14.3 13.8 98.3 0.55 1.50 1.59 2.8 2617 1 6.6 89.6 phasing R. J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER other refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html REFMAC program 5.3.0034 data extraction PDB sw-help@rcsb.rutgers.edu April. 3, 2006 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 2.000 data collection MAR345 CCD data reduction XDS data scaling XDS N Crystal structure of the human CLP-36 (PDLIM1) bound to the C-terminal peptide of human alpha-actinin-1 1 N N 2 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N A LYS 22 A LYS 23 HELX_P A GLU 25 A GLU 26 5 1 4 A SER 37 A SER 38 HELX_P A ALA 42 A ALA 43 1 2 6 A THR 62 A THR 63 HELX_P A GLY 72 A GLY 73 1 3 11 metalc 2.375 A ASP 54 A O ASP 55 10_555 A CA 201 B CA CA 1_555 metalc 2.379 A GLU 56 A OE2 GLU 57 10_555 A CA 201 B CA CA 1_555 metalc 2.281 A ASN 76 A O ASN 77 1_555 A CA 201 B CA CA 1_555 metalc 2.370 A ASN 76 A OD1 ASN 77 1_555 A CA 201 B CA CA 1_555 metalc 2.371 A ASP 89 A OD2 ASP 90 1_555 A CA 202 C CA CA 1_555 metalc 2.370 A ASP 89 A OD2 ASP 90 8_435 A CA 202 C CA CA 1_555 metalc 2.219 A CA 201 B CA CA 1_555 A HOH 214 H O HOH 1_555 metalc 2.377 A CA 201 B CA CA 1_555 A HOH 237 H O HOH 1_555 metalc 2.396 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 1_555 metalc 2.396 A CA 202 C CA CA 1_555 A ACT 204 E O ACT 8_435 metalc 2.329 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 1_555 metalc 2.329 A CA 202 C CA CA 1_555 A HOH 215 H O HOH 8_435 STRUCTURAL GENOMICS, UNKNOWN FUNCTION PDZ DOMAIN, Structural Genomics, Structural Genomics Consortium, SGC, UNKNOWN FUNCTION A GLY 10 A GLY 11 1 A PRO 11 A PRO 12 2.32 A GLY 12 A GLY 13 1 A PRO 13 A PRO 14 -1.50 PDLI1_HUMAN UNP 1 1 O00151 MTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLT VARSEH 1 86 2PKT 1 86 O00151 A 1 2 87 1 cloning artifact SER 0 2PKT A O00151 UNP 1 1 SEE REMARK 999 GLU 87 2PKT A O00151 UNP 88 1 SEE REMARK 999 SER 88 2PKT A O00151 UNP 89 1 SEE REMARK 999 ASP 89 2PKT A O00151 UNP 90 1 SEE REMARK 999 LEU 90 2PKT A O00151 UNP 91 4 2 anti-parallel anti-parallel anti-parallel anti-parallel A MET 1 A MET 2 A GLN 9 A GLN 10 A ASN 76 A ASN 77 A SER 84 A SER 85 A VAL 49 A VAL 50 A ILE 53 A ILE 54 A GLU 56 A GLU 57 A ASN 57 A ASN 58 A PHE 16 A PHE 17 A GLY 21 A GLY 22 A GLN 26 A GLN 27 A VAL 33 A VAL 34 BINDING SITE FOR RESIDUE CA A 201 A CA 201 Software 5 BINDING SITE FOR RESIDUE CA A 202 A CA 202 Software 6 BINDING SITE FOR RESIDUE CL A 203 A CL 203 Software 2 BINDING SITE FOR RESIDUE ACT A 204 A ACT 204 Software 7 BINDING SITE FOR RESIDUE PG4 A 205 A PG4 205 Software 10 BINDING SITE FOR RESIDUE PEG A 206 A PEG 206 Software 3 A ASP 54 A ASP 55 5 10_555 A GLU 56 A GLU 57 5 10_555 A ASN 76 A ASN 77 5 1_555 A HOH 214 H HOH 5 1_555 A HOH 237 H HOH 5 1_555 A ASP 89 A ASP 90 6 8_435 A ASP 89 A ASP 90 6 1_555 A ACT 204 E ACT 6 8_435 A ACT 204 E ACT 6 1_555 A HOH 215 H HOH 6 1_555 A HOH 215 H HOH 6 8_435 A THR 34 A THR 35 2 1_555 A THR 34 A THR 35 2 8_555 A ARG 17 A ARG 18 7 1_545 A GLU 87 A GLU 88 7 1_555 A ASP 89 A ASP 90 7 8_435 A ASP 89 A ASP 90 7 1_555 A CA 202 C CA 7 1_555 A CA 202 C CA 7 8_435 A HOH 232 H HOH 7 1_545 A LYS 22 A LYS 23 10 1_555 A GLU 25 A GLU 26 10 1_555 A GLN 26 A GLN 27 10 1_555 A PRO 27 A PRO 28 10 1_555 A LEU 28 A LEU 29 10 1_555 A VAL 49 A VAL 50 10 1_555 A ILE 50 A ILE 51 10 1_555 A THR 58 A THR 59 10 1_555 A SER 59 A SER 60 10 1_555 A HOH 238 H HOH 10 1_555 A GLY 12 A GLY 13 3 8_555 A VAL 33 A VAL 34 3 1_555 A PRO 35 A PRO 36 3 1_555 179 P 65 2 2