data_2PL4 # _entry.id 2PL4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PL4 pdb_00002pl4 10.2210/pdb2pl4/pdb NDB AD0068 ? ? RCSB RCSB042497 ? ? WWPDB D_1000042497 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 115D 'D-(GG[Br]UA[Br]UACC), with the two Br replacing THY methyl groups' unspecified PDB 1VJ4 'D-(GGTATACC) initial structure' unspecified PDB 2PKV 'D-(GGTATACC) ambient pressure' unspecified PDB 2PL8 'D-(GGTATACC) under 1.04 GPA hydrostatic pressure' unspecified PDB 2PLB 'D-(GGTATACC) at 1.39 GPA hydrostatic pressure' unspecified PDB 2PLO 'D-(GTATACC) LOW TEMPERATURE (100K)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PL4 _pdbx_database_status.recvd_initial_deposition_date 2007-04-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Prange, T.' 1 'Girard, E.' 2 'Kahn, R.' 3 'Fourme, R.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Adaptation of the base-paired double-helix molecular architecture to extreme pressure.' 'Nucleic Acids Res.' 35 4800 4808 2007 NARHAD UK 0305-1048 0389 ? 17617642 10.1093/nar/gkm511 1 'Coexistence of A-and B-Form DNA in a Single Crystal Lattice' Nature 337 190 193 1989 NATUAS UK 0028-0836 0006 ? 2911354 10.1038/337190a0 2 'High-pressure protein crystallography (HPPX): Instrumentation, methodology and results on lysozyme crystals' 'J.Synchrotron Radia.' 8 1149 1156 2001 JSYRES DK 0909-0495 1210 ? 11524565 10.1107/S0909049501011037 3 ;High pressure macromolecular crystallography: The 140 MPa crystal structure at 2.3 A resolution of urate oxidase, A 135 KD tetrameric assembly ; 'BIOCHEM.BIOPHYS.ACTA PROTEINS & PROTEOMICS' 1764 391 397 2006 ? NE 1570-9639 ? ? 16478683 10.1016/j.bbapap.2006.01.006 4 'Crystal structure of hen egg-white lysozyme at a hydrostatic pressure of 1000 atmospheres.' J.Mol.Biol. 193 157 170 1987 JMOBAK UK 0022-2836 0070 ? 3586017 '10.1016/0022-2836(87)90634-6' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Girard, E.' 1 ? primary 'Prange, T.' 2 ? primary 'Dhaussy, A.C.' 3 ? primary 'Migianu-Griffoni, E.' 4 ? primary 'Lecouvey, M.' 5 ? primary 'Chervin, J.C.' 6 ? primary 'Mezouar, M.' 7 ? primary 'Kahn, R.' 8 ? primary 'Fourme, R.' 9 ? 1 'Doucet, J.' 10 ? 1 'Benoit, J.-P.' 11 ? 1 'Cruse, W.B.T.' 12 ? 1 'Prange, T.' 13 ? 1 'Kennard, O.' 14 ? 2 'Fourme, R.' 15 ? 2 'Kahn, R.' 16 ? 2 'Mezouar, M.' 17 ? 2 'Girard, E.' 18 ? 2 'Horentrup, C.' 19 ? 2 'Prange, T.' 20 ? 2 'Ascone, I.' 21 ? 3 ;Colloc'h, N. ; 22 ? 3 'Girard, E.' 23 ? 3 'Dhaussy, A.C.' 24 ? 3 'Kahn, R.' 25 ? 3 'Ascone, I.' 26 ? 3 'Mezouar, M.' 27 ? 3 'Fourme, R.' 28 ? 4 'Kundrot, C.E.' 29 ? 4 'Richards, F.M.' 30 ? # _cell.entry_id 2PL4 _cell.length_a 43.710 _cell.length_b 43.710 _cell.length_c 40.710 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PL4 _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Synthetic DNA octamer' 2426.617 2 ? ? ? ? 2 water nat water 18.015 75 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DT)(DA)(DT)(DA)(DC)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GGTATACC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DT n 1 6 DA n 1 7 DC n 1 8 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SYNTHETIC DNA' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2PL4 _struct_ref.pdbx_db_accession 2PL4 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PL4 A 1 ? 8 ? 2PL4 1 ? 8 ? 1 8 2 1 2PL4 B 1 ? 8 ? 2PL4 1 ? 8 ? 1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # _exptl.entry_id 2PL4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_percent_sol 44.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details ;10 mg of octamer dissolved in cacodylate buffer (10-2 M, 15 % MPD) additives : 10-5 M sodium azide, 10-2 M MgCl2, 2.10-2 M spermine chloride. Reservoir: same solution but 50 % MPD, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 290K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'cacodylate buffer' ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'sodium azide' ? ? ? 1 4 1 MgCl2 ? ? ? 1 5 1 'spermine chloride' ? ? ? 1 6 2 'cacodylate buffer' ? ? ? 1 7 2 MPD ? ? ? 1 8 2 'sodium azide' ? ? ? 1 9 2 MgCl2 ? ? ? 1 10 2 'spermine chloride' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2006-11-10 _diffrn_detector.details 'Si(111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator '2 crystals - parallel beam - no focusing' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.3738 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID27' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID27 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.3738 # _reflns.entry_id 2PL4 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 4 _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 18 _reflns.number_all 5057 _reflns.number_obs 5057 _reflns.percent_possible_obs 94.1 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.2 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.75 _reflns_shell.percent_possible_all 86.2 _reflns_shell.Rmerge_I_obs 0.188 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 741 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2PL4 _refine.ls_number_reflns_obs 5057 _refine.ls_number_reflns_all 5057 _refine.pdbx_ls_sigma_I 4 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 94.4 _refine.ls_R_factor_obs 0.1693 _refine.ls_R_factor_all 0.1864 _refine.ls_R_factor_R_work 0.1675 _refine.ls_R_factor_R_free 0.201 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 402 _refine.ls_number_parameters 1595 _refine.ls_number_restraints 1594 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 2PKV _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model 'individual restrained B values' _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2PL4 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 184.00 _refine_analyze.occupancy_sum_non_hydrogen 397.00 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 322 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 75 _refine_hist.number_atoms_total 397 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.028 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0009 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.014 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.062 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2PL4 _pdbx_refine.R_factor_all_no_cutoff 0.1864 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1693 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 4203 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2PL4 _struct.title 'D-(GGTATACC) under 0.55 GPa hydrostatic pressure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PL4 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A DNA, HIGH-PRESSURE, CRYSTAL STUCTURE, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 1 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 1 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 1 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 2 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 2 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 2 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 3 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 3 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 4 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 4 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 5 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 5 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 6 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 6 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 7 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 7 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 7 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 8 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 8 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 8 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2PL4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2PL4 _atom_sites.fract_transf_matrix[1][1] 0.022878 _atom_sites.fract_transf_matrix[1][2] 0.013209 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026417 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024564 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 23.142 20.326 -9.768 1.00 36.26 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 24.115 19.424 -9.227 1.00 32.43 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 25.344 19.418 -10.115 1.00 26.50 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 25.761 20.792 -10.335 1.00 25.27 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 26.586 18.742 -9.580 1.00 25.41 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 26.603 17.352 -9.839 1.00 27.98 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 27.719 19.451 -10.321 1.00 20.24 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 27.181 20.873 -10.305 1.00 24.23 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 27.634 21.596 -9.096 1.00 26.41 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 26.874 21.965 -8.012 1.00 30.04 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 27.567 22.592 -7.102 1.00 27.21 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 28.853 22.636 -7.619 1.00 23.85 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 30.024 23.194 -7.070 1.00 19.44 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 30.170 23.777 -5.992 1.00 22.50 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 31.107 23.020 -7.920 1.00 18.96 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 31.078 22.390 -9.147 1.00 18.57 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 32.252 22.356 -9.765 1.00 19.92 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 29.986 21.861 -9.676 1.00 20.35 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 28.917 22.022 -8.857 1.00 29.33 ? 1 DG A C4 1 ATOM 20 P P . DG A 1 2 ? 27.298 16.346 -8.783 1.00 35.66 ? 2 DG A P 1 ATOM 21 O OP1 . DG A 1 2 ? 26.941 14.979 -9.221 1.00 40.06 ? 2 DG A OP1 1 ATOM 22 O OP2 . DG A 1 2 ? 26.978 16.874 -7.434 1.00 35.54 ? 2 DG A OP2 1 ATOM 23 O "O5'" . DG A 1 2 ? 28.870 16.535 -9.005 1.00 33.88 ? 2 DG A "O5'" 1 ATOM 24 C "C5'" . DG A 1 2 ? 29.464 16.369 -10.291 1.00 25.20 ? 2 DG A "C5'" 1 ATOM 25 C "C4'" . DG A 1 2 ? 30.863 16.923 -10.297 1.00 22.19 ? 2 DG A "C4'" 1 ATOM 26 O "O4'" . DG A 1 2 ? 30.849 18.345 -10.016 1.00 17.28 ? 2 DG A "O4'" 1 ATOM 27 C "C3'" . DG A 1 2 ? 31.791 16.342 -9.244 1.00 19.52 ? 2 DG A "C3'" 1 ATOM 28 O "O3'" . DG A 1 2 ? 32.372 15.134 -9.682 1.00 20.42 ? 2 DG A "O3'" 1 ATOM 29 C "C2'" . DG A 1 2 ? 32.829 17.420 -9.078 1.00 16.96 ? 2 DG A "C2'" 1 ATOM 30 C "C1'" . DG A 1 2 ? 32.014 18.681 -9.269 1.00 19.09 ? 2 DG A "C1'" 1 ATOM 31 N N9 . DG A 1 2 ? 31.581 19.298 -7.985 1.00 16.79 ? 2 DG A N9 1 ATOM 32 C C8 . DG A 1 2 ? 30.338 19.380 -7.411 1.00 20.12 ? 2 DG A C8 1 ATOM 33 N N7 . DG A 1 2 ? 30.354 20.009 -6.258 1.00 17.62 ? 2 DG A N7 1 ATOM 34 C C5 . DG A 1 2 ? 31.672 20.358 -6.065 1.00 17.75 ? 2 DG A C5 1 ATOM 35 C C6 . DG A 1 2 ? 32.312 21.056 -4.996 1.00 17.46 ? 2 DG A C6 1 ATOM 36 O O6 . DG A 1 2 ? 31.779 21.506 -3.987 1.00 19.06 ? 2 DG A O6 1 ATOM 37 N N1 . DG A 1 2 ? 33.681 21.213 -5.174 1.00 17.95 ? 2 DG A N1 1 ATOM 38 C C2 . DG A 1 2 ? 34.358 20.737 -6.280 1.00 20.64 ? 2 DG A C2 1 ATOM 39 N N2 . DG A 1 2 ? 35.670 20.966 -6.305 1.00 18.24 ? 2 DG A N2 1 ATOM 40 N N3 . DG A 1 2 ? 33.779 20.086 -7.281 1.00 18.79 ? 2 DG A N3 1 ATOM 41 C C4 . DG A 1 2 ? 32.455 19.928 -7.124 1.00 16.62 ? 2 DG A C4 1 ATOM 42 P P . DT A 1 3 ? 32.871 14.008 -8.667 1.00 25.81 ? 3 DT A P 1 ATOM 43 O OP1 . DT A 1 3 ? 33.216 12.798 -9.421 1.00 34.24 ? 3 DT A OP1 1 ATOM 44 O OP2 . DT A 1 3 ? 31.913 13.977 -7.528 1.00 24.56 ? 3 DT A OP2 1 ATOM 45 O "O5'" . DT A 1 3 ? 34.234 14.660 -8.124 1.00 23.10 ? 3 DT A "O5'" 1 ATOM 46 C "C5'" . DT A 1 3 ? 35.452 14.630 -8.868 1.00 27.90 ? 3 DT A "C5'" 1 ATOM 47 C "C4'" . DT A 1 3 ? 36.531 15.265 -8.040 1.00 25.25 ? 3 DT A "C4'" 1 ATOM 48 O "O4'" . DT A 1 3 ? 36.149 16.630 -7.712 1.00 21.72 ? 3 DT A "O4'" 1 ATOM 49 C "C3'" . DT A 1 3 ? 36.794 14.631 -6.690 1.00 25.04 ? 3 DT A "C3'" 1 ATOM 50 O "O3'" . DT A 1 3 ? 37.500 13.402 -6.780 1.00 34.32 ? 3 DT A "O3'" 1 ATOM 51 C "C2'" . DT A 1 3 ? 37.590 15.748 -6.038 1.00 21.46 ? 3 DT A "C2'" 1 ATOM 52 C "C1'" . DT A 1 3 ? 36.788 16.945 -6.461 1.00 22.40 ? 3 DT A "C1'" 1 ATOM 53 N N1 . DT A 1 3 ? 35.698 17.333 -5.532 1.00 24.66 ? 3 DT A N1 1 ATOM 54 C C2 . DT A 1 3 ? 36.038 18.162 -4.473 1.00 17.29 ? 3 DT A C2 1 ATOM 55 O O2 . DT A 1 3 ? 37.170 18.554 -4.308 1.00 19.04 ? 3 DT A O2 1 ATOM 56 N N3 . DT A 1 3 ? 34.969 18.463 -3.678 1.00 17.59 ? 3 DT A N3 1 ATOM 57 C C4 . DT A 1 3 ? 33.670 18.048 -3.816 1.00 17.48 ? 3 DT A C4 1 ATOM 58 O O4 . DT A 1 3 ? 32.825 18.415 -3.003 1.00 20.48 ? 3 DT A O4 1 ATOM 59 C C5 . DT A 1 3 ? 33.387 17.183 -4.948 1.00 18.39 ? 3 DT A C5 1 ATOM 60 C C7 . DT A 1 3 ? 31.990 16.684 -5.169 1.00 20.32 ? 3 DT A C7 1 ATOM 61 C C6 . DT A 1 3 ? 34.421 16.884 -5.729 1.00 16.08 ? 3 DT A C6 1 ATOM 62 P P . DA A 1 4 ? 37.381 12.391 -5.520 1.00 33.33 ? 4 DA A P 1 ATOM 63 O OP1 . DA A 1 4 ? 38.246 11.237 -5.802 1.00 38.37 ? 4 DA A OP1 1 ATOM 64 O OP2 . DA A 1 4 ? 35.943 12.264 -5.188 1.00 27.31 ? 4 DA A OP2 1 ATOM 65 O "O5'" . DA A 1 4 ? 38.047 13.234 -4.327 1.00 26.11 ? 4 DA A "O5'" 1 ATOM 66 C "C5'" . DA A 1 4 ? 39.451 13.464 -4.276 1.00 21.00 ? 4 DA A "C5'" 1 ATOM 67 C "C4'" . DA A 1 4 ? 39.797 14.408 -3.147 1.00 17.25 ? 4 DA A "C4'" 1 ATOM 68 O "O4'" . DA A 1 4 ? 39.006 15.614 -3.168 1.00 19.14 ? 4 DA A "O4'" 1 ATOM 69 C "C3'" . DA A 1 4 ? 39.532 13.846 -1.752 1.00 21.03 ? 4 DA A "C3'" 1 ATOM 70 O "O3'" . DA A 1 4 ? 40.576 12.959 -1.404 1.00 21.37 ? 4 DA A "O3'" 1 ATOM 71 C "C2'" . DA A 1 4 ? 39.467 15.088 -0.905 1.00 21.04 ? 4 DA A "C2'" 1 ATOM 72 C "C1'" . DA A 1 4 ? 38.744 16.049 -1.837 1.00 19.64 ? 4 DA A "C1'" 1 ATOM 73 N N9 . DA A 1 4 ? 37.275 16.087 -1.677 1.00 15.31 ? 4 DA A N9 1 ATOM 74 C C8 . DA A 1 4 ? 36.316 15.465 -2.440 1.00 13.07 ? 4 DA A C8 1 ATOM 75 N N7 . DA A 1 4 ? 35.096 15.702 -2.034 1.00 15.85 ? 4 DA A N7 1 ATOM 76 C C5 . DA A 1 4 ? 35.280 16.537 -0.929 1.00 20.93 ? 4 DA A C5 1 ATOM 77 C C6 . DA A 1 4 ? 34.373 17.143 -0.044 1.00 14.69 ? 4 DA A C6 1 ATOM 78 N N6 . DA A 1 4 ? 33.063 16.995 -0.148 1.00 14.19 ? 4 DA A N6 1 ATOM 79 N N1 . DA A 1 4 ? 34.868 17.911 0.950 1.00 15.19 ? 4 DA A N1 1 ATOM 80 C C2 . DA A 1 4 ? 36.179 18.035 1.019 1.00 14.32 ? 4 DA A C2 1 ATOM 81 N N3 . DA A 1 4 ? 37.165 17.537 0.279 1.00 19.52 ? 4 DA A N3 1 ATOM 82 C C4 . DA A 1 4 ? 36.615 16.781 -0.700 1.00 20.45 ? 4 DA A C4 1 ATOM 83 P P . DT A 1 5 ? 40.349 11.778 -0.375 1.00 21.48 ? 5 DT A P 1 ATOM 84 O OP1 . DT A 1 5 ? 41.643 11.051 -0.318 1.00 25.69 ? 5 DT A OP1 1 ATOM 85 O OP2 . DT A 1 5 ? 39.129 11.025 -0.737 1.00 21.66 ? 5 DT A OP2 1 ATOM 86 O "O5'" . DT A 1 5 ? 40.059 12.515 1.013 1.00 18.11 ? 5 DT A "O5'" 1 ATOM 87 C "C5'" . DT A 1 5 ? 41.090 13.204 1.723 1.00 16.86 ? 5 DT A "C5'" 1 ATOM 88 C "C4'" . DT A 1 5 ? 40.539 14.052 2.826 1.00 17.49 ? 5 DT A "C4'" 1 ATOM 89 O "O4'" . DT A 1 5 ? 39.621 15.052 2.345 1.00 18.91 ? 5 DT A "O4'" 1 ATOM 90 C "C3'" . DT A 1 5 ? 39.707 13.281 3.866 1.00 19.42 ? 5 DT A "C3'" 1 ATOM 91 O "O3'" . DT A 1 5 ? 40.579 12.554 4.720 1.00 18.98 ? 5 DT A "O3'" 1 ATOM 92 C "C2'" . DT A 1 5 ? 38.929 14.396 4.504 1.00 14.67 ? 5 DT A "C2'" 1 ATOM 93 C "C1'" . DT A 1 5 ? 38.593 15.265 3.294 1.00 21.29 ? 5 DT A "C1'" 1 ATOM 94 N N1 . DT A 1 5 ? 37.282 14.918 2.703 1.00 16.03 ? 5 DT A N1 1 ATOM 95 C C2 . DT A 1 5 ? 36.177 15.549 3.216 1.00 18.79 ? 5 DT A C2 1 ATOM 96 O O2 . DT A 1 5 ? 36.207 16.367 4.114 1.00 21.88 ? 5 DT A O2 1 ATOM 97 N N3 . DT A 1 5 ? 34.997 15.194 2.640 1.00 18.51 ? 5 DT A N3 1 ATOM 98 C C4 . DT A 1 5 ? 34.802 14.294 1.627 1.00 14.45 ? 5 DT A C4 1 ATOM 99 O O4 . DT A 1 5 ? 33.642 14.125 1.258 1.00 16.16 ? 5 DT A O4 1 ATOM 100 C C5 . DT A 1 5 ? 35.999 13.668 1.138 1.00 14.16 ? 5 DT A C5 1 ATOM 101 C C7 . DT A 1 5 ? 35.871 12.672 0.033 1.00 15.63 ? 5 DT A C7 1 ATOM 102 C C6 . DT A 1 5 ? 37.178 13.989 1.680 1.00 17.01 ? 5 DT A C6 1 ATOM 103 P P . DA A 1 6 ? 40.060 11.296 5.557 1.00 24.01 ? 6 DA A P 1 ATOM 104 O OP1 . DA A 1 6 ? 41.241 10.653 6.173 1.00 24.07 ? 6 DA A OP1 1 ATOM 105 O OP2 . DA A 1 6 ? 39.158 10.462 4.718 1.00 24.47 ? 6 DA A OP2 1 ATOM 106 O "O5'" . DA A 1 6 ? 39.153 11.958 6.669 1.00 22.09 ? 6 DA A "O5'" 1 ATOM 107 C "C5'" . DA A 1 6 ? 39.717 12.749 7.723 1.00 20.32 ? 6 DA A "C5'" 1 ATOM 108 C "C4'" . DA A 1 6 ? 38.568 13.211 8.597 1.00 21.75 ? 6 DA A "C4'" 1 ATOM 109 O "O4'" . DA A 1 6 ? 37.740 14.131 7.844 1.00 19.88 ? 6 DA A "O4'" 1 ATOM 110 C "C3'" . DA A 1 6 ? 37.627 12.127 9.063 1.00 25.63 ? 6 DA A "C3'" 1 ATOM 111 O "O3'" . DA A 1 6 ? 38.090 11.504 10.258 1.00 43.32 ? 6 DA A "O3'" 1 ATOM 112 C "C2'" . DA A 1 6 ? 36.336 12.878 9.282 1.00 19.03 ? 6 DA A "C2'" 1 ATOM 113 C "C1'" . DA A 1 6 ? 36.388 13.936 8.210 1.00 20.92 ? 6 DA A "C1'" 1 ATOM 114 N N9 . DA A 1 6 ? 35.625 13.519 7.009 1.00 18.23 ? 6 DA A N9 1 ATOM 115 C C8 . DA A 1 6 ? 36.020 12.821 5.911 1.00 19.40 ? 6 DA A C8 1 ATOM 116 N N7 . DA A 1 6 ? 35.039 12.649 5.051 1.00 13.79 ? 6 DA A N7 1 ATOM 117 C C5 . DA A 1 6 ? 33.943 13.267 5.613 1.00 11.21 ? 6 DA A C5 1 ATOM 118 C C6 . DA A 1 6 ? 32.605 13.464 5.255 1.00 14.12 ? 6 DA A C6 1 ATOM 119 N N6 . DA A 1 6 ? 32.080 12.999 4.095 1.00 22.71 ? 6 DA A N6 1 ATOM 120 N N1 . DA A 1 6 ? 31.790 14.140 6.083 1.00 17.86 ? 6 DA A N1 1 ATOM 121 C C2 . DA A 1 6 ? 32.279 14.611 7.239 1.00 17.79 ? 6 DA A C2 1 ATOM 122 N N3 . DA A 1 6 ? 33.522 14.492 7.690 1.00 16.46 ? 6 DA A N3 1 ATOM 123 C C4 . DA A 1 6 ? 34.300 13.817 6.845 1.00 16.44 ? 6 DA A C4 1 ATOM 124 P P . DC A 1 7 ? 37.493 10.087 10.731 1.00 41.02 ? 7 DC A P 1 ATOM 125 O OP1 . DC A 1 7 ? 38.217 9.709 11.963 1.00 38.16 ? 7 DC A OP1 1 ATOM 126 O OP2 . DC A 1 7 ? 37.476 9.164 9.558 1.00 41.88 ? 7 DC A OP2 1 ATOM 127 O "O5'" . DC A 1 7 ? 35.971 10.380 11.084 1.00 36.11 ? 7 DC A "O5'" 1 ATOM 128 C "C5'" . DC A 1 7 ? 35.536 11.191 12.170 1.00 22.31 ? 7 DC A "C5'" 1 ATOM 129 C "C4'" . DC A 1 7 ? 34.055 11.443 12.068 1.00 18.83 ? 7 DC A "C4'" 1 ATOM 130 O "O4'" . DC A 1 7 ? 33.820 11.996 10.739 1.00 17.28 ? 7 DC A "O4'" 1 ATOM 131 C "C3'" . DC A 1 7 ? 33.081 10.284 12.124 1.00 21.40 ? 7 DC A "C3'" 1 ATOM 132 O "O3'" . DC A 1 7 ? 32.769 9.916 13.460 1.00 23.38 ? 7 DC A "O3'" 1 ATOM 133 C "C2'" . DC A 1 7 ? 31.859 10.815 11.384 1.00 15.17 ? 7 DC A "C2'" 1 ATOM 134 C "C1'" . DC A 1 7 ? 32.464 11.741 10.376 1.00 12.72 ? 7 DC A "C1'" 1 ATOM 135 N N1 . DC A 1 7 ? 32.534 11.195 8.984 1.00 14.79 ? 7 DC A N1 1 ATOM 136 C C2 . DC A 1 7 ? 31.402 11.310 8.191 1.00 15.19 ? 7 DC A C2 1 ATOM 137 O O2 . DC A 1 7 ? 30.408 11.848 8.664 1.00 15.12 ? 7 DC A O2 1 ATOM 138 N N3 . DC A 1 7 ? 31.442 10.823 6.914 1.00 13.11 ? 7 DC A N3 1 ATOM 139 C C4 . DC A 1 7 ? 32.565 10.251 6.490 1.00 10.31 ? 7 DC A C4 1 ATOM 140 N N4 . DC A 1 7 ? 32.565 9.778 5.219 1.00 15.30 ? 7 DC A N4 1 ATOM 141 C C5 . DC A 1 7 ? 33.735 10.124 7.284 1.00 20.66 ? 7 DC A C5 1 ATOM 142 C C6 . DC A 1 7 ? 33.671 10.615 8.542 1.00 14.41 ? 7 DC A C6 1 ATOM 143 P P . DC A 1 8 ? 32.487 8.383 13.818 1.00 23.25 ? 8 DC A P 1 ATOM 144 O OP1 . DC A 1 8 ? 32.364 8.304 15.313 1.00 26.59 ? 8 DC A OP1 1 ATOM 145 O OP2 . DC A 1 8 ? 33.476 7.541 13.138 1.00 17.61 ? 8 DC A OP2 1 ATOM 146 O "O5'" . DC A 1 8 ? 31.046 8.091 13.250 1.00 18.72 ? 8 DC A "O5'" 1 ATOM 147 C "C5'" . DC A 1 8 ? 29.893 8.755 13.778 1.00 19.81 ? 8 DC A "C5'" 1 ATOM 148 C "C4'" . DC A 1 8 ? 28.706 8.338 12.970 1.00 23.37 ? 8 DC A "C4'" 1 ATOM 149 O "O4'" . DC A 1 8 ? 28.800 9.021 11.678 1.00 19.86 ? 8 DC A "O4'" 1 ATOM 150 C "C3'" . DC A 1 8 ? 28.586 6.884 12.594 1.00 23.54 ? 8 DC A "C3'" 1 ATOM 151 O "O3'" . DC A 1 8 ? 28.052 6.093 13.645 1.00 21.56 ? 8 DC A "O3'" 1 ATOM 152 C "C2'" . DC A 1 8 ? 27.648 6.958 11.405 1.00 21.90 ? 8 DC A "C2'" 1 ATOM 153 C "C1'" . DC A 1 8 ? 28.003 8.287 10.773 1.00 15.93 ? 8 DC A "C1'" 1 ATOM 154 N N1 . DC A 1 8 ? 28.785 8.099 9.531 1.00 15.76 ? 8 DC A N1 1 ATOM 155 C C2 . DC A 1 8 ? 28.077 7.975 8.331 1.00 20.93 ? 8 DC A C2 1 ATOM 156 O O2 . DC A 1 8 ? 26.854 8.036 8.397 1.00 21.52 ? 8 DC A O2 1 ATOM 157 N N3 . DC A 1 8 ? 28.768 7.803 7.182 1.00 14.36 ? 8 DC A N3 1 ATOM 158 C C4 . DC A 1 8 ? 30.090 7.750 7.213 1.00 14.51 ? 8 DC A C4 1 ATOM 159 N N4 . DC A 1 8 ? 30.758 7.576 6.064 1.00 16.49 ? 8 DC A N4 1 ATOM 160 C C5 . DC A 1 8 ? 30.843 7.870 8.430 1.00 15.16 ? 8 DC A C5 1 ATOM 161 C C6 . DC A 1 8 ? 30.140 8.043 9.546 1.00 14.39 ? 8 DC A C6 1 ATOM 162 O "O5'" . DG B 1 1 ? 25.443 6.668 -2.078 1.00 63.61 ? 1 DG B "O5'" 1 ATOM 163 C "C5'" . DG B 1 1 ? 24.027 6.763 -2.331 1.00 43.66 ? 1 DG B "C5'" 1 ATOM 164 C "C4'" . DG B 1 1 ? 23.289 6.704 -1.011 1.00 34.60 ? 1 DG B "C4'" 1 ATOM 165 O "O4'" . DG B 1 1 ? 23.769 5.632 -0.156 1.00 29.26 ? 1 DG B "O4'" 1 ATOM 166 C "C3'" . DG B 1 1 ? 23.450 7.961 -0.182 1.00 32.06 ? 1 DG B "C3'" 1 ATOM 167 O "O3'" . DG B 1 1 ? 22.557 8.982 -0.612 1.00 41.93 ? 1 DG B "O3'" 1 ATOM 168 C "C2'" . DG B 1 1 ? 23.165 7.453 1.222 1.00 20.21 ? 1 DG B "C2'" 1 ATOM 169 C "C1'" . DG B 1 1 ? 23.895 6.121 1.169 1.00 20.06 ? 1 DG B "C1'" 1 ATOM 170 N N9 . DG B 1 1 ? 25.310 6.299 1.508 1.00 20.78 ? 1 DG B N9 1 ATOM 171 C C8 . DG B 1 1 ? 26.398 6.132 0.685 1.00 20.44 ? 1 DG B C8 1 ATOM 172 N N7 . DG B 1 1 ? 27.529 6.367 1.284 1.00 23.31 ? 1 DG B N7 1 ATOM 173 C C5 . DG B 1 1 ? 27.149 6.710 2.586 1.00 12.98 ? 1 DG B C5 1 ATOM 174 C C6 . DG B 1 1 ? 27.971 7.066 3.676 1.00 12.38 ? 1 DG B C6 1 ATOM 175 O O6 . DG B 1 1 ? 29.183 7.145 3.705 1.00 18.78 ? 1 DG B O6 1 ATOM 176 N N1 . DG B 1 1 ? 27.197 7.335 4.799 1.00 15.29 ? 1 DG B N1 1 ATOM 177 C C2 . DG B 1 1 ? 25.825 7.271 4.856 1.00 24.83 ? 1 DG B C2 1 ATOM 178 N N2 . DG B 1 1 ? 25.239 7.569 6.039 1.00 20.89 ? 1 DG B N2 1 ATOM 179 N N3 . DG B 1 1 ? 25.037 6.939 3.838 1.00 18.82 ? 1 DG B N3 1 ATOM 180 C C4 . DG B 1 1 ? 25.792 6.674 2.741 1.00 18.40 ? 1 DG B C4 1 ATOM 181 P P . DG B 1 2 ? 23.101 10.471 -0.798 1.00 29.86 ? 2 DG B P 1 ATOM 182 O OP1 . DG B 1 2 ? 22.119 11.264 -1.567 1.00 50.08 ? 2 DG B OP1 1 ATOM 183 O OP2 . DG B 1 2 ? 24.532 10.336 -1.222 1.00 24.55 ? 2 DG B OP2 1 ATOM 184 O "O5'" . DG B 1 2 ? 23.163 11.091 0.665 1.00 24.41 ? 2 DG B "O5'" 1 ATOM 185 C "C5'" . DG B 1 2 ? 22.038 11.441 1.448 1.00 31.03 ? 2 DG B "C5'" 1 ATOM 186 C "C4'" . DG B 1 2 ? 22.311 11.251 2.906 1.00 28.35 ? 2 DG B "C4'" 1 ATOM 187 O "O4'" . DG B 1 2 ? 23.179 10.136 3.162 1.00 23.77 ? 2 DG B "O4'" 1 ATOM 188 C "C3'" . DG B 1 2 ? 23.011 12.476 3.497 1.00 21.63 ? 2 DG B "C3'" 1 ATOM 189 O "O3'" . DG B 1 2 ? 22.040 13.481 3.740 1.00 23.03 ? 2 DG B "O3'" 1 ATOM 190 C "C2'" . DG B 1 2 ? 23.677 11.891 4.715 1.00 18.97 ? 2 DG B "C2'" 1 ATOM 191 C "C1'" . DG B 1 2 ? 24.037 10.491 4.244 1.00 20.90 ? 2 DG B "C1'" 1 ATOM 192 N N9 . DG B 1 2 ? 25.434 10.382 3.760 1.00 19.95 ? 2 DG B N9 1 ATOM 193 C C8 . DG B 1 2 ? 25.898 10.098 2.509 1.00 15.33 ? 2 DG B C8 1 ATOM 194 N N7 . DG B 1 2 ? 27.203 10.081 2.434 1.00 16.60 ? 2 DG B N7 1 ATOM 195 C C5 . DG B 1 2 ? 27.622 10.377 3.733 1.00 17.83 ? 2 DG B C5 1 ATOM 196 C C6 . DG B 1 2 ? 28.926 10.496 4.260 1.00 16.71 ? 2 DG B C6 1 ATOM 197 O O6 . DG B 1 2 ? 30.012 10.369 3.699 1.00 15.40 ? 2 DG B O6 1 ATOM 198 N N1 . DG B 1 2 ? 28.913 10.805 5.627 1.00 15.05 ? 2 DG B N1 1 ATOM 199 C C2 . DG B 1 2 ? 27.767 10.971 6.355 1.00 19.99 ? 2 DG B C2 1 ATOM 200 N N2 . DG B 1 2 ? 27.976 11.267 7.657 1.00 15.20 ? 2 DG B N2 1 ATOM 201 N N3 . DG B 1 2 ? 26.540 10.862 5.878 1.00 16.19 ? 2 DG B N3 1 ATOM 202 C C4 . DG B 1 2 ? 26.542 10.564 4.559 1.00 19.66 ? 2 DG B C4 1 ATOM 203 P P . DT B 1 3 ? 22.381 15.039 3.693 1.00 30.24 ? 3 DT B P 1 ATOM 204 O OP1 . DT B 1 3 ? 21.104 15.776 3.862 1.00 36.14 ? 3 DT B OP1 1 ATOM 205 O OP2 . DT B 1 3 ? 23.274 15.316 2.546 1.00 24.25 ? 3 DT B OP2 1 ATOM 206 O "O5'" . DT B 1 3 ? 23.248 15.246 5.020 1.00 27.64 ? 3 DT B "O5'" 1 ATOM 207 C "C5'" . DT B 1 3 ? 22.721 15.000 6.327 1.00 32.98 ? 3 DT B "C5'" 1 ATOM 208 C "C4'" . DT B 1 3 ? 23.811 15.285 7.335 1.00 33.51 ? 3 DT B "C4'" 1 ATOM 209 O "O4'" . DT B 1 3 ? 24.817 14.245 7.224 1.00 25.90 ? 3 DT B "O4'" 1 ATOM 210 C "C3'" . DT B 1 3 ? 24.566 16.577 7.151 1.00 40.52 ? 3 DT B "C3'" 1 ATOM 211 O "O3'" . DT B 1 3 ? 23.942 17.693 7.797 1.00 38.91 ? 3 DT B "O3'" 1 ATOM 212 C "C2'" . DT B 1 3 ? 25.915 16.294 7.774 1.00 37.73 ? 3 DT B "C2'" 1 ATOM 213 C "C1'" . DT B 1 3 ? 26.083 14.815 7.542 1.00 30.10 ? 3 DT B "C1'" 1 ATOM 214 N N1 . DT B 1 3 ? 26.973 14.496 6.400 1.00 20.74 ? 3 DT B N1 1 ATOM 215 C C2 . DT B 1 3 ? 28.312 14.385 6.667 1.00 23.86 ? 3 DT B C2 1 ATOM 216 O O2 . DT B 1 3 ? 28.769 14.538 7.798 1.00 25.10 ? 3 DT B O2 1 ATOM 217 N N3 . DT B 1 3 ? 29.076 14.088 5.568 1.00 18.86 ? 3 DT B N3 1 ATOM 218 C C4 . DT B 1 3 ? 28.625 13.904 4.279 1.00 15.20 ? 3 DT B C4 1 ATOM 219 O O4 . DT B 1 3 ? 29.451 13.644 3.409 1.00 16.98 ? 3 DT B O4 1 ATOM 220 C C5 . DT B 1 3 ? 27.205 14.042 4.087 1.00 20.17 ? 3 DT B C5 1 ATOM 221 C C7 . DT B 1 3 ? 26.633 13.859 2.719 1.00 25.19 ? 3 DT B C7 1 ATOM 222 C C6 . DT B 1 3 ? 26.434 14.331 5.148 1.00 21.51 ? 3 DT B C6 1 ATOM 223 P P . DA B 1 4 ? 24.145 19.086 7.002 1.00 54.56 ? 4 DA B P 1 ATOM 224 O OP1 . DA B 1 4 ? 23.715 20.181 7.898 1.00 67.53 ? 4 DA B OP1 1 ATOM 225 O OP2 . DA B 1 4 ? 23.566 18.919 5.646 1.00 68.35 ? 4 DA B OP2 1 ATOM 226 O "O5'" . DA B 1 4 ? 25.735 19.157 6.821 1.00 55.11 ? 4 DA B "O5'" 1 ATOM 227 C "C5'" . DA B 1 4 ? 26.460 20.188 7.478 1.00 37.66 ? 4 DA B "C5'" 1 ATOM 228 C "C4'" . DA B 1 4 ? 27.833 19.786 7.916 1.00 23.33 ? 4 DA B "C4'" 1 ATOM 229 O "O4'" . DA B 1 4 ? 28.211 18.430 7.610 1.00 16.37 ? 4 DA B "O4'" 1 ATOM 230 C "C3'" . DA B 1 4 ? 28.889 20.633 7.196 1.00 17.87 ? 4 DA B "C3'" 1 ATOM 231 O "O3'" . DA B 1 4 ? 28.877 21.938 7.757 1.00 23.42 ? 4 DA B "O3'" 1 ATOM 232 C "C2'" . DA B 1 4 ? 30.147 19.828 7.409 1.00 16.14 ? 4 DA B "C2'" 1 ATOM 233 C "C1'" . DA B 1 4 ? 29.605 18.419 7.311 1.00 19.43 ? 4 DA B "C1'" 1 ATOM 234 N N9 . DA B 1 4 ? 29.676 17.775 5.961 1.00 16.27 ? 4 DA B N9 1 ATOM 235 C C8 . DA B 1 4 ? 28.661 17.487 5.100 1.00 17.99 ? 4 DA B C8 1 ATOM 236 N N7 . DA B 1 4 ? 29.081 16.913 3.988 1.00 19.34 ? 4 DA B N7 1 ATOM 237 C C5 . DA B 1 4 ? 30.455 16.827 4.159 1.00 24.08 ? 4 DA B C5 1 ATOM 238 C C6 . DA B 1 4 ? 31.496 16.324 3.360 1.00 17.89 ? 4 DA B C6 1 ATOM 239 N N6 . DA B 1 4 ? 31.335 15.773 2.152 1.00 14.80 ? 4 DA B N6 1 ATOM 240 N N1 . DA B 1 4 ? 32.752 16.396 3.832 1.00 16.87 ? 4 DA B N1 1 ATOM 241 C C2 . DA B 1 4 ? 32.980 16.937 5.033 1.00 21.99 ? 4 DA B C2 1 ATOM 242 N N3 . DA B 1 4 ? 32.074 17.447 5.880 1.00 19.31 ? 4 DA B N3 1 ATOM 243 C C4 . DA B 1 4 ? 30.836 17.360 5.383 1.00 16.30 ? 4 DA B C4 1 ATOM 244 P P . DT B 1 5 ? 29.209 23.233 6.868 1.00 27.02 ? 5 DT B P 1 ATOM 245 O OP1 . DT B 1 5 ? 28.860 24.427 7.668 1.00 28.23 ? 5 DT B OP1 1 ATOM 246 O OP2 . DT B 1 5 ? 28.577 23.012 5.539 1.00 23.62 ? 5 DT B OP2 1 ATOM 247 O "O5'" . DT B 1 5 ? 30.762 23.135 6.691 1.00 25.93 ? 5 DT B "O5'" 1 ATOM 248 C "C5'" . DT B 1 5 ? 31.700 23.213 7.767 1.00 27.71 ? 5 DT B "C5'" 1 ATOM 249 C "C4'" . DT B 1 5 ? 33.050 22.901 7.201 1.00 21.45 ? 5 DT B "C4'" 1 ATOM 250 O "O4'" . DT B 1 5 ? 33.083 21.528 6.777 1.00 22.54 ? 5 DT B "O4'" 1 ATOM 251 C "C3'" . DT B 1 5 ? 33.436 23.664 5.935 1.00 29.11 ? 5 DT B "C3'" 1 ATOM 252 O "O3'" . DT B 1 5 ? 33.767 25.010 6.237 1.00 35.26 ? 5 DT B "O3'" 1 ATOM 253 C "C2'" . DT B 1 5 ? 34.574 22.791 5.454 1.00 29.94 ? 5 DT B "C2'" 1 ATOM 254 C "C1'" . DT B 1 5 ? 34.011 21.406 5.697 1.00 29.78 ? 5 DT B "C1'" 1 ATOM 255 N N1 . DT B 1 5 ? 33.263 20.780 4.563 1.00 19.44 ? 5 DT B N1 1 ATOM 256 C C2 . DT B 1 5 ? 34.015 20.008 3.701 1.00 19.98 ? 5 DT B C2 1 ATOM 257 O O2 . DT B 1 5 ? 35.217 19.854 3.854 1.00 26.22 ? 5 DT B O2 1 ATOM 258 N N3 . DT B 1 5 ? 33.295 19.445 2.670 1.00 19.46 ? 5 DT B N3 1 ATOM 259 C C4 . DT B 1 5 ? 31.949 19.559 2.413 1.00 15.99 ? 5 DT B C4 1 ATOM 260 O O4 . DT B 1 5 ? 31.471 18.984 1.444 1.00 17.18 ? 5 DT B O4 1 ATOM 261 C C5 . DT B 1 5 ? 31.222 20.380 3.362 1.00 18.32 ? 5 DT B C5 1 ATOM 262 C C7 . DT B 1 5 ? 29.757 20.586 3.201 1.00 20.28 ? 5 DT B C7 1 ATOM 263 C C6 . DT B 1 5 ? 31.918 20.936 4.373 1.00 18.42 ? 5 DT B C6 1 ATOM 264 P P . DA B 1 6 ? 33.833 26.141 5.095 1.00 37.79 ? 6 DA B P 1 ATOM 265 O OP1 . DA B 1 6 ? 34.251 27.404 5.745 1.00 36.66 ? 6 DA B OP1 1 ATOM 266 O OP2 . DA B 1 6 ? 32.618 26.058 4.247 1.00 44.95 ? 6 DA B OP2 1 ATOM 267 O "O5'" . DA B 1 6 ? 35.051 25.615 4.210 1.00 30.53 ? 6 DA B "O5'" 1 ATOM 268 C "C5'" . DA B 1 6 ? 36.384 25.691 4.731 1.00 24.64 ? 6 DA B "C5'" 1 ATOM 269 C "C4'" . DA B 1 6 ? 37.308 25.063 3.719 1.00 24.23 ? 6 DA B "C4'" 1 ATOM 270 O "O4'" . DA B 1 6 ? 36.876 23.683 3.569 1.00 30.24 ? 6 DA B "O4'" 1 ATOM 271 C "C3'" . DA B 1 6 ? 37.309 25.580 2.297 1.00 29.34 ? 6 DA B "C3'" 1 ATOM 272 O "O3'" . DA B 1 6 ? 38.126 26.725 2.117 1.00 26.73 ? 6 DA B "O3'" 1 ATOM 273 C "C2'" . DA B 1 6 ? 37.854 24.377 1.548 1.00 29.38 ? 6 DA B "C2'" 1 ATOM 274 C "C1'" . DA B 1 6 ? 37.224 23.217 2.271 1.00 31.11 ? 6 DA B "C1'" 1 ATOM 275 N N9 . DA B 1 6 ? 35.993 22.700 1.615 1.00 22.61 ? 6 DA B N9 1 ATOM 276 C C8 . DA B 1 6 ? 34.674 22.938 1.865 1.00 20.98 ? 6 DA B C8 1 ATOM 277 N N7 . DA B 1 6 ? 33.860 22.296 1.071 1.00 26.67 ? 6 DA B N7 1 ATOM 278 C C5 . DA B 1 6 ? 34.728 21.594 0.242 1.00 27.89 ? 6 DA B C5 1 ATOM 279 C C6 . DA B 1 6 ? 34.492 20.708 -0.839 1.00 16.30 ? 6 DA B C6 1 ATOM 280 N N6 . DA B 1 6 ? 33.230 20.472 -1.156 1.00 19.33 ? 6 DA B N6 1 ATOM 281 N N1 . DA B 1 6 ? 35.556 20.182 -1.446 1.00 16.54 ? 6 DA B N1 1 ATOM 282 C C2 . DA B 1 6 ? 36.795 20.487 -1.049 1.00 23.03 ? 6 DA B C2 1 ATOM 283 N N3 . DA B 1 6 ? 37.136 21.307 -0.046 1.00 21.90 ? 6 DA B N3 1 ATOM 284 C C4 . DA B 1 6 ? 36.042 21.819 0.548 1.00 24.91 ? 6 DA B C4 1 ATOM 285 P P . DC B 1 7 ? 37.937 27.749 0.889 1.00 28.11 ? 7 DC B P 1 ATOM 286 O OP1 . DC B 1 7 ? 38.965 28.800 1.046 1.00 26.67 ? 7 DC B OP1 1 ATOM 287 O OP2 . DC B 1 7 ? 36.498 28.107 0.805 1.00 33.45 ? 7 DC B OP2 1 ATOM 288 O "O5'" . DC B 1 7 ? 38.317 26.857 -0.395 1.00 22.72 ? 7 DC B "O5'" 1 ATOM 289 C "C5'" . DC B 1 7 ? 39.633 26.375 -0.611 1.00 21.86 ? 7 DC B "C5'" 1 ATOM 290 C "C4'" . DC B 1 7 ? 39.798 25.448 -1.781 1.00 25.04 ? 7 DC B "C4'" 1 ATOM 291 O "O4'" . DC B 1 7 ? 39.070 24.203 -1.531 1.00 25.77 ? 7 DC B "O4'" 1 ATOM 292 C "C3'" . DC B 1 7 ? 39.254 25.899 -3.140 1.00 17.49 ? 7 DC B "C3'" 1 ATOM 293 O "O3'" . DC B 1 7 ? 40.160 26.738 -3.818 1.00 21.55 ? 7 DC B "O3'" 1 ATOM 294 C "C2'" . DC B 1 7 ? 39.049 24.585 -3.858 1.00 12.13 ? 7 DC B "C2'" 1 ATOM 295 C "C1'" . DC B 1 7 ? 38.531 23.693 -2.763 1.00 19.38 ? 7 DC B "C1'" 1 ATOM 296 N N1 . DC B 1 7 ? 37.071 23.687 -2.611 1.00 16.36 ? 7 DC B N1 1 ATOM 297 C C2 . DC B 1 7 ? 36.314 22.800 -3.377 1.00 16.87 ? 7 DC B C2 1 ATOM 298 O O2 . DC B 1 7 ? 36.949 22.062 -4.144 1.00 17.26 ? 7 DC B O2 1 ATOM 299 N N3 . DC B 1 7 ? 34.975 22.814 -3.224 1.00 17.48 ? 7 DC B N3 1 ATOM 300 C C4 . DC B 1 7 ? 34.380 23.651 -2.359 1.00 16.68 ? 7 DC B C4 1 ATOM 301 N N4 . DC B 1 7 ? 33.050 23.636 -2.235 1.00 21.24 ? 7 DC B N4 1 ATOM 302 C C5 . DC B 1 7 ? 35.134 24.575 -1.565 1.00 15.32 ? 7 DC B C5 1 ATOM 303 C C6 . DC B 1 7 ? 36.455 24.545 -1.738 1.00 18.07 ? 7 DC B C6 1 ATOM 304 P P . DC B 1 8 ? 39.683 27.654 -5.067 1.00 21.64 ? 8 DC B P 1 ATOM 305 O OP1 . DC B 1 8 ? 40.906 28.383 -5.487 1.00 23.14 ? 8 DC B OP1 1 ATOM 306 O OP2 . DC B 1 8 ? 38.455 28.386 -4.704 1.00 16.43 ? 8 DC B OP2 1 ATOM 307 O "O5'" . DC B 1 8 ? 39.301 26.579 -6.171 1.00 26.80 ? 8 DC B "O5'" 1 ATOM 308 C "C5'" . DC B 1 8 ? 39.989 26.190 -7.347 1.00 30.64 ? 8 DC B "C5'" 1 ATOM 309 C "C4'" . DC B 1 8 ? 39.201 25.170 -8.135 1.00 19.14 ? 8 DC B "C4'" 1 ATOM 310 O "O4'" . DC B 1 8 ? 38.264 24.387 -7.374 1.00 19.38 ? 8 DC B "O4'" 1 ATOM 311 C "C3'" . DC B 1 8 ? 38.362 25.889 -9.196 1.00 15.66 ? 8 DC B "C3'" 1 ATOM 312 O "O3'" . DC B 1 8 ? 39.128 25.975 -10.391 1.00 25.67 ? 8 DC B "O3'" 1 ATOM 313 C "C2'" . DC B 1 8 ? 37.095 25.085 -9.355 1.00 16.20 ? 8 DC B "C2'" 1 ATOM 314 C "C1'" . DC B 1 8 ? 37.078 24.190 -8.149 1.00 24.36 ? 8 DC B "C1'" 1 ATOM 315 N N1 . DC B 1 8 ? 35.907 24.475 -7.266 1.00 17.79 ? 8 DC B N1 1 ATOM 316 C C2 . DC B 1 8 ? 34.691 23.894 -7.634 1.00 18.01 ? 8 DC B C2 1 ATOM 317 O O2 . DC B 1 8 ? 34.653 23.179 -8.665 1.00 15.59 ? 8 DC B O2 1 ATOM 318 N N3 . DC B 1 8 ? 33.584 24.103 -6.885 1.00 17.14 ? 8 DC B N3 1 ATOM 319 C C4 . DC B 1 8 ? 33.711 24.883 -5.793 1.00 21.75 ? 8 DC B C4 1 ATOM 320 N N4 . DC B 1 8 ? 32.598 25.068 -5.080 1.00 17.33 ? 8 DC B N4 1 ATOM 321 C C5 . DC B 1 8 ? 34.949 25.479 -5.422 1.00 14.50 ? 8 DC B C5 1 ATOM 322 C C6 . DC B 1 8 ? 36.051 25.267 -6.166 1.00 19.19 ? 8 DC B C6 1 HETATM 323 O O . HOH C 2 . ? 39.392 18.393 1.895 1.00 22.96 ? 102 HOH A O 1 HETATM 324 O O . HOH C 2 . ? 33.500 6.575 6.566 1.00 17.06 ? 103 HOH A O 1 HETATM 325 O O . HOH C 2 . ? 32.489 14.533 -2.821 1.00 37.69 ? 104 HOH A O 1 HETATM 326 O O . HOH C 2 . ? 33.365 10.040 2.165 1.00 49.25 ? 107 HOH A O 1 HETATM 327 O O . HOH C 2 . ? 28.345 20.199 -4.693 1.00 41.72 ? 111 HOH A O 1 HETATM 328 O O . HOH C 2 . ? 29.652 5.854 15.919 1.00 29.41 ? 112 HOH A O 1 HETATM 329 O O . HOH C 2 . ? 35.386 10.799 3.135 1.00 21.97 ? 113 HOH A O 1 HETATM 330 O O . HOH C 2 . ? 25.930 18.165 -5.808 1.00 88.96 ? 114 HOH A O 1 HETATM 331 O O . HOH C 2 . ? 29.939 18.841 -2.774 1.00 34.93 ? 115 HOH A O 1 HETATM 332 O O . HOH C 2 . ? 27.098 12.791 -8.544 1.00 73.51 ? 117 HOH A O 1 HETATM 333 O O . HOH C 2 . ? 35.227 8.162 4.594 1.00 35.26 ? 118 HOH A O 1 HETATM 334 O O . HOH C 2 . ? 34.635 7.305 9.062 1.00 36.51 ? 122 HOH A O 1 HETATM 335 O O . HOH C 2 . ? 37.180 9.095 6.600 1.00 30.18 ? 123 HOH A O 1 HETATM 336 O O . HOH C 2 . ? 32.608 6.544 10.953 1.00 30.24 ? 124 HOH A O 1 HETATM 337 O O . HOH C 2 . ? 37.800 9.986 1.143 1.00 59.92 ? 125 HOH A O 1 HETATM 338 O O . HOH C 2 . ? 36.894 10.608 -2.436 1.00 39.86 ? 126 HOH A O 1 HETATM 339 O O . HOH C 2 . ? 29.511 23.335 -3.254 1.00 30.21 ? 129 HOH A O 1 HETATM 340 O O . HOH C 2 . ? 41.978 10.814 9.596 1.00 43.53 ? 136 HOH A O 1 HETATM 341 O O . HOH C 2 . ? 30.784 15.371 -1.527 1.00 41.14 ? 139 HOH A O 1 HETATM 342 O O . HOH C 2 . ? 25.393 5.422 13.555 1.00 41.89 ? 140 HOH A O 1 HETATM 343 O O . HOH C 2 . ? 33.320 13.387 -5.393 1.00 32.42 ? 143 HOH A O 1 HETATM 344 O O . HOH C 2 . ? 36.226 7.298 12.514 1.00 47.43 ? 144 HOH A O 1 HETATM 345 O O . HOH C 2 . ? 35.783 19.388 -9.327 1.00 26.80 ? 146 HOH A O 1 HETATM 346 O O . HOH C 2 . ? 35.428 9.689 15.630 1.00 42.90 ? 148 HOH A O 1 HETATM 347 O O . HOH C 2 . ? 29.750 14.075 -3.125 1.00 56.36 ? 150 HOH A O 1 HETATM 348 O O . HOH C 2 . ? 29.490 14.370 -6.608 1.00 41.95 ? 152 HOH A O 1 HETATM 349 O O . HOH C 2 . ? 25.102 15.299 -10.999 1.00 50.40 ? 156 HOH A O 1 HETATM 350 O O . HOH C 2 . ? 24.030 15.140 -8.983 1.00 61.61 ? 157 HOH A O 1 HETATM 351 O O . HOH C 2 . ? 40.803 8.888 7.776 1.00 49.10 ? 159 HOH A O 1 HETATM 352 O O . HOH C 2 . ? 41.143 10.280 -3.726 1.00 58.12 ? 160 HOH A O 1 HETATM 353 O O . HOH C 2 . ? 29.280 12.605 -10.181 1.00 55.89 ? 162 HOH A O 1 HETATM 354 O O . HOH C 2 . ? 41.747 8.912 1.311 1.00 68.59 ? 163 HOH A O 1 HETATM 355 O O . HOH C 2 . ? 32.313 12.567 -0.497 1.00 89.89 ? 165 HOH A O 1 HETATM 356 O O . HOH C 2 . ? 28.407 13.065 -12.519 1.00 55.20 ? 166 HOH A O 1 HETATM 357 O O . HOH C 2 . ? 34.561 11.342 -2.903 1.00 63.82 ? 167 HOH A O 1 HETATM 358 O O . HOH C 2 . ? 26.192 13.279 -10.972 1.00 51.07 ? 169 HOH A O 1 HETATM 359 O O . HOH C 2 . ? 39.469 8.760 -5.627 1.00 58.18 ? 170 HOH A O 1 HETATM 360 O O . HOH C 2 . ? 22.242 22.347 -7.749 1.00 69.34 ? 171 HOH A O 1 HETATM 361 O O . HOH C 2 . ? 34.237 9.279 -1.532 1.00 57.12 ? 173 HOH A O 1 HETATM 362 O O . HOH C 2 . ? 27.403 17.282 -2.094 1.00 50.75 ? 175 HOH A O 1 HETATM 363 O O . HOH D 2 . ? 27.640 17.221 1.854 1.00 26.40 ? 101 HOH B O 1 HETATM 364 O O . HOH D 2 . ? 22.609 7.831 6.800 1.00 36.23 ? 105 HOH B O 1 HETATM 365 O O . HOH D 2 . ? 29.410 12.737 0.956 1.00 28.29 ? 106 HOH B O 1 HETATM 366 O O . HOH D 2 . ? 29.301 18.741 0.048 1.00 29.26 ? 108 HOH B O 1 HETATM 367 O O . HOH D 2 . ? 33.023 18.225 8.446 1.00 40.28 ? 109 HOH B O 1 HETATM 368 O O . HOH D 2 . ? 35.891 21.689 -10.543 1.00 20.60 ? 110 HOH B O 1 HETATM 369 O O . HOH D 2 . ? 35.707 18.442 7.014 1.00 49.85 ? 116 HOH B O 1 HETATM 370 O O . HOH D 2 . ? 29.657 25.738 9.379 1.00 54.93 ? 119 HOH B O 1 HETATM 371 O O . HOH D 2 . ? 26.564 12.540 -0.358 1.00 51.61 ? 120 HOH B O 1 HETATM 372 O O . HOH D 2 . ? 28.817 15.024 -0.059 1.00 47.64 ? 121 HOH B O 1 HETATM 373 O O . HOH D 2 . ? 27.806 7.729 -2.671 1.00 54.89 ? 127 HOH B O 1 HETATM 374 O O . HOH D 2 . ? 28.598 9.737 0.276 1.00 50.58 ? 128 HOH B O 1 HETATM 375 O O . HOH D 2 . ? 32.903 27.290 -3.160 1.00 33.76 ? 130 HOH B O 1 HETATM 376 O O . HOH D 2 . ? 36.003 27.792 -3.338 1.00 38.04 ? 131 HOH B O 1 HETATM 377 O O . HOH D 2 . ? 34.077 26.420 1.277 1.00 41.02 ? 132 HOH B O 1 HETATM 378 O O . HOH D 2 . ? 31.955 25.627 -0.518 1.00 59.68 ? 133 HOH B O 1 HETATM 379 O O . HOH D 2 . ? 27.919 4.704 -2.902 1.00 32.33 ? 134 HOH B O 1 HETATM 380 O O . HOH D 2 . ? 24.425 22.826 7.371 1.00 73.87 ? 135 HOH B O 1 HETATM 381 O O . HOH D 2 . ? 38.384 19.954 4.127 1.00 43.13 ? 137 HOH B O 1 HETATM 382 O O . HOH D 2 . ? 26.528 19.357 2.716 1.00 41.67 ? 138 HOH B O 1 HETATM 383 O O . HOH D 2 . ? 21.791 10.338 7.288 1.00 41.01 ? 141 HOH B O 1 HETATM 384 O O . HOH D 2 . ? 24.500 10.631 7.816 1.00 23.71 ? 142 HOH B O 1 HETATM 385 O O . HOH D 2 . ? 41.831 29.839 -8.092 1.00 61.98 ? 145 HOH B O 1 HETATM 386 O O . HOH D 2 . ? 30.149 24.147 3.340 1.00 35.64 ? 147 HOH B O 1 HETATM 387 O O . HOH D 2 . ? 29.808 6.450 0.165 1.00 45.62 ? 149 HOH B O 1 HETATM 388 O O . HOH D 2 . ? 41.779 23.862 -10.411 1.00 41.72 ? 151 HOH B O 1 HETATM 389 O O . HOH D 2 . ? 39.530 23.120 4.154 1.00 65.80 ? 153 HOH B O 1 HETATM 390 O O . HOH D 2 . ? 30.124 21.614 -0.952 1.00 41.07 ? 154 HOH B O 1 HETATM 391 O O . HOH D 2 . ? 37.582 20.952 6.349 1.00 54.48 ? 155 HOH B O 1 HETATM 392 O O . HOH D 2 . ? 25.500 17.091 3.242 1.00 44.83 ? 158 HOH B O 1 HETATM 393 O O . HOH D 2 . ? 31.333 23.218 0.991 1.00 45.78 ? 161 HOH B O 1 HETATM 394 O O . HOH D 2 . ? 21.303 18.242 5.152 1.00 51.60 ? 164 HOH B O 1 HETATM 395 O O . HOH D 2 . ? 31.435 7.596 2.538 1.00 63.46 ? 168 HOH B O 1 HETATM 396 O O . HOH D 2 . ? 20.590 18.720 7.845 1.00 47.17 ? 172 HOH B O 1 HETATM 397 O O . HOH D 2 . ? 25.511 4.400 -2.393 1.00 38.60 ? 174 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DC 8 8 8 DC C A . n B 1 1 DG 1 1 1 DG G B . n B 1 2 DG 2 2 2 DG G B . n B 1 3 DT 3 3 3 DT T B . n B 1 4 DA 4 4 4 DA A B . n B 1 5 DT 5 5 5 DT T B . n B 1 6 DA 6 6 6 DA A B . n B 1 7 DC 7 7 7 DC C B . n B 1 8 DC 8 8 8 DC C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 102 102 HOH HOH A . C 2 HOH 2 103 103 HOH HOH A . C 2 HOH 3 104 104 HOH HOH A . C 2 HOH 4 107 107 HOH HOH A . C 2 HOH 5 111 111 HOH HOH A . C 2 HOH 6 112 112 HOH HOH A . C 2 HOH 7 113 113 HOH HOH A . C 2 HOH 8 114 114 HOH HOH A . C 2 HOH 9 115 115 HOH HOH A . C 2 HOH 10 117 117 HOH HOH A . C 2 HOH 11 118 118 HOH HOH A . C 2 HOH 12 122 122 HOH HOH A . C 2 HOH 13 123 123 HOH HOH A . C 2 HOH 14 124 124 HOH HOH A . C 2 HOH 15 125 125 HOH HOH A . C 2 HOH 16 126 126 HOH HOH A . C 2 HOH 17 129 129 HOH HOH A . C 2 HOH 18 136 136 HOH HOH A . C 2 HOH 19 139 139 HOH HOH A . C 2 HOH 20 140 140 HOH HOH A . C 2 HOH 21 143 143 HOH HOH A . C 2 HOH 22 144 144 HOH HOH A . C 2 HOH 23 146 146 HOH HOH A . C 2 HOH 24 148 148 HOH HOH A . C 2 HOH 25 150 150 HOH HOH A . C 2 HOH 26 152 152 HOH HOH A . C 2 HOH 27 156 156 HOH HOH A . C 2 HOH 28 157 157 HOH HOH A . C 2 HOH 29 159 159 HOH HOH A . C 2 HOH 30 160 160 HOH HOH A . C 2 HOH 31 162 162 HOH HOH A . C 2 HOH 32 163 163 HOH HOH A . C 2 HOH 33 165 165 HOH HOH A . C 2 HOH 34 166 166 HOH HOH A . C 2 HOH 35 167 167 HOH HOH A . C 2 HOH 36 169 169 HOH HOH A . C 2 HOH 37 170 170 HOH HOH A . C 2 HOH 38 171 171 HOH HOH A . C 2 HOH 39 173 173 HOH HOH A . C 2 HOH 40 175 175 HOH HOH A . D 2 HOH 1 101 101 HOH HOH B . D 2 HOH 2 105 105 HOH HOH B . D 2 HOH 3 106 106 HOH HOH B . D 2 HOH 4 108 108 HOH HOH B . D 2 HOH 5 109 109 HOH HOH B . D 2 HOH 6 110 110 HOH HOH B . D 2 HOH 7 116 116 HOH HOH B . D 2 HOH 8 119 119 HOH HOH B . D 2 HOH 9 120 120 HOH HOH B . D 2 HOH 10 121 121 HOH HOH B . D 2 HOH 11 127 127 HOH HOH B . D 2 HOH 12 128 128 HOH HOH B . D 2 HOH 13 130 130 HOH HOH B . D 2 HOH 14 131 131 HOH HOH B . D 2 HOH 15 132 132 HOH HOH B . D 2 HOH 16 133 133 HOH HOH B . D 2 HOH 17 134 134 HOH HOH B . D 2 HOH 18 135 135 HOH HOH B . D 2 HOH 19 137 137 HOH HOH B . D 2 HOH 20 138 138 HOH HOH B . D 2 HOH 21 141 141 HOH HOH B . D 2 HOH 22 142 142 HOH HOH B . D 2 HOH 23 145 145 HOH HOH B . D 2 HOH 24 147 147 HOH HOH B . D 2 HOH 25 149 149 HOH HOH B . D 2 HOH 26 151 151 HOH HOH B . D 2 HOH 27 153 153 HOH HOH B . D 2 HOH 28 154 154 HOH HOH B . D 2 HOH 29 155 155 HOH HOH B . D 2 HOH 30 158 158 HOH HOH B . D 2 HOH 31 161 161 HOH HOH B . D 2 HOH 32 164 164 HOH HOH B . D 2 HOH 33 168 168 HOH HOH B . D 2 HOH 34 172 172 HOH HOH B . D 2 HOH 35 174 174 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-24 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 AUTOMAR 'data collection' . ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.53 108.30 2.23 0.30 N 2 1 "O4'" B DG 1 ? ? "C1'" B DG 1 ? ? N9 B DG 1 ? ? 110.11 108.30 1.81 0.30 N 3 1 N1 B DA 6 ? ? C6 B DA 6 ? ? N6 B DA 6 ? ? 125.60 118.60 7.00 0.60 N 4 1 C5 B DA 6 ? ? C6 B DA 6 ? ? N6 B DA 6 ? ? 116.95 123.70 -6.75 0.80 N 5 1 "O4'" B DC 8 ? ? "C1'" B DC 8 ? ? "C2'" B DC 8 ? ? 110.10 106.80 3.30 0.50 N 6 1 C6 B DC 8 ? ? N1 B DC 8 ? ? C2 B DC 8 ? ? 123.11 120.30 2.81 0.40 N 7 1 C5 B DC 8 ? ? C6 B DC 8 ? ? N1 B DC 8 ? ? 116.80 121.00 -4.20 0.50 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 2PL4 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.318 -0.143 -0.114 -2.887 -6.737 -0.145 1 A_DG1:DC8_B A 1 ? B 8 ? 19 1 1 A DG 2 1_555 B DC 7 1_555 -0.424 -0.175 -0.080 -10.378 -15.292 2.626 2 A_DG2:DC7_B A 2 ? B 7 ? 19 1 1 A DT 3 1_555 B DA 6 1_555 0.005 -0.197 0.105 -3.989 -12.292 -8.101 3 A_DT3:DA6_B A 3 ? B 6 ? 20 1 1 A DA 4 1_555 B DT 5 1_555 -0.023 -0.159 0.166 -4.296 -11.997 2.067 4 A_DA4:DT5_B A 4 ? B 5 ? 20 1 1 A DT 5 1_555 B DA 4 1_555 0.018 -0.123 0.082 8.460 -14.910 3.403 5 A_DT5:DA4_B A 5 ? B 4 ? 20 1 1 A DA 6 1_555 B DT 3 1_555 -0.081 -0.235 -0.119 7.378 -17.271 0.203 6 A_DA6:DT3_B A 6 ? B 3 ? 20 1 1 A DC 7 1_555 B DG 2 1_555 0.375 -0.147 -0.039 10.108 -17.626 3.182 7 A_DC7:DG2_B A 7 ? B 2 ? 19 1 1 A DC 8 1_555 B DG 1 1_555 0.252 -0.173 -0.099 9.973 -2.202 -2.185 8 A_DC8:DG1_B A 8 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A DG 2 1_555 B DC 7 1_555 0.295 -1.844 3.380 -0.791 8.674 30.421 -4.921 -0.681 2.754 16.119 1.470 31.615 1 AA_DG1DG2:DC7DC8_BB A 1 ? B 8 ? A 2 ? B 7 ? 1 A DG 2 1_555 B DC 7 1_555 A DT 3 1_555 B DA 6 1_555 -0.861 -1.269 3.068 -0.773 1.565 39.029 -2.074 1.200 3.032 2.341 1.156 39.066 2 AA_DG2DT3:DA6DC7_BB A 2 ? B 7 ? A 3 ? B 6 ? 1 A DT 3 1_555 B DA 6 1_555 A DA 4 1_555 B DT 5 1_555 0.628 -1.295 3.126 0.486 9.080 28.873 -4.136 -1.114 2.617 17.664 -0.946 30.242 3 AA_DT3DA4:DT5DA6_BB A 3 ? B 6 ? A 4 ? B 5 ? 1 A DA 4 1_555 B DT 5 1_555 A DT 5 1_555 B DA 4 1_555 0.296 -1.119 2.944 0.351 3.100 33.039 -2.419 -0.467 2.833 5.435 -0.615 33.181 4 AA_DA4DT5:DA4DT5_BB A 4 ? B 5 ? A 5 ? B 4 ? 1 A DT 5 1_555 B DA 4 1_555 A DA 6 1_555 B DT 3 1_555 -0.822 -1.241 3.137 0.614 15.307 28.151 -4.653 1.589 2.172 28.920 -1.160 31.975 5 AA_DT5DA6:DT3DA4_BB A 5 ? B 4 ? A 6 ? B 3 ? 1 A DA 6 1_555 B DT 3 1_555 A DC 7 1_555 B DG 2 1_555 0.728 -1.245 3.150 -0.328 2.844 37.282 -2.298 -1.176 3.044 4.441 0.512 37.388 6 AA_DA6DC7:DG2DT3_BB A 6 ? B 3 ? A 7 ? B 2 ? 1 A DC 7 1_555 B DG 2 1_555 A DC 8 1_555 B DG 1 1_555 -0.607 -1.707 3.184 -1.789 10.922 29.791 -4.909 0.818 2.453 20.380 3.337 31.737 7 AA_DC7DC8:DG1DG2_BB A 7 ? B 2 ? A 8 ? B 1 ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2PKV _pdbx_initial_refinement_model.details ? #