0.024668
0.000000
0.000000
0.000000
0.013463
0.000000
0.000000
0.000000
0.006922
0.000000
0.000000
0.000000
Sawaya, M.R.
Pashkov, I.
Kudryashov, D.S.
Reisler, E.
Yeates, T.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
40.539
74.276
144.474
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H16 N5 O13 P3
507.181
ADENOSINE-5'-TRIPHOSPHATE
non-polymer
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C48 H75 N5 O14
946.134
KABIRAMIDE C
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
R
P
N
79
N
O
N
80
N
O
N
81
N
O
N
82
R
P
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
O
N
87
N
C
N
88
R
C
N
89
N
O
N
90
S
C
N
91
N
O
N
92
R
C
N
93
N
O
N
94
R
C
Y
95
N
N
Y
96
N
C
Y
97
N
N
Y
98
N
C
Y
99
N
C
N
100
N
N
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
CA
N
122
N
N
N
123
R
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
S
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
N
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
Y
190
N
C
Y
191
N
N
Y
192
N
C
Y
193
N
C
Y
194
N
N
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
S
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
O
N
232
S
C
N
233
N
C
N
234
R
C
N
235
N
C
N
236
N
C
N
237
S
C
N
238
N
O
N
239
R
C
N
240
N
N
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
S
C
N
247
N
C
N
248
R
C
N
249
N
O
N
250
N
C
Y
251
N
C
Y
252
N
C
Y
253
N
O
Y
254
N
N
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
O
Y
259
N
N
Y
260
N
C
Y
261
N
C
Y
262
N
N
Y
263
N
C
Y
264
N
O
Y
265
N
C
N
266
N
C
N
267
N
C
N
268
N
C
N
269
S
C
N
270
N
O
N
271
N
C
N
272
R
C
N
273
N
C
N
274
S
C
N
275
N
C
N
276
S
C
N
277
N
O
N
278
N
C
N
279
S
C
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
O
N
285
R
C
N
286
N
C
N
287
R
C
N
288
N
O
N
289
N
C
N
290
R
C
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
N
N
295
N
C
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
N
400
N
C
N
401
N
C
N
402
N
C
N
403
N
N
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
N
N
421
S
C
N
422
N
C
N
423
N
O
N
424
N
C
N
425
N
C
N
426
N
S
N
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
N
N
441
S
C
N
442
N
C
N
443
N
O
N
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
N
N
481
S
C
N
482
N
C
N
483
N
O
N
484
N
C
N
485
N
O
N
486
N
O
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
S
N
495
N
O
N
496
N
O
N
497
N
O
N
498
N
O
N
499
N
N
N
500
S
C
N
501
N
C
N
502
N
O
N
503
R
C
N
504
N
O
N
505
N
C
N
506
N
O
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
N
N
517
S
C
N
518
N
C
N
519
N
O
N
520
N
C
Y
521
N
C
Y
522
N
C
Y
523
N
C
Y
524
N
N
Y
525
N
C
Y
526
N
C
Y
527
N
C
Y
528
N
C
Y
529
N
C
N
530
N
O
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
N
N
544
S
C
N
545
N
C
N
546
N
O
N
547
N
C
Y
548
N
C
Y
549
N
C
Y
550
N
C
Y
551
N
C
Y
552
N
C
Y
553
N
C
N
554
N
O
N
555
N
O
N
556
N
H
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
N
N
568
S
C
N
569
N
C
N
570
N
O
N
571
N
C
N
572
N
C
N
573
N
C
N
574
N
O
N
575
N
H
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
H
N
580
N
H
N
581
N
H
N
582
N
H
N
583
N
H
N
584
N
H
N
585
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
sing
Y
106
N
doub
N
107
N
sing
Y
108
N
sing
Y
109
N
sing
Y
110
N
doub
N
111
N
sing
Y
112
N
doub
N
113
N
sing
N
114
N
sing
Y
115
N
sing
Y
116
N
doub
N
117
N
sing
Y
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
Y
189
N
sing
Y
190
N
doub
Y
191
N
doub
N
192
N
sing
Y
193
N
sing
N
194
N
sing
Y
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
Y
266
N
doub
Y
267
N
sing
Y
268
N
sing
N
269
N
sing
Y
270
N
sing
Y
271
N
doub
Y
272
N
sing
Y
273
N
doub
Y
274
N
sing
Y
275
N
sing
N
276
N
sing
Y
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
Y
281
N
doub
Y
282
N
doub
Y
283
N
sing
N
284
N
sing
Y
285
N
sing
N
286
N
sing
N
287
E
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
E
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
doub
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
Y
442
N
doub
Y
443
N
sing
Y
444
N
sing
N
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
doub
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
doub
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
doub
N
485
N
doub
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
doub
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
doub
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
Y
515
N
doub
Y
516
N
sing
Y
517
N
sing
N
518
N
sing
Y
519
N
doub
Y
520
N
sing
Y
521
N
sing
N
522
N
sing
Y
523
N
sing
Y
524
N
doub
N
525
N
sing
Y
526
N
doub
N
527
N
sing
Y
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
doub
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
Y
543
N
doub
Y
544
N
sing
Y
545
N
sing
N
546
N
sing
Y
547
N
doub
N
548
N
sing
Y
549
N
doub
N
550
N
sing
Y
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
doub
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
64
454
465
10.1107/S0907444908003351
18391412
Multiple crystal structures of actin dimers and their implications for interactions in the actin filament.
2008
10.2210/pdb2q36/pdb
pdb_00002q36
100
1
CCD
2005-10-21
ADSC QUANTUM 315
double crystal, Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
8.2.2
ALS
1.00
SYNCHROTRON
ALS BEAMLINE 8.2.2
41862.613
Actin, alpha skeletal muscle
1
nat
polymer
40.078
CALCIUM ION
1
syn
non-polymer
96.063
SULFATE ION
2
syn
non-polymer
507.181
ADENOSINE-5'-TRIPHOSPHATE
1
syn
non-polymer
946.134
KABIRAMIDE C
1
syn
non-polymer
18.015
water
69
nat
water
Alpha-actin-1
no
no
DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD
DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT
HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL
APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD
DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT
HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL
APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
rabbit
Oryctolagus
sample
9986
Oryctolagus cuniculus
1
2.60
52.63
VAPOR DIFFUSION, HANGING DROP
8.5
30% PEG4000, 0.1 M Tris, 0.2 M lithium sulfate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Advisory
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2007-06-05
1
1
2008-05-01
1
2
2011-07-13
1
3
2017-10-18
1
4
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
same complex without the cross-link
RCSB
Y
RCSB
2007-05-29
REL
REL
CA
CALCIUM ION
SO4
SULFATE ION
ATP
ADENOSINE-5'-TRIPHOSPHATE
KAB
KABIRAMIDE C
HOH
water
2A5X
pdb entry 2A5X
PDB
experimental model
CA
401
2
CA
CA
401
A
SO4
403
3
SO4
SO4
403
A
SO4
404
3
SO4
SO4
404
A
ATP
400
4
ATP
ATP
400
A
KAB
402
5
KAB
KAB
402
A
HOH
405
6
HOH
HOH
405
A
HOH
406
6
HOH
HOH
406
A
HOH
407
6
HOH
HOH
407
A
HOH
408
6
HOH
HOH
408
A
HOH
409
6
HOH
HOH
409
A
HOH
410
6
HOH
HOH
410
A
HOH
411
6
HOH
HOH
411
A
HOH
412
6
HOH
HOH
412
A
HOH
413
6
HOH
HOH
413
A
HOH
414
6
HOH
HOH
414
A
HOH
415
6
HOH
HOH
415
A
HOH
416
6
HOH
HOH
416
A
HOH
417
6
HOH
HOH
417
A
HOH
418
6
HOH
HOH
418
A
HOH
419
6
HOH
HOH
419
A
HOH
420
6
HOH
HOH
420
A
HOH
421
6
HOH
HOH
421
A
HOH
422
6
HOH
HOH
422
A
HOH
423
6
HOH
HOH
423
A
HOH
424
6
HOH
HOH
424
A
HOH
425
6
HOH
HOH
425
A
HOH
426
6
HOH
HOH
426
A
HOH
427
6
HOH
HOH
427
A
HOH
428
6
HOH
HOH
428
A
HOH
429
6
HOH
HOH
429
A
HOH
430
6
HOH
HOH
430
A
HOH
431
6
HOH
HOH
431
A
HOH
432
6
HOH
HOH
432
A
HOH
433
6
HOH
HOH
433
A
HOH
434
6
HOH
HOH
434
A
HOH
435
6
HOH
HOH
435
A
HOH
436
6
HOH
HOH
436
A
HOH
437
6
HOH
HOH
437
A
HOH
438
6
HOH
HOH
438
A
HOH
439
6
HOH
HOH
439
A
HOH
440
6
HOH
HOH
440
A
HOH
441
6
HOH
HOH
441
A
HOH
442
6
HOH
HOH
442
A
HOH
443
6
HOH
HOH
443
A
HOH
444
6
HOH
HOH
444
A
HOH
445
6
HOH
HOH
445
A
HOH
446
6
HOH
HOH
446
A
HOH
447
6
HOH
HOH
447
A
HOH
448
6
HOH
HOH
448
A
HOH
449
6
HOH
HOH
449
A
HOH
450
6
HOH
HOH
450
A
HOH
451
6
HOH
HOH
451
A
HOH
452
6
HOH
HOH
452
A
HOH
453
6
HOH
HOH
453
A
HOH
454
6
HOH
HOH
454
A
HOH
455
6
HOH
HOH
455
A
HOH
456
6
HOH
HOH
456
A
HOH
457
6
HOH
HOH
457
A
HOH
458
6
HOH
HOH
458
A
HOH
459
6
HOH
HOH
459
A
HOH
460
6
HOH
HOH
460
A
HOH
461
6
HOH
HOH
461
A
HOH
462
6
HOH
HOH
462
A
HOH
463
6
HOH
HOH
463
A
HOH
464
6
HOH
HOH
464
A
HOH
465
6
HOH
HOH
465
A
HOH
466
6
HOH
HOH
466
A
HOH
467
6
HOH
HOH
467
A
HOH
468
6
HOH
HOH
468
A
HOH
469
6
HOH
HOH
469
A
HOH
470
6
HOH
HOH
470
A
HOH
471
6
HOH
HOH
471
A
HOH
472
6
HOH
HOH
472
A
HOH
473
6
HOH
HOH
473
A
n
1
1
A
n
2
2
A
n
3
3
A
GLU
4
n
4
GLU
4
A
THR
5
n
5
THR
5
A
THR
6
n
6
THR
6
A
ALA
7
n
7
ALA
7
A
LEU
8
n
8
LEU
8
A
VAL
9
n
9
VAL
9
A
CYS
10
n
10
CYS
10
A
ASP
11
n
11
ASP
11
A
ASN
12
n
12
ASN
12
A
GLY
13
n
13
GLY
13
A
SER
14
n
14
SER
14
A
GLY
15
n
15
GLY
15
A
LEU
16
n
16
LEU
16
A
VAL
17
n
17
VAL
17
A
LYS
18
n
18
LYS
18
A
ALA
19
n
19
ALA
19
A
GLY
20
n
20
GLY
20
A
PHE
21
n
21
PHE
21
A
ALA
22
n
22
ALA
22
A
GLY
23
n
23
GLY
23
A
ASP
24
n
24
ASP
24
A
ASP
25
n
25
ASP
25
A
ALA
26
n
26
ALA
26
A
PRO
27
n
27
PRO
27
A
ARG
28
n
28
ARG
28
A
ALA
29
n
29
ALA
29
A
VAL
30
n
30
VAL
30
A
PHE
31
n
31
PHE
31
A
PRO
32
n
32
PRO
32
A
SER
33
n
33
SER
33
A
ILE
34
n
34
ILE
34
A
VAL
35
n
35
VAL
35
A
GLY
36
n
36
GLY
36
A
ARG
37
n
37
ARG
37
A
PRO
38
n
38
PRO
38
A
ARG
39
n
39
ARG
39
A
HIS
40
n
40
HIS
40
A
n
41
41
A
n
42
42
A
n
43
43
A
n
44
44
A
n
45
45
A
n
46
46
A
n
47
47
A
n
48
48
A
n
49
49
A
LYS
50
n
50
LYS
50
A
ASP
51
n
51
ASP
51
A
SER
52
n
52
SER
52
A
TYR
53
n
53
TYR
53
A
VAL
54
n
54
VAL
54
A
GLY
55
n
55
GLY
55
A
ASP
56
n
56
ASP
56
A
GLU
57
n
57
GLU
57
A
ALA
58
n
58
ALA
58
A
GLN
59
n
59
GLN
59
A
SER
60
n
60
SER
60
A
LYS
61
n
61
LYS
61
A
ARG
62
n
62
ARG
62
A
GLY
63
n
63
GLY
63
A
ILE
64
n
64
ILE
64
A
LEU
65
n
65
LEU
65
A
THR
66
n
66
THR
66
A
LEU
67
n
67
LEU
67
A
LYS
68
n
68
LYS
68
A
TYR
69
n
69
TYR
69
A
PRO
70
n
70
PRO
70
A
ILE
71
n
71
ILE
71
A
GLU
72
n
72
GLU
72
A
HIS
73
n
73
HIS
73
A
GLY
74
n
74
GLY
74
A
ILE
75
n
75
ILE
75
A
ILE
76
n
76
ILE
76
A
THR
77
n
77
THR
77
A
ASN
78
n
78
ASN
78
A
TRP
79
n
79
TRP
79
A
ASP
80
n
80
ASP
80
A
ASP
81
n
81
ASP
81
A
MET
82
n
82
MET
82
A
GLU
83
n
83
GLU
83
A
LYS
84
n
84
LYS
84
A
ILE
85
n
85
ILE
85
A
TRP
86
n
86
TRP
86
A
HIS
87
n
87
HIS
87
A
HIS
88
n
88
HIS
88
A
THR
89
n
89
THR
89
A
PHE
90
n
90
PHE
90
A
TYR
91
n
91
TYR
91
A
ASN
92
n
92
ASN
92
A
GLU
93
n
93
GLU
93
A
LEU
94
n
94
LEU
94
A
ARG
95
n
95
ARG
95
A
VAL
96
n
96
VAL
96
A
ALA
97
n
97
ALA
97
A
PRO
98
n
98
PRO
98
A
GLU
99
n
99
GLU
99
A
GLU
100
n
100
GLU
100
A
HIS
101
n
101
HIS
101
A
PRO
102
n
102
PRO
102
A
THR
103
n
103
THR
103
A
LEU
104
n
104
LEU
104
A
LEU
105
n
105
LEU
105
A
THR
106
n
106
THR
106
A
GLU
107
n
107
GLU
107
A
ALA
108
n
108
ALA
108
A
PRO
109
n
109
PRO
109
A
LEU
110
n
110
LEU
110
A
ASN
111
n
111
ASN
111
A
PRO
112
n
112
PRO
112
A
LYS
113
n
113
LYS
113
A
ALA
114
n
114
ALA
114
A
ASN
115
n
115
ASN
115
A
ARG
116
n
116
ARG
116
A
GLU
117
n
117
GLU
117
A
LYS
118
n
118
LYS
118
A
MET
119
n
119
MET
119
A
THR
120
n
120
THR
120
A
GLN
121
n
121
GLN
121
A
ILE
122
n
122
ILE
122
A
MET
123
n
123
MET
123
A
PHE
124
n
124
PHE
124
A
GLU
125
n
125
GLU
125
A
THR
126
n
126
THR
126
A
PHE
127
n
127
PHE
127
A
ASN
128
n
128
ASN
128
A
VAL
129
n
129
VAL
129
A
PRO
130
n
130
PRO
130
A
ALA
131
n
131
ALA
131
A
MET
132
n
132
MET
132
A
TYR
133
n
133
TYR
133
A
VAL
134
n
134
VAL
134
A
ALA
135
n
135
ALA
135
A
ILE
136
n
136
ILE
136
A
GLN
137
n
137
GLN
137
A
ALA
138
n
138
ALA
138
A
VAL
139
n
139
VAL
139
A
LEU
140
n
140
LEU
140
A
SER
141
n
141
SER
141
A
LEU
142
n
142
LEU
142
A
TYR
143
n
143
TYR
143
A
ALA
144
n
144
ALA
144
A
SER
145
n
145
SER
145
A
GLY
146
n
146
GLY
146
A
ARG
147
n
147
ARG
147
A
THR
148
n
148
THR
148
A
THR
149
n
149
THR
149
A
GLY
150
n
150
GLY
150
A
ILE
151
n
151
ILE
151
A
VAL
152
n
152
VAL
152
A
LEU
153
n
153
LEU
153
A
ASP
154
n
154
ASP
154
A
SER
155
n
155
SER
155
A
GLY
156
n
156
GLY
156
A
ASP
157
n
157
ASP
157
A
GLY
158
n
158
GLY
158
A
VAL
159
n
159
VAL
159
A
THR
160
n
160
THR
160
A
HIS
161
n
161
HIS
161
A
ASN
162
n
162
ASN
162
A
VAL
163
n
163
VAL
163
A
PRO
164
n
164
PRO
164
A
ILE
165
n
165
ILE
165
A
TYR
166
n
166
TYR
166
A
GLU
167
n
167
GLU
167
A
GLY
168
n
168
GLY
168
A
TYR
169
n
169
TYR
169
A
ALA
170
n
170
ALA
170
A
LEU
171
n
171
LEU
171
A
PRO
172
n
172
PRO
172
A
HIS
173
n
173
HIS
173
A
ALA
174
n
174
ALA
174
A
ILE
175
n
175
ILE
175
A
MET
176
n
176
MET
176
A
ARG
177
n
177
ARG
177
A
LEU
178
n
178
LEU
178
A
ASP
179
n
179
ASP
179
A
LEU
180
n
180
LEU
180
A
ALA
181
n
181
ALA
181
A
GLY
182
n
182
GLY
182
A
ARG
183
n
183
ARG
183
A
ASP
184
n
184
ASP
184
A
LEU
185
n
185
LEU
185
A
THR
186
n
186
THR
186
A
ASP
187
n
187
ASP
187
A
TYR
188
n
188
TYR
188
A
LEU
189
n
189
LEU
189
A
MET
190
n
190
MET
190
A
LYS
191
n
191
LYS
191
A
ILE
192
n
192
ILE
192
A
LEU
193
n
193
LEU
193
A
THR
194
n
194
THR
194
A
GLU
195
n
195
GLU
195
A
ARG
196
n
196
ARG
196
A
GLY
197
n
197
GLY
197
A
TYR
198
n
198
TYR
198
A
SER
199
n
199
SER
199
A
PHE
200
n
200
PHE
200
A
VAL
201
n
201
VAL
201
A
THR
202
n
202
THR
202
A
THR
203
n
203
THR
203
A
ALA
204
n
204
ALA
204
A
GLU
205
n
205
GLU
205
A
ARG
206
n
206
ARG
206
A
GLU
207
n
207
GLU
207
A
ILE
208
n
208
ILE
208
A
VAL
209
n
209
VAL
209
A
ARG
210
n
210
ARG
210
A
ASP
211
n
211
ASP
211
A
ILE
212
n
212
ILE
212
A
LYS
213
n
213
LYS
213
A
GLU
214
n
214
GLU
214
A
LYS
215
n
215
LYS
215
A
LEU
216
n
216
LEU
216
A
CYS
217
n
217
CYS
217
A
TYR
218
n
218
TYR
218
A
VAL
219
n
219
VAL
219
A
ALA
220
n
220
ALA
220
A
LEU
221
n
221
LEU
221
A
ASP
222
n
222
ASP
222
A
PHE
223
n
223
PHE
223
A
GLU
224
n
224
GLU
224
A
ASN
225
n
225
ASN
225
A
GLU
226
n
226
GLU
226
A
MET
227
n
227
MET
227
A
ALA
228
n
228
ALA
228
A
THR
229
n
229
THR
229
A
ALA
230
n
230
ALA
230
A
ALA
231
n
231
ALA
231
A
SER
232
n
232
SER
232
A
SER
233
n
233
SER
233
A
SER
234
n
234
SER
234
A
SER
235
n
235
SER
235
A
LEU
236
n
236
LEU
236
A
GLU
237
n
237
GLU
237
A
LYS
238
n
238
LYS
238
A
SER
239
n
239
SER
239
A
TYR
240
n
240
TYR
240
A
GLU
241
n
241
GLU
241
A
LEU
242
n
242
LEU
242
A
PRO
243
n
243
PRO
243
A
ASP
244
n
244
ASP
244
A
GLY
245
n
245
GLY
245
A
GLN
246
n
246
GLN
246
A
VAL
247
n
247
VAL
247
A
ILE
248
n
248
ILE
248
A
THR
249
n
249
THR
249
A
ILE
250
n
250
ILE
250
A
GLY
251
n
251
GLY
251
A
ASN
252
n
252
ASN
252
A
GLU
253
n
253
GLU
253
A
ARG
254
n
254
ARG
254
A
PHE
255
n
255
PHE
255
A
ARG
256
n
256
ARG
256
A
CYS
257
n
257
CYS
257
A
PRO
258
n
258
PRO
258
A
GLU
259
n
259
GLU
259
A
THR
260
n
260
THR
260
A
LEU
261
n
261
LEU
261
A
PHE
262
n
262
PHE
262
A
GLN
263
n
263
GLN
263
A
PRO
264
n
264
PRO
264
A
SER
265
n
265
SER
265
A
PHE
266
n
266
PHE
266
A
ILE
267
n
267
ILE
267
A
GLY
268
n
268
GLY
268
A
MET
269
n
269
MET
269
A
GLU
270
n
270
GLU
270
A
SER
271
n
271
SER
271
A
ALA
272
n
272
ALA
272
A
GLY
273
n
273
GLY
273
A
ILE
274
n
274
ILE
274
A
HIS
275
n
275
HIS
275
A
GLU
276
n
276
GLU
276
A
THR
277
n
277
THR
277
A
THR
278
n
278
THR
278
A
TYR
279
n
279
TYR
279
A
ASN
280
n
280
ASN
280
A
SER
281
n
281
SER
281
A
ILE
282
n
282
ILE
282
A
MET
283
n
283
MET
283
A
LYS
284
n
284
LYS
284
A
CYS
285
n
285
CYS
285
A
ASP
286
n
286
ASP
286
A
ILE
287
n
287
ILE
287
A
ASP
288
n
288
ASP
288
A
ILE
289
n
289
ILE
289
A
ARG
290
n
290
ARG
290
A
LYS
291
n
291
LYS
291
A
ASP
292
n
292
ASP
292
A
LEU
293
n
293
LEU
293
A
TYR
294
n
294
TYR
294
A
ALA
295
n
295
ALA
295
A
ASN
296
n
296
ASN
296
A
ASN
297
n
297
ASN
297
A
VAL
298
n
298
VAL
298
A
MET
299
n
299
MET
299
A
SER
300
n
300
SER
300
A
GLY
301
n
301
GLY
301
A
GLY
302
n
302
GLY
302
A
THR
303
n
303
THR
303
A
THR
304
n
304
THR
304
A
MET
305
n
305
MET
305
A
TYR
306
n
306
TYR
306
A
PRO
307
n
307
PRO
307
A
GLY
308
n
308
GLY
308
A
ILE
309
n
309
ILE
309
A
ALA
310
n
310
ALA
310
A
ASP
311
n
311
ASP
311
A
ARG
312
n
312
ARG
312
A
MET
313
n
313
MET
313
A
GLN
314
n
314
GLN
314
A
LYS
315
n
315
LYS
315
A
GLU
316
n
316
GLU
316
A
ILE
317
n
317
ILE
317
A
THR
318
n
318
THR
318
A
ALA
319
n
319
ALA
319
A
LEU
320
n
320
LEU
320
A
ALA
321
n
321
ALA
321
A
PRO
322
n
322
PRO
322
A
SER
323
n
323
SER
323
A
THR
324
n
324
THR
324
A
MET
325
n
325
MET
325
A
LYS
326
n
326
LYS
326
A
ILE
327
n
327
ILE
327
A
LYS
328
n
328
LYS
328
A
ILE
329
n
329
ILE
329
A
ILE
330
n
330
ILE
330
A
ALA
331
n
331
ALA
331
A
PRO
332
n
332
PRO
332
A
PRO
333
n
333
PRO
333
A
GLU
334
n
334
GLU
334
A
ARG
335
n
335
ARG
335
A
LYS
336
n
336
LYS
336
A
TYR
337
n
337
TYR
337
A
SER
338
n
338
SER
338
A
VAL
339
n
339
VAL
339
A
TRP
340
n
340
TRP
340
A
ILE
341
n
341
ILE
341
A
GLY
342
n
342
GLY
342
A
GLY
343
n
343
GLY
343
A
SER
344
n
344
SER
344
A
ILE
345
n
345
ILE
345
A
LEU
346
n
346
LEU
346
A
ALA
347
n
347
ALA
347
A
SER
348
n
348
SER
348
A
LEU
349
n
349
LEU
349
A
SER
350
n
350
SER
350
A
THR
351
n
351
THR
351
A
PHE
352
n
352
PHE
352
A
GLN
353
n
353
GLN
353
A
GLN
354
n
354
GLN
354
A
MET
355
n
355
MET
355
A
TRP
356
n
356
TRP
356
A
ILE
357
n
357
ILE
357
A
THR
358
n
358
THR
358
A
LYS
359
n
359
LYS
359
A
GLN
360
n
360
GLN
360
A
GLU
361
n
361
GLU
361
A
TYR
362
n
362
TYR
362
A
ASP
363
n
363
ASP
363
A
GLU
364
n
364
GLU
364
A
ALA
365
n
365
ALA
365
A
GLY
366
n
366
GLY
366
A
PRO
367
n
367
PRO
367
A
SER
368
n
368
SER
368
A
ILE
369
n
369
ILE
369
A
VAL
370
n
370
VAL
370
A
HIS
371
n
371
HIS
371
A
ARG
372
n
372
ARG
372
A
n
373
373
A
n
374
374
A
n
375
375
A
1.2427
0.2103
-0.4615
1.1929
0.0173
2.1092
0.0159
-0.1520
0.1625
0.0647
0.0386
-0.0471
-0.2540
0.0308
-0.0546
-0.0513
-0.0082
-0.0384
-0.0697
-0.0450
-0.0542
refined
3.3882
-4.7701
-11.0904
X-RAY DIFFRACTION
1.3613
0.4405
-0.0215
1.8846
0.0164
1.2910
-0.0131
0.0895
0.0317
-0.1890
-0.0004
-0.0978
0.0486
0.1129
0.0136
-0.0791
0.0203
-0.0026
-0.0204
0.0192
-0.0629
refined
10.7206
-15.6152
-33.3337
X-RAY DIFFRACTION
2.5914
0.0604
-0.0269
2.1480
1.6377
2.5277
0.0000
-0.1785
-0.1106
0.2521
-0.0415
-0.0198
0.2135
-0.1021
0.0414
-0.0123
-0.0140
-0.0026
-0.0629
0.0035
-0.0950
refined
-1.3126
-35.0932
-24.1077
X-RAY DIFFRACTION
A
5
A
5
A
36
A
36
X-RAY DIFFRACTION
1
A
51
A
51
A
137
A
137
X-RAY DIFFRACTION
1
A
337
A
337
A
371
A
371
X-RAY DIFFRACTION
1
A
138
A
138
A
181
A
181
X-RAY DIFFRACTION
2
A
263
A
263
A
336
A
336
X-RAY DIFFRACTION
2
A
182
A
182
A
262
A
262
X-RAY DIFFRACTION
3
author_defined_assembly
2
dimeric
A
ATP
400
E
O2G
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
ATP
400
E
O1B
ATP
1_555
77.0
A
ATP
400
E
O2G
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
410
G
O
HOH
1_555
152.4
A
ATP
400
E
O1B
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
410
G
O
HOH
1_555
86.6
A
ATP
400
E
O2G
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
413
G
O
HOH
1_555
128.1
A
ATP
400
E
O1B
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
413
G
O
HOH
1_555
96.8
A
HOH
410
G
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
413
G
O
HOH
1_555
75.3
A
ATP
400
E
O2G
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
430
G
O
HOH
1_555
100.5
A
ATP
400
E
O1B
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
430
G
O
HOH
1_555
176.7
A
HOH
410
G
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
430
G
O
HOH
1_555
94.8
A
HOH
413
G
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
430
G
O
HOH
1_555
86.4
A
ATP
400
E
O2G
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
455
G
O
HOH
1_555
81.0
A
ATP
400
E
O1B
ATP
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
455
G
O
HOH
1_555
89.9
A
HOH
410
G
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
455
G
O
HOH
1_555
76.9
A
HOH
413
G
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
455
G
O
HOH
1_555
150.9
A
HOH
430
G
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
455
G
O
HOH
1_555
87.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_554
-x,y+1/2,-z-1/2
crystal symmetry operation
0.0000000000
37.1380000000
-72.2370000000
A
O
PHE
31
A
O
PHE
31
A
N
VAL
17
A
N
VAL
17
A
O
LYS
18
A
O
LYS
18
A
N
ASP
11
A
N
ASP
11
A
N
LEU
8
A
N
LEU
8
A
O
LEU
104
A
O
LEU
104
A
N
LEU
105
A
N
LEU
105
A
O
TYR
133
A
O
TYR
133
A
N
MET
132
A
N
MET
132
A
O
ILE
357
A
O
ILE
357
A
O
TYR
53
A
O
TYR
53
A
N
GLY
36
A
N
GLY
36
A
N
ARG
37
A
N
ARG
37
A
O
THR
66
A
O
THR
66
A
N
GLU
72
A
N
GLU
72
A
O
ILE
75
A
O
ILE
75
A
O
TYR
169
A
O
TYR
169
A
N
TYR
166
A
N
TYR
166
A
N
THR
160
A
N
THR
160
A
O
LEU
178
A
O
LEU
178
A
O
TYR
169
A
O
TYR
169
A
N
TYR
166
A
N
TYR
166
A
O
ILE
165
A
O
ILE
165
A
N
GLY
150
A
N
GLY
150
A
N
LEU
153
A
N
LEU
153
A
O
VAL
298
A
O
VAL
298
A
N
ASN
297
A
N
ASN
297
A
O
ILE
330
A
O
ILE
330
A
N
TYR
240
A
N
TYR
240
A
O
ILE
248
A
O
ILE
248
1
A
CG
GLU
4
A
CG
GLU
4
1
Y
1
A
CD
GLU
4
A
CD
GLU
4
1
Y
1
A
OE1
GLU
4
A
OE1
GLU
4
1
Y
1
A
OE2
GLU
4
A
OE2
GLU
4
1
Y
1
A
ASP
1
A
ASP
1
1
Y
1
A
GLU
2
A
GLU
2
1
Y
1
A
ASP
3
A
ASP
3
1
Y
1
A
GLN
41
A
GLN
41
1
Y
1
A
GLY
42
A
GLY
42
1
Y
1
A
VAL
43
A
VAL
43
1
Y
1
A
MET
44
A
MET
44
1
Y
1
A
VAL
45
A
VAL
45
1
Y
1
A
GLY
46
A
GLY
46
1
Y
1
A
MET
47
A
MET
47
1
Y
1
A
GLY
48
A
GLY
48
1
Y
1
A
GLN
49
A
GLN
49
1
Y
1
A
LYS
373
A
LYS
373
1
Y
1
A
CYS
374
A
CYS
374
1
Y
1
A
PHE
375
A
PHE
375
1
Y
1
A
C48
KAB
402
PLANAR
1
A
ALA
181
-151.91
-149.70
1
A
VAL
201
-133.85
-50.17
1
A
ASN
296
-140.79
56.36
1
A
HIS
371
-73.30
37.39
21.725
-0.200
0.000
0.000
0.530
0.000
-0.330
0.945
0.922
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.223
0.175
0.177
0.177
2.500
72.170
800
15767
15767
5.100
99.980
13.315
0.160
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.00
MOLECULAR REPLACEMENT
0.446
0.254
0.800
0.800
1.400
pdb entry 2A5X
MAXIMUM LIKELIHOOD
MASK
2.500
72.170
69
2995
109
0
2817
0.008
0.022
2989
0.001
0.020
1994
1.533
2.004
4062
0.885
3.000
4872
3.797
5.000
358
30.193
23.920
125
13.227
15.000
495
16.680
15.000
18
0.074
0.200
454
0.003
0.020
3235
0.001
0.020
582
0.200
0.200
561
0.190
0.200
2059
0.175
0.200
1441
0.085
0.200
1437
0.143
0.200
92
0.173
0.200
5
0.157
0.200
9
0.280
0.200
33
0.124
0.200
4
1.681
2.000
1865
0.331
2.000
725
2.504
3.000
2902
1.616
2.000
1377
2.432
3.000
1160
0.314
0.198
2.565
64
1065
1129
20
99.820
41.7
2.490
90.000
2Q36
15987
15987
-3.0
0.112
1.065
1
8.800
7.900
100.000
0.419
2.49
2.59
1727
1.089
1
7.60
99.90
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
phasing
R. J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
other
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
data collection
BOS
Actin Dimer Cross-linked between Residues 191 and 374 and complexed with Kabiramide C
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
the cross-linked dimer is generated by the following symmetry operator -X,1/2+Y,-1/2-Z
A
GLY
55
A
GLY
55
HELX_P
A
LYS
61
A
LYS
61
1
1
7
A
ASN
78
A
ASN
78
HELX_P
A
ASN
92
A
ASN
92
1
2
15
A
ALA
97
A
ALA
97
HELX_P
A
HIS
101
A
HIS
101
5
3
5
A
PRO
112
A
PRO
112
HELX_P
A
THR
126
A
THR
126
1
4
15
A
GLN
137
A
GLN
137
HELX_P
A
SER
145
A
SER
145
1
5
9
A
PRO
172
A
PRO
172
HELX_P
A
ILE
175
A
ILE
175
5
6
4
A
ALA
181
A
ALA
181
HELX_P
A
ARG
196
A
ARG
196
1
7
16
A
THR
202
A
THR
202
HELX_P
A
CYS
217
A
CYS
217
1
8
16
A
ASP
222
A
ASP
222
HELX_P
A
SER
233
A
SER
233
1
9
12
A
ASN
252
A
ASN
252
HELX_P
A
THR
260
A
THR
260
1
10
9
A
LEU
261
A
LEU
261
HELX_P
A
PHE
262
A
PHE
262
5
11
2
A
GLN
263
A
GLN
263
HELX_P
A
GLY
268
A
GLY
268
5
12
6
A
GLY
273
A
GLY
273
HELX_P
A
CYS
285
A
CYS
285
1
13
13
A
ASP
286
A
ASP
286
HELX_P
A
ASP
288
A
ASP
288
5
14
3
A
ILE
289
A
ILE
289
HELX_P
A
ALA
295
A
ALA
295
1
15
7
A
GLY
301
A
GLY
301
HELX_P
A
MET
305
A
MET
305
5
16
5
A
GLY
308
A
GLY
308
HELX_P
A
ALA
321
A
ALA
321
1
17
14
A
TYR
337
A
TYR
337
HELX_P
A
LEU
349
A
LEU
349
1
18
13
A
SER
350
A
SER
350
HELX_P
A
MET
355
A
MET
355
5
19
6
A
LYS
359
A
LYS
359
HELX_P
A
ALA
365
A
ALA
365
1
20
7
A
GLY
366
A
GLY
366
HELX_P
A
HIS
371
A
HIS
371
5
21
6
metalc
2.261
A
ATP
400
E
O2G
ATP
1_555
A
CA
401
B
CA
CA
1_555
metalc
2.158
A
ATP
400
E
O1B
ATP
1_555
A
CA
401
B
CA
CA
1_555
metalc
2.465
A
CA
401
B
CA
CA
1_555
A
HOH
410
G
O
HOH
1_555
metalc
2.371
A
CA
401
B
CA
CA
1_555
A
HOH
413
G
O
HOH
1_555
metalc
2.267
A
CA
401
B
CA
CA
1_555
A
HOH
430
G
O
HOH
1_555
metalc
2.246
A
CA
401
B
CA
CA
1_555
A
HOH
455
G
O
HOH
1_555
STRUCTURAL PROTEIN
cross-linked dimer, STRUCTURAL PROTEIN
ACTS_RABIT
UNP
1
3
P68135
DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD
DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT
HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL
APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
3
377
2Q36
1
375
P68135
A
1
1
375
6
3
2
3
5
2
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
A
ALA
29
A
ALA
29
A
PRO
32
A
PRO
32
A
LEU
16
A
LEU
16
A
PHE
21
A
PHE
21
A
LEU
8
A
LEU
8
A
ASN
12
A
ASN
12
A
THR
103
A
THR
103
A
GLU
107
A
GLU
107
A
ALA
131
A
ALA
131
A
ILE
136
A
ILE
136
A
ILE
357
A
ILE
357
A
THR
358
A
THR
358
A
TYR
53
A
TYR
53
A
VAL
54
A
VAL
54
A
VAL
35
A
VAL
35
A
PRO
38
A
PRO
38
A
LEU
65
A
LEU
65
A
LYS
68
A
LYS
68
A
ILE
71
A
ILE
71
A
GLU
72
A
GLU
72
A
ILE
75
A
ILE
75
A
ILE
76
A
ILE
76
A
TYR
169
A
TYR
169
A
ALA
170
A
ALA
170
A
THR
160
A
THR
160
A
TYR
166
A
TYR
166
A
MET
176
A
MET
176
A
LEU
178
A
LEU
178
A
TYR
169
A
TYR
169
A
ALA
170
A
ALA
170
A
THR
160
A
THR
160
A
TYR
166
A
TYR
166
A
GLY
150
A
GLY
150
A
SER
155
A
SER
155
A
ASN
297
A
ASN
297
A
SER
300
A
SER
300
A
ILE
329
A
ILE
329
A
ILE
330
A
ILE
330
A
LYS
238
A
LYS
238
A
GLU
241
A
GLU
241
A
VAL
247
A
VAL
247
A
ILE
250
A
ILE
250
BINDING SITE FOR RESIDUE CA A 401
A
CA
401
Software
5
BINDING SITE FOR RESIDUE SO4 A 403
A
SO4
403
Software
5
BINDING SITE FOR RESIDUE SO4 A 404
A
SO4
404
Software
5
BINDING SITE FOR RESIDUE ATP A 400
A
ATP
400
Software
24
BINDING SITE FOR RESIDUE KAB A 402
A
KAB
402
Software
19
A
ATP
400
E
ATP
5
1_555
A
HOH
410
G
HOH
5
1_555
A
HOH
413
G
HOH
5
1_555
A
HOH
430
G
HOH
5
1_555
A
HOH
455
G
HOH
5
1_555
A
ARG
62
A
ARG
62
5
1_555
A
ARG
95
A
ARG
95
5
4_445
A
THR
202
A
THR
202
5
1_555
A
THR
203
A
THR
203
5
1_555
A
HOH
421
G
HOH
5
1_555
A
GLY
308
A
GLY
308
5
1_555
A
ILE
309
A
ILE
309
5
1_555
A
ALA
310
A
ALA
310
5
1_555
A
ASP
311
A
ASP
311
5
1_555
A
HOH
426
G
HOH
5
1_555
A
GLY
13
A
GLY
13
24
1_555
A
SER
14
A
SER
14
24
1_555
A
GLY
15
A
GLY
15
24
1_555
A
LEU
16
A
LEU
16
24
1_555
A
LYS
18
A
LYS
18
24
1_555
A
GLY
156
A
GLY
156
24
1_555
A
ASP
157
A
ASP
157
24
1_555
A
GLY
158
A
GLY
158
24
1_555
A
VAL
159
A
VAL
159
24
1_555
A
GLY
182
A
GLY
182
24
1_555
A
ARG
210
A
ARG
210
24
1_555
A
LYS
213
A
LYS
213
24
1_555
A
GLU
214
A
GLU
214
24
1_555
A
GLY
301
A
GLY
301
24
1_555
A
GLY
302
A
GLY
302
24
1_555
A
THR
303
A
THR
303
24
1_555
A
MET
305
A
MET
305
24
1_555
A
TYR
306
A
TYR
306
24
1_555
A
CA
401
B
CA
24
1_555
A
HOH
406
G
HOH
24
1_555
A
HOH
411
G
HOH
24
1_555
A
HOH
455
G
HOH
24
1_555
A
HOH
456
G
HOH
24
1_555
A
HOH
458
G
HOH
24
1_555
A
GLY
23
A
GLY
23
19
1_555
A
ASP
24
A
ASP
24
19
1_555
A
ASP
25
A
ASP
25
19
1_555
A
LYS
68
A
LYS
68
19
1_655
A
GLU
72
A
GLU
72
19
1_655
A
THR
77
A
THR
77
19
1_655
A
TYR
133
A
TYR
133
19
1_555
A
TYR
143
A
TYR
143
19
1_555
A
ALA
144
A
ALA
144
19
1_555
A
GLY
146
A
GLY
146
19
1_555
A
ARG
147
A
ARG
147
19
1_555
A
GLY
168
A
GLY
168
19
1_555
A
TYR
169
A
TYR
169
19
1_555
A
GLU
334
A
GLU
334
19
1_555
A
ILE
345
A
ILE
345
19
1_555
A
LEU
346
A
LEU
346
19
1_555
A
SER
348
A
SER
348
19
1_555
A
HOH
417
G
HOH
19
1_555
A
HOH
434
G
HOH
19
1_555
19
P 21 21 21