0.009910 0.000000 0.000000 0.000000 0.008768 0.000000 0.000000 0.000000 0.014975 0.00000 0.00000 0.00000 Pillai, B. Cherney, M. Diaper, C.M. Sutherland, A. Blanchard, J.S. Vederas, J.C. James, M.N.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 100.910 114.047 66.777 C2 H4 O2 60.052 ACETIC ACID non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C4 H6 O6 150.087 L(+)-TARTARIC ACID non-polymer C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N O N 4 N C N 5 N H N 6 N H N 7 N H N 8 N H N 9 N N N 10 S C N 11 N C N 12 N O N 13 N C N 14 N O N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N N N 23 S C N 24 N C N 25 N O N 26 N C N 27 N C N 28 N C N 29 N N N 30 N C N 31 N N N 32 N N N 33 N O N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N N N 50 S C N 51 N C N 52 N O N 53 N C N 54 N C N 55 N O N 56 N N N 57 N O N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N N N 67 S C N 68 N C N 69 N O N 70 N C N 71 N C N 72 N O N 73 N O N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N N N 83 R C N 84 N C N 85 N O N 86 N C N 87 N S N 88 N O N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N N N 97 S C N 98 N C N 99 N O N 100 N C N 101 N C N 102 N C N 103 N O N 104 N N N 105 N O N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 S C N 118 N C N 119 N O N 120 N C N 121 N C N 122 N C N 123 N O N 124 N O N 125 N O N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N N N 136 N C N 137 N C N 138 N O N 139 N O N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C Y 150 N C Y 151 N N Y 152 N C Y 153 N C Y 154 N N N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N O N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 S C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N O N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C N 218 N C N 219 N C N 220 N C N 221 N N N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 N C N 243 N C N 244 N S N 245 N C N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C N 303 N O N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 R C N 317 N O N 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N O N 330 N O N 331 N C N 332 R C N 333 N O N 334 R C N 335 N O N 336 N C N 337 N O N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N N Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C N 383 N O N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N N N 397 S C N 398 N C N 399 N O N 400 N C N 401 N C N 402 N C N 403 N O N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N doub N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N doub N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N doub N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing Y 147 N sing Y 148 N doub Y 149 N doub N 150 N sing Y 151 N sing N 152 N sing Y 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing Y 255 N doub Y 256 N sing Y 257 N sing N 258 N sing Y 259 N doub N 260 N sing Y 261 N doub N 262 N sing Y 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing Y 339 N doub Y 340 N sing Y 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N sing Y 348 N doub N 349 N sing Y 350 N doub N 351 N sing Y 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing Y 367 N doub Y 368 N sing Y 369 N sing N 370 N sing Y 371 N doub N 372 N sing Y 373 N doub N 374 N sing Y 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing US Biochem.Biophys.Res.Commun. BBRCA9 0146 0006-291X 363 547 553 10.1016/j.bbrc.2007.09.012 17889830 Dynamics of catalysis revealed from the crystal structures of mutants of diaminopimelate epimerase. 2007 10.2210/pdb2q9h/pdb pdb_00002q9h 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 CCD 2005-07-21 ADSC QUANTUM 210 double crystal SINGLE WAVELENGTH M x-ray 1 1.115869 1.0 8.3.1 ALS 1.115869 SYNCHROTRON ALS BEAMLINE 8.3.1 30263.412 Diaminopimelate epimerase 5.1.1.7 C73S 1 man polymer 150.087 L(+)-TARTARIC ACID 1 syn non-polymer 60.052 ACETIC ACID 2 syn non-polymer 18.015 water 154 nat water DAP epimerase no no MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQSGNGARCF ARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHC VVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV DLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQSGNGARCF ARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHC VVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV DLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Haemophilus Escherichia sample dapF 727 Haemophilus influenzae 562 Escherichia coli 1 3.17 61.24 VAPOR DIFFUSION, HANGING DROP 7.5 0.8 M potassium sodium tartrate tetrahydrate, 0.2 M NaCl, 0.1M HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Structure summary Database references Derived calculations Data collection Refinement description 1 0 2007-10-23 1 1 2011-07-13 1 2 2012-02-22 1 3 2021-10-20 1 4 2023-08-30 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2007-06-12 REL REL TLA L(+)-TARTARIC ACID ACY ACETIC ACID HOH water 1GQZ PDB entry 1GQZ PDB experimental model TLA 454 2 TLA TLA 454 A ACY 455 3 ACY ACY 455 A ACY 456 3 ACY ACY 456 A HOH 300 4 HOH HOH 457 A HOH 301 4 HOH HOH 458 A HOH 302 4 HOH HOH 459 A HOH 303 4 HOH HOH 460 A HOH 304 4 HOH HOH 461 A HOH 305 4 HOH HOH 462 A HOH 306 4 HOH HOH 463 A HOH 307 4 HOH HOH 464 A HOH 308 4 HOH HOH 465 A HOH 309 4 HOH HOH 466 A HOH 310 4 HOH HOH 467 A HOH 311 4 HOH HOH 468 A HOH 312 4 HOH HOH 469 A HOH 313 4 HOH HOH 470 A HOH 314 4 HOH HOH 471 A HOH 315 4 HOH HOH 472 A HOH 316 4 HOH HOH 473 A HOH 317 4 HOH HOH 474 A HOH 318 4 HOH HOH 475 A HOH 319 4 HOH HOH 476 A HOH 320 4 HOH HOH 477 A HOH 321 4 HOH HOH 478 A HOH 322 4 HOH HOH 479 A HOH 323 4 HOH HOH 480 A HOH 324 4 HOH HOH 481 A HOH 325 4 HOH HOH 482 A HOH 326 4 HOH HOH 483 A HOH 327 4 HOH HOH 484 A HOH 328 4 HOH HOH 485 A HOH 329 4 HOH HOH 486 A HOH 330 4 HOH HOH 487 A HOH 331 4 HOH HOH 488 A HOH 332 4 HOH HOH 489 A HOH 333 4 HOH HOH 490 A HOH 334 4 HOH HOH 491 A HOH 335 4 HOH HOH 492 A HOH 336 4 HOH HOH 493 A HOH 337 4 HOH HOH 494 A HOH 338 4 HOH HOH 495 A HOH 339 4 HOH HOH 496 A HOH 340 4 HOH HOH 497 A HOH 341 4 HOH HOH 498 A HOH 342 4 HOH HOH 499 A HOH 343 4 HOH HOH 500 A HOH 344 4 HOH HOH 501 A HOH 345 4 HOH HOH 502 A HOH 346 4 HOH HOH 503 A HOH 347 4 HOH HOH 504 A HOH 348 4 HOH HOH 505 A HOH 349 4 HOH HOH 506 A HOH 350 4 HOH HOH 507 A HOH 351 4 HOH HOH 508 A HOH 352 4 HOH HOH 509 A HOH 353 4 HOH HOH 510 A HOH 354 4 HOH HOH 511 A HOH 355 4 HOH HOH 512 A HOH 356 4 HOH HOH 513 A HOH 357 4 HOH HOH 514 A HOH 358 4 HOH HOH 515 A HOH 359 4 HOH HOH 516 A HOH 360 4 HOH HOH 517 A HOH 361 4 HOH HOH 518 A HOH 362 4 HOH HOH 519 A HOH 363 4 HOH HOH 520 A HOH 364 4 HOH HOH 521 A HOH 365 4 HOH HOH 522 A HOH 366 4 HOH HOH 523 A HOH 367 4 HOH HOH 524 A HOH 368 4 HOH HOH 525 A HOH 369 4 HOH HOH 526 A HOH 370 4 HOH HOH 527 A HOH 371 4 HOH HOH 528 A HOH 372 4 HOH HOH 529 A HOH 373 4 HOH HOH 530 A HOH 374 4 HOH HOH 531 A HOH 375 4 HOH HOH 532 A HOH 376 4 HOH HOH 533 A HOH 377 4 HOH HOH 534 A HOH 378 4 HOH HOH 535 A HOH 379 4 HOH HOH 536 A HOH 380 4 HOH HOH 537 A HOH 381 4 HOH HOH 538 A HOH 382 4 HOH HOH 539 A HOH 383 4 HOH HOH 540 A HOH 384 4 HOH HOH 541 A HOH 385 4 HOH HOH 542 A HOH 386 4 HOH HOH 543 A HOH 387 4 HOH HOH 544 A HOH 388 4 HOH HOH 545 A HOH 389 4 HOH HOH 546 A HOH 390 4 HOH HOH 547 A HOH 391 4 HOH HOH 548 A HOH 392 4 HOH HOH 549 A HOH 393 4 HOH HOH 550 A HOH 394 4 HOH HOH 551 A HOH 395 4 HOH HOH 552 A HOH 396 4 HOH HOH 553 A HOH 397 4 HOH HOH 554 A HOH 398 4 HOH HOH 555 A HOH 399 4 HOH HOH 556 A HOH 400 4 HOH HOH 557 A HOH 401 4 HOH HOH 558 A HOH 402 4 HOH HOH 559 A HOH 403 4 HOH HOH 560 A HOH 404 4 HOH HOH 561 A HOH 405 4 HOH HOH 562 A HOH 406 4 HOH HOH 563 A HOH 407 4 HOH HOH 564 A HOH 408 4 HOH HOH 565 A HOH 409 4 HOH HOH 566 A HOH 410 4 HOH HOH 567 A HOH 411 4 HOH HOH 568 A HOH 412 4 HOH HOH 569 A HOH 413 4 HOH HOH 570 A HOH 414 4 HOH HOH 571 A HOH 415 4 HOH HOH 572 A HOH 416 4 HOH HOH 573 A HOH 417 4 HOH HOH 574 A HOH 418 4 HOH HOH 575 A HOH 419 4 HOH HOH 576 A HOH 420 4 HOH HOH 577 A HOH 421 4 HOH HOH 578 A HOH 422 4 HOH HOH 579 A HOH 423 4 HOH HOH 580 A HOH 424 4 HOH HOH 581 A HOH 425 4 HOH HOH 582 A HOH 426 4 HOH HOH 583 A HOH 427 4 HOH HOH 584 A HOH 428 4 HOH HOH 585 A HOH 429 4 HOH HOH 586 A HOH 430 4 HOH HOH 587 A HOH 431 4 HOH HOH 588 A HOH 432 4 HOH HOH 589 A HOH 433 4 HOH HOH 590 A HOH 434 4 HOH HOH 591 A HOH 435 4 HOH HOH 592 A HOH 436 4 HOH HOH 593 A HOH 437 4 HOH HOH 594 A HOH 438 4 HOH HOH 595 A HOH 439 4 HOH HOH 596 A HOH 440 4 HOH HOH 597 A HOH 441 4 HOH HOH 598 A HOH 442 4 HOH HOH 599 A HOH 443 4 HOH HOH 600 A HOH 444 4 HOH HOH 601 A HOH 445 4 HOH HOH 602 A HOH 446 4 HOH HOH 603 A HOH 447 4 HOH HOH 604 A HOH 448 4 HOH HOH 605 A HOH 449 4 HOH HOH 606 A HOH 450 4 HOH HOH 607 A HOH 451 4 HOH HOH 608 A HOH 452 4 HOH HOH 609 A HOH 453 4 HOH HOH 610 A MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A PHE 3 n 3 PHE 3 A SER 4 n 4 SER 4 A LYS 5 n 5 LYS 5 A MET 6 n 6 MET 6 A HIS 7 n 7 HIS 7 A GLY 8 n 8 GLY 8 A LEU 9 n 9 LEU 9 A GLY 10 n 10 GLY 10 A ASN 11 n 11 ASN 11 A ASP 12 n 12 ASP 12 A PHE 13 n 13 PHE 13 A VAL 14 n 14 VAL 14 A VAL 15 n 15 VAL 15 A VAL 16 n 16 VAL 16 A ASP 17 n 17 ASP 17 A GLY 18 n 18 GLY 18 A VAL 19 n 19 VAL 19 A THR 20 n 20 THR 20 A GLN 21 n 21 GLN 21 A ASN 22 n 22 ASN 22 A VAL 23 n 23 VAL 23 A PHE 24 n 24 PHE 24 A PHE 25 n 25 PHE 25 A THR 26 n 26 THR 26 A PRO 27 n 27 PRO 27 A GLU 28 n 28 GLU 28 A THR 29 n 29 THR 29 A ILE 30 n 30 ILE 30 A ARG 31 n 31 ARG 31 A ARG 32 n 32 ARG 32 A LEU 33 n 33 LEU 33 A ALA 34 n 34 ALA 34 A ASN 35 n 35 ASN 35 A ARG 36 n 36 ARG 36 A HIS 37 n 37 HIS 37 A CYS 38 n 38 CYS 38 A GLY 39 n 39 GLY 39 A ILE 40 n 40 ILE 40 A GLY 41 n 41 GLY 41 A PHE 42 n 42 PHE 42 A ASP 43 n 43 ASP 43 A GLN 44 n 44 GLN 44 A LEU 45 n 45 LEU 45 A LEU 46 n 46 LEU 46 A ILE 47 n 47 ILE 47 A VAL 48 n 48 VAL 48 A GLU 49 n 49 GLU 49 A ALA 50 n 50 ALA 50 A PRO 51 n 51 PRO 51 A TYR 52 n 52 TYR 52 A ASP 53 n 53 ASP 53 A PRO 54 n 54 PRO 54 A GLU 55 n 55 GLU 55 A LEU 56 n 56 LEU 56 A ASP 57 n 57 ASP 57 A PHE 58 n 58 PHE 58 A HIS 59 n 59 HIS 59 A TYR 60 n 60 TYR 60 A ARG 61 n 61 ARG 61 A ILE 62 n 62 ILE 62 A PHE 63 n 63 PHE 63 A ASN 64 n 64 ASN 64 A ALA 65 n 65 ALA 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A SER 68 n 68 SER 68 A GLU 69 n 69 GLU 69 A VAL 70 n 70 VAL 70 A SER 71 n 71 SER 71 A GLN 72 n 72 GLN 72 A SER 73 n 73 SER 73 A GLY 74 n 74 GLY 74 A ASN 75 n 75 ASN 75 A GLY 76 n 76 GLY 76 A ALA 77 n 77 ALA 77 A ARG 78 n 78 ARG 78 A CYS 79 n 79 CYS 79 A PHE 80 n 80 PHE 80 A ALA 81 n 81 ALA 81 A ARG 82 n 82 ARG 82 A PHE 83 n 83 PHE 83 A VAL 84 n 84 VAL 84 A THR 85 n 85 THR 85 A LEU 86 n 86 LEU 86 A LYS 87 n 87 LYS 87 A GLY 88 n 88 GLY 88 A LEU 89 n 89 LEU 89 A THR 90 n 90 THR 90 A ASN 91 n 91 ASN 91 A LYS 92 n 92 LYS 92 A LYS 93 n 93 LYS 93 A ASP 94 n 94 ASP 94 A ILE 95 n 95 ILE 95 A SER 96 n 96 SER 96 A VAL 97 n 97 VAL 97 A SER 98 n 98 SER 98 A THR 99 n 99 THR 99 A GLN 100 n 100 GLN 100 A LYS 101 n 101 LYS 101 A GLY 102 n 102 GLY 102 A ASN 103 n 103 ASN 103 A MET 104 n 104 MET 104 A VAL 105 n 105 VAL 105 A LEU 106 n 106 LEU 106 A THR 107 n 107 THR 107 A VAL 108 n 108 VAL 108 A LYS 109 n 109 LYS 109 A ASP 110 n 110 ASP 110 A ASP 111 n 111 ASP 111 A ASN 112 n 112 ASN 112 A GLN 113 n 113 GLN 113 A ILE 114 n 114 ILE 114 A ARG 115 n 115 ARG 115 A VAL 116 n 116 VAL 116 A ASN 117 n 117 ASN 117 A MET 118 n 118 MET 118 A GLY 119 n 119 GLY 119 A GLU 120 n 120 GLU 120 A PRO 121 n 121 PRO 121 A ILE 122 n 122 ILE 122 A TRP 123 n 123 TRP 123 A GLU 124 n 124 GLU 124 A PRO 125 n 125 PRO 125 A ALA 126 n 126 ALA 126 A LYS 127 n 127 LYS 127 A ILE 128 n 128 ILE 128 A PRO 129 n 129 PRO 129 A PHE 130 n 130 PHE 130 A THR 131 n 131 THR 131 A ALA 132 n 132 ALA 132 A ASN 133 n 133 ASN 133 A LYS 134 n 134 LYS 134 A PHE 135 n 135 PHE 135 A GLU 136 n 136 GLU 136 A LYS 137 n 137 LYS 137 A ASN 138 n 138 ASN 138 A TYR 139 n 139 TYR 139 A ILE 140 n 140 ILE 140 A LEU 141 n 141 LEU 141 A ARG 142 n 142 ARG 142 A THR 143 n 143 THR 143 A ASP 144 n 144 ASP 144 A ILE 145 n 145 ILE 145 A GLN 146 n 146 GLN 146 A THR 147 n 147 THR 147 A VAL 148 n 148 VAL 148 A LEU 149 n 149 LEU 149 A CYS 150 n 150 CYS 150 A GLY 151 n 151 GLY 151 A ALA 152 n 152 ALA 152 A VAL 153 n 153 VAL 153 A SER 154 n 154 SER 154 A MET 155 n 155 MET 155 A GLY 156 n 156 GLY 156 A ASN 157 n 157 ASN 157 A PRO 158 n 158 PRO 158 A HIS 159 n 159 HIS 159 A CYS 160 n 160 CYS 160 A VAL 161 n 161 VAL 161 A VAL 162 n 162 VAL 162 A GLN 163 n 163 GLN 163 A VAL 164 n 164 VAL 164 A ASP 165 n 165 ASP 165 A ASP 166 n 166 ASP 166 A ILE 167 n 167 ILE 167 A GLN 168 n 168 GLN 168 A THR 169 n 169 THR 169 A ALA 170 n 170 ALA 170 A ASN 171 n 171 ASN 171 A VAL 172 n 172 VAL 172 A GLU 173 n 173 GLU 173 A GLN 174 n 174 GLN 174 A LEU 175 n 175 LEU 175 A GLY 176 n 176 GLY 176 A PRO 177 n 177 PRO 177 A LEU 178 n 178 LEU 178 A LEU 179 n 179 LEU 179 A GLU 180 n 180 GLU 180 A SER 181 n 181 SER 181 A HIS 182 n 182 HIS 182 A GLU 183 n 183 GLU 183 A ARG 184 n 184 ARG 184 A PHE 185 n 185 PHE 185 A PRO 186 n 186 PRO 186 A GLU 187 n 187 GLU 187 A ARG 188 n 188 ARG 188 A VAL 189 n 189 VAL 189 A ASN 190 n 190 ASN 190 A ALA 191 n 191 ALA 191 A GLY 192 n 192 GLY 192 A PHE 193 n 193 PHE 193 A MET 194 n 194 MET 194 A GLN 195 n 195 GLN 195 A ILE 196 n 196 ILE 196 A ILE 197 n 197 ILE 197 A ASN 198 n 198 ASN 198 A LYS 199 n 199 LYS 199 A GLU 200 n 200 GLU 200 A HIS 201 n 201 HIS 201 A ILE 202 n 202 ILE 202 A LYS 203 n 203 LYS 203 A LEU 204 n 204 LEU 204 A ARG 205 n 205 ARG 205 A VAL 206 n 206 VAL 206 A TYR 207 n 207 TYR 207 A GLU 208 n 208 GLU 208 A ARG 209 n 209 ARG 209 A GLY 210 n 210 GLY 210 A ALA 211 n 211 ALA 211 A GLY 212 n 212 GLY 212 A GLU 213 n 213 GLU 213 A THR 214 n 214 THR 214 A GLN 215 n 215 GLN 215 A ALA 216 n 216 ALA 216 A CYS 217 n 217 CYS 217 A GLY 218 n 218 GLY 218 A SER 219 n 219 SER 219 A GLY 220 n 220 GLY 220 A ALA 221 n 221 ALA 221 A CYS 222 n 222 CYS 222 A ALA 223 n 223 ALA 223 A ALA 224 n 224 ALA 224 A VAL 225 n 225 VAL 225 A ALA 226 n 226 ALA 226 A VAL 227 n 227 VAL 227 A GLY 228 n 228 GLY 228 A ILE 229 n 229 ILE 229 A MET 230 n 230 MET 230 A GLN 231 n 231 GLN 231 A GLY 232 n 232 GLY 232 A LEU 233 n 233 LEU 233 A LEU 234 n 234 LEU 234 A ASN 235 n 235 ASN 235 A ASN 236 n 236 ASN 236 A ASN 237 n 237 ASN 237 A VAL 238 n 238 VAL 238 A GLN 239 n 239 GLN 239 A VAL 240 n 240 VAL 240 A ASP 241 n 241 ASP 241 A LEU 242 n 242 LEU 242 A PRO 243 n 243 PRO 243 A GLY 244 n 244 GLY 244 A GLY 245 n 245 GLY 245 A SER 246 n 246 SER 246 A LEU 247 n 247 LEU 247 A MET 248 n 248 MET 248 A ILE 249 n 249 ILE 249 A GLU 250 n 250 GLU 250 A TRP 251 n 251 TRP 251 A ASN 252 n 252 ASN 252 A GLY 253 n 253 GLY 253 A VAL 254 n 254 VAL 254 A GLY 255 n 255 GLY 255 A HIS 256 n 256 HIS 256 A PRO 257 n 257 PRO 257 A LEU 258 n 258 LEU 258 A TYR 259 n 259 TYR 259 A MET 260 n 260 MET 260 A THR 261 n 261 THR 261 A GLY 262 n 262 GLY 262 A GLU 263 n 263 GLU 263 A ALA 264 n 264 ALA 264 A THR 265 n 265 THR 265 A HIS 266 n 266 HIS 266 A ILE 267 n 267 ILE 267 A TYR 268 n 268 TYR 268 A ASP 269 n 269 ASP 269 A GLY 270 n 270 GLY 270 A PHE 271 n 271 PHE 271 A ILE 272 n 272 ILE 272 A THR 273 n 273 THR 273 A LEU 274 n 274 LEU 274 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 70 A O VAL 70 A N ILE 62 A N ILE 62 A N PHE 58 A N PHE 58 A O SER 98 A O SER 98 A N ILE 95 A N ILE 95 A O LEU 106 A O LEU 106 A N THR 107 A N THR 107 A O ARG 115 A O ARG 115 A N VAL 116 A N VAL 116 A O MET 260 A O MET 260 A O THR 261 A O THR 261 A N MET 248 A N MET 248 A O LEU 247 A O LEU 247 A N VAL 240 A N VAL 240 A O ASP 241 A O ASP 241 A N ILE 202 A N ILE 202 A N GLU 208 A N GLU 208 A O GLY 212 A O GLY 212 A N TYR 139 A N TYR 139 A O CYS 150 A O CYS 150 A N GLY 151 A N GLY 151 A O VAL 161 A O VAL 161 A N CYS 160 A N CYS 160 A O GLY 192 A O GLY 192 A N PHE 193 A N PHE 193 A O ARG 205 A O ARG 205 A N ILE 202 A N ILE 202 A O ASP 241 A O ASP 241 A N VAL 240 A N VAL 240 A O LEU 247 A O LEU 247 A N MET 248 A N MET 248 A O THR 261 A O THR 261 A O MET 260 A O MET 260 A N VAL 116 A N VAL 116 A O ARG 115 A O ARG 115 A N THR 107 A N THR 107 A O LEU 106 A O LEU 106 A N ILE 95 A N ILE 95 A O SER 98 A O SER 98 A N PHE 58 A N PHE 58 A O HIS 59 A O HIS 59 A N GLU 49 A N GLU 49 A O LEU 46 A O LEU 46 A N VAL 16 A N VAL 16 A O VAL 15 A O VAL 15 A N SER 4 A N SER 4 A N PHE 3 A N PHE 3 A O GLY 270 A O GLY 270 1 A HOH 464 E HOH 1 A CG GLN 72 A CG GLN 72 0 Y 1 A CD GLN 72 A CD GLN 72 0 Y 1 A OE1 GLN 72 A OE1 GLN 72 0 Y 1 A NE2 GLN 72 A NE2 GLN 72 0 Y 1 A CG LYS 101 A CG LYS 101 0 Y 1 A CD LYS 101 A CD LYS 101 0 Y 1 A CE LYS 101 A CE LYS 101 0 Y 1 A NZ LYS 101 A NZ LYS 101 0 Y 1 A LEU 9 37.11 89.15 1 A ASP 53 -171.00 110.63 1 A ASN 112 81.40 12.62 1 A GLN 146 -172.50 149.79 1 A PHE 185 -115.13 78.08 1 A ARG 188 76.84 178.73 1 A ALA 216 -173.98 130.52 0.240 0.199 0.199 0.199 2.3 30 890 17427 17427 RANDOM 1 0 0 MOLECULAR REPLACEMENT PDB entry 1GQZ Engh & Huber 2.3 30 154 2294 18 0 2122 1.41 0.006 2.3 30 2Q9H 17427 17427 0 0 0.053 0.053 1 31 99.4 0.349 2.3 2.38 5.05 0.349 1 99.8 data collection Blu-Ice phasing AMoRE refinement CNS data reduction DENZO data scaling SCALEPACK Crystal structure of the C73S mutant of diaminopimelate epimerase 1 N N 2 N N 3 N N 3 N N 4 N N A THR 26 A THR 26 HELX_P A ASN 35 A ASN 35 1 1 10 A GLY 76 A GLY 76 HELX_P A LYS 87 A LYS 87 1 2 12 A GLU 124 A GLU 124 HELX_P A ILE 128 A ILE 128 5 3 5 A ASN 171 A ASN 171 HELX_P A SER 181 A SER 181 1 4 11 A CYS 217 A CYS 217 HELX_P A GLN 231 A GLN 231 1 5 15 ISOMERASE C73S mutant, two structurally equivalent domains, apo form has an open conformation, Isomerase A ILE 128 A ILE 128 1 A PRO 129 A PRO 129 -0.09 DAPF_HAEIN UNP 1 1 P44859 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCF ARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHC VVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV DLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 1 274 2Q9H 1 274 P44859 A 1 1 274 1 CYS engineered mutation SER 73 2Q9H A P44859 UNP 73 73 10 16 anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel A GLU 69 A GLU 69 A VAL 70 A VAL 70 A PHE 58 A PHE 58 A ASN 64 A ASN 64 A ASP 94 A ASP 94 A SER 98 A SER 98 A ASN 103 A ASN 103 A VAL 108 A VAL 108 A ILE 114 A ILE 114 A ASN 117 A ASN 117 A LEU 258 A LEU 258 A GLY 262 A GLY 262 A SER 246 A SER 246 A TRP 251 A TRP 251 A ASN 237 A ASN 237 A ASP 241 A ASP 241 A HIS 201 A HIS 201 A GLU 208 A GLU 208 A GLY 212 A GLY 212 A GLU 213 A GLU 213 A TYR 139 A TYR 139 A THR 143 A THR 143 A GLN 146 A GLN 146 A SER 154 A SER 154 A PRO 158 A PRO 158 A GLN 163 A GLN 163 A ASN 190 A ASN 190 A ASN 198 A ASN 198 A HIS 201 A HIS 201 A GLU 208 A GLU 208 A ASN 237 A ASN 237 A ASP 241 A ASP 241 A SER 246 A SER 246 A TRP 251 A TRP 251 A LEU 258 A LEU 258 A GLY 262 A GLY 262 A ILE 114 A ILE 114 A ASN 117 A ASN 117 A ASN 103 A ASN 103 A VAL 108 A VAL 108 A ASP 94 A ASP 94 A SER 98 A SER 98 A PHE 58 A PHE 58 A ASN 64 A ASN 64 A GLN 44 A GLN 44 A GLU 49 A GLU 49 A ASN 11 A ASN 11 A ASP 17 A ASP 17 A GLN 2 A GLN 2 A GLY 8 A GLY 8 A THR 265 A THR 265 A PHE 271 A PHE 271 BINDING SITE FOR RESIDUE TLA A 454 A TLA 454 Software 10 BINDING SITE FOR RESIDUE ACY A 455 A ACY 455 Software 3 BINDING SITE FOR RESIDUE ACY A 456 A ACY 456 Software 3 A GLY 8 A GLY 8 10 1_555 A LEU 9 A LEU 9 10 1_555 A ASN 11 A ASN 11 10 1_555 A PHE 13 A PHE 13 10 1_555 A ASN 75 A ASN 75 10 1_555 A GLY 76 A GLY 76 10 1_555 A ALA 77 A ALA 77 10 1_555 A ARG 78 A ARG 78 10 1_555 A CYS 79 A CYS 79 10 1_555 A HOH 610 E HOH 10 1_555 A ILE 140 A ILE 140 3 1_555 A ARG 184 A ARG 184 3 1_555 A HOH 514 E HOH 3 1_555 A PRO 54 A PRO 54 3 1_555 A GLU 55 A GLU 55 3 1_555 A LYS 92 A LYS 92 3 1_555 20 C 2 2 21