0.008080
0.000000
0.000000
0.000000
0.008080
0.000000
0.000000
0.000000
0.020973
0.00000
0.00000
0.00000
Miller, D.J.
Jerga, A.
Rock, C.O.
White, S.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
123.760
123.760
47.680
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
16
1036
1046
10.1016/j.str.2008.03.019
18611377
Analysis of the Staphylococcus aureus DgkB Structure Reveals a Common Catalytic Mechanism for the Soluble Diacylglycerol Kinases.
2008
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
170
1
mirrors
CCD
2007-03-14
MARMOSAIC 300 mm CCD
Si-220
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
22-ID
APS
1.0
SYNCHROTRON
APS BEAMLINE 22-ID
37899.238
Diacylglycerol Kinase DgkB
2.7.1.107
1
man
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
152
nat
water
no
yes
(MSE)GSSHHHHHHHSSGLVPRGSH(MSE)(MSE)RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGD
ATLEAERA(MSE)HENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIP(MSE)GTVNDFGRALHIPNDI(MSE)GALDV
IIEGHSTKVDIGK(MSE)NNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFE(MSE)LPQ(MSE)KAVDLRIEY
DGNVFQGEALLFFLGLTNS(MSE)AGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHI(MSE)TLASRGEHTKHPKVIYEK
AKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE
MGSSHHHHHHHSSGLVPRGSHMMRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHEN
YDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAA
GGQLTQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGY
FTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDVFAPNDIV
NEELINNDHVDDNLIEE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
SAR1989
Staphylococcus aureus
Escherichia coli
methionine auxotroph B834
Plasmid
pAJ015
1
2.41
48.93
VAPOR DIFFUSION
8.5
drop: 0.1 M Tris pH 8.5, 9% PEG2K MME;
well: 0.1 M Tris pH 8.5, 18% PEG2K MME, VAPOR DIFFUSION, temperature 277K
277
repository
Initial release
Advisory
Refinement description
Version format compliance
1
0
2008-06-17
1
1
2011-07-13
'Apo form'
RCSB
Y
RCSB
2007-08-07
REL
REL
MG
MAGNESIUM ION
ADP
ADENOSINE-5'-DIPHOSPHATE
HOH
water
MG
501
2
MG
MG
501
A
ADP
500
3
ADP
ADP
500
A
WAT
1
4
HOH
HOH
502
A
WAT
2
4
HOH
HOH
503
A
WAT
3
4
HOH
HOH
504
A
WAT
4
4
HOH
HOH
505
A
WAT
5
4
HOH
HOH
506
A
WAT
6
4
HOH
HOH
507
A
WAT
7
4
HOH
HOH
508
A
WAT
8
4
HOH
HOH
509
A
WAT
9
4
HOH
HOH
510
A
WAT
10
4
HOH
HOH
511
A
WAT
11
4
HOH
HOH
512
A
WAT
12
4
HOH
HOH
513
A
WAT
13
4
HOH
HOH
514
A
WAT
14
4
HOH
HOH
515
A
WAT
15
4
HOH
HOH
516
A
WAT
16
4
HOH
HOH
517
A
WAT
17
4
HOH
HOH
518
A
WAT
18
4
HOH
HOH
519
A
WAT
19
4
HOH
HOH
520
A
WAT
20
4
HOH
HOH
521
A
WAT
21
4
HOH
HOH
522
A
WAT
22
4
HOH
HOH
523
A
WAT
23
4
HOH
HOH
524
A
WAT
24
4
HOH
HOH
525
A
WAT
25
4
HOH
HOH
526
A
WAT
26
4
HOH
HOH
527
A
WAT
27
4
HOH
HOH
528
A
WAT
28
4
HOH
HOH
529
A
WAT
29
4
HOH
HOH
530
A
WAT
30
4
HOH
HOH
531
A
WAT
31
4
HOH
HOH
532
A
WAT
32
4
HOH
HOH
533
A
WAT
33
4
HOH
HOH
534
A
WAT
34
4
HOH
HOH
535
A
WAT
35
4
HOH
HOH
536
A
WAT
36
4
HOH
HOH
537
A
WAT
37
4
HOH
HOH
538
A
WAT
38
4
HOH
HOH
539
A
WAT
39
4
HOH
HOH
540
A
WAT
40
4
HOH
HOH
541
A
WAT
41
4
HOH
HOH
542
A
WAT
42
4
HOH
HOH
543
A
WAT
43
4
HOH
HOH
544
A
WAT
44
4
HOH
HOH
545
A
WAT
45
4
HOH
HOH
546
A
WAT
46
4
HOH
HOH
547
A
WAT
47
4
HOH
HOH
548
A
WAT
48
4
HOH
HOH
549
A
WAT
49
4
HOH
HOH
550
A
WAT
50
4
HOH
HOH
551
A
WAT
51
4
HOH
HOH
552
A
WAT
52
4
HOH
HOH
553
A
WAT
53
4
HOH
HOH
554
A
WAT
54
4
HOH
HOH
555
A
WAT
55
4
HOH
HOH
556
A
WAT
56
4
HOH
HOH
557
A
WAT
57
4
HOH
HOH
558
A
WAT
58
4
HOH
HOH
559
A
WAT
59
4
HOH
HOH
560
A
WAT
60
4
HOH
HOH
561
A
WAT
61
4
HOH
HOH
562
A
WAT
62
4
HOH
HOH
563
A
WAT
63
4
HOH
HOH
564
A
WAT
64
4
HOH
HOH
565
A
WAT
65
4
HOH
HOH
566
A
WAT
66
4
HOH
HOH
567
A
WAT
67
4
HOH
HOH
568
A
WAT
68
4
HOH
HOH
569
A
WAT
69
4
HOH
HOH
570
A
WAT
70
4
HOH
HOH
571
A
WAT
71
4
HOH
HOH
572
A
WAT
72
4
HOH
HOH
573
A
WAT
73
4
HOH
HOH
574
A
WAT
74
4
HOH
HOH
575
A
WAT
75
4
HOH
HOH
576
A
WAT
76
4
HOH
HOH
577
A
WAT
77
4
HOH
HOH
578
A
WAT
78
4
HOH
HOH
579
A
WAT
79
4
HOH
HOH
580
A
WAT
80
4
HOH
HOH
581
A
WAT
81
4
HOH
HOH
582
A
WAT
82
4
HOH
HOH
583
A
WAT
83
4
HOH
HOH
584
A
WAT
84
4
HOH
HOH
585
A
WAT
85
4
HOH
HOH
586
A
WAT
86
4
HOH
HOH
587
A
WAT
87
4
HOH
HOH
588
A
WAT
88
4
HOH
HOH
589
A
WAT
89
4
HOH
HOH
590
A
WAT
90
4
HOH
HOH
591
A
WAT
91
4
HOH
HOH
592
A
WAT
92
4
HOH
HOH
593
A
WAT
93
4
HOH
HOH
594
A
WAT
94
4
HOH
HOH
595
A
WAT
95
4
HOH
HOH
596
A
WAT
96
4
HOH
HOH
597
A
WAT
97
4
HOH
HOH
598
A
WAT
98
4
HOH
HOH
599
A
WAT
99
4
HOH
HOH
600
A
WAT
100
4
HOH
HOH
601
A
WAT
101
4
HOH
HOH
602
A
WAT
102
4
HOH
HOH
603
A
WAT
103
4
HOH
HOH
604
A
WAT
104
4
HOH
HOH
605
A
WAT
105
4
HOH
HOH
606
A
WAT
106
4
HOH
HOH
607
A
WAT
107
4
HOH
HOH
608
A
WAT
108
4
HOH
HOH
609
A
WAT
109
4
HOH
HOH
610
A
WAT
110
4
HOH
HOH
611
A
WAT
111
4
HOH
HOH
612
A
WAT
112
4
HOH
HOH
613
A
WAT
113
4
HOH
HOH
614
A
WAT
114
4
HOH
HOH
615
A
WAT
115
4
HOH
HOH
616
A
WAT
116
4
HOH
HOH
617
A
WAT
117
4
HOH
HOH
618
A
WAT
118
4
HOH
HOH
619
A
WAT
119
4
HOH
HOH
620
A
WAT
120
4
HOH
HOH
621
A
WAT
121
4
HOH
HOH
622
A
WAT
122
4
HOH
HOH
623
A
WAT
123
4
HOH
HOH
624
A
WAT
124
4
HOH
HOH
625
A
WAT
125
4
HOH
HOH
626
A
WAT
126
4
HOH
HOH
627
A
WAT
127
4
HOH
HOH
628
A
WAT
128
4
HOH
HOH
629
A
WAT
129
4
HOH
HOH
630
A
WAT
130
4
HOH
HOH
631
A
WAT
131
4
HOH
HOH
632
A
WAT
132
4
HOH
HOH
633
A
WAT
133
4
HOH
HOH
634
A
WAT
134
4
HOH
HOH
635
A
WAT
135
4
HOH
HOH
636
A
WAT
136
4
HOH
HOH
637
A
WAT
137
4
HOH
HOH
638
A
WAT
138
4
HOH
HOH
639
A
WAT
139
4
HOH
HOH
640
A
WAT
140
4
HOH
HOH
641
A
WAT
141
4
HOH
HOH
642
A
WAT
142
4
HOH
HOH
643
A
WAT
143
4
HOH
HOH
644
A
WAT
144
4
HOH
HOH
645
A
WAT
145
4
HOH
HOH
646
A
WAT
146
4
HOH
HOH
647
A
WAT
147
4
HOH
HOH
648
A
WAT
148
4
HOH
HOH
649
A
WAT
149
4
HOH
HOH
650
A
WAT
150
4
HOH
HOH
651
A
WAT
151
4
HOH
HOH
652
A
WAT
152
4
HOH
HOH
653
A
n
1
-21
A
n
2
-20
A
n
3
-19
A
n
4
-18
A
n
5
-17
A
n
6
-16
A
n
7
-15
A
n
8
-14
A
n
9
-13
A
n
10
-12
A
n
11
-11
A
n
12
-10
A
n
13
-9
A
n
14
-8
A
n
15
-7
A
n
16
-6
A
n
17
-5
A
n
18
-4
A
GLY
-3
n
19
GLY
-3
A
ALA
-2
n
20
SER
-2
A
ALA
-1
n
21
HIS
-1
A
ALA
0
n
22
MSE
0
A
MSE
1
n
23
MSE
1
A
ARG
2
n
24
ARG
2
A
LYS
3
n
25
LYS
3
A
ARG
4
n
26
ARG
4
A
ALA
5
n
27
ALA
5
A
ARG
6
n
28
ARG
6
A
ILE
7
n
29
ILE
7
A
ILE
8
n
30
ILE
8
A
TYR
9
n
31
TYR
9
A
ASN
10
n
32
ASN
10
A
PRO
11
n
33
PRO
11
A
THR
12
n
34
THR
12
A
SER
13
n
35
SER
13
A
GLY
14
n
36
GLY
14
A
LYS
15
n
37
LYS
15
A
GLU
16
n
38
GLU
16
A
GLN
17
n
39
GLN
17
A
PHE
18
n
40
PHE
18
A
LYS
19
n
41
LYS
19
A
ARG
20
n
42
ARG
20
A
GLU
21
n
43
GLU
21
A
LEU
22
n
44
LEU
22
A
PRO
23
n
45
PRO
23
A
ASP
24
n
46
ASP
24
A
ALA
25
n
47
ALA
25
A
LEU
26
n
48
LEU
26
A
ILE
27
n
49
ILE
27
A
LYS
28
n
50
LYS
28
A
LEU
29
n
51
LEU
29
A
GLU
30
n
52
GLU
30
A
LYS
31
n
53
LYS
31
A
ALA
32
n
54
ALA
32
A
GLY
33
n
55
GLY
33
A
TYR
34
n
56
TYR
34
A
GLU
35
n
57
GLU
35
A
THR
36
n
58
THR
36
A
SER
37
n
59
SER
37
A
ALA
38
n
60
ALA
38
A
TYR
39
n
61
TYR
39
A
ALA
40
n
62
ALA
40
A
THR
41
n
63
THR
41
A
GLU
42
n
64
GLU
42
A
LYS
43
n
65
LYS
43
A
ILE
44
n
66
ILE
44
A
GLY
45
n
67
GLY
45
A
ASP
46
n
68
ASP
46
A
ALA
47
n
69
ALA
47
A
THR
48
n
70
THR
48
A
LEU
49
n
71
LEU
49
A
GLU
50
n
72
GLU
50
A
ALA
51
n
73
ALA
51
A
GLU
52
n
74
GLU
52
A
ARG
53
n
75
ARG
53
A
ALA
54
n
76
ALA
54
A
MSE
55
n
77
MSE
55
A
HIS
56
n
78
HIS
56
A
GLU
57
n
79
GLU
57
A
ASN
58
n
80
ASN
58
A
TYR
59
n
81
TYR
59
A
ASP
60
n
82
ASP
60
A
VAL
61
n
83
VAL
61
A
LEU
62
n
84
LEU
62
A
ILE
63
n
85
ILE
63
A
ALA
64
n
86
ALA
64
A
ALA
65
n
87
ALA
65
A
GLY
66
n
88
GLY
66
A
GLY
67
n
89
GLY
67
A
ASP
68
n
90
ASP
68
A
GLY
69
n
91
GLY
69
A
THR
70
n
92
THR
70
A
LEU
71
n
93
LEU
71
A
ASN
72
n
94
ASN
72
A
GLU
73
n
95
GLU
73
A
VAL
74
n
96
VAL
74
A
VAL
75
n
97
VAL
75
A
ASN
76
n
98
ASN
76
A
GLY
77
n
99
GLY
77
A
ILE
78
n
100
ILE
78
A
ALA
79
n
101
ALA
79
A
GLU
80
n
102
GLU
80
A
LYS
81
n
103
LYS
81
A
PRO
82
n
104
PRO
82
A
ASN
83
n
105
ASN
83
A
ARG
84
n
106
ARG
84
A
PRO
85
n
107
PRO
85
A
LYS
86
n
108
LYS
86
A
LEU
87
n
109
LEU
87
A
GLY
88
n
110
GLY
88
A
VAL
89
n
111
VAL
89
A
ILE
90
n
112
ILE
90
A
PRO
91
n
113
PRO
91
A
MSE
92
n
114
MSE
92
A
GLY
93
n
115
GLY
93
A
THR
94
n
116
THR
94
A
VAL
95
n
117
VAL
95
A
ASN
96
n
118
ASN
96
A
ASP
97
n
119
ASP
97
A
PHE
98
n
120
PHE
98
A
GLY
99
n
121
GLY
99
A
ARG
100
n
122
ARG
100
A
ALA
101
n
123
ALA
101
A
LEU
102
n
124
LEU
102
A
HIS
103
n
125
HIS
103
A
ILE
104
n
126
ILE
104
A
PRO
105
n
127
PRO
105
A
ASN
106
n
128
ASN
106
A
ASP
107
n
129
ASP
107
A
ILE
108
n
130
ILE
108
A
MSE
109
n
131
MSE
109
A
GLY
110
n
132
GLY
110
A
ALA
111
n
133
ALA
111
A
LEU
112
n
134
LEU
112
A
ASP
113
n
135
ASP
113
A
VAL
114
n
136
VAL
114
A
ILE
115
n
137
ILE
115
A
ILE
116
n
138
ILE
116
A
GLU
117
n
139
GLU
117
A
GLY
118
n
140
GLY
118
A
HIS
119
n
141
HIS
119
A
SER
120
n
142
SER
120
A
THR
121
n
143
THR
121
A
LYS
122
n
144
LYS
122
A
VAL
123
n
145
VAL
123
A
ASP
124
n
146
ASP
124
A
ILE
125
n
147
ILE
125
A
GLY
126
n
148
GLY
126
A
LYS
127
n
149
LYS
127
A
MSE
128
n
150
MSE
128
A
ASN
129
n
151
ASN
129
A
ASN
130
n
152
ASN
130
A
ARG
131
n
153
ARG
131
A
TYR
132
n
154
TYR
132
A
PHE
133
n
155
PHE
133
A
ILE
134
n
156
ILE
134
A
ASN
135
n
157
ASN
135
A
LEU
136
n
158
LEU
136
A
ALA
137
n
159
ALA
137
A
ALA
138
n
160
ALA
138
A
GLY
139
n
161
GLY
139
A
GLY
140
n
162
GLY
140
A
GLN
141
n
163
GLN
141
A
LEU
142
n
164
LEU
142
A
THR
143
n
165
THR
143
A
ALA
144
n
166
GLN
144
A
n
167
145
A
n
168
146
A
n
169
147
A
n
170
148
A
n
171
149
A
n
172
150
A
n
173
151
A
n
174
152
A
n
175
153
A
n
176
154
A
n
177
155
A
n
178
156
A
n
179
157
A
GLY
158
n
180
GLY
158
A
PRO
159
n
181
PRO
159
A
PHE
160
n
182
PHE
160
A
ALA
161
n
183
ALA
161
A
ALA
162
n
184
TYR
162
A
TYR
163
n
185
TYR
163
A
ILE
164
n
186
ILE
164
A
ALA
165
n
187
LYS
165
A
GLY
166
n
188
GLY
166
A
PHE
167
n
189
PHE
167
A
GLU
168
n
190
GLU
168
A
MSE
169
n
191
MSE
169
A
LEU
170
n
192
LEU
170
A
PRO
171
n
193
PRO
171
A
GLN
172
n
194
GLN
172
A
MSE
173
n
195
MSE
173
A
LYS
174
n
196
LYS
174
A
ALA
175
n
197
ALA
175
A
VAL
176
n
198
VAL
176
A
ASP
177
n
199
ASP
177
A
LEU
178
n
200
LEU
178
A
ARG
179
n
201
ARG
179
A
ILE
180
n
202
ILE
180
A
GLU
181
n
203
GLU
181
A
TYR
182
n
204
TYR
182
A
ASP
183
n
205
ASP
183
A
GLY
184
n
206
GLY
184
A
ASN
185
n
207
ASN
185
A
VAL
186
n
208
VAL
186
A
PHE
187
n
209
PHE
187
A
GLN
188
n
210
GLN
188
A
GLY
189
n
211
GLY
189
A
GLU
190
n
212
GLU
190
A
ALA
191
n
213
ALA
191
A
LEU
192
n
214
LEU
192
A
LEU
193
n
215
LEU
193
A
PHE
194
n
216
PHE
194
A
PHE
195
n
217
PHE
195
A
LEU
196
n
218
LEU
196
A
GLY
197
n
219
GLY
197
A
LEU
198
n
220
LEU
198
A
THR
199
n
221
THR
199
A
ASN
200
n
222
ASN
200
A
SER
201
n
223
SER
201
A
MSE
202
n
224
MSE
202
A
ALA
203
n
225
ALA
203
A
GLY
204
n
226
GLY
204
A
PHE
205
n
227
PHE
205
A
GLU
206
n
228
GLU
206
A
LYS
207
n
229
LYS
207
A
LEU
208
n
230
LEU
208
A
VAL
209
n
231
VAL
209
A
PRO
210
n
232
PRO
210
A
ASP
211
n
233
ASP
211
A
ALA
212
n
234
ALA
212
A
LYS
213
n
235
LYS
213
A
LEU
214
n
236
LEU
214
A
ASP
215
n
237
ASP
215
A
ASP
216
n
238
ASP
216
A
GLY
217
n
239
GLY
217
A
TYR
218
n
240
TYR
218
A
PHE
219
n
241
PHE
219
A
THR
220
n
242
THR
220
A
LEU
221
n
243
LEU
221
A
ILE
222
n
244
ILE
222
A
ILE
223
n
245
ILE
223
A
VAL
224
n
246
VAL
224
A
GLU
225
n
247
GLU
225
A
LYS
226
n
248
LYS
226
A
SER
227
n
249
SER
227
A
ASN
228
n
250
ASN
228
A
LEU
229
n
251
LEU
229
A
ALA
230
n
252
ALA
230
A
GLU
231
n
253
GLU
231
A
LEU
232
n
254
LEU
232
A
GLY
233
n
255
GLY
233
A
HIS
234
n
256
HIS
234
A
ILE
235
n
257
ILE
235
A
MSE
236
n
258
MSE
236
A
THR
237
n
259
THR
237
A
LEU
238
n
260
LEU
238
A
ALA
239
n
261
ALA
239
A
SER
240
n
262
SER
240
A
ARG
241
n
263
ARG
241
A
GLY
242
n
264
GLY
242
A
GLU
243
n
265
GLU
243
A
HIS
244
n
266
HIS
244
A
THR
245
n
267
THR
245
A
LYS
246
n
268
LYS
246
A
HIS
247
n
269
HIS
247
A
PRO
248
n
270
PRO
248
A
LYS
249
n
271
LYS
249
A
VAL
250
n
272
VAL
250
A
ILE
251
n
273
ILE
251
A
TYR
252
n
274
TYR
252
A
GLU
253
n
275
GLU
253
A
LYS
254
n
276
LYS
254
A
ALA
255
n
277
ALA
255
A
LYS
256
n
278
LYS
256
A
ALA
257
n
279
ALA
257
A
ILE
258
n
280
ILE
258
A
ASN
259
n
281
ASN
259
A
ILE
260
n
282
ILE
260
A
SER
261
n
283
SER
261
A
SER
262
n
284
SER
262
A
PHE
263
n
285
PHE
263
A
THR
264
n
286
THR
264
A
ASP
265
n
287
ASP
265
A
LEU
266
n
288
LEU
266
A
ALA
267
n
289
GLN
267
A
LEU
268
n
290
LEU
268
A
ASN
269
n
291
ASN
269
A
VAL
270
n
292
VAL
270
A
ASP
271
n
293
ASP
271
A
GLY
272
n
294
GLY
272
A
GLU
273
n
295
GLU
273
A
TYR
274
n
296
TYR
274
A
GLY
275
n
297
GLY
275
A
GLY
276
n
298
GLY
276
A
LYS
277
n
299
LYS
277
A
LEU
278
n
300
LEU
278
A
PRO
279
n
301
PRO
279
A
ALA
280
n
302
ALA
280
A
ASN
281
n
303
ASN
281
A
PHE
282
n
304
PHE
282
A
LEU
283
n
305
LEU
283
A
ASN
284
n
306
ASN
284
A
LEU
285
n
307
LEU
285
A
GLU
286
n
308
GLU
286
A
ARG
287
n
309
ARG
287
A
HIS
288
n
310
HIS
288
A
ILE
289
n
311
ILE
289
A
ASP
290
n
312
ASP
290
A
VAL
291
n
313
VAL
291
A
PHE
292
n
314
PHE
292
A
ALA
293
n
315
ALA
293
A
PRO
294
n
316
PRO
294
A
ASN
295
n
317
ASN
295
A
ASP
296
n
318
ASP
296
A
ILE
297
n
319
ILE
297
A
VAL
298
n
320
VAL
298
A
ASN
299
n
321
ASN
299
A
GLU
300
n
322
GLU
300
A
GLU
301
n
323
GLU
301
A
LEU
302
n
324
LEU
302
A
ILE
303
n
325
ILE
303
A
ASN
304
n
326
ASN
304
A
ASN
305
n
327
ASN
305
A
ASP
306
n
328
ASP
306
A
HIS
307
n
329
HIS
307
A
VAL
308
n
330
VAL
308
A
ALA
309
n
331
ASP
309
A
ALA
310
n
332
ASP
310
A
ASN
311
n
333
ASN
311
A
LEU
312
n
334
LEU
312
A
n
335
313
A
n
336
314
A
n
337
315
A
2.0622
-1.7480
-0.2376
2.8803
0.1033
1.3444
0.1358
-0.0014
-0.0199
-0.0425
-0.0911
-0.0721
-0.0260
0.0218
-0.0447
-0.0960
-0.0286
-0.0305
-0.0549
0.0365
-0.1044
refined
57.3594
39.6975
21.3913
X-RAY DIFFRACTION
15.6810
-4.5680
7.4619
3.9168
-2.0515
9.4463
-0.2467
-0.6825
0.0752
0.3456
0.1075
-0.0115
-0.2163
1.0035
0.1392
-0.1061
0.0341
-0.0068
0.2071
0.0912
-0.0736
refined
81.3782
25.7499
32.2201
X-RAY DIFFRACTION
6.9970
-0.8824
0.6812
1.0319
0.1919
0.3777
-0.0669
-0.3633
-0.4159
-0.0507
-0.0118
0.0378
0.2378
0.0558
0.0787
-0.0420
0.0383
-0.0131
-0.0841
0.0724
-0.0819
refined
80.6206
19.0486
24.3563
X-RAY DIFFRACTION
7.3962
0.3019
1.1521
8.6303
-2.0601
6.0806
0.0492
0.3618
-0.1648
-0.2852
0.0725
0.2903
-0.1564
-0.0423
-0.1217
0.0080
0.0769
0.0515
-0.0552
0.0114
-0.1495
refined
91.7559
22.5470
17.5372
X-RAY DIFFRACTION
7.9025
-1.4924
0.3437
4.0166
0.4875
2.1110
-0.1975
-1.1044
-0.5486
0.3938
0.1936
0.0906
0.1500
0.0248
0.0040
-0.1043
0.0492
-0.0183
-0.0193
0.1247
-0.1161
refined
73.7884
19.2829
29.7515
X-RAY DIFFRACTION
10.3742
-4.1852
4.0752
17.2624
-5.9460
8.7137
0.5359
1.9443
-0.0013
-1.1273
-0.4027
-0.0158
0.0786
0.5026
-0.1331
0.0033
0.1568
-0.0567
0.1301
-0.0350
-0.2182
refined
64.0648
29.3605
3.5840
X-RAY DIFFRACTION
A
1
A
124
X-RAY DIFFRACTION
1
A
135
A
144
X-RAY DIFFRACTION
2
A
166
A
200
X-RAY DIFFRACTION
3
A
207
A
229
X-RAY DIFFRACTION
3
A
230
A
249
X-RAY DIFFRACTION
4
A
250
A
286
X-RAY DIFFRACTION
5
A
296
A
312
X-RAY DIFFRACTION
6
software_defined_assembly
PISA
1
monomeric
author_defined_assembly
2
dimeric
A
LYS
213
A
O
LYS
235
1_555
A
MG
501
B
MG
MG
1_555
A
ASP
216
A
OD2
ASP
238
1_555
84.6
A
LYS
213
A
O
LYS
235
1_555
A
MG
501
B
MG
MG
1_555
A
TYR
218
A
O
TYR
240
1_555
171.4
A
ASP
216
A
OD2
ASP
238
1_555
A
MG
501
B
MG
MG
1_555
A
TYR
218
A
O
TYR
240
1_555
89.4
A
LYS
213
A
O
LYS
235
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
582
D
O
HOH
1_555
87.3
A
ASP
216
A
OD2
ASP
238
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
582
D
O
HOH
1_555
83.8
A
TYR
218
A
O
TYR
240
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
582
D
O
HOH
1_555
98.1
A
LYS
213
A
O
LYS
235
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
531
D
O
HOH
1_555
90.9
A
ASP
216
A
OD2
ASP
238
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
531
D
O
HOH
1_555
166.0
A
TYR
218
A
O
TYR
240
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
531
D
O
HOH
1_555
96.4
A
HOH
582
D
O
HOH
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
531
D
O
HOH
1_555
82.8
A
LYS
213
A
O
LYS
235
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
511
D
O
HOH
1_555
84.4
A
ASP
216
A
OD2
ASP
238
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
511
D
O
HOH
1_555
98.7
A
TYR
218
A
O
TYR
240
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
511
D
O
HOH
1_555
90.5
A
HOH
582
D
O
HOH
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
511
D
O
HOH
1_555
171.0
A
HOH
531
D
O
HOH
1_555
A
MG
501
B
MG
MG
1_555
A
HOH
511
D
O
HOH
1_555
94.0
A
MSE
0
SELENOMETHIONINE
A
MSE
22
MET
A
MSE
1
SELENOMETHIONINE
A
MSE
23
MET
A
MSE
55
SELENOMETHIONINE
A
MSE
77
MET
A
MSE
92
SELENOMETHIONINE
A
MSE
114
MET
A
MSE
109
SELENOMETHIONINE
A
MSE
131
MET
A
MSE
128
SELENOMETHIONINE
A
MSE
150
MET
A
MSE
169
SELENOMETHIONINE
A
MSE
191
MET
A
MSE
173
SELENOMETHIONINE
A
MSE
195
MET
A
MSE
202
SELENOMETHIONINE
A
MSE
224
MET
A
MSE
236
SELENOMETHIONINE
A
MSE
258
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
47.6800000000
A
O
GLU
35
A
O
GLU
57
A
N
LYS
3
A
N
LYS
25
A
N
ILE
8
A
N
ILE
30
A
O
ILE
63
A
O
ILE
85
A
N
ALA
64
A
N
ALA
86
A
O
GLY
88
A
O
GLY
110
A
O
ARG
131
A
O
ARG
153
A
N
MSE
128
A
N
MSE
150
A
N
THR
121
A
N
THR
143
A
O
VAL
291
A
O
VAL
313
A
O
PHE
282
A
O
PHE
304
A
N
ILE
258
A
N
ILE
280
A
O
ASN
259
A
O
ASN
281
A
N
GLU
181
A
N
GLU
203
A
N
ILE
180
A
N
ILE
202
A
O
PHE
187
A
O
PHE
209
A
N
GLY
197
A
N
GLY
219
A
O
THR
220
A
O
THR
242
A
N
ILE
223
A
N
ILE
245
A
O
ILE
251
A
O
ILE
273
A
O
ARG
131
A
O
ARG
153
A
N
MSE
128
A
N
MSE
150
A
N
THR
121
A
N
THR
143
A
O
VAL
291
A
O
VAL
313
A
O
PHE
282
A
O
PHE
304
A
N
ILE
258
A
N
ILE
280
A
O
ASN
259
A
O
ASN
281
A
N
GLU
181
A
N
GLU
203
A
N
ILE
180
A
N
ILE
202
A
O
PHE
187
A
O
PHE
209
A
O
LEU
196
A
O
LEU
218
A
N
ALA
137
A
N
ALA
159
A
N
ALA
138
A
N
ALA
160
A
O
ASN
269
A
O
ASN
291
A
N
VAL
270
A
N
VAL
292
A
O
GLU
273
A
O
GLU
295
1
A
OG
SER
-2
A
OG
SER
20
1
Y
1
A
CG
HIS
-1
A
CG
HIS
21
1
Y
1
A
ND1
HIS
-1
A
ND1
HIS
21
1
Y
1
A
CD2
HIS
-1
A
CD2
HIS
21
1
Y
1
A
CE1
HIS
-1
A
CE1
HIS
21
1
Y
1
A
NE2
HIS
-1
A
NE2
HIS
21
1
Y
1
A
CG
MSE
0
A
CG
MSE
22
1
Y
1
A
SE
MSE
0
A
SE
MSE
22
1
Y
1
A
CE
MSE
0
A
CE
MSE
22
1
Y
1
A
CG
GLN
144
A
CG
GLN
166
1
Y
1
A
CD
GLN
144
A
CD
GLN
166
1
Y
1
A
OE1
GLN
144
A
OE1
GLN
166
1
Y
1
A
NE2
GLN
144
A
NE2
GLN
166
1
Y
1
A
CG
TYR
162
A
CG
TYR
184
1
Y
1
A
CD1
TYR
162
A
CD1
TYR
184
1
Y
1
A
CD2
TYR
162
A
CD2
TYR
184
1
Y
1
A
CE1
TYR
162
A
CE1
TYR
184
1
Y
1
A
CE2
TYR
162
A
CE2
TYR
184
1
Y
1
A
CZ
TYR
162
A
CZ
TYR
184
1
Y
1
A
OH
TYR
162
A
OH
TYR
184
1
Y
1
A
CG
LYS
165
A
CG
LYS
187
1
Y
1
A
CD
LYS
165
A
CD
LYS
187
1
Y
1
A
CE
LYS
165
A
CE
LYS
187
1
Y
1
A
NZ
LYS
165
A
NZ
LYS
187
1
Y
1
A
CG
GLN
267
A
CG
GLN
289
1
Y
1
A
CD
GLN
267
A
CD
GLN
289
1
Y
1
A
OE1
GLN
267
A
OE1
GLN
289
1
Y
1
A
NE2
GLN
267
A
NE2
GLN
289
1
Y
1
A
CG
ASP
309
A
CG
ASP
331
1
Y
1
A
OD1
ASP
309
A
OD1
ASP
331
1
Y
1
A
OD2
ASP
309
A
OD2
ASP
331
1
Y
1
A
CG
ASP
310
A
CG
ASP
332
1
Y
1
A
OD1
ASP
310
A
OD1
ASP
332
1
Y
1
A
OD2
ASP
310
A
OD2
ASP
332
1
Y
1
A
MSE
-21
A
MSE
1
1
Y
1
A
GLY
-20
A
GLY
2
1
Y
1
A
SER
-19
A
SER
3
1
Y
1
A
SER
-18
A
SER
4
1
Y
1
A
HIS
-17
A
HIS
5
1
Y
1
A
HIS
-16
A
HIS
6
1
Y
1
A
HIS
-15
A
HIS
7
1
Y
1
A
HIS
-14
A
HIS
8
1
Y
1
A
HIS
-13
A
HIS
9
1
Y
1
A
HIS
-12
A
HIS
10
1
Y
1
A
HIS
-11
A
HIS
11
1
Y
1
A
SER
-10
A
SER
12
1
Y
1
A
SER
-9
A
SER
13
1
Y
1
A
GLY
-8
A
GLY
14
1
Y
1
A
LEU
-7
A
LEU
15
1
Y
1
A
VAL
-6
A
VAL
16
1
Y
1
A
PRO
-5
A
PRO
17
1
Y
1
A
ARG
-4
A
ARG
18
1
Y
1
A
VAL
145
A
VAL
167
1
Y
1
A
SER
146
A
SER
168
1
Y
1
A
TYR
147
A
TYR
169
1
Y
1
A
GLU
148
A
GLU
170
1
Y
1
A
THR
149
A
THR
171
1
Y
1
A
PRO
150
A
PRO
172
1
Y
1
A
SER
151
A
SER
173
1
Y
1
A
LYS
152
A
LYS
174
1
Y
1
A
LEU
153
A
LEU
175
1
Y
1
A
LYS
154
A
LYS
176
1
Y
1
A
SER
155
A
SER
177
1
Y
1
A
ILE
156
A
ILE
178
1
Y
1
A
VAL
157
A
VAL
179
1
Y
1
A
ILE
313
A
ILE
335
1
Y
1
A
GLU
314
A
GLU
336
1
Y
1
A
GLU
315
A
GLU
337
1
Y
1
A
ASN
129
51.09
-105.56
1
A
LYS
165
-102.04
78.99
1
A
LEU
193
-170.82
144.32
1
A
LEU
198
-106.12
-65.07
1
A
MSE
202
-141.84
-155.23
34.138
0.00
0.00
0.00
0.00
0.00
-0.01
0.939
0.916
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2464
0.20648
0.20845
2.30
29.17
857
16997
16069
5.1
99.58
10.497
0.156
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
Rigid body refinement of DgkB
0.312
0.228
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
2.30
29.17
152
2504
28
0
2324
0.007
0.022
2393
1.122
1.985
3240
5.887
5.000
301
39.929
25.093
108
14.053
15.000
406
17.523
15.000
11
0.061
0.200
363
0.003
0.020
1801
0.177
0.200
1050
0.300
0.200
1583
0.107
0.200
183
0.171
0.200
23
0.189
0.200
11
0.430
1.500
1542
0.676
2.000
2388
1.093
3.000
953
1.603
4.500
852
0.285
0.218
2.360
81
1130
20
99.34
2.3
30
2QV7
17025
16997
0
0
0.128
1
24.5
12.2
99.8
0.431
2.3
2.38
4.2
1667
1
8.3
99.8
refinement
REFMAC
5.2.0005
data collection
HKL-2000
data reduction
HKL-2000
data scaling
HKL-2000
phasing
DgkB
model used for rigid body refinement
Diacylglycerol Kinase DgkB (E.C.2.7.1.107 )
Crystal Structure of Diacylglycerol Kinase DgkB in complex with ADP and Mg
1
N
N
2
N
N
3
N
N
4
N
N
A
GLN
17
A
GLN
39
HELX_P
A
ALA
32
A
ALA
54
1
1
16
A
GLY
45
A
GLY
67
HELX_P
A
MSE
55
A
MSE
77
1
2
11
A
GLY
67
A
GLY
89
HELX_P
A
ALA
79
A
ALA
101
1
3
13
A
ASN
96
A
ASN
118
HELX_P
A
LEU
102
A
LEU
124
1
4
7
A
ASP
107
A
ASP
129
HELX_P
A
GLY
118
A
GLY
140
1
5
12
A
GLY
158
A
GLY
180
HELX_P
A
TYR
162
A
TYR
184
5
6
5
A
MSE
169
A
MSE
191
HELX_P
A
MSE
173
A
MSE
195
5
7
5
A
ASN
228
A
ASN
250
HELX_P
A
SER
240
A
SER
262
1
8
13
A
ARG
241
A
ARG
263
HELX_P
A
GLY
242
A
GLY
264
5
9
2
A
GLU
243
A
GLU
265
HELX_P
A
HIS
247
A
HIS
269
5
10
5
metalc
2.188
A
LYS
213
A
O
LYS
235
1_555
A
MG
501
B
MG
MG
1_555
metalc
2.338
A
ASP
216
A
OD2
ASP
238
1_555
A
MG
501
B
MG
MG
1_555
metalc
2.239
A
TYR
218
A
O
TYR
240
1_555
A
MG
501
B
MG
MG
1_555
metalc
2.192
A
MG
501
B
MG
MG
1_555
A
HOH
582
D
O
HOH
1_555
metalc
2.381
A
MG
501
B
MG
MG
1_555
A
HOH
531
D
O
HOH
1_555
metalc
2.264
A
MG
501
B
MG
MG
1_555
A
HOH
511
D
O
HOH
1_555
covale
1.331
A
HIS
-1
A
C
HIS
21
1_555
A
MSE
0
A
N
MSE
22
1_555
covale
1.331
A
MSE
0
A
C
MSE
22
1_555
A
MSE
1
A
N
MSE
23
1_555
covale
1.330
A
MSE
1
A
C
MSE
23
1_555
A
ARG
2
A
N
ARG
24
1_555
covale
1.334
A
ALA
54
A
C
ALA
76
1_555
A
MSE
55
A
N
MSE
77
1_555
covale
1.334
A
MSE
55
A
C
MSE
77
1_555
A
HIS
56
A
N
HIS
78
1_555
covale
1.329
A
PRO
91
A
C
PRO
113
1_555
A
MSE
92
A
N
MSE
114
1_555
covale
1.327
A
MSE
92
A
C
MSE
114
1_555
A
GLY
93
A
N
GLY
115
1_555
covale
1.329
A
ILE
108
A
C
ILE
130
1_555
A
MSE
109
A
N
MSE
131
1_555
covale
1.333
A
MSE
109
A
C
MSE
131
1_555
A
GLY
110
A
N
GLY
132
1_555
covale
1.329
A
LYS
127
A
C
LYS
149
1_555
A
MSE
128
A
N
MSE
150
1_555
covale
1.330
A
MSE
128
A
C
MSE
150
1_555
A
ASN
129
A
N
ASN
151
1_555
covale
1.334
A
GLU
168
A
C
GLU
190
1_555
A
MSE
169
A
N
MSE
191
1_555
covale
1.330
A
MSE
169
A
C
MSE
191
1_555
A
LEU
170
A
N
LEU
192
1_555
covale
1.329
A
GLN
172
A
C
GLN
194
1_555
A
MSE
173
A
N
MSE
195
1_555
covale
1.330
A
MSE
173
A
C
MSE
195
1_555
A
LYS
174
A
N
LYS
196
1_555
covale
1.329
A
SER
201
A
C
SER
223
1_555
A
MSE
202
A
N
MSE
224
1_555
covale
1.332
A
MSE
202
A
C
MSE
224
1_555
A
ALA
203
A
N
ALA
225
1_555
covale
1.332
A
ILE
235
A
C
ILE
257
1_555
A
MSE
236
A
N
MSE
258
1_555
covale
1.330
A
MSE
236
A
C
MSE
258
1_555
A
THR
237
A
N
THR
259
1_555
TRANSFERASE
alpha-beta domain 1, beta sandwich domain 2, Protein-ADP complex, TRANSFERASE
A
LEU
278
A
LEU
300
1
A
PRO
279
A
PRO
301
2.84
Q6GFF9_STAAR
UNP
1
1
Q6GFF9
MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAE
KPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPF
AYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLAS
RGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE
1
315
2QV7
1
315
Q6GFF9
A
1
23
337
1
EXPRESSION TAG
MSE
-21
2QV7
A
Q6GFF9
UNP
1
1
EXPRESSION TAG
GLY
-20
2QV7
A
Q6GFF9
UNP
2
1
EXPRESSION TAG
SER
-19
2QV7
A
Q6GFF9
UNP
3
1
EXPRESSION TAG
SER
-18
2QV7
A
Q6GFF9
UNP
4
1
EXPRESSION TAG
HIS
-17
2QV7
A
Q6GFF9
UNP
5
1
EXPRESSION TAG
HIS
-16
2QV7
A
Q6GFF9
UNP
6
1
EXPRESSION TAG
HIS
-15
2QV7
A
Q6GFF9
UNP
7
1
EXPRESSION TAG
HIS
-14
2QV7
A
Q6GFF9
UNP
8
1
EXPRESSION TAG
HIS
-13
2QV7
A
Q6GFF9
UNP
9
1
EXPRESSION TAG
HIS
-12
2QV7
A
Q6GFF9
UNP
10
1
EXPRESSION TAG
HIS
-11
2QV7
A
Q6GFF9
UNP
11
1
EXPRESSION TAG
SER
-10
2QV7
A
Q6GFF9
UNP
12
1
EXPRESSION TAG
SER
-9
2QV7
A
Q6GFF9
UNP
13
1
EXPRESSION TAG
GLY
-8
2QV7
A
Q6GFF9
UNP
14
1
EXPRESSION TAG
LEU
-7
2QV7
A
Q6GFF9
UNP
15
1
EXPRESSION TAG
VAL
-6
2QV7
A
Q6GFF9
UNP
16
1
EXPRESSION TAG
PRO
-5
2QV7
A
Q6GFF9
UNP
17
1
EXPRESSION TAG
ARG
-4
2QV7
A
Q6GFF9
UNP
18
1
EXPRESSION TAG
GLY
-3
2QV7
A
Q6GFF9
UNP
19
1
EXPRESSION TAG
SER
-2
2QV7
A
Q6GFF9
UNP
20
1
EXPRESSION TAG
HIS
-1
2QV7
A
Q6GFF9
UNP
21
1
EXPRESSION TAG
MSE
0
2QV7
A
Q6GFF9
UNP
22
4
8
9
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
34
A
TYR
56
A
ALA
40
A
ALA
62
A
LYS
3
A
LYS
25
A
TYR
9
A
TYR
31
A
VAL
61
A
VAL
83
A
GLY
66
A
GLY
88
A
LYS
86
A
LYS
108
A
PRO
91
A
PRO
113
A
ARG
131
A
ARG
153
A
PHE
133
A
PHE
155
A
SER
120
A
SER
142
A
MSE
128
A
MSE
150
A
ALA
280
A
ALA
302
A
PHE
292
A
PHE
314
A
ALA
257
A
ALA
279
A
SER
261
A
SER
283
A
VAL
176
A
VAL
198
A
TYR
182
A
TYR
204
A
ASN
185
A
ASN
207
A
GLY
197
A
GLY
219
A
PHE
219
A
PHE
241
A
GLU
225
A
GLU
247
A
VAL
250
A
VAL
272
A
ALA
255
A
ALA
277
A
ARG
131
A
ARG
153
A
PHE
133
A
PHE
155
A
SER
120
A
SER
142
A
MSE
128
A
MSE
150
A
ALA
280
A
ALA
302
A
PHE
292
A
PHE
314
A
ALA
257
A
ALA
279
A
SER
261
A
SER
283
A
VAL
176
A
VAL
198
A
TYR
182
A
TYR
204
A
ASN
185
A
ASN
207
A
GLY
197
A
GLY
219
A
LEU
136
A
LEU
158
A
GLY
140
A
GLY
162
A
GLN
267
A
GLN
289
A
VAL
270
A
VAL
292
A
GLU
273
A
GLU
295
A
LYS
277
A
LYS
299
BINDING SITE FOR RESIDUE MG A 501
Software
6
BINDING SITE FOR RESIDUE ADP A 500
Software
17
A
LYS
213
A
LYS
235
6
1_555
A
ASP
216
A
ASP
238
6
1_555
A
TYR
218
A
TYR
240
6
1_555
A
HOH
511
D
HOH
6
1_555
A
HOH
531
D
HOH
6
1_555
A
HOH
582
D
HOH
6
1_555
A
ASN
10
A
ASN
32
17
1_555
A
THR
12
A
THR
34
17
1_555
A
SER
13
A
SER
35
17
1_555
A
GLY
14
A
GLY
36
17
1_555
A
THR
41
A
THR
63
17
1_555
A
GLU
42
A
GLU
64
17
1_555
A
LYS
43
A
LYS
65
17
1_555
A
ILE
44
A
ILE
66
17
1_555
A
GLY
66
A
GLY
88
17
1_555
A
GLY
67
A
GLY
89
17
1_555
A
GLY
69
A
GLY
91
17
1_555
A
THR
70
A
THR
92
17
1_555
A
GLU
73
A
GLU
95
17
1_555
A
GLY
93
A
GLY
115
17
1_555
A
THR
94
A
THR
116
17
1_555
A
HOH
527
D
HOH
17
1_555
A
HOH
625
D
HOH
17
1_555
94
P 42 21 2