0.007524
0.004344
0.000000
0.000000
0.008688
0.000000
0.000000
0.000000
0.013712
0.00000
0.00000
0.00000
Ho, W.W.
Li, H.
Poulos, T.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
132.913
132.913
72.930
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
C
Y
141
N
C
Y
142
N
C
Y
143
N
C
Y
144
N
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
Y
175
N
N
N
176
N
N
Y
177
N
N
N
178
N
N
N
179
N
FE
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
N
370
N
O
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
S
N
380
N
O
N
381
N
O
N
382
N
O
N
383
N
O
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
R
C
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
N
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
N
439
N
O
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
N
N
453
S
C
N
454
N
C
N
455
N
O
N
456
N
C
N
457
N
C
N
458
N
C
N
459
N
O
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
sing
Y
174
N
sing
Y
175
N
doub
N
176
N
sing
Y
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
sing
Y
223
N
doub
Y
224
N
doub
N
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
Y
431
N
doub
Y
432
N
sing
Y
433
N
sing
N
434
N
sing
Y
435
N
doub
N
436
N
sing
Y
437
N
doub
N
438
N
sing
Y
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
doub
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
282
35796
35802
10.1074/jbc.M706761200
17925389
Holo- and apo-bound structures of bacterial periplasmic heme-binding proteins.
2007
10.2210/pdb2r79/pdb
pdb_00002r79
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
1
100
1
mirrors
CCD
2007-03-23
ADSC QUANTUM 4
mirrors
CCD
2007-03-23
ADSC QUANTUM 4
mirrors
CCD
2007-03-24
ADSC QUANTUM 4
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
GRAPHITE
MAD
M
x-ray
2
GRAPHITE
MAD
M
x-ray
3
1.00
1.0
1.74
1.0
1.65
1.0
BL1-5
SSRL
1.00
SYNCHROTRON
SSRL BEAMLINE BL1-5
BL1-5
SSRL
1.74, 1.65
SYNCHROTRON
SSRL BEAMLINE BL1-5
BL1-5
SSRL
1.74, 1.65
SYNCHROTRON
SSRL BEAMLINE BL1-5
29594.686
Periplasmic binding protein
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
158
nat
water
no
no
LPQRWVSAGGSLSEWVVALGGESKLVGVDTTSQHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEG
AGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGR
NTGGDWVLNRAGARNLATHEGYKPISVEALAALDPVAVVIADRSLEGDAARAALLKQNPGLAPTRAARDGRLLVLDPTLL
VGGLGPRLPDGLAALSAAFYPSAKPLSTEAAHPLLGDDSTRTG
LPQRWVSAGGSLSEWVVALGGESKLVGVDTTSQHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEG
AGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGR
NTGGDWVLNRAGARNLATHEGYKPISVEALAALDPVAVVIADRSLEGDAARAALLKQNPGLAPTRAARDGRLLVLDPTLL
VGGLGPRLPDGLAALSAAFYPSAKPLSTEAAHPLLGDDSTRTG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pseudomonas
PA01 from ATCC
Escherichia
Escherichia coli
sample
287
Pseudomonas aeruginosa
511693
Escherichia coli BL21
BL21
plasmid
pET 101/D-TOPO
3
3.13
60.67
VAPOR DIFFUSION, HANGING DROP
6.5
0.1M sodium cacodylate, 0.25M sodium chloride, 1.8M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Non-polymer description
Version format compliance
Data collection
Database references
Derived calculations
1
0
2007-10-09
1
1
2011-07-13
1
2
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2007-09-07
REL
REL
SO4
SULFATE ION
HEM
PROTOPORPHYRIN IX CONTAINING FE
GOL
GLYCEROL
HOH
water
SO4
900
2
SO4
SO4
900
A
SO4
910
2
SO4
SO4
910
A
HEM
500
3
HEM
HEM
500
A
GOL
880
4
GOL
GOL
880
A
GOL
890
4
GOL
GOL
890
A
HOH
1
5
HOH
HOH
911
A
HOH
2
5
HOH
HOH
912
A
HOH
3
5
HOH
HOH
913
A
HOH
4
5
HOH
HOH
914
A
HOH
5
5
HOH
HOH
915
A
HOH
6
5
HOH
HOH
916
A
HOH
7
5
HOH
HOH
917
A
HOH
8
5
HOH
HOH
918
A
HOH
9
5
HOH
HOH
919
A
HOH
10
5
HOH
HOH
920
A
HOH
11
5
HOH
HOH
921
A
HOH
12
5
HOH
HOH
922
A
HOH
13
5
HOH
HOH
923
A
HOH
14
5
HOH
HOH
924
A
HOH
15
5
HOH
HOH
925
A
HOH
16
5
HOH
HOH
926
A
HOH
17
5
HOH
HOH
927
A
HOH
18
5
HOH
HOH
928
A
HOH
19
5
HOH
HOH
929
A
HOH
20
5
HOH
HOH
930
A
HOH
21
5
HOH
HOH
931
A
HOH
22
5
HOH
HOH
932
A
HOH
23
5
HOH
HOH
933
A
HOH
24
5
HOH
HOH
934
A
HOH
25
5
HOH
HOH
935
A
HOH
26
5
HOH
HOH
936
A
HOH
27
5
HOH
HOH
937
A
HOH
28
5
HOH
HOH
938
A
HOH
29
5
HOH
HOH
939
A
HOH
30
5
HOH
HOH
940
A
HOH
31
5
HOH
HOH
941
A
HOH
32
5
HOH
HOH
942
A
HOH
33
5
HOH
HOH
943
A
HOH
34
5
HOH
HOH
944
A
HOH
35
5
HOH
HOH
945
A
HOH
36
5
HOH
HOH
946
A
HOH
37
5
HOH
HOH
947
A
HOH
38
5
HOH
HOH
948
A
HOH
39
5
HOH
HOH
949
A
HOH
40
5
HOH
HOH
950
A
HOH
41
5
HOH
HOH
951
A
HOH
42
5
HOH
HOH
952
A
HOH
43
5
HOH
HOH
953
A
HOH
44
5
HOH
HOH
954
A
HOH
45
5
HOH
HOH
955
A
HOH
46
5
HOH
HOH
956
A
HOH
47
5
HOH
HOH
957
A
HOH
48
5
HOH
HOH
958
A
HOH
49
5
HOH
HOH
959
A
HOH
50
5
HOH
HOH
960
A
HOH
51
5
HOH
HOH
961
A
HOH
52
5
HOH
HOH
962
A
HOH
53
5
HOH
HOH
963
A
HOH
54
5
HOH
HOH
964
A
HOH
55
5
HOH
HOH
965
A
HOH
56
5
HOH
HOH
966
A
HOH
57
5
HOH
HOH
967
A
HOH
58
5
HOH
HOH
968
A
HOH
59
5
HOH
HOH
969
A
HOH
60
5
HOH
HOH
970
A
HOH
61
5
HOH
HOH
971
A
HOH
62
5
HOH
HOH
972
A
HOH
63
5
HOH
HOH
973
A
HOH
64
5
HOH
HOH
974
A
HOH
65
5
HOH
HOH
975
A
HOH
66
5
HOH
HOH
976
A
HOH
67
5
HOH
HOH
977
A
HOH
68
5
HOH
HOH
978
A
HOH
69
5
HOH
HOH
979
A
HOH
70
5
HOH
HOH
980
A
HOH
71
5
HOH
HOH
981
A
HOH
72
5
HOH
HOH
982
A
HOH
73
5
HOH
HOH
983
A
HOH
74
5
HOH
HOH
984
A
HOH
75
5
HOH
HOH
985
A
HOH
76
5
HOH
HOH
986
A
HOH
77
5
HOH
HOH
987
A
HOH
78
5
HOH
HOH
988
A
HOH
79
5
HOH
HOH
989
A
HOH
80
5
HOH
HOH
990
A
HOH
81
5
HOH
HOH
991
A
HOH
82
5
HOH
HOH
992
A
HOH
83
5
HOH
HOH
993
A
HOH
84
5
HOH
HOH
994
A
HOH
85
5
HOH
HOH
995
A
HOH
86
5
HOH
HOH
996
A
HOH
87
5
HOH
HOH
997
A
HOH
88
5
HOH
HOH
998
A
HOH
89
5
HOH
HOH
999
A
HOH
90
5
HOH
HOH
1000
A
HOH
91
5
HOH
HOH
1001
A
HOH
92
5
HOH
HOH
1002
A
HOH
93
5
HOH
HOH
1003
A
HOH
94
5
HOH
HOH
1004
A
HOH
95
5
HOH
HOH
1005
A
HOH
96
5
HOH
HOH
1006
A
HOH
97
5
HOH
HOH
1007
A
HOH
98
5
HOH
HOH
1008
A
HOH
99
5
HOH
HOH
1009
A
HOH
100
5
HOH
HOH
1010
A
HOH
101
5
HOH
HOH
1011
A
HOH
102
5
HOH
HOH
1012
A
HOH
103
5
HOH
HOH
1013
A
HOH
104
5
HOH
HOH
1014
A
HOH
105
5
HOH
HOH
1015
A
HOH
106
5
HOH
HOH
1016
A
HOH
107
5
HOH
HOH
1017
A
HOH
108
5
HOH
HOH
1018
A
HOH
109
5
HOH
HOH
1019
A
HOH
110
5
HOH
HOH
1020
A
HOH
111
5
HOH
HOH
1021
A
HOH
112
5
HOH
HOH
1022
A
HOH
113
5
HOH
HOH
1023
A
HOH
114
5
HOH
HOH
1024
A
HOH
115
5
HOH
HOH
1025
A
HOH
116
5
HOH
HOH
1026
A
HOH
117
5
HOH
HOH
1027
A
HOH
118
5
HOH
HOH
1028
A
HOH
119
5
HOH
HOH
1029
A
HOH
120
5
HOH
HOH
1030
A
HOH
121
5
HOH
HOH
1031
A
HOH
122
5
HOH
HOH
1032
A
HOH
123
5
HOH
HOH
1033
A
HOH
124
5
HOH
HOH
1034
A
HOH
125
5
HOH
HOH
1035
A
HOH
126
5
HOH
HOH
1036
A
HOH
127
5
HOH
HOH
1037
A
HOH
128
5
HOH
HOH
1038
A
HOH
129
5
HOH
HOH
1039
A
HOH
130
5
HOH
HOH
1040
A
HOH
131
5
HOH
HOH
1041
A
HOH
132
5
HOH
HOH
1042
A
HOH
133
5
HOH
HOH
1043
A
HOH
134
5
HOH
HOH
1044
A
HOH
135
5
HOH
HOH
1045
A
HOH
136
5
HOH
HOH
1046
A
HOH
137
5
HOH
HOH
1047
A
HOH
138
5
HOH
HOH
1048
A
HOH
139
5
HOH
HOH
1049
A
HOH
140
5
HOH
HOH
1050
A
HOH
141
5
HOH
HOH
1051
A
HOH
142
5
HOH
HOH
1052
A
HOH
143
5
HOH
HOH
1053
A
HOH
144
5
HOH
HOH
1054
A
HOH
145
5
HOH
HOH
1055
A
HOH
146
5
HOH
HOH
1056
A
HOH
147
5
HOH
HOH
1057
A
HOH
148
5
HOH
HOH
1058
A
HOH
149
5
HOH
HOH
1059
A
HOH
150
5
HOH
HOH
1060
A
HOH
151
5
HOH
HOH
1061
A
HOH
152
5
HOH
HOH
1062
A
HOH
153
5
HOH
HOH
1063
A
HOH
154
5
HOH
HOH
1064
A
HOH
155
5
HOH
HOH
1065
A
HOH
156
5
HOH
HOH
1066
A
HOH
157
5
HOH
HOH
1067
A
HOH
158
5
HOH
HOH
1068
A
LEU
26
n
1
LEU
26
A
PRO
27
n
2
PRO
27
A
GLN
28
n
3
GLN
28
A
ARG
29
n
4
ARG
29
A
TRP
30
n
5
TRP
30
A
VAL
31
n
6
VAL
31
A
SER
32
n
7
SER
32
A
ALA
33
n
8
ALA
33
A
GLY
34
n
9
GLY
34
A
GLY
35
n
10
GLY
35
A
SER
36
n
11
SER
36
A
LEU
37
n
12
LEU
37
A
SER
38
n
13
SER
38
A
GLU
39
n
14
GLU
39
A
TRP
40
n
15
TRP
40
A
VAL
41
n
16
VAL
41
A
VAL
42
n
17
VAL
42
A
ALA
43
n
18
ALA
43
A
LEU
44
n
19
LEU
44
A
GLY
45
n
20
GLY
45
A
GLY
46
n
21
GLY
46
A
GLU
47
n
22
GLU
47
A
SER
48
n
23
SER
48
A
LYS
49
n
24
LYS
49
A
LEU
50
n
25
LEU
50
A
VAL
51
n
26
VAL
51
A
GLY
52
n
27
GLY
52
A
VAL
53
n
28
VAL
53
A
ASP
54
n
29
ASP
54
A
THR
55
n
30
THR
55
A
THR
56
n
31
THR
56
A
SER
57
n
32
SER
57
A
GLN
58
n
33
GLN
58
A
HIS
59
n
34
HIS
59
A
PRO
60
n
35
PRO
60
A
GLN
61
n
36
GLN
61
A
ALA
62
n
37
ALA
62
A
LEU
63
n
38
LEU
63
A
LYS
64
n
39
LYS
64
A
GLN
65
n
40
GLN
65
A
LEU
66
n
41
LEU
66
A
PRO
67
n
42
PRO
67
A
SER
68
n
43
SER
68
A
VAL
69
n
44
VAL
69
A
GLY
70
n
45
GLY
70
A
TYH
71
n
46
TYR
71
A
GLN
72
n
47
GLN
72
A
ARG
73
n
48
ARG
73
A
GLN
74
n
49
GLN
74
A
LEU
75
n
50
LEU
75
A
ALA
76
n
51
ALA
76
A
ALA
77
n
52
ALA
77
A
GLU
78
n
53
GLU
78
A
GLY
79
n
54
GLY
79
A
VAL
80
n
55
VAL
80
A
LEU
81
n
56
LEU
81
A
ALA
82
n
57
ALA
82
A
LEU
83
n
58
LEU
83
A
ARG
84
n
59
ARG
84
A
PRO
85
n
60
PRO
85
A
ASP
86
n
61
ASP
86
A
ILE
87
n
62
ILE
87
A
LEU
88
n
63
LEU
88
A
ILE
89
n
64
ILE
89
A
GLY
90
n
65
GLY
90
A
THR
91
n
66
THR
91
A
GLU
92
n
67
GLU
92
A
GLU
93
n
68
GLU
93
A
MET
94
n
69
MET
94
A
GLY
95
n
70
GLY
95
A
PRO
96
n
71
PRO
96
A
PRO
97
n
72
PRO
97
A
PRO
98
n
73
PRO
98
A
VAL
99
n
74
VAL
99
A
LEU
100
n
75
LEU
100
A
LYS
101
n
76
LYS
101
A
GLN
102
n
77
GLN
102
A
LEU
103
n
78
LEU
103
A
GLU
104
n
79
GLU
104
A
GLY
105
n
80
GLY
105
A
ALA
106
n
81
ALA
106
A
GLY
107
n
82
GLY
107
A
VAL
108
n
83
VAL
108
A
ARG
109
n
84
ARG
109
A
VAL
110
n
85
VAL
110
A
GLU
111
n
86
GLU
111
A
THR
112
n
87
THR
112
A
LEU
113
n
88
LEU
113
A
SER
114
n
89
SER
114
A
ALA
115
n
90
ALA
115
A
LYS
116
n
91
LYS
116
A
PRO
117
n
92
PRO
117
A
ASP
118
n
93
ASP
118
A
LEU
119
n
94
LEU
119
A
GLU
120
n
95
GLU
120
A
ALA
121
n
96
ALA
121
A
LEU
122
n
97
LEU
122
A
GLU
123
n
98
GLU
123
A
SER
124
n
99
SER
124
A
ASN
125
n
100
ASN
125
A
LEU
126
n
101
LEU
126
A
LYS
127
n
102
LYS
127
A
LYS
128
n
103
LYS
128
A
LEU
129
n
104
LEU
129
A
GLY
130
n
105
GLY
130
A
ASP
131
n
106
ASP
131
A
TRP
132
n
107
TRP
132
A
LEU
133
n
108
LEU
133
A
GLY
134
n
109
GLY
134
A
VAL
135
n
110
VAL
135
A
PRO
136
n
111
PRO
136
A
GLN
137
n
112
GLN
137
A
ARG
138
n
113
ARG
138
A
ALA
139
n
114
ALA
139
A
GLU
140
n
115
GLU
140
A
ALA
141
n
116
ALA
141
A
ALA
142
n
117
ALA
142
A
GLU
143
n
118
GLU
143
A
LEU
144
n
119
LEU
144
A
ASP
145
n
120
ASP
145
A
TYR
146
n
121
TYR
146
A
ARG
147
n
122
ARG
147
A
GLN
148
n
123
GLN
148
A
ARG
149
n
124
ARG
149
A
LEU
150
n
125
LEU
150
A
ARG
151
n
126
ARG
151
A
ARG
152
n
127
ARG
152
A
GLN
153
n
128
GLN
153
A
ALA
154
n
129
ALA
154
A
ASP
155
n
130
ASP
155
A
TRP
156
n
131
TRP
156
A
ILE
157
n
132
ILE
157
A
ALA
158
n
133
ALA
158
A
ALA
159
n
134
ALA
159
A
ALA
160
n
135
ALA
160
A
GLN
161
n
136
GLN
161
A
LYS
162
n
137
LYS
162
A
SER
163
n
138
SER
163
A
GLN
164
n
139
GLN
164
A
PRO
165
n
140
PRO
165
A
ALA
166
n
141
ALA
166
A
PRO
167
n
142
PRO
167
A
GLY
168
n
143
GLY
168
A
VAL
169
n
144
VAL
169
A
LEU
170
n
145
LEU
170
A
LEU
171
n
146
LEU
171
A
VAL
172
n
147
VAL
172
A
ILE
173
n
148
ILE
173
A
GLY
174
n
149
GLY
174
A
ASN
175
n
150
ASN
175
A
ALA
176
n
151
ALA
176
A
GLY
177
n
152
GLY
177
A
GLY
178
n
153
GLY
178
A
GLN
179
n
154
GLN
179
A
LEU
180
n
155
LEU
180
A
LEU
181
n
156
LEU
181
A
VAL
182
n
157
VAL
182
A
ALA
183
n
158
ALA
183
A
GLY
184
n
159
GLY
184
A
ARG
185
n
160
ARG
185
A
ASN
186
n
161
ASN
186
A
THR
187
n
162
THR
187
A
GLY
188
n
163
GLY
188
A
GLY
189
n
164
GLY
189
A
ASP
190
n
165
ASP
190
A
TRP
191
n
166
TRP
191
A
VAL
192
n
167
VAL
192
A
LEU
193
n
168
LEU
193
A
ASN
194
n
169
ASN
194
A
ARG
195
n
170
ARG
195
A
ALA
196
n
171
ALA
196
A
GLY
197
n
172
GLY
197
A
ALA
198
n
173
ALA
198
A
ARG
199
n
174
ARG
199
A
ASN
200
n
175
ASN
200
A
LEU
201
n
176
LEU
201
A
ALA
202
n
177
ALA
202
A
THR
203
n
178
THR
203
A
HIS
204
n
179
HIS
204
A
GLU
205
n
180
GLU
205
A
GLY
206
n
181
GLY
206
A
TYR
207
n
182
TYR
207
A
LYS
208
n
183
LYS
208
A
PRO
209
n
184
PRO
209
A
ILE
210
n
185
ILE
210
A
SER
211
n
186
SER
211
A
VAL
212
n
187
VAL
212
A
GLU
213
n
188
GLU
213
A
ALA
214
n
189
ALA
214
A
LEU
215
n
190
LEU
215
A
ALA
216
n
191
ALA
216
A
ALA
217
n
192
ALA
217
A
LEU
218
n
193
LEU
218
A
ASP
219
n
194
ASP
219
A
PRO
220
n
195
PRO
220
A
VAL
221
n
196
VAL
221
A
ALA
222
n
197
ALA
222
A
VAL
223
n
198
VAL
223
A
VAL
224
n
199
VAL
224
A
ILE
225
n
200
ILE
225
A
ALA
226
n
201
ALA
226
A
ASP
227
n
202
ASP
227
A
ARG
228
n
203
ARG
228
A
SER
229
n
204
SER
229
A
LEU
230
n
205
LEU
230
A
GLU
231
n
206
GLU
231
A
GLY
232
n
207
GLY
232
A
ASP
233
n
208
ASP
233
A
ALA
234
n
209
ALA
234
A
ALA
235
n
210
ALA
235
A
ARG
236
n
211
ARG
236
A
ALA
237
n
212
ALA
237
A
ALA
238
n
213
ALA
238
A
LEU
239
n
214
LEU
239
A
LEU
240
n
215
LEU
240
A
LYS
241
n
216
LYS
241
A
GLN
242
n
217
GLN
242
A
ASN
243
n
218
ASN
243
A
PRO
244
n
219
PRO
244
A
GLY
245
n
220
GLY
245
A
LEU
246
n
221
LEU
246
A
ALA
247
n
222
ALA
247
A
PRO
248
n
223
PRO
248
A
THR
249
n
224
THR
249
A
ARG
250
n
225
ARG
250
A
ALA
251
n
226
ALA
251
A
ALA
252
n
227
ALA
252
A
ARG
253
n
228
ARG
253
A
ASP
254
n
229
ASP
254
A
GLY
255
n
230
GLY
255
A
ARG
256
n
231
ARG
256
A
LEU
257
n
232
LEU
257
A
LEU
258
n
233
LEU
258
A
VAL
259
n
234
VAL
259
A
LEU
260
n
235
LEU
260
A
ASP
261
n
236
ASP
261
A
PRO
262
n
237
PRO
262
A
THR
263
n
238
THR
263
A
LEU
264
n
239
LEU
264
A
LEU
265
n
240
LEU
265
A
VAL
266
n
241
VAL
266
A
GLY
267
n
242
GLY
267
A
GLY
268
n
243
GLY
268
A
LEU
269
n
244
LEU
269
A
GLY
270
n
245
GLY
270
A
PRO
271
n
246
PRO
271
A
ARG
272
n
247
ARG
272
A
LEU
273
n
248
LEU
273
A
PRO
274
n
249
PRO
274
A
ASP
275
n
250
ASP
275
A
GLY
276
n
251
GLY
276
A
LEU
277
n
252
LEU
277
A
ALA
278
n
253
ALA
278
A
ALA
279
n
254
ALA
279
A
LEU
280
n
255
LEU
280
A
SER
281
n
256
SER
281
A
ALA
282
n
257
ALA
282
A
ALA
283
n
258
ALA
283
A
PHE
284
n
259
PHE
284
A
TYR
285
n
260
TYR
285
A
PRO
286
n
261
PRO
286
A
SER
287
n
262
SER
287
A
ALA
288
n
263
ALA
288
A
LYS
289
n
264
LYS
289
A
PRO
290
n
265
PRO
290
A
LEU
291
n
266
LEU
291
A
SER
292
n
267
SER
292
A
THR
293
n
268
THR
293
A
n
269
294
A
n
270
295
A
n
271
296
A
n
272
297
A
PRO
298
n
273
PRO
298
A
LEU
299
n
274
LEU
299
A
LEU
300
n
275
LEU
300
A
GLY
301
n
276
GLY
301
A
ASP
302
n
277
ASP
302
A
ASP
303
n
278
ASP
303
A
SER
304
n
279
SER
304
A
THR
305
n
280
THR
305
A
ARG
306
n
281
ARG
306
A
THR
307
n
282
THR
307
A
GLY
308
n
283
GLY
308
A
author_and_software_defined_assembly
PISA
6
hexameric
24130
-253
61010
A
TYR
71
A
OH
TYR
46
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
NA
HEM
1_555
96.1
A
TYR
71
A
OH
TYR
46
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
NB
HEM
1_555
92.8
A
HEM
500
D
NA
HEM
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
NB
HEM
1_555
89.6
A
TYR
71
A
OH
TYR
46
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
NC
HEM
1_555
95.3
A
HEM
500
D
NA
HEM
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
NC
HEM
1_555
168.6
A
HEM
500
D
NB
HEM
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
NC
HEM
1_555
89.2
A
TYR
71
A
OH
TYR
46
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
ND
HEM
1_555
96.9
A
HEM
500
D
NA
HEM
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
ND
HEM
1_555
90.2
A
HEM
500
D
NB
HEM
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
ND
HEM
1_555
170.3
A
HEM
500
D
NC
HEM
1_555
A
HEM
500
D
FE
HEM
1_555
A
HEM
500
D
ND
HEM
1_555
89.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_755
-y+2,x-y,z
crystal symmetry operation
265.8260000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_775
-x+y+2,-x+2,z
crystal symmetry operation
132.9130000000
230.2120689864
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_774
-y+2,-x+2,-z-1/2
crystal symmetry operation
132.9130000000
230.2120689864
-36.4650000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_754
-x+y+2,y,-z-1/2
crystal symmetry operation
265.8260000000
0.0000000000
-36.4650000000
0.5000000000
0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_554
x,x-y,-z-1/2
crystal symmetry operation
0.0000000000
0.0000000000
-36.4650000000
A
O
VAL
51
A
O
VAL
26
A
N
TRP
30
A
N
TRP
5
A
N
VAL
31
A
N
VAL
6
A
O
ILE
89
A
O
ILE
64
A
N
LEU
88
A
N
LEU
63
A
O
GLU
111
A
O
GLU
86
A
O
ARG
199
A
O
ARG
174
A
N
VAL
169
A
N
VAL
144
A
N
ILE
173
A
N
ILE
148
A
O
LEU
181
A
O
LEU
156
A
N
VAL
182
A
N
VAL
157
A
O
LYS
208
A
O
LYS
183
A
O
ARG
199
A
O
ARG
174
A
N
VAL
169
A
N
VAL
144
A
N
VAL
172
A
N
VAL
147
A
O
VAL
224
A
O
VAL
199
A
N
ILE
225
A
N
ILE
200
A
O
LEU
258
A
O
LEU
233
A
N
VAL
259
A
N
VAL
234
A
O
GLY
301
A
O
GLY
276
1
A
GLU
294
A
GLU
269
1
Y
1
A
ALA
295
A
ALA
270
1
Y
1
A
ALA
296
A
ALA
271
1
Y
1
A
HIS
297
A
HIS
272
1
Y
1
A
THR
91
-109.35
-163.38
1
A
THR
307
-136.78
-47.94
protein_rep.param
protein.top
param19x.heme2
water.top
water_rep.param
toph19x.heme2
hetero.par
hetero.top
34.6
4.35
0.00
0.00
4.35
0.00
-8.70
BULK SOLVENT MODEL USED
0.247
0.006
0.193
0.193
2.40
43.51
1476
15013
9.8
97.8
RANDOM
3016812.96
0.000000
1,2,3
RESTRAINED
THROUGHOUT
0.0
MAD
Engh & Huber
FLAT MODEL
37.2989
0.35
0.33
0.25
5.00
0.29
0.22
2.40
43.51
158
2279
65
0
2056
0.006
1.5
22.7
1.22
1.38
1.50
2.21
2.00
2.38
2.00
3.60
2.50
0.267
0.018
0.223
2.55
221
2219
6
9.1
97.8
18.6
2.4
50.0
2R79
15023
-3.0
0.1
0.1
1,2,3
24.4
8.2
97.4
2.4
2.44
4.7
735
0.53
1,2,3
8.5
96.5
refinement
CNS
1.2
data collection
ADSC
Quantum
data reduction
HKL-2000
data scaling
HKL-2000
phasing
SOLVE
Crystal Structure of a Periplasmic Heme Binding Protein from Pseudomonas aeruginosa
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
A
GLY
34
A
GLY
9
HELX_P
A
LEU
44
A
LEU
19
1
1
11
A
GLY
46
A
GLY
21
HELX_P
A
SER
48
A
SER
23
5
2
3
A
PRO
60
A
PRO
35
HELX_P
A
LEU
66
A
LEU
41
5
3
7
A
TYR
71
A
TYR
46
HELX_P
A
LEU
75
A
LEU
50
5
4
5
A
ALA
76
A
ALA
51
HELX_P
A
ALA
82
A
ALA
57
1
5
7
A
PRO
96
A
PRO
71
HELX_P
A
ALA
106
A
ALA
81
1
6
11
A
ASP
118
A
ASP
93
HELX_P
A
GLY
134
A
GLY
109
1
7
17
A
VAL
135
A
VAL
110
HELX_P
A
GLN
161
A
GLN
136
1
8
27
A
THR
187
A
THR
162
HELX_P
A
ALA
196
A
ALA
171
1
9
10
A
SER
211
A
SER
186
HELX_P
A
ASP
219
A
ASP
194
1
10
9
A
GLU
231
A
GLU
206
HELX_P
A
ASN
243
A
ASN
218
1
11
13
A
PRO
244
A
PRO
219
HELX_P
A
ALA
247
A
ALA
222
5
12
4
A
THR
249
A
THR
224
HELX_P
A
ASP
254
A
ASP
229
1
13
6
A
PRO
262
A
PRO
237
HELX_P
A
VAL
266
A
VAL
241
5
14
5
A
ARG
272
A
ARG
247
HELX_P
A
TYR
285
A
TYR
260
1
15
14
metalc
2.298
A
TYR
71
A
OH
TYR
46
1_555
A
HEM
500
D
FE
HEM
1_555
TRANSPORT PROTEIN
periplasmic binding protein, heme transport, TRANSPORT PROTEIN
A
HIS
59
A
HIS
34
1
A
PRO
60
A
PRO
35
-0.06
A
GLY
95
A
GLY
70
1
A
PRO
96
A
PRO
71
0.05
O68879_PSEAE
UNP
1
26
O68879
LPQRWVSAGGSLSEWVVALGGESKLVGVDTTSQHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEG
AGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGR
NTGGDWVLNRAGARNLATHEGYKPISVEALAALDPVAVVIADRSLEGDAARAALLKQNPGLAPTRAARDGRLLVLDPTLL
VGGLGPRLPDGLAALSAAFYPSAKPLSTEAAH
26
297
2R79
26
297
O68879
A
1
1
272
1
expression tag
PRO
298
2R79
A
O68879
UNP
273
1
expression tag
LEU
299
2R79
A
O68879
UNP
274
1
expression tag
LEU
300
2R79
A
O68879
UNP
275
1
expression tag
GLY
301
2R79
A
O68879
UNP
276
1
expression tag
ASP
302
2R79
A
O68879
UNP
277
1
expression tag
ASP
303
2R79
A
O68879
UNP
278
1
expression tag
SER
304
2R79
A
O68879
UNP
279
1
expression tag
THR
305
2R79
A
O68879
UNP
280
1
expression tag
ARG
306
2R79
A
O68879
UNP
281
1
expression tag
THR
307
2R79
A
O68879
UNP
282
1
expression tag
GLY
308
2R79
A
O68879
UNP
283
4
4
5
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
A
LEU
50
A
LEU
25
A
VAL
53
A
VAL
28
A
TRP
30
A
TRP
5
A
SER
32
A
SER
7
A
ILE
87
A
ILE
62
A
GLY
90
A
GLY
65
A
VAL
110
A
VAL
85
A
THR
112
A
THR
87
A
ARG
199
A
ARG
174
A
ASN
200
A
ASN
175
A
GLY
168
A
GLY
143
A
ASN
175
A
ASN
150
A
GLY
178
A
GLY
153
A
ALA
183
A
ALA
158
A
TYR
207
A
TYR
182
A
LYS
208
A
LYS
183
A
ARG
199
A
ARG
174
A
ASN
200
A
ASN
175
A
GLY
168
A
GLY
143
A
ASN
175
A
ASN
150
A
ALA
222
A
ALA
197
A
ASP
227
A
ASP
202
A
LEU
257
A
LEU
232
A
LEU
260
A
LEU
235
A
LEU
300
A
LEU
275
A
GLY
301
A
GLY
276
BINDING SITE FOR RESIDUE SO4 A 900
A
SO4
900
Software
6
BINDING SITE FOR RESIDUE SO4 A 910
A
SO4
910
Software
5
BINDING SITE FOR RESIDUE HEM A 500
A
HEM
500
Software
9
BINDING SITE FOR RESIDUE GOL A 880
A
GOL
880
Software
4
BINDING SITE FOR RESIDUE GOL A 890
A
GOL
890
Software
2
A
HIS
204
A
HIS
179
6
8_675
A
HIS
204
A
HIS
179
6
1_555
A
GLU
205
A
GLU
180
6
1_555
A
GLU
205
A
GLU
180
6
8_675
A
LYS
208
A
LYS
183
6
1_555
A
HOH
940
G
HOH
6
8_675
A
ASP
118
A
ASP
93
5
1_555
A
LEU
119
A
LEU
94
5
1_555
A
TRP
191
A
TRP
166
5
1_555
A
ARG
195
A
ARG
170
5
1_555
A
HOH
971
G
HOH
5
1_555
A
SER
68
A
SER
43
9
10_774
A
TYR
71
A
TYR
46
9
1_555
A
ARG
73
A
ARG
48
9
1_555
A
GLN
74
A
GLN
49
9
1_555
A
GLU
78
A
GLU
53
9
10_774
A
GLY
79
A
GLY
54
9
10_774
A
TYR
207
A
TYR
182
9
1_555
A
ARG
228
A
ARG
203
9
1_555
A
HOH
946
G
HOH
9
10_774
A
HIS
59
A
HIS
34
4
1_555
A
PRO
60
A
PRO
35
4
1_555
A
GLN
61
A
GLN
36
4
1_555
A
HOH
1036
G
HOH
4
1_555
A
ARG
250
A
ARG
225
2
1_555
A
ARG
253
A
ARG
228
2
1_555
182
P 63 2 2