0.009244 0.000000 0.000000 0.000000 0.009244 0.000000 0.000000 0.000000 0.006582 0.00000 0.00000 0.00000 Kumar, M. Prasad, B.V.V. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 108.175 108.175 151.924 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C6 H10 N3 O4 P S 251.200 n 1-thiophosphono-L-histidine L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N P N 274 N O N 275 N O N 276 N O N 277 N O N 278 N N N 279 S C N 280 N C N 281 N O N 282 N C N 283 N C N 284 N C N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C Y 298 N C Y 299 N C Y 300 N N Y 301 N C Y 302 N N N 303 N C N 304 N O N 305 R P N 306 N S N 307 N O N 308 N O N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 N C N 325 N O N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 R C N 339 N O N 340 N C N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N N Y 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N N N 379 S C N 380 N C N 381 N O N 382 N C Y 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C N 389 N O N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N N N 403 S C N 404 N C N 405 N O N 406 N C N 407 N C N 408 N C N 409 N O N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N doub Y 287 N sing Y 288 N doub N 289 N sing Y 290 N sing N 291 N sing Y 292 N sing Y 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing Y 346 N doub Y 347 N sing Y 348 N sing N 349 N sing Y 350 N doub Y 351 N sing Y 352 N sing N 353 N sing Y 354 N sing Y 355 N doub N 356 N sing Y 357 N doub N 358 N sing Y 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing Y 374 N doub Y 375 N sing Y 376 N sing N 377 N sing Y 378 N doub N 379 N sing Y 380 N doub N 381 N sing Y 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing US J.Virol. JOVIAM 0825 0022-538X 81 12272 12284 10.1128/JVI.00984-07 17804496 Crystallographic and Biochemical Analysis of Rotavirus NSP2 with Nucleotides Reveals a Nucleoside Diphosphate Kinase-Like Activity 2007 UK Nature NATUAS 0006 0028-0836 417 311 315 10.1038/417311a 12015608 Rotavirus protein involved in genome replication and packaging exhibits a HIT-like fold 2002 10.2210/pdb2r7c/pdb pdb_00002r7c 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 ADSC914_DETECTOR_DIMENSIONS=3072 3072 CCD 2005-09-21 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.9793990 1.0 19-ID APS 0.9793990 SYNCHROTRON APS BEAMLINE 19-ID 36713.297 Non-structural RNA-binding protein 35 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 18.015 water 15 nat water NSP2, NS35, NCVP3 no yes MAELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMNFETIMFTKV AMLICEALNSLKVTQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVFQ NAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHGKG(PSH)YRIVKYSSVAN HADRVYATFKSNVKTGVNNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCKRLLFQKMKPEKNPFKGLSTDRKMDEVSQVG V MAELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMNFETIMFTKV AMLICEALNSLKVTQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVFQ NAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHGKGHYRIVKYSSVANHADR VYATFKSNVKTGVNNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCKRLLFQKMKPEKNPFKGLSTDRKMDEVSQVGV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Rotavirus Rotavirus A Ramig Escherichia sample S8, SEGMENT 8 36435 Simian 11 rotavirus (serotype 3 / strain SA11-Ramig) 562 Escherichia coli SG13009 PLASMID pQE60 1 3.03 59.36 VAPOR DIFFUSION, HANGING DROP 7.5 6-8% PEG 10000, 20mM Tris-HCl pH 7.5, 10-15mM nucleotide, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn chem_comp_atom chem_comp_bond repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description Data collection 1 0 2007-10-23 1 1 2011-07-13 1 2 2023-10-25 1 3 2023-11-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 Same native protein Same protein with H225A mutation Same protein with H225A mutation with AMPPNP Same protein with H225A mutation with ATP-gS RCSB Y PDBJ 2007-09-07 REL REL PO4 PHOSPHATE ION HOH water 1L9V PDB ENTRY 1l9v PDB experimental model PO4 1 2 PO4 PO4 318 A HOH 1 3 HOH HOH 319 A HOH 2 3 HOH HOH 320 A HOH 3 3 HOH HOH 321 A HOH 4 3 HOH HOH 322 A HOH 5 3 HOH HOH 323 A HOH 6 3 HOH HOH 324 A HOH 7 3 HOH HOH 325 A HOH 8 3 HOH HOH 326 A HOH 9 3 HOH HOH 327 A HOH 10 3 HOH HOH 328 A HOH 11 3 HOH HOH 329 A HOH 12 3 HOH HOH 330 A HOH 13 3 HOH HOH 331 A HOH 14 3 HOH HOH 332 A HOH 15 3 HOH HOH 333 A n 1 1 A ALA 2 n 2 ALA 2 A GLU 3 n 3 GLU 3 A LEU 4 n 4 LEU 4 A ALA 5 n 5 ALA 5 A CYS 6 n 6 CYS 6 A PHE 7 n 7 PHE 7 A CYS 8 n 8 CYS 8 A TYR 9 n 9 TYR 9 A PRO 10 n 10 PRO 10 A HIS 11 n 11 HIS 11 A LEU 12 n 12 LEU 12 A GLU 13 n 13 GLU 13 A ASN 14 n 14 ASN 14 A ASP 15 n 15 ASP 15 A SER 16 n 16 SER 16 A TYR 17 n 17 TYR 17 A LYS 18 n 18 LYS 18 A PHE 19 n 19 PHE 19 A ILE 20 n 20 ILE 20 A PRO 21 n 21 PRO 21 A PHE 22 n 22 PHE 22 A ASN 23 n 23 ASN 23 A ASN 24 n 24 ASN 24 A LEU 25 n 25 LEU 25 A ALA 26 n 26 ALA 26 A ILE 27 n 27 ILE 27 A LYS 28 n 28 LYS 28 A ALA 29 n 29 ALA 29 A MET 30 n 30 MET 30 A LEU 31 n 31 LEU 31 A THR 32 n 32 THR 32 A ALA 33 n 33 ALA 33 A LYS 34 n 34 LYS 34 A VAL 35 n 35 VAL 35 A ASP 36 n 36 ASP 36 A LYS 37 n 37 LYS 37 A LYS 38 n 38 LYS 38 A ASP 39 n 39 ASP 39 A MET 40 n 40 MET 40 A ASP 41 n 41 ASP 41 A LYS 42 n 42 LYS 42 A PHE 43 n 43 PHE 43 A TYR 44 n 44 TYR 44 A ASP 45 n 45 ASP 45 A SER 46 n 46 SER 46 A ILE 47 n 47 ILE 47 A ILE 48 n 48 ILE 48 A TYR 49 n 49 TYR 49 A GLY 50 n 50 GLY 50 A ILE 51 n 51 ILE 51 A ALA 52 n 52 ALA 52 A PRO 53 n 53 PRO 53 A PRO 54 n 54 PRO 54 A PRO 55 n 55 PRO 55 A GLN 56 n 56 GLN 56 A PHE 57 n 57 PHE 57 A LYS 58 n 58 LYS 58 A LYS 59 n 59 LYS 59 A ARG 60 n 60 ARG 60 A TYR 61 n 61 TYR 61 A ASN 62 n 62 ASN 62 A THR 63 n 63 THR 63 A ASN 64 n 64 ASN 64 A ASP 65 n 65 ASP 65 A ASN 66 n 66 ASN 66 A SER 67 n 67 SER 67 A ARG 68 n 68 ARG 68 A GLY 69 n 69 GLY 69 A MET 70 n 70 MET 70 A ASN 71 n 71 ASN 71 A PHE 72 n 72 PHE 72 A GLU 73 n 73 GLU 73 A THR 74 n 74 THR 74 A ILE 75 n 75 ILE 75 A MET 76 n 76 MET 76 A PHE 77 n 77 PHE 77 A THR 78 n 78 THR 78 A LYS 79 n 79 LYS 79 A VAL 80 n 80 VAL 80 A ALA 81 n 81 ALA 81 A MET 82 n 82 MET 82 A LEU 83 n 83 LEU 83 A ILE 84 n 84 ILE 84 A CYS 85 n 85 CYS 85 A GLU 86 n 86 GLU 86 A ALA 87 n 87 ALA 87 A LEU 88 n 88 LEU 88 A ASN 89 n 89 ASN 89 A SER 90 n 90 SER 90 A LEU 91 n 91 LEU 91 A LYS 92 n 92 LYS 92 A VAL 93 n 93 VAL 93 A THR 94 n 94 THR 94 A GLN 95 n 95 GLN 95 A ALA 96 n 96 ALA 96 A ASN 97 n 97 ASN 97 A VAL 98 n 98 VAL 98 A SER 99 n 99 SER 99 A ASN 100 n 100 ASN 100 A VAL 101 n 101 VAL 101 A LEU 102 n 102 LEU 102 A SER 103 n 103 SER 103 A ARG 104 n 104 ARG 104 A VAL 105 n 105 VAL 105 A VAL 106 n 106 VAL 106 A SER 107 n 107 SER 107 A ILE 108 n 108 ILE 108 A ARG 109 n 109 ARG 109 A HIS 110 n 110 HIS 110 A LEU 111 n 111 LEU 111 A GLU 112 n 112 GLU 112 A ASN 113 n 113 ASN 113 A LEU 114 n 114 LEU 114 A VAL 115 n 115 VAL 115 A ILE 116 n 116 ILE 116 A ARG 117 n 117 ARG 117 A LYS 118 n 118 LYS 118 A GLU 119 n 119 GLU 119 A ASN 120 n 120 ASN 120 A PRO 121 n 121 PRO 121 A GLN 122 n 122 GLN 122 A ASP 123 n 123 ASP 123 A ILE 124 n 124 ILE 124 A LEU 125 n 125 LEU 125 A PHE 126 n 126 PHE 126 A HIS 127 n 127 HIS 127 A SER 128 n 128 SER 128 A LYS 129 n 129 LYS 129 A ASP 130 n 130 ASP 130 A LEU 131 n 131 LEU 131 A LEU 132 n 132 LEU 132 A LEU 133 n 133 LEU 133 A LYS 134 n 134 LYS 134 A SER 135 n 135 SER 135 A THR 136 n 136 THR 136 A LEU 137 n 137 LEU 137 A ILE 138 n 138 ILE 138 A ALA 139 n 139 ALA 139 A ILE 140 n 140 ILE 140 A GLY 141 n 141 GLY 141 A GLN 142 n 142 GLN 142 A SER 143 n 143 SER 143 A LYS 144 n 144 LYS 144 A GLU 145 n 145 GLU 145 A ILE 146 n 146 ILE 146 A GLU 147 n 147 GLU 147 A THR 148 n 148 THR 148 A THR 149 n 149 THR 149 A ILE 150 n 150 ILE 150 A THR 151 n 151 THR 151 A ALA 152 n 152 ALA 152 A GLU 153 n 153 GLU 153 A GLY 154 n 154 GLY 154 A GLY 155 n 155 GLY 155 A GLU 156 n 156 GLU 156 A ILE 157 n 157 ILE 157 A VAL 158 n 158 VAL 158 A PHE 159 n 159 PHE 159 A GLN 160 n 160 GLN 160 A ASN 161 n 161 ASN 161 A ALA 162 n 162 ALA 162 A ALA 163 n 163 ALA 163 A PHE 164 n 164 PHE 164 A THR 165 n 165 THR 165 A MET 166 n 166 MET 166 A TRP 167 n 167 TRP 167 A LYS 168 n 168 LYS 168 A LEU 169 n 169 LEU 169 A THR 170 n 170 THR 170 A TYR 171 n 171 TYR 171 A LEU 172 n 172 LEU 172 A GLU 173 n 173 GLU 173 A HIS 174 n 174 HIS 174 A GLN 175 n 175 GLN 175 A LEU 176 n 176 LEU 176 A MET 177 n 177 MET 177 A PRO 178 n 178 PRO 178 A ILE 179 n 179 ILE 179 A LEU 180 n 180 LEU 180 A ASP 181 n 181 ASP 181 A GLN 182 n 182 GLN 182 A ASN 183 n 183 ASN 183 A PHE 184 n 184 PHE 184 A ILE 185 n 185 ILE 185 A GLU 186 n 186 GLU 186 A TYR 187 n 187 TYR 187 A LYS 188 n 188 LYS 188 A VAL 189 n 189 VAL 189 A THR 190 n 190 THR 190 A LEU 191 n 191 LEU 191 A ASN 192 n 192 ASN 192 A GLU 193 n 193 GLU 193 A ASP 194 n 194 ASP 194 A LYS 195 n 195 LYS 195 A PRO 196 n 196 PRO 196 A ILE 197 n 197 ILE 197 A SER 198 n 198 SER 198 A ASP 199 n 199 ASP 199 A VAL 200 n 200 VAL 200 A HIS 201 n 201 HIS 201 A VAL 202 n 202 VAL 202 A LYS 203 n 203 LYS 203 A GLU 204 n 204 GLU 204 A LEU 205 n 205 LEU 205 A VAL 206 n 206 VAL 206 A ALA 207 n 207 ALA 207 A GLU 208 n 208 GLU 208 A LEU 209 n 209 LEU 209 A ARG 210 n 210 ARG 210 A TRP 211 n 211 TRP 211 A GLN 212 n 212 GLN 212 A TYR 213 n 213 TYR 213 A ASN 214 n 214 ASN 214 A LYS 215 n 215 LYS 215 A PHE 216 n 216 PHE 216 A ALA 217 n 217 ALA 217 A VAL 218 n 218 VAL 218 A ILE 219 n 219 ILE 219 A THR 220 n 220 THR 220 A HIS 221 n 221 HIS 221 A GLY 222 n 222 GLY 222 A LYS 223 n 223 LYS 223 A GLY 224 n 224 GLY 224 A HIP 225 n 225 PSH 225 A TYR 226 n 226 TYR 226 A ARG 227 n 227 ARG 227 A ILE 228 n 228 ILE 228 A VAL 229 n 229 VAL 229 A LYS 230 n 230 LYS 230 A TYR 231 n 231 TYR 231 A SER 232 n 232 SER 232 A SER 233 n 233 SER 233 A VAL 234 n 234 VAL 234 A ALA 235 n 235 ALA 235 A ASN 236 n 236 ASN 236 A HIS 237 n 237 HIS 237 A ALA 238 n 238 ALA 238 A ASP 239 n 239 ASP 239 A ARG 240 n 240 ARG 240 A VAL 241 n 241 VAL 241 A TYR 242 n 242 TYR 242 A ALA 243 n 243 ALA 243 A THR 244 n 244 THR 244 A PHE 245 n 245 PHE 245 A LYS 246 n 246 LYS 246 A SER 247 n 247 SER 247 A ASN 248 n 248 ASN 248 A VAL 249 n 249 VAL 249 A LYS 250 n 250 LYS 250 A n 251 251 A n 252 252 A n 253 253 A n 254 254 A ASN 255 n 255 ASN 255 A ASP 256 n 256 ASP 256 A PHE 257 n 257 PHE 257 A ASN 258 n 258 ASN 258 A LEU 259 n 259 LEU 259 A LEU 260 n 260 LEU 260 A ASP 261 n 261 ASP 261 A GLN 262 n 262 GLN 262 A ARG 263 n 263 ARG 263 A ILE 264 n 264 ILE 264 A ILE 265 n 265 ILE 265 A TRP 266 n 266 TRP 266 A GLN 267 n 267 GLN 267 A ASN 268 n 268 ASN 268 A TRP 269 n 269 TRP 269 A TYR 270 n 270 TYR 270 A ALA 271 n 271 ALA 271 A PHE 272 n 272 PHE 272 A THR 273 n 273 THR 273 A SER 274 n 274 SER 274 A SER 275 n 275 SER 275 A MET 276 n 276 MET 276 A LYS 277 n 277 LYS 277 A GLN 278 n 278 GLN 278 A GLY 279 n 279 GLY 279 A ASN 280 n 280 ASN 280 A THR 281 n 281 THR 281 A LEU 282 n 282 LEU 282 A ASP 283 n 283 ASP 283 A VAL 284 n 284 VAL 284 A CYS 285 n 285 CYS 285 A LYS 286 n 286 LYS 286 A ARG 287 n 287 ARG 287 A LEU 288 n 288 LEU 288 A LEU 289 n 289 LEU 289 A PHE 290 n 290 PHE 290 A GLN 291 n 291 GLN 291 A LYS 292 n 292 LYS 292 A MET 293 n 293 MET 293 A LYS 294 n 294 LYS 294 A PRO 295 n 295 PRO 295 A GLU 296 n 296 GLU 296 A LYS 297 n 297 LYS 297 A ASN 298 n 298 ASN 298 A PRO 299 n 299 PRO 299 A PHE 300 n 300 PHE 300 A LYS 301 n 301 LYS 301 A GLY 302 n 302 GLY 302 A LEU 303 n 303 LEU 303 A SER 304 n 304 SER 304 A THR 305 n 305 THR 305 A ASP 306 n 306 ASP 306 A ARG 307 n 307 ARG 307 A LYS 308 n 308 LYS 308 A MET 309 n 309 MET 309 A ASP 310 n 310 ASP 310 A GLU 311 n 311 GLU 311 A VAL 312 n 312 VAL 312 A SER 313 n 313 SER 313 A n 314 314 A n 315 315 A n 316 316 A n 317 317 A author_and_software_defined_assembly PISA 8 octameric 20530 A PSH 225 1-THIOPHOSPHONO-L-HISTIDINE A PSH 225 HIS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_465 -x-1,-y+1,z crystal symmetry operation -108.1750000000 108.1750000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_565 -y,x+1,z crystal symmetry operation 0.0000000000 108.1750000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 4_455 y-1,-x,z crystal symmetry operation -108.1750000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_455 -x-1,y,-z crystal symmetry operation -108.1750000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_565 x,-y+1,-z crystal symmetry operation 0.0000000000 108.1750000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_465 y-1,x+1,-z crystal symmetry operation -108.1750000000 108.1750000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_555 -y,-x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N HIS 11 A N HIS 11 A O LYS 18 A O LYS 18 A N TYR 44 A N TYR 44 A O ALA 52 A O ALA 52 A N PHE 159 A N PHE 159 A O MET 166 A O MET 166 A N LEU 169 A N LEU 169 A O GLU 186 A O GLU 186 A N TYR 187 A N TYR 187 A O ILE 228 A O ILE 228 A O VAL 229 A O VAL 229 A N ALA 217 A N ALA 217 1 A MET 1 A MET 1 1 Y 1 A THR 251 A THR 251 1 Y 1 A GLY 252 A GLY 252 1 Y 1 A VAL 253 A VAL 253 1 Y 1 A ASN 254 A ASN 254 1 Y 1 A GLN 314 A GLN 314 1 Y 1 A VAL 315 A VAL 315 1 Y 1 A GLY 316 A GLY 316 1 Y 1 A VAL 317 A VAL 317 1 Y 1 A ASN 14 45.75 91.27 1 A ASP 15 37.82 69.22 1 A SER 16 155.85 152.06 1 A ILE 47 68.87 -48.54 1 A GLU 73 -94.68 33.75 1 A LYS 92 56.40 79.99 1 A PHE 159 -175.11 132.69 1 A THR 170 -92.07 34.88 1 A TYR 171 -49.31 -17.01 1 A HIS 174 -49.22 150.40 1 A MET 177 -153.99 70.60 1 A TYR 213 -142.36 39.93 1 A LEU 260 59.70 172.62 1 A ASN 280 -39.34 160.69 1 A PRO 295 -48.80 100.36 41.8433 0.2777 0.2255 2.7 44.06 833 12746 11690 91.7 RANDOM 1 Isotropic THROUGHOUT 1.0 1.0 MOLECULAR REPLACEMENT PDB ENTRY 1l9v Engh & Huber 2.7 44.06 15 2535 5 0 2515 0.011187 1.33635 80.03688 2.7 50 2R7C 12746 12530 3 3 0.057 1 18.6 7.8 0.393 2.7 2.8 14.3 1226 7.8 98.8 data collection HKL-3000 phasing AMoRE refinement CNS 1.1 data reduction HKL-3000 data scaling HKL-3000 Crystallographic and biochemical analysis of rotavirus NSP2 with nucleotides reveals an NDP kinase like activity 1 N N 2 N N 3 N N A GLU 3 A GLU 3 HELX_P A CYS 6 A CYS 6 5 1 4 A ASN 23 A ASN 23 HELX_P A THR 32 A THR 32 1 2 10 A PRO 54 A PRO 54 HELX_P A TYR 61 A TYR 61 5 3 8 A THR 74 A THR 74 HELX_P A SER 90 A SER 90 1 4 17 A ASN 97 A ASN 97 HELX_P A SER 103 A SER 103 1 5 7 A SER 107 A SER 107 HELX_P A GLU 119 A GLU 119 1 6 13 A ASP 123 A ASP 123 HELX_P A HIS 127 A HIS 127 5 7 5 A SER 128 A SER 128 HELX_P A ILE 140 A ILE 140 1 8 13 A THR 148 A THR 148 HELX_P A ALA 152 A ALA 152 5 9 5 A SER 198 A SER 198 HELX_P A TYR 213 A TYR 213 1 10 16 A SER 233 A SER 233 HELX_P A SER 247 A SER 247 1 11 15 A TRP 266 A TRP 266 HELX_P A GLN 278 A GLN 278 1 12 13 A THR 281 A THR 281 HELX_P A LEU 288 A LEU 288 1 13 8 A GLY 302 A GLY 302 HELX_P A SER 313 A SER 313 1 14 12 covale 1.332 both A GLY 224 A C GLY 224 1_555 A PSH 225 A N PSH 225 1_555 covale 1.324 both A PSH 225 A C PSH 225 1_555 A TYR 226 A N TYR 226 1_555 RNA BINDING PROTEIN Rotavirus, NDP Kinase, non structural protein, NTPase, RNA binding protein, RNA-binding VN35_ROTSR UNP 1 1 Q03243 MAELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMNFETIMFTKV AMLICEALNSLKVTQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVFQ NAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHGKGHYRIVKYSSVANHADR VYATFKSNVKTGVNNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCKRLLFQKMKPEKNPFKGLSTDRKMDEVSQVGV 1 317 2R7C 1 317 Q03243 A 1 1 317 2 2 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A CYS 8 A CYS 8 A LEU 12 A LEU 12 A TYR 17 A TYR 17 A PRO 21 A PRO 21 A TYR 44 A TYR 44 A ASP 45 A ASP 45 A ILE 51 A ILE 51 A ALA 52 A ALA 52 A GLU 156 A GLU 156 A GLN 160 A GLN 160 A PHE 164 A PHE 164 A LEU 169 A LEU 169 A GLU 186 A GLU 186 A LEU 191 A LEU 191 A TYR 226 A TYR 226 A LYS 230 A LYS 230 A PHE 216 A PHE 216 A THR 220 A THR 220 97 I 4 2 2