0.015195 0.000000 0.000000 0.000000 0.012404 0.000000 0.000000 0.000000 0.005959 0.00000 0.00000 0.00000 Chen, Y.Q. Ghosh, S. Ghosh, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 65.810 80.620 167.800 C9 H12 I N2 O8 P 434.078 n 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C4 H10 O2 S2 154.251 (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N O N 8 N O N 9 N I N 10 R C N 11 N C N 12 S C N 13 R C N 14 N O N 15 N O N 16 N C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N N N 35 S C N 36 N C N 37 N O N 38 N C N 39 N O N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N N N 48 S C N 49 N C N 50 N O N 51 N C N 52 N C N 53 N C N 54 N N N 55 N C N 56 N N N 57 N N N 58 N O N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N O N 81 N N N 82 N O N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N O N 98 N O N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 R C N 109 N C N 110 N O N 111 N C N 112 N S N 113 N O N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N O N 122 N P N 123 N O N 124 N O N 125 N O N 126 N C N 127 R C N 128 N O N 129 S C N 130 N O N 131 N C N 132 R C Y 133 N N Y 134 N C Y 135 N N Y 136 N C Y 137 N C N 138 N N Y 139 N N Y 140 N C Y 141 N N Y 142 N C N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N O N 158 N P N 159 N O N 160 N O N 161 N O N 162 N C N 163 R C N 164 N O N 165 S C N 166 N O N 167 N C N 168 R C N 169 N N N 170 N C N 171 N O N 172 N N N 173 N C N 174 N N N 175 N C N 176 N C N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N O N 192 N P N 193 N O N 194 N O N 195 N O N 196 N C N 197 R C N 198 N O N 199 S C N 200 N O N 201 N C N 202 R C Y 203 N N Y 204 N C Y 205 N N Y 206 N C N 207 N C N 208 N O N 209 N N N 210 N C N 211 N N N 212 N N Y 213 N C N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N O N 229 N P N 230 N O N 231 N O N 232 N O N 233 N C N 234 R C N 235 N O N 236 S C N 237 N O N 238 N C N 239 R C N 240 N N N 241 N C N 242 N O N 243 N N N 244 N C N 245 N O N 246 N C N 247 N C N 248 N C N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N S N 265 N C N 266 S C N 267 N O N 268 S C N 269 N O N 270 N C N 271 N S N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C N 287 N C N 288 N C N 289 N O N 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 N C N 307 N C N 308 N C N 309 N O N 310 N O N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 N C N 323 N C N 324 N O N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C Y 336 N C Y 337 N N Y 338 N C Y 339 N C Y 340 N N N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N O N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 S C N 360 N C N 361 N C N 362 N C N 363 N O N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N C N 383 N C N 384 N C N 385 N O N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C N 404 N C N 405 N C N 406 N C N 407 N N N 408 N O N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N N N 425 S C N 426 N C N 427 N O N 428 N C N 429 N C N 430 N S N 431 N C N 432 N O N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N N N 445 S C N 446 N C N 447 N O N 448 N C Y 449 N C Y 450 N C Y 451 N C Y 452 N C Y 453 N C Y 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N N N 468 S C N 469 N C N 470 N O N 471 N C N 472 N C N 473 N C N 474 N O N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N N N 485 S C N 486 N C N 487 N O N 488 N C N 489 N O N 490 N O N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N N N 499 S C N 500 N C N 501 N O N 502 R C N 503 N O N 504 N C N 505 N O N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N N N 516 S C N 517 N C N 518 N O N 519 N C Y 520 N C Y 521 N C Y 522 N C Y 523 N N Y 524 N C Y 525 N C Y 526 N C Y 527 N C Y 528 N C N 529 N O N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N N N 543 S C N 544 N C N 545 N O N 546 N C Y 547 N C Y 548 N C Y 549 N C Y 550 N C Y 551 N C Y 552 N C N 553 N O N 554 N O N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N N N 567 S C N 568 N C N 569 N O N 570 N C N 571 N C N 572 N C N 573 N O N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N doub N 10 N doub N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N sing Y 142 N doub N 143 N sing Y 144 N sing Y 145 N sing Y 146 N doub N 147 N sing Y 148 N doub N 149 N sing N 150 N sing Y 151 N sing Y 152 N doub N 153 N sing Y 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing Y 213 N sing Y 214 N sing Y 215 N doub N 216 N sing Y 217 N sing N 218 N sing Y 219 N doub N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing Y 340 N sing Y 341 N doub Y 342 N doub N 343 N sing Y 344 N sing N 345 N sing Y 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing Y 448 N doub Y 449 N sing Y 450 N sing N 451 N sing Y 452 N doub N 453 N sing Y 454 N doub N 455 N sing Y 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N doub N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N doub N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N doub N 513 N sing N 514 N sing N 515 N sing N 516 N sing Y 517 N doub Y 518 N sing Y 519 N sing N 520 N sing Y 521 N doub Y 522 N sing Y 523 N sing N 524 N sing Y 525 N sing Y 526 N doub N 527 N sing Y 528 N doub N 529 N sing Y 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N doub N 541 N sing N 542 N sing N 543 N sing N 544 N sing Y 545 N doub Y 546 N sing Y 547 N sing N 548 N sing Y 549 N doub N 550 N sing Y 551 N doub N 552 N sing Y 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N doub N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 5 67 73 10.1038/nsb0198-67 9437432 A novel DNA recognition mode by the NF-kappa B p65 homodimer. 1998 10.2210/pdb2ram/pdb pdb_00002ram 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 105 1 IMAGE PLATE 1996-11 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 6358.706 DNA (5'-D(*CP*GP*GP*CP*TP*GP*GP*AP*AP*AP*TP*(5IU)P*(5IU)P*CP*CP*AP*GP*CP*CP*G)-3') 2 syn polymer 31010.080 PROTEIN (TRANSCRIPTION FACTOR NF-KB P65) P65 RESIDUES 19 - 291 2 man polymer 154.251 (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL 2 syn non-polymer 18.015 water 128 nat water RELA no yes (DC)(DG)(DG)(DC)(DT)(DG)(DG)(DA)(DA)(DA)(DT)(5IU)(5IU)(DC)(DC)(DA)(DG)(DC)(DC) (DG) CGGCTGGAAATUUCCAGCCG C,D polydeoxyribonucleotide no no PYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDG YYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPV LSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYA DPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD PYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDG YYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPV LSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYA DPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia sample 10090 Mus musculus 562 Escherichia coli 1 2.97 58.63 7.5 pH 7.5 3.728 1 C 1 D 20 44.305 C_DC1:DG20_D 1 -10.924 2.302 0.509 1.268 32.349 1 19 C 2 D 19 -1.384 C_DG2:DC19_D 2 -13.893 1.021 1.543 -0.552 14.141 1 19 C 3 D 18 -14.457 C_DG3:DC18_D 3 -25.157 0.367 1.198 -0.783 -8.289 1 C 4 D 17 12.224 C_DC4:DG17_D 4 -20.564 -1.498 0.289 0.183 12.675 1 20 C 5 D 16 -0.370 C_DT5:DA16_D 5 -17.661 0.492 -0.177 -0.088 25.991 1 19 C 6 D 15 3.572 C_DG6:DC15_D 6 -10.208 0.937 1.227 -0.364 16.273 1 19 C 7 D 14 -3.769 C_DG7:DC14_D 7 -17.345 0.393 0.620 -0.426 4.767 1 20 C 8 D 13 7.507 C_DA8:5IU13_D 8 -19.222 -0.017 -0.015 0.092 11.689 1 20 C 9 D 12 3.378 C_DA9:5IU12_D 9 -17.157 -0.062 0.852 -0.115 8.092 1 20 C 10 D 11 4.479 C_DA10:DT11_D 10 -19.991 -0.177 0.081 0.178 -1.061 1 20 C 11 D 10 6.403 C_DT11:DA10_D 11 -26.044 0.423 0.207 0.017 -3.241 1 20 C 12 D 9 6.369 C_5IU12:DA9_D 12 -18.921 -0.049 0.290 -0.052 -8.035 1 20 C 13 D 8 8.399 C_5IU13:DA8_D 13 -20.240 -0.396 -0.431 -0.096 0.674 1 19 C 14 D 7 7.139 C_DC14:DG7_D 14 -13.608 0.366 0.176 0.160 5.413 1 19 C 15 D 6 -1.261 C_DC15:DG6_D 15 -5.896 0.021 -0.058 -0.310 28.539 C 16 D 5 4.706 C_DA16:DT5_D 16 -20.646 0.151 1.134 0.175 14.665 1 19 C 17 D 4 -11.538 C_DG17:DC4_D 17 -29.635 1.586 1.216 -0.477 -6.493 1 19 C 18 D 3 -2.859 C_DC18:DG3_D 18 -21.679 -0.346 0.477 -0.375 -10.266 1 19 C 19 D 2 6.761 C_DC19:DG2_D 19 -7.949 -1.363 0.787 -0.211 25.385 1 19 C 20 D 1 3.290 C_DG20:DC1_D 20 17.536 -0.004 0.946 0.210 3.107 42.544 C C 1 2 -2.197 D D 20 19 2.727 -1.550 -1.684 1.783 CC_DC1DG2:DC19DG20_DD 1 -17.562 24.890 38.875 2.604 0.657 3.771 38.843 C C 2 3 -8.818 D D 19 18 3.673 -5.840 -0.811 -0.662 CC_DG2DG3:DC18DC19_DD 2 -2.315 3.496 38.351 -0.181 0.896 3.782 30.196 C C 3 4 -3.615 D D 18 17 3.807 -1.857 0.421 -0.260 CC_DG3DC4:DG17DC18_DD 3 8.583 -16.707 28.919 -0.052 1.261 2.870 38.328 C C 4 5 2.576 D D 17 16 2.890 1.688 -0.317 0.604 CC_DC4DT5:DA16DG17_DD 4 3.723 -5.681 38.117 0.733 0.894 2.723 49.614 C C 5 6 -8.412 D D 16 15 3.087 -6.981 0.236 1.582 CC_DT5DG6:DC15DA16_DD 5 -11.523 13.885 47.862 2.352 -1.050 3.419 34.116 C C 6 7 -11.533 D D 15 14 3.535 -6.699 -0.291 -0.169 CC_DG6DG7:DC14DC15_DD 6 5.213 -8.974 33.074 0.860 1.390 3.600 36.581 C C 7 8 2.497 D D 14 13 3.591 1.562 0.511 -0.574 CC_DG7DA8:5IU13DC14_DD 7 5.121 -8.186 36.200 -1.151 -0.036 2.979 33.533 C C 8 9 -13.260 D D 13 12 2.936 -7.566 0.118 -0.710 CC_DA8DA9:5IU125IU13_DD 8 -4.471 7.837 32.393 -0.086 -0.881 3.400 35.962 C C 9 10 -3.185 D D 12 11 3.380 -1.963 -0.080 -0.861 CC_DA9DA10:DT115IU12_DD 9 3.265 -5.298 35.766 -1.104 0.613 3.190 36.996 C C 10 11 10.673 D D 11 10 3.334 6.731 -0.154 -0.533 CC_DA10DT11:DA10DT11_DD 10 -2.775 4.400 36.297 -1.753 -0.134 3.298 33.388 C C 11 12 -1.950 D D 10 9 3.275 -1.120 -0.276 -0.533 CC_DT115IU12:DA9DA10_DD 11 -1.213 2.112 33.348 -0.742 0.278 3.227 37.387 C C 12 13 -4.072 D D 9 8 3.221 -2.599 0.137 -0.387 CC_5IU125IU13:DA8DA9_DD 12 5.420 -8.489 36.918 -0.265 0.495 3.221 33.979 C C 13 14 2.602 D D 8 7 3.257 1.516 0.009 -0.142 CC_5IU13DC14:DG7DA8_DD 13 -4.453 7.643 33.661 -0.483 -0.724 3.391 30.699 C C 14 15 -1.600 D D 7 6 3.392 -0.847 -0.007 -0.216 CC_DC14DC15:DG6DG7_DD 14 1.616 -3.054 30.646 -0.236 0.343 2.986 37.880 C C 15 16 -0.197 D D 6 5 2.930 -0.126 -0.605 0.883 CC_DC15DA16:DT5DG6_DD 15 -9.641 15.006 36.675 1.375 -0.205 3.561 45.116 C C 16 17 0.800 D D 5 4 3.532 0.613 -0.535 -0.196 CC_DA16DG17:DC4DT5_DD 16 -3.940 5.142 44.948 -0.315 0.314 3.364 26.057 C C 17 18 4.816 D D 4 3 3.579 2.165 -0.518 -1.634 CC_DG17DC18:DG3DC4_DD 17 2.662 -5.921 25.834 -4.256 1.924 3.147 25.046 C C 18 19 7.413 D D 3 2 3.326 3.200 0.395 -0.749 CC_DC18DC19:DG2DG3_DD 18 -2.620 6.068 24.708 -2.671 -1.684 2.293 37.570 C C 19 20 -10.993 D D 2 1 2.631 -7.025 0.375 1.295 CC_DC19DG20:DC1DG2_DD 19 -4.460 6.979 36.669 2.708 -1.025 chem_comp_atom chem_comp_bond database_2 struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1998-05-27 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1997-11-23 REL REL DTV (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL HOH water DTT 501 3 DTV DTV 501 A DTT 502 3 DTV DTV 502 B HOH 306 4 HOH HOH 306 C HOH 316 4 HOH HOH 316 C HOH 325 4 HOH HOH 325 C HOH 328 4 HOH HOH 328 C HOH 333 4 HOH HOH 333 C HOH 353 4 HOH HOH 353 C HOH 360 4 HOH HOH 360 C HOH 384 4 HOH HOH 384 C HOH 397 4 HOH HOH 397 C HOH 404 4 HOH HOH 404 C HOH 317 4 HOH HOH 317 D HOH 320 4 HOH HOH 320 D HOH 329 4 HOH HOH 329 D HOH 335 4 HOH HOH 335 D HOH 336 4 HOH HOH 336 D HOH 341 4 HOH HOH 341 D HOH 368 4 HOH HOH 368 D HOH 371 4 HOH HOH 371 D HOH 372 4 HOH HOH 372 D HOH 375 4 HOH HOH 375 D HOH 380 4 HOH HOH 380 D HOH 393 4 HOH HOH 393 D HOH 401 4 HOH HOH 401 D HOH 403 4 HOH HOH 403 D HOH 414 4 HOH HOH 414 D HOH 302 4 HOH HOH 302 A HOH 303 4 HOH HOH 303 A HOH 305 4 HOH HOH 305 A HOH 308 4 HOH HOH 308 A HOH 309 4 HOH HOH 309 A HOH 310 4 HOH HOH 310 A HOH 311 4 HOH HOH 311 A HOH 313 4 HOH HOH 313 A HOH 314 4 HOH HOH 314 A HOH 318 4 HOH HOH 318 A HOH 319 4 HOH HOH 319 A HOH 321 4 HOH HOH 321 A HOH 322 4 HOH HOH 322 A HOH 323 4 HOH HOH 323 A HOH 324 4 HOH HOH 324 A HOH 326 4 HOH HOH 326 A HOH 330 4 HOH HOH 330 A HOH 331 4 HOH HOH 331 A HOH 332 4 HOH HOH 332 A HOH 338 4 HOH HOH 338 A HOH 344 4 HOH HOH 344 A HOH 348 4 HOH HOH 348 A HOH 349 4 HOH HOH 349 A HOH 356 4 HOH HOH 356 A HOH 357 4 HOH HOH 357 A HOH 361 4 HOH HOH 361 A HOH 364 4 HOH HOH 364 A HOH 366 4 HOH HOH 366 A HOH 367 4 HOH HOH 367 A HOH 370 4 HOH HOH 370 A HOH 373 4 HOH HOH 373 A HOH 377 4 HOH HOH 377 A HOH 378 4 HOH HOH 378 A HOH 381 4 HOH HOH 381 A HOH 382 4 HOH HOH 382 A HOH 383 4 HOH HOH 383 A HOH 385 4 HOH HOH 385 A HOH 386 4 HOH HOH 386 A HOH 387 4 HOH HOH 387 A HOH 389 4 HOH HOH 389 A HOH 390 4 HOH HOH 390 A HOH 392 4 HOH HOH 392 A HOH 394 4 HOH HOH 394 A HOH 398 4 HOH HOH 398 A HOH 400 4 HOH HOH 400 A HOH 405 4 HOH HOH 405 A HOH 409 4 HOH HOH 409 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 426 4 HOH HOH 426 A HOH 427 4 HOH HOH 427 A HOH 301 4 HOH HOH 301 B HOH 304 4 HOH HOH 304 B HOH 307 4 HOH HOH 307 B HOH 312 4 HOH HOH 312 B HOH 327 4 HOH HOH 327 B HOH 334 4 HOH HOH 334 B HOH 337 4 HOH HOH 337 B HOH 339 4 HOH HOH 339 B HOH 340 4 HOH HOH 340 B HOH 342 4 HOH HOH 342 B HOH 343 4 HOH HOH 343 B HOH 345 4 HOH HOH 345 B HOH 346 4 HOH HOH 346 B HOH 347 4 HOH HOH 347 B HOH 350 4 HOH HOH 350 B HOH 351 4 HOH HOH 351 B HOH 352 4 HOH HOH 352 B HOH 354 4 HOH HOH 354 B HOH 355 4 HOH HOH 355 B HOH 358 4 HOH HOH 358 B HOH 359 4 HOH HOH 359 B HOH 362 4 HOH HOH 362 B HOH 363 4 HOH HOH 363 B HOH 365 4 HOH HOH 365 B HOH 369 4 HOH HOH 369 B HOH 374 4 HOH HOH 374 B HOH 376 4 HOH HOH 376 B HOH 379 4 HOH HOH 379 B HOH 388 4 HOH HOH 388 B HOH 391 4 HOH HOH 391 B HOH 395 4 HOH HOH 395 B HOH 396 4 HOH HOH 396 B HOH 399 4 HOH HOH 399 B HOH 402 4 HOH HOH 402 B HOH 406 4 HOH HOH 406 B HOH 407 4 HOH HOH 407 B HOH 408 4 HOH HOH 408 B HOH 410 4 HOH HOH 410 B HOH 411 4 HOH HOH 411 B HOH 412 4 HOH HOH 412 B HOH 413 4 HOH HOH 413 B HOH 415 4 HOH HOH 415 B HOH 425 4 HOH HOH 425 B HOH 428 4 HOH HOH 428 B HOH 429 4 HOH HOH 429 B C 1 n 1 DC 1 C G 2 n 2 DG 2 C G 3 n 3 DG 3 C C 4 n 4 DC 4 C T 5 n 5 DT 5 C G 6 n 6 DG 6 C G 7 n 7 DG 7 C A 8 n 8 DA 8 C A 9 n 9 DA 9 C A 10 n 10 DA 10 C T 11 n 11 DT 11 C +U 12 n 12 5IU 12 C +U 13 n 13 5IU 13 C C 14 n 14 DC 14 C C 15 n 15 DC 15 C A 16 n 16 DA 16 C G 17 n 17 DG 17 C C 18 n 18 DC 18 C C 19 n 19 DC 19 C G 20 n 20 DG 20 C C 1 n 1 DC 1 D G 2 n 2 DG 2 D G 3 n 3 DG 3 D C 4 n 4 DC 4 D T 5 n 5 DT 5 D G 6 n 6 DG 6 D G 7 n 7 DG 7 D A 8 n 8 DA 8 D A 9 n 9 DA 9 D A 10 n 10 DA 10 D T 11 n 11 DT 11 D +U 12 n 12 5IU 12 D +U 13 n 13 5IU 13 D C 14 n 14 DC 14 D C 15 n 15 DC 15 D A 16 n 16 DA 16 D G 17 n 17 DG 17 D C 18 n 18 DC 18 D C 19 n 19 DC 19 D G 20 n 20 DG 20 D PRO 19 n 1 PRO 19 A TYR 20 n 2 TYR 20 A VAL 21 n 3 VAL 21 A GLU 22 n 4 GLU 22 A ILE 23 n 5 ILE 23 A ILE 24 n 6 ILE 24 A GLU 25 n 7 GLU 25 A GLN 26 n 8 GLN 26 A PRO 27 n 9 PRO 27 A LYS 28 n 10 LYS 28 A GLN 29 n 11 GLN 29 A ARG 30 n 12 ARG 30 A GLY 31 n 13 GLY 31 A MET 32 n 14 MET 32 A ARG 33 n 15 ARG 33 A PHE 34 n 16 PHE 34 A ARG 35 n 17 ARG 35 A TYR 36 n 18 TYR 36 A LYS 37 n 19 LYS 37 A CYS 38 n 20 CYS 38 A GLU 39 n 21 GLU 39 A GLY 40 n 22 GLY 40 A ARG 41 n 23 ARG 41 A SER 42 n 24 SER 42 A ALA 43 n 25 ALA 43 A GLY 44 n 26 GLY 44 A SER 45 n 27 SER 45 A ILE 46 n 28 ILE 46 A PRO 47 n 29 PRO 47 A GLY 48 n 30 GLY 48 A GLU 49 n 31 GLU 49 A ARG 50 n 32 ARG 50 A SER 51 n 33 SER 51 A THR 52 n 34 THR 52 A ASP 53 n 35 ASP 53 A THR 54 n 36 THR 54 A THR 55 n 37 THR 55 A LYS 56 n 38 LYS 56 A THR 57 n 39 THR 57 A HIS 58 n 40 HIS 58 A PRO 59 n 41 PRO 59 A THR 60 n 42 THR 60 A ILE 61 n 43 ILE 61 A LYS 62 n 44 LYS 62 A ILE 63 n 45 ILE 63 A ASN 64 n 46 ASN 64 A GLY 65 n 47 GLY 65 A TYR 66 n 48 TYR 66 A THR 67 n 49 THR 67 A GLY 68 n 50 GLY 68 A PRO 69 n 51 PRO 69 A GLY 70 n 52 GLY 70 A THR 71 n 53 THR 71 A VAL 72 n 54 VAL 72 A ARG 73 n 55 ARG 73 A ILE 74 n 56 ILE 74 A SER 75 n 57 SER 75 A LEU 76 n 58 LEU 76 A VAL 77 n 59 VAL 77 A THR 78 n 60 THR 78 A LYS 79 n 61 LYS 79 A ASP 80 n 62 ASP 80 A PRO 81 n 63 PRO 81 A PRO 82 n 64 PRO 82 A HIS 83 n 65 HIS 83 A ARG 84 n 66 ARG 84 A PRO 85 n 67 PRO 85 A HIS 86 n 68 HIS 86 A PRO 87 n 69 PRO 87 A HIS 88 n 70 HIS 88 A GLU 89 n 71 GLU 89 A LEU 90 n 72 LEU 90 A VAL 91 n 73 VAL 91 A GLY 92 n 74 GLY 92 A LYS 93 n 75 LYS 93 A ASP 94 n 76 ASP 94 A CYS 95 n 77 CYS 95 A ARG 96 n 78 ARG 96 A ASP 97 n 79 ASP 97 A GLY 98 n 80 GLY 98 A TYR 99 n 81 TYR 99 A TYR 100 n 82 TYR 100 A GLU 101 n 83 GLU 101 A ALA 102 n 84 ALA 102 A ASP 103 n 85 ASP 103 A LEU 104 n 86 LEU 104 A CYS 105 n 87 CYS 105 A PRO 106 n 88 PRO 106 A ASP 107 n 89 ASP 107 A ARG 108 n 90 ARG 108 A SER 109 n 91 SER 109 A ILE 110 n 92 ILE 110 A HIS 111 n 93 HIS 111 A SER 112 n 94 SER 112 A PHE 113 n 95 PHE 113 A GLN 114 n 96 GLN 114 A ASN 115 n 97 ASN 115 A LEU 116 n 98 LEU 116 A GLY 117 n 99 GLY 117 A ILE 118 n 100 ILE 118 A GLN 119 n 101 GLN 119 A CYS 120 n 102 CYS 120 A VAL 121 n 103 VAL 121 A LYS 122 n 104 LYS 122 A LYS 123 n 105 LYS 123 A ARG 124 n 106 ARG 124 A ASP 125 n 107 ASP 125 A LEU 126 n 108 LEU 126 A GLU 127 n 109 GLU 127 A GLN 128 n 110 GLN 128 A ALA 129 n 111 ALA 129 A ILE 130 n 112 ILE 130 A SER 131 n 113 SER 131 A GLN 132 n 114 GLN 132 A ARG 133 n 115 ARG 133 A ILE 134 n 116 ILE 134 A GLN 135 n 117 GLN 135 A THR 136 n 118 THR 136 A ASN 137 n 119 ASN 137 A ASN 138 n 120 ASN 138 A ASN 139 n 121 ASN 139 A PRO 140 n 122 PRO 140 A PHE 141 n 123 PHE 141 A HIS 142 n 124 HIS 142 A VAL 143 n 125 VAL 143 A PRO 144 n 126 PRO 144 A ILE 145 n 127 ILE 145 A GLU 146 n 128 GLU 146 A GLU 147 n 129 GLU 147 A GLN 148 n 130 GLN 148 A ARG 149 n 131 ARG 149 A GLY 150 n 132 GLY 150 A ASP 151 n 133 ASP 151 A TYR 152 n 134 TYR 152 A ASP 153 n 135 ASP 153 A LEU 154 n 136 LEU 154 A ASN 155 n 137 ASN 155 A ALA 156 n 138 ALA 156 A VAL 157 n 139 VAL 157 A ARG 158 n 140 ARG 158 A LEU 159 n 141 LEU 159 A CYS 160 n 142 CYS 160 A PHE 161 n 143 PHE 161 A GLN 162 n 144 GLN 162 A VAL 163 n 145 VAL 163 A THR 164 n 146 THR 164 A VAL 165 n 147 VAL 165 A ARG 166 n 148 ARG 166 A ASP 167 n 149 ASP 167 A PRO 168 n 150 PRO 168 A ALA 169 n 151 ALA 169 A GLY 170 n 152 GLY 170 A ARG 171 n 153 ARG 171 A PRO 172 n 154 PRO 172 A LEU 173 n 155 LEU 173 A LEU 174 n 156 LEU 174 A LEU 175 n 157 LEU 175 A THR 176 n 158 THR 176 A PRO 177 n 159 PRO 177 A VAL 178 n 160 VAL 178 A LEU 179 n 161 LEU 179 A SER 180 n 162 SER 180 A HIS 181 n 163 HIS 181 A PRO 182 n 164 PRO 182 A ILE 183 n 165 ILE 183 A PHE 184 n 166 PHE 184 A ASP 185 n 167 ASP 185 A ASN 186 n 168 ASN 186 A ARG 187 n 169 ARG 187 A ALA 188 n 170 ALA 188 A PRO 189 n 171 PRO 189 A ASN 190 n 172 ASN 190 A THR 191 n 173 THR 191 A ALA 192 n 174 ALA 192 A GLU 193 n 175 GLU 193 A LEU 194 n 176 LEU 194 A LYS 195 n 177 LYS 195 A ILE 196 n 178 ILE 196 A CYS 197 n 179 CYS 197 A ARG 198 n 180 ARG 198 A VAL 199 n 181 VAL 199 A ASN 200 n 182 ASN 200 A ARG 201 n 183 ARG 201 A ASN 202 n 184 ASN 202 A SER 203 n 185 SER 203 A GLY 204 n 186 GLY 204 A SER 205 n 187 SER 205 A CYS 206 n 188 CYS 206 A LEU 207 n 189 LEU 207 A GLY 208 n 190 GLY 208 A GLY 209 n 191 GLY 209 A ASP 210 n 192 ASP 210 A GLU 211 n 193 GLU 211 A ILE 212 n 194 ILE 212 A PHE 213 n 195 PHE 213 A LEU 214 n 196 LEU 214 A LEU 215 n 197 LEU 215 A CYS 216 n 198 CYS 216 A ASP 217 n 199 ASP 217 A LYS 218 n 200 LYS 218 A VAL 219 n 201 VAL 219 A GLN 220 n 202 GLN 220 A LYS 221 n 203 LYS 221 A GLU 222 n 204 GLU 222 A ASP 223 n 205 ASP 223 A ILE 224 n 206 ILE 224 A GLU 225 n 207 GLU 225 A VAL 226 n 208 VAL 226 A TYR 227 n 209 TYR 227 A PHE 228 n 210 PHE 228 A THR 229 n 211 THR 229 A GLY 230 n 212 GLY 230 A PRO 231 n 213 PRO 231 A GLY 232 n 214 GLY 232 A TRP 233 n 215 TRP 233 A GLU 234 n 216 GLU 234 A ALA 235 n 217 ALA 235 A ARG 236 n 218 ARG 236 A GLY 237 n 219 GLY 237 A SER 238 n 220 SER 238 A PHE 239 n 221 PHE 239 A SER 240 n 222 SER 240 A GLN 241 n 223 GLN 241 A ALA 242 n 224 ALA 242 A ASP 243 n 225 ASP 243 A VAL 244 n 226 VAL 244 A HIS 245 n 227 HIS 245 A ARG 246 n 228 ARG 246 A GLN 247 n 229 GLN 247 A VAL 248 n 230 VAL 248 A ALA 249 n 231 ALA 249 A ILE 250 n 232 ILE 250 A VAL 251 n 233 VAL 251 A PHE 252 n 234 PHE 252 A ARG 253 n 235 ARG 253 A THR 254 n 236 THR 254 A PRO 255 n 237 PRO 255 A PRO 256 n 238 PRO 256 A TYR 257 n 239 TYR 257 A ALA 258 n 240 ALA 258 A ASP 259 n 241 ASP 259 A PRO 260 n 242 PRO 260 A SER 261 n 243 SER 261 A LEU 262 n 244 LEU 262 A GLN 263 n 245 GLN 263 A ALA 264 n 246 ALA 264 A PRO 265 n 247 PRO 265 A VAL 266 n 248 VAL 266 A ARG 267 n 249 ARG 267 A VAL 268 n 250 VAL 268 A SER 269 n 251 SER 269 A MET 270 n 252 MET 270 A GLN 271 n 253 GLN 271 A LEU 272 n 254 LEU 272 A ARG 273 n 255 ARG 273 A ARG 274 n 256 ARG 274 A PRO 275 n 257 PRO 275 A SER 276 n 258 SER 276 A ASP 277 n 259 ASP 277 A ARG 278 n 260 ARG 278 A GLU 279 n 261 GLU 279 A LEU 280 n 262 LEU 280 A SER 281 n 263 SER 281 A GLU 282 n 264 GLU 282 A PRO 283 n 265 PRO 283 A MET 284 n 266 MET 284 A GLU 285 n 267 GLU 285 A PHE 286 n 268 PHE 286 A GLN 287 n 269 GLN 287 A TYR 288 n 270 TYR 288 A LEU 289 n 271 LEU 289 A PRO 290 n 272 PRO 290 A ASP 291 n 273 ASP 291 A PRO 19 n 1 PRO 19 B TYR 20 n 2 TYR 20 B VAL 21 n 3 VAL 21 B GLU 22 n 4 GLU 22 B ILE 23 n 5 ILE 23 B ILE 24 n 6 ILE 24 B GLU 25 n 7 GLU 25 B GLN 26 n 8 GLN 26 B PRO 27 n 9 PRO 27 B LYS 28 n 10 LYS 28 B GLN 29 n 11 GLN 29 B ARG 30 n 12 ARG 30 B GLY 31 n 13 GLY 31 B MET 32 n 14 MET 32 B ARG 33 n 15 ARG 33 B PHE 34 n 16 PHE 34 B ARG 35 n 17 ARG 35 B TYR 36 n 18 TYR 36 B LYS 37 n 19 LYS 37 B CYS 38 n 20 CYS 38 B GLU 39 n 21 GLU 39 B GLY 40 n 22 GLY 40 B ARG 41 n 23 ARG 41 B SER 42 n 24 SER 42 B ALA 43 n 25 ALA 43 B GLY 44 n 26 GLY 44 B SER 45 n 27 SER 45 B ILE 46 n 28 ILE 46 B PRO 47 n 29 PRO 47 B GLY 48 n 30 GLY 48 B GLU 49 n 31 GLU 49 B ARG 50 n 32 ARG 50 B SER 51 n 33 SER 51 B THR 52 n 34 THR 52 B ASP 53 n 35 ASP 53 B THR 54 n 36 THR 54 B THR 55 n 37 THR 55 B LYS 56 n 38 LYS 56 B THR 57 n 39 THR 57 B HIS 58 n 40 HIS 58 B PRO 59 n 41 PRO 59 B THR 60 n 42 THR 60 B ILE 61 n 43 ILE 61 B LYS 62 n 44 LYS 62 B ILE 63 n 45 ILE 63 B ASN 64 n 46 ASN 64 B GLY 65 n 47 GLY 65 B TYR 66 n 48 TYR 66 B THR 67 n 49 THR 67 B GLY 68 n 50 GLY 68 B PRO 69 n 51 PRO 69 B GLY 70 n 52 GLY 70 B THR 71 n 53 THR 71 B VAL 72 n 54 VAL 72 B ARG 73 n 55 ARG 73 B ILE 74 n 56 ILE 74 B SER 75 n 57 SER 75 B LEU 76 n 58 LEU 76 B VAL 77 n 59 VAL 77 B THR 78 n 60 THR 78 B LYS 79 n 61 LYS 79 B ASP 80 n 62 ASP 80 B PRO 81 n 63 PRO 81 B PRO 82 n 64 PRO 82 B HIS 83 n 65 HIS 83 B ARG 84 n 66 ARG 84 B PRO 85 n 67 PRO 85 B HIS 86 n 68 HIS 86 B PRO 87 n 69 PRO 87 B HIS 88 n 70 HIS 88 B GLU 89 n 71 GLU 89 B LEU 90 n 72 LEU 90 B VAL 91 n 73 VAL 91 B GLY 92 n 74 GLY 92 B LYS 93 n 75 LYS 93 B ASP 94 n 76 ASP 94 B CYS 95 n 77 CYS 95 B ARG 96 n 78 ARG 96 B ASP 97 n 79 ASP 97 B GLY 98 n 80 GLY 98 B TYR 99 n 81 TYR 99 B TYR 100 n 82 TYR 100 B GLU 101 n 83 GLU 101 B ALA 102 n 84 ALA 102 B ASP 103 n 85 ASP 103 B LEU 104 n 86 LEU 104 B CYS 105 n 87 CYS 105 B PRO 106 n 88 PRO 106 B ASP 107 n 89 ASP 107 B ARG 108 n 90 ARG 108 B SER 109 n 91 SER 109 B ILE 110 n 92 ILE 110 B HIS 111 n 93 HIS 111 B SER 112 n 94 SER 112 B PHE 113 n 95 PHE 113 B GLN 114 n 96 GLN 114 B ASN 115 n 97 ASN 115 B LEU 116 n 98 LEU 116 B GLY 117 n 99 GLY 117 B ILE 118 n 100 ILE 118 B GLN 119 n 101 GLN 119 B CYS 120 n 102 CYS 120 B VAL 121 n 103 VAL 121 B LYS 122 n 104 LYS 122 B LYS 123 n 105 LYS 123 B ARG 124 n 106 ARG 124 B ASP 125 n 107 ASP 125 B LEU 126 n 108 LEU 126 B GLU 127 n 109 GLU 127 B GLN 128 n 110 GLN 128 B ALA 129 n 111 ALA 129 B ILE 130 n 112 ILE 130 B SER 131 n 113 SER 131 B GLN 132 n 114 GLN 132 B ARG 133 n 115 ARG 133 B ILE 134 n 116 ILE 134 B GLN 135 n 117 GLN 135 B THR 136 n 118 THR 136 B ASN 137 n 119 ASN 137 B ASN 138 n 120 ASN 138 B ASN 139 n 121 ASN 139 B PRO 140 n 122 PRO 140 B PHE 141 n 123 PHE 141 B HIS 142 n 124 HIS 142 B VAL 143 n 125 VAL 143 B PRO 144 n 126 PRO 144 B ILE 145 n 127 ILE 145 B GLU 146 n 128 GLU 146 B GLU 147 n 129 GLU 147 B GLN 148 n 130 GLN 148 B ARG 149 n 131 ARG 149 B GLY 150 n 132 GLY 150 B ASP 151 n 133 ASP 151 B TYR 152 n 134 TYR 152 B ASP 153 n 135 ASP 153 B LEU 154 n 136 LEU 154 B ASN 155 n 137 ASN 155 B ALA 156 n 138 ALA 156 B VAL 157 n 139 VAL 157 B ARG 158 n 140 ARG 158 B LEU 159 n 141 LEU 159 B CYS 160 n 142 CYS 160 B PHE 161 n 143 PHE 161 B GLN 162 n 144 GLN 162 B VAL 163 n 145 VAL 163 B THR 164 n 146 THR 164 B VAL 165 n 147 VAL 165 B ARG 166 n 148 ARG 166 B ASP 167 n 149 ASP 167 B PRO 168 n 150 PRO 168 B ALA 169 n 151 ALA 169 B GLY 170 n 152 GLY 170 B ARG 171 n 153 ARG 171 B PRO 172 n 154 PRO 172 B LEU 173 n 155 LEU 173 B LEU 174 n 156 LEU 174 B LEU 175 n 157 LEU 175 B THR 176 n 158 THR 176 B PRO 177 n 159 PRO 177 B VAL 178 n 160 VAL 178 B LEU 179 n 161 LEU 179 B SER 180 n 162 SER 180 B HIS 181 n 163 HIS 181 B PRO 182 n 164 PRO 182 B ILE 183 n 165 ILE 183 B PHE 184 n 166 PHE 184 B ASP 185 n 167 ASP 185 B ASN 186 n 168 ASN 186 B ARG 187 n 169 ARG 187 B ALA 188 n 170 ALA 188 B PRO 189 n 171 PRO 189 B ASN 190 n 172 ASN 190 B THR 191 n 173 THR 191 B ALA 192 n 174 ALA 192 B GLU 193 n 175 GLU 193 B LEU 194 n 176 LEU 194 B LYS 195 n 177 LYS 195 B ILE 196 n 178 ILE 196 B CYS 197 n 179 CYS 197 B ARG 198 n 180 ARG 198 B VAL 199 n 181 VAL 199 B ASN 200 n 182 ASN 200 B ARG 201 n 183 ARG 201 B ASN 202 n 184 ASN 202 B SER 203 n 185 SER 203 B GLY 204 n 186 GLY 204 B SER 205 n 187 SER 205 B CYS 206 n 188 CYS 206 B LEU 207 n 189 LEU 207 B GLY 208 n 190 GLY 208 B GLY 209 n 191 GLY 209 B ASP 210 n 192 ASP 210 B GLU 211 n 193 GLU 211 B ILE 212 n 194 ILE 212 B PHE 213 n 195 PHE 213 B LEU 214 n 196 LEU 214 B LEU 215 n 197 LEU 215 B CYS 216 n 198 CYS 216 B ASP 217 n 199 ASP 217 B LYS 218 n 200 LYS 218 B VAL 219 n 201 VAL 219 B GLN 220 n 202 GLN 220 B LYS 221 n 203 LYS 221 B GLU 222 n 204 GLU 222 B ASP 223 n 205 ASP 223 B ILE 224 n 206 ILE 224 B GLU 225 n 207 GLU 225 B VAL 226 n 208 VAL 226 B TYR 227 n 209 TYR 227 B PHE 228 n 210 PHE 228 B THR 229 n 211 THR 229 B GLY 230 n 212 GLY 230 B PRO 231 n 213 PRO 231 B GLY 232 n 214 GLY 232 B TRP 233 n 215 TRP 233 B GLU 234 n 216 GLU 234 B ALA 235 n 217 ALA 235 B ARG 236 n 218 ARG 236 B GLY 237 n 219 GLY 237 B SER 238 n 220 SER 238 B PHE 239 n 221 PHE 239 B SER 240 n 222 SER 240 B GLN 241 n 223 GLN 241 B ALA 242 n 224 ALA 242 B ASP 243 n 225 ASP 243 B VAL 244 n 226 VAL 244 B HIS 245 n 227 HIS 245 B ARG 246 n 228 ARG 246 B GLN 247 n 229 GLN 247 B VAL 248 n 230 VAL 248 B ALA 249 n 231 ALA 249 B ILE 250 n 232 ILE 250 B VAL 251 n 233 VAL 251 B PHE 252 n 234 PHE 252 B ARG 253 n 235 ARG 253 B THR 254 n 236 THR 254 B PRO 255 n 237 PRO 255 B PRO 256 n 238 PRO 256 B TYR 257 n 239 TYR 257 B ALA 258 n 240 ALA 258 B ASP 259 n 241 ASP 259 B PRO 260 n 242 PRO 260 B SER 261 n 243 SER 261 B LEU 262 n 244 LEU 262 B GLN 263 n 245 GLN 263 B ALA 264 n 246 ALA 264 B PRO 265 n 247 PRO 265 B VAL 266 n 248 VAL 266 B ARG 267 n 249 ARG 267 B VAL 268 n 250 VAL 268 B SER 269 n 251 SER 269 B MET 270 n 252 MET 270 B GLN 271 n 253 GLN 271 B LEU 272 n 254 LEU 272 B ARG 273 n 255 ARG 273 B ARG 274 n 256 ARG 274 B PRO 275 n 257 PRO 275 B SER 276 n 258 SER 276 B ASP 277 n 259 ASP 277 B ARG 278 n 260 ARG 278 B GLU 279 n 261 GLU 279 B LEU 280 n 262 LEU 280 B SER 281 n 263 SER 281 B GLU 282 n 264 GLU 282 B PRO 283 n 265 PRO 283 B MET 284 n 266 MET 284 B GLU 285 n 267 GLU 285 B PHE 286 n 268 PHE 286 B GLN 287 n 269 GLN 287 B TYR 288 n 270 TYR 288 B LEU 289 n 271 LEU 289 B PRO 290 n 272 PRO 290 B ASP 291 n 273 ASP 291 B author_defined_assembly 4 tetrameric C 5IU 12 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE A 5IU 12 DU C 5IU 13 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE A 5IU 13 DU D 5IU 12 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE B 5IU 12 DU D 5IU 13 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE B 5IU 13 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O HIS 111 C O HIS 93 A N ILE 61 C N ILE 43 A O THR 60 C O THR 42 A N GLU 25 C N GLU 7 A O TYR 100 C O TYR 82 A N ILE 74 C N ILE 56 A O THR 71 C O THR 53 A N THR 164 C N THR 146 A O VAL 165 C O VAL 147 A N LEU 173 C N LEU 155 A O GLU 89 C O GLU 71 A N GLN 119 C N GLN 101 A O GLY 204 C O GLY 186 A N GLN 287 C N GLN 269 A O MET 284 C O MET 266 A N MET 270 C N MET 252 A O SER 269 C O SER 251 A N THR 229 C N THR 211 A O PHE 228 C O PHE 210 A N ALA 235 C N ALA 217 A O ILE 250 C O ILE 232 A N LEU 214 C N LEU 196 A O LEU 215 C O LEU 197 A N ARG 198 C N ARG 180 B O HIS 111 D O HIS 93 B N ILE 61 D N ILE 43 B O THR 60 D O THR 42 B N GLU 25 D N GLU 7 B O TYR 100 D O TYR 82 B N ILE 74 D N ILE 56 B O THR 71 D O THR 53 B N THR 164 D N THR 146 B O VAL 165 D O VAL 147 B N LEU 173 D N LEU 155 B O GLU 89 D O GLU 71 B N GLN 119 D N GLN 101 B O GLY 204 D O GLY 186 B N GLN 287 D N GLN 269 B O MET 284 D O MET 266 B N MET 270 D N MET 252 B O SER 269 D O SER 251 B N THR 229 D N THR 211 B O PHE 228 D O PHE 210 B N ALA 235 D N ALA 217 B O ILE 250 D O ILE 232 B N LEU 214 D N LEU 196 B O LEU 215 D O LEU 197 B N ARG 198 D N ARG 180 1 D DG 3 0.049 SIDE CHAIN 1 D DC 4 0.080 SIDE CHAIN 1 D DC 14 0.078 SIDE CHAIN 1 D DA 16 0.058 SIDE CHAIN 1 D DC 18 0.074 SIDE CHAIN 1 D DG 20 0.065 SIDE CHAIN 1 3.42 0.50 106.80 110.22 D D D O4' C1' C2' DG DG DG 6 6 6 N 1 2.26 0.30 108.30 110.56 D D D O4' C1' N1 DT DT DT 11 11 11 N 1 2.25 0.30 108.30 110.55 D D D O4' C1' N1 DC DC DC 15 15 15 N 1 10.22 1.50 119.30 129.52 A A A C N CA ASP PRO PRO 80 81 81 Y 1 10.23 1.50 119.30 129.53 B B B C N CA ASP PRO PRO 80 81 81 Y 1 A ALA 43 -92.37 42.27 1 A TYR 66 -177.48 121.32 1 A PRO 81 -6.32 -70.54 1 A HIS 83 -64.61 63.43 1 A ARG 96 169.27 147.94 1 A ASP 97 54.09 18.18 1 A GLU 101 -172.58 137.19 1 A ALA 102 -165.77 -167.43 1 A ASP 125 -87.21 33.07 1 A ASN 137 52.14 77.06 1 A ASN 139 -159.10 74.62 1 A HIS 142 29.31 42.72 1 A VAL 165 -103.30 -165.29 1 A THR 191 -166.52 33.85 1 A ARG 201 -176.44 129.64 1 A ASP 223 -167.55 50.64 1 A TYR 257 -68.78 -177.97 1 B GLU 25 -156.20 87.54 1 B ARG 41 -43.14 -70.01 1 B SER 42 51.85 -75.13 1 B ALA 43 -179.51 134.46 1 B SER 45 -163.96 101.57 1 B GLU 49 -68.94 38.60 1 B ARG 50 173.40 19.83 1 B ASP 53 19.33 -129.93 1 B LYS 56 -99.58 -154.04 1 B THR 57 -173.89 135.46 1 B TYR 66 -177.01 141.06 1 B THR 78 -60.81 -113.46 1 B LYS 79 -177.56 9.44 1 B PRO 81 13.97 -62.83 1 B HIS 83 -59.26 85.96 1 B PRO 85 -64.61 97.11 1 B HIS 88 -61.01 -170.34 1 B ASP 94 65.19 -4.72 1 B GLU 101 -169.15 112.82 1 B LYS 123 -69.55 9.43 1 B ASN 139 177.54 84.04 1 B ARG 187 -69.29 5.65 1 B THR 191 -153.28 -31.06 1 B PRO 231 -42.88 101.13 1 B GLN 247 69.58 -11.36 1 B TYR 257 -68.34 -176.33 1 B SER 261 -146.17 41.85 PARHCSDX.PRO TOPHCSDX.PRO DNA-RNA.PARAM DNA-RNA.TOP PARAM11.WAT TOPH11.WAT 45.1 0.308 0.006 0.213 0.213 2.40 6.00 2752 27086 10.2 81.4 RANDOM 10000000.0 0.001 1 RESTRAINED THROUGHOUT 2.0 0.44 0.32 6.00 0.49 0.44 2.40 6.00 128 5314 20 810 4356 0.010 1.7 25.8 1.62 2.56 1.50 4.08 2.00 3.81 2.00 5.59 2.50 0.385 0.022 0.346 2.54 297 2621 6 10.2 53.0 34.2 2.4 30.0 2RAM 31656 0.053 1 3.3 90.0 refinement X-PLOR 3.843 data reduction DENZO data scaling SCALEPACK A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A LEU 126 C LEU 108 HELX_P A GLN 135 C GLN 117 1 1 10 A GLN 241 C GLN 223 HELX_P A ASP 243 C ASP 225 5 2 3 A PRO 275 C PRO 257 HELX_P A ASP 277 C ASP 259 5 3 3 B LYS 37 D LYS 19 HELX_P B GLU 39 D GLU 21 5 4 3 B LEU 126 D LEU 108 HELX_P B GLN 135 D GLN 117 1 5 10 B LYS 221 D LYS 203 HELX_P B ASP 223 D ASP 205 5 6 3 B GLN 241 D GLN 223 HELX_P B ASP 243 D ASP 225 5 7 3 covale 1.598 both C DT 11 A O3' DT 11 1_555 C 5IU 12 A P 5IU 12 1_555 covale 1.606 both C 5IU 12 A O3' 5IU 12 1_555 C 5IU 13 A P 5IU 13 1_555 covale 1.596 both C 5IU 13 A O3' 5IU 13 1_555 C DC 14 A P DC 14 1_555 covale 1.606 both D DT 11 B O3' DT 11 1_555 D 5IU 12 B P 5IU 12 1_555 covale 1.603 both D 5IU 12 B O3' 5IU 12 1_555 D 5IU 13 B P 5IU 13 1_555 covale 1.588 both D 5IU 13 B O3' 5IU 13 1_555 D DC 14 B P DC 14 1_555 hydrog DC-DC MISPAIR C DC 1 A O2 DC 1 1_555 D DC 19 B N4 DC 19 1_555 hydrog DC-DG PAIR C DC 1 A O2 DC 1 1_555 D DG 20 B N1 DG 20 1_555 hydrog DG-DC PAIR C DG 2 A O6 DG 2 1_555 D DC 18 B N4 DC 18 1_555 hydrog WATSON-CRICK C DG 2 A N1 DG 2 1_555 D DC 19 B N3 DC 19 1_555 hydrog WATSON-CRICK C DG 2 A N2 DG 2 1_555 D DC 19 B O2 DC 19 1_555 hydrog WATSON-CRICK C DG 2 A O6 DG 2 1_555 D DC 19 B N4 DC 19 1_555 hydrog WATSON-CRICK C DG 3 A N1 DG 3 1_555 D DC 18 B N3 DC 18 1_555 hydrog WATSON-CRICK C DG 3 A N2 DG 3 1_555 D DC 18 B O2 DC 18 1_555 hydrog WATSON-CRICK C DG 3 A O6 DG 3 1_555 D DC 18 B N4 DC 18 1_555 hydrog DC-DG PAIR C DC 4 A O2 DC 4 1_555 D DG 17 B N2 DG 17 1_555 hydrog WATSON-CRICK C DT 5 A N3 DT 5 1_555 D DA 16 B N1 DA 16 1_555 hydrog WATSON-CRICK C DT 5 A O4 DT 5 1_555 D DA 16 B N6 DA 16 1_555 hydrog WATSON-CRICK C DG 6 A N1 DG 6 1_555 D DC 15 B N3 DC 15 1_555 hydrog WATSON-CRICK C DG 6 A N2 DG 6 1_555 D DC 15 B O2 DC 15 1_555 hydrog WATSON-CRICK C DG 6 A O6 DG 6 1_555 D DC 15 B N4 DC 15 1_555 hydrog WATSON-CRICK C DG 7 A N1 DG 7 1_555 D DC 14 B N3 DC 14 1_555 hydrog WATSON-CRICK C DG 7 A N2 DG 7 1_555 D DC 14 B O2 DC 14 1_555 hydrog WATSON-CRICK C DG 7 A O6 DG 7 1_555 D DC 14 B N4 DC 14 1_555 hydrog WATSON-CRICK C DA 8 A N1 DA 8 1_555 D 5IU 13 B N3 5IU 13 1_555 hydrog WATSON-CRICK C DA 8 A N6 DA 8 1_555 D 5IU 13 B O4 5IU 13 1_555 hydrog WATSON-CRICK C DA 9 A N1 DA 9 1_555 D 5IU 12 B N3 5IU 12 1_555 hydrog WATSON-CRICK C DA 9 A N6 DA 9 1_555 D 5IU 12 B O4 5IU 12 1_555 hydrog WATSON-CRICK C DA 10 A N1 DA 10 1_555 D DT 11 B N3 DT 11 1_555 hydrog WATSON-CRICK C DA 10 A N6 DA 10 1_555 D DT 11 B O4 DT 11 1_555 hydrog WATSON-CRICK C DT 11 A N3 DT 11 1_555 D DA 10 B N1 DA 10 1_555 hydrog WATSON-CRICK C DT 11 A O4 DT 11 1_555 D DA 10 B N6 DA 10 1_555 hydrog WATSON-CRICK C 5IU 12 A N3 5IU 12 1_555 D DA 9 B N1 DA 9 1_555 hydrog WATSON-CRICK C 5IU 12 A O4 5IU 12 1_555 D DA 9 B N6 DA 9 1_555 hydrog WATSON-CRICK C 5IU 13 A N3 5IU 13 1_555 D DA 8 B N1 DA 8 1_555 hydrog WATSON-CRICK C 5IU 13 A O4 5IU 13 1_555 D DA 8 B N6 DA 8 1_555 hydrog WATSON-CRICK C DC 14 A N3 DC 14 1_555 D DG 7 B N1 DG 7 1_555 hydrog WATSON-CRICK C DC 14 A N4 DC 14 1_555 D DG 7 B O6 DG 7 1_555 hydrog WATSON-CRICK C DC 14 A O2 DC 14 1_555 D DG 7 B N2 DG 7 1_555 hydrog WATSON-CRICK C DC 15 A N3 DC 15 1_555 D DG 6 B N1 DG 6 1_555 hydrog WATSON-CRICK C DC 15 A N4 DC 15 1_555 D DG 6 B O6 DG 6 1_555 hydrog WATSON-CRICK C DC 15 A O2 DC 15 1_555 D DG 6 B N2 DG 6 1_555 hydrog DA-DC MISPAIR C DA 16 A N1 DA 16 1_555 D DC 4 B N4 DC 4 1_555 hydrog DA-DT PAIR C DA 16 A N1 DA 16 1_555 D DT 5 B N3 DT 5 1_555 hydrog WATSON-CRICK C DG 17 A N1 DG 17 1_555 D DC 4 B N3 DC 4 1_555 hydrog WATSON-CRICK C DG 17 A N2 DG 17 1_555 D DC 4 B O2 DC 4 1_555 hydrog WATSON-CRICK C DG 17 A O6 DG 17 1_555 D DC 4 B N4 DC 4 1_555 hydrog WATSON-CRICK C DC 18 A N3 DC 18 1_555 D DG 3 B N1 DG 3 1_555 hydrog WATSON-CRICK C DC 18 A N4 DC 18 1_555 D DG 3 B O6 DG 3 1_555 hydrog WATSON-CRICK C DC 18 A O2 DC 18 1_555 D DG 3 B N2 DG 3 1_555 hydrog WATSON-CRICK C DC 19 A N3 DC 19 1_555 D DG 2 B N1 DG 2 1_555 hydrog WATSON-CRICK C DC 19 A N4 DC 19 1_555 D DG 2 B O6 DG 2 1_555 hydrog WATSON-CRICK C DC 19 A O2 DC 19 1_555 D DG 2 B N2 DG 2 1_555 hydrog WATSON-CRICK C DG 20 A N1 DG 20 1_555 D DC 1 B N3 DC 1 1_555 hydrog WATSON-CRICK C DG 20 A N2 DG 20 1_555 D DC 1 B O2 DC 1 1_555 hydrog WATSON-CRICK C DG 20 A O6 DG 20 1_555 D DC 1 B N4 DC 1 1_555 TRANSCRIPTION/DNA COMPLEX (TRANSCRIPTION FACTOR-DNA), DNA-BINDING, TRANSCRIPTION REGULATION, ACTIVATOR NUCLEAR PROTEIN, PHOSPHORYLATION, CONFORMATION, TRANSCRIPTION-DNA COMPLEX TF65_MOUSE UNP 2 19 Q04207 2RAM PDB 1 2RAM 19 291 2RAM 19 291 Q04207 A 1 1 273 19 291 2RAM 19 291 Q04207 B 1 1 273 1 20 2RAM 1 20 2RAM C 2 1 20 1 20 2RAM 1 20 2RAM D 2 1 20 3 4 2 5 3 3 4 2 5 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 110 C ILE 92 A PHE 113 C PHE 95 A PRO 59 C PRO 41 A ASN 64 C ASN 46 A TYR 20 C TYR 2 A GLU 25 C GLU 7 A TYR 100 C TYR 82 A ASP 103 C ASP 85 A THR 71 C THR 53 A THR 78 C THR 60 A VAL 157 C VAL 139 A ARG 166 C ARG 148 A PRO 172 C PRO 154 A LEU 174 C LEU 156 A GLU 89 C GLU 71 A VAL 91 C VAL 73 A GLY 117 C GLY 99 A GLN 119 C GLN 101 A SER 203 C SER 185 A SER 205 C SER 187 A MET 284 C MET 266 A LEU 289 C LEU 271 A VAL 266 C VAL 248 A ARG 273 C ARG 255 A GLU 225 C GLU 207 A GLY 230 C GLY 212 A TRP 233 C TRP 215 A ARG 236 C ARG 218 A ALA 249 C ALA 231 A ARG 253 C ARG 235 A GLU 211 C GLU 193 A CYS 216 C CYS 198 A ILE 196 C ILE 178 A VAL 199 C VAL 181 B ILE 110 D ILE 92 B PHE 113 D PHE 95 B PRO 59 D PRO 41 B ASN 64 D ASN 46 B TYR 20 D TYR 2 B GLU 25 D GLU 7 B TYR 99 D TYR 81 B ALA 102 D ALA 84 B GLY 70 D GLY 52 B VAL 77 D VAL 59 B ARG 158 D ARG 140 B ARG 166 D ARG 148 B PRO 172 D PRO 154 B LEU 174 D LEU 156 B GLU 89 D GLU 71 B VAL 91 D VAL 73 B GLY 117 D GLY 99 B GLN 119 D GLN 101 B SER 203 D SER 185 B SER 205 D SER 187 B MET 284 D MET 266 B LEU 289 D LEU 271 B VAL 266 D VAL 248 B ARG 273 D ARG 255 B GLU 225 D GLU 207 B GLY 230 D GLY 212 B TRP 233 D TRP 215 B ARG 236 D ARG 218 B ALA 249 D ALA 231 B ARG 253 D ARG 235 B GLU 211 D GLU 193 B CYS 216 D CYS 198 B ILE 196 D ILE 178 B VAL 199 D VAL 181 BINDING SITE FOR RESIDUE DTV A 501 A DTV 501 Software 2 BINDING SITE FOR RESIDUE DTV B 502 B DTV 502 Software 3 A ASP 80 C ASP 62 2 1_555 A ASP 153 C ASP 135 2 1_555 B ASP 80 D ASP 62 3 1_555 B ASP 151 D ASP 133 3 1_555 B ASP 153 D ASP 135 3 1_555 19 P 21 21 21