0.016539 0.009549 0.000000 0.000000 0.019098 0.000000 0.000000 0.000000 0.010416 0.00000 0.00000 0.00000 Graves, A.P. Boyce, S.E. Shoichet, B.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 60.462 60.462 96.004 C8 H9 Cl O 156.609 (2-chloroethoxy)benzene non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C N 7 N O N 8 N C N 9 N C N 10 N CL N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N N N 21 S C N 22 N C N 23 N O N 24 N C N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N N N 34 S C N 35 N C N 36 N O N 37 N C N 38 N C N 39 N C N 40 N N N 41 N C N 42 N N N 43 N N N 44 N O N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N N N 61 S C N 62 N C N 63 N O N 64 N C N 65 N C N 66 N O N 67 N N N 68 N O N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N N N 78 S C N 79 N C N 80 N O N 81 N C N 82 N C N 83 N O N 84 N O N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N N N 94 R C N 95 N C N 96 N O N 97 N C N 98 N S N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N C N 113 N C N 114 N O N 115 N N N 116 N O N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 S C N 129 N C N 130 N O N 131 N C N 132 N C N 133 N C N 134 N O N 135 N O N 136 N O N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 N C N 148 N C N 149 N O N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N N N 157 S C N 158 N C N 159 N O N 160 N C Y 161 N C Y 162 N N Y 163 N C Y 164 N C Y 165 N N N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N O N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 S C N 185 N C N 186 N C N 187 N C N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N N N 203 S C N 204 N C N 205 N O N 206 N C N 207 N C N 208 N C N 209 N C N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N N N 225 S C N 226 N C N 227 N O N 228 N C N 229 N C N 230 N C N 231 N C N 232 N N N 233 N O N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N N N 250 S C N 251 N C N 252 N O N 253 N C N 254 N C N 255 N S N 256 N C N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N N N 270 S C N 271 N C N 272 N O N 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C Y 278 N C Y 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N P N 293 N O N 294 N O N 295 N O N 296 N O N 297 N N N 298 S C N 299 N C N 300 N O N 301 N C N 302 N C N 303 N C N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 N C N 319 N O N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 R C N 333 N O N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N N Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C N 383 N O N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N N N 397 S C N 398 N C N 399 N O N 400 N C N 401 N C N 402 N C N 403 N O N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N doub Y 5 N sing Y 6 N doub N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N doub N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing Y 159 N sing Y 160 N doub Y 161 N doub N 162 N sing Y 163 N sing N 164 N sing Y 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N doub N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing Y 267 N doub Y 268 N sing Y 269 N sing N 270 N sing Y 271 N doub N 272 N sing Y 273 N doub N 274 N sing Y 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing Y 340 N doub Y 341 N sing Y 342 N sing N 343 N sing Y 344 N doub Y 345 N sing Y 346 N sing N 347 N sing Y 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N doub Y 369 N sing Y 370 N sing N 371 N sing Y 372 N doub N 373 N sing Y 374 N doub N 375 N sing Y 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 377 914 934 10.1016/j.jmb.2008.01.049 18280498 Rescoring docking hit lists for model cavity sites: predictions and experimental testing. 2008 10.2210/pdb2ray/pdb pdb_00002ray 110 1 IMAGE PLATE 2006-11-26 RIGAKU RAXIS IV SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 18359.023 Lysozyme 3.2.1.17 L99A 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 156.609 (2-chloroethoxy)benzene 1 syn non-polymer 18.015 water 212 nat water Lysis protein; Muramidase; Endolysin E.C.3.2.1.17 no no MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILR NAKLKPVYDSLDAVRRAAAINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YK MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILR NAKLKPVYDSLDAVRRAAAINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YK X polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n T4-like viruses Enterobacteria phage T4 sensu lato Escherichia sample E 10665 Enterobacteria phage T4 562 Escherichia coli plasmid M13 1 2.76 55.41 hanging drop 7.1 2.2M sodium-potassium phosphate, 0.05M beta-mercaptoethanol, 0.05M 2-hydroxyethyldisulfide, pH 7.1, hanging drop, temperature 277K 277 pdbx_unobs_or_zero_occ_atoms software database_2 pdbx_unobs_or_zero_occ_atoms struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Advisory Refinement description Advisory Database references Derived calculations Data collection Refinement description 1 0 2008-03-18 1 1 2011-07-13 1 2 2017-10-25 1 3 2021-10-20 1 4 2023-08-30 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id N RCSB Y RCSB 2007-09-17 REL REL PO4 PHOSPHATE ION 258 (2-chloroethoxy)benzene HOH water 184L PDB experimental model PO4 1001 2 PO4 PO4 1001 X 258 2001 3 258 258 2001 X HOH 1 4 HOH HOH 2002 X HOH 2 4 HOH HOH 2003 X HOH 3 4 HOH HOH 2004 X HOH 4 4 HOH HOH 2005 X HOH 5 4 HOH HOH 2006 X HOH 6 4 HOH HOH 2007 X HOH 7 4 HOH HOH 2008 X HOH 8 4 HOH HOH 2009 X HOH 9 4 HOH HOH 2010 X HOH 10 4 HOH HOH 2011 X HOH 11 4 HOH HOH 2012 X HOH 12 4 HOH HOH 2013 X HOH 13 4 HOH HOH 2014 X HOH 14 4 HOH HOH 2015 X HOH 15 4 HOH HOH 2016 X HOH 16 4 HOH HOH 2017 X HOH 17 4 HOH HOH 2018 X HOH 18 4 HOH HOH 2019 X HOH 19 4 HOH HOH 2020 X HOH 20 4 HOH HOH 2021 X HOH 21 4 HOH HOH 2022 X HOH 22 4 HOH HOH 2023 X HOH 23 4 HOH HOH 2024 X HOH 24 4 HOH HOH 2025 X HOH 25 4 HOH HOH 2026 X HOH 26 4 HOH HOH 2027 X HOH 27 4 HOH HOH 2028 X HOH 28 4 HOH HOH 2029 X HOH 29 4 HOH HOH 2030 X HOH 30 4 HOH HOH 2031 X HOH 31 4 HOH HOH 2032 X HOH 32 4 HOH HOH 2033 X HOH 33 4 HOH HOH 2034 X HOH 34 4 HOH HOH 2035 X HOH 35 4 HOH HOH 2036 X HOH 36 4 HOH HOH 2037 X HOH 37 4 HOH HOH 2038 X HOH 38 4 HOH HOH 2039 X HOH 39 4 HOH HOH 2040 X HOH 40 4 HOH HOH 2041 X HOH 41 4 HOH HOH 2042 X HOH 42 4 HOH HOH 2043 X HOH 43 4 HOH HOH 2044 X HOH 44 4 HOH HOH 2045 X HOH 45 4 HOH HOH 2046 X HOH 46 4 HOH HOH 2047 X HOH 47 4 HOH HOH 2048 X HOH 48 4 HOH HOH 2049 X HOH 49 4 HOH HOH 2050 X HOH 50 4 HOH HOH 2051 X HOH 51 4 HOH HOH 2052 X HOH 52 4 HOH HOH 2053 X HOH 53 4 HOH HOH 2054 X HOH 54 4 HOH HOH 2055 X HOH 55 4 HOH HOH 2056 X HOH 56 4 HOH HOH 2057 X HOH 57 4 HOH HOH 2058 X HOH 58 4 HOH HOH 2059 X HOH 59 4 HOH HOH 2060 X HOH 60 4 HOH HOH 2061 X HOH 61 4 HOH HOH 2062 X HOH 62 4 HOH HOH 2063 X HOH 63 4 HOH HOH 2064 X HOH 64 4 HOH HOH 2065 X HOH 65 4 HOH HOH 2066 X HOH 66 4 HOH HOH 2067 X HOH 67 4 HOH HOH 2068 X HOH 68 4 HOH HOH 2069 X HOH 69 4 HOH HOH 2070 X HOH 70 4 HOH HOH 2071 X HOH 71 4 HOH HOH 2072 X HOH 72 4 HOH HOH 2073 X HOH 73 4 HOH HOH 2074 X HOH 74 4 HOH HOH 2075 X HOH 75 4 HOH HOH 2076 X HOH 76 4 HOH HOH 2077 X HOH 77 4 HOH HOH 2078 X HOH 78 4 HOH HOH 2079 X HOH 79 4 HOH HOH 2080 X HOH 80 4 HOH HOH 2081 X HOH 81 4 HOH HOH 2082 X HOH 82 4 HOH HOH 2083 X HOH 83 4 HOH HOH 2084 X HOH 84 4 HOH HOH 2085 X HOH 85 4 HOH HOH 2086 X HOH 86 4 HOH HOH 2087 X HOH 87 4 HOH HOH 2088 X HOH 88 4 HOH HOH 2089 X HOH 89 4 HOH HOH 2090 X HOH 90 4 HOH HOH 2091 X HOH 91 4 HOH HOH 2092 X HOH 92 4 HOH HOH 2093 X HOH 93 4 HOH HOH 2094 X HOH 94 4 HOH HOH 2095 X HOH 95 4 HOH HOH 2096 X HOH 96 4 HOH HOH 2097 X HOH 97 4 HOH HOH 2098 X HOH 98 4 HOH HOH 2099 X HOH 99 4 HOH HOH 2100 X HOH 100 4 HOH HOH 2101 X HOH 101 4 HOH HOH 2102 X HOH 102 4 HOH HOH 2103 X HOH 103 4 HOH HOH 2104 X HOH 104 4 HOH HOH 2105 X HOH 105 4 HOH HOH 2106 X HOH 106 4 HOH HOH 2107 X HOH 107 4 HOH HOH 2108 X HOH 108 4 HOH HOH 2109 X HOH 109 4 HOH HOH 2110 X HOH 110 4 HOH HOH 2111 X HOH 111 4 HOH HOH 2112 X HOH 112 4 HOH HOH 2113 X HOH 113 4 HOH HOH 2114 X HOH 114 4 HOH HOH 2115 X HOH 115 4 HOH HOH 2116 X HOH 116 4 HOH HOH 2117 X HOH 117 4 HOH HOH 2118 X HOH 118 4 HOH HOH 2119 X HOH 119 4 HOH HOH 2120 X HOH 120 4 HOH HOH 2121 X HOH 121 4 HOH HOH 2122 X HOH 122 4 HOH HOH 2123 X HOH 123 4 HOH HOH 2124 X HOH 124 4 HOH HOH 2125 X HOH 125 4 HOH HOH 2126 X HOH 126 4 HOH HOH 2127 X HOH 127 4 HOH HOH 2128 X HOH 128 4 HOH HOH 2129 X HOH 129 4 HOH HOH 2130 X HOH 130 4 HOH HOH 2131 X HOH 131 4 HOH HOH 2132 X HOH 132 4 HOH HOH 2133 X HOH 133 4 HOH HOH 2134 X HOH 134 4 HOH HOH 2135 X HOH 135 4 HOH HOH 2136 X HOH 136 4 HOH HOH 2137 X HOH 137 4 HOH HOH 2138 X HOH 138 4 HOH HOH 2139 X HOH 139 4 HOH HOH 2140 X HOH 140 4 HOH HOH 2141 X HOH 141 4 HOH HOH 2142 X HOH 142 4 HOH HOH 2143 X HOH 143 4 HOH HOH 2144 X HOH 144 4 HOH HOH 2145 X HOH 145 4 HOH HOH 2146 X HOH 146 4 HOH HOH 2147 X HOH 147 4 HOH HOH 2148 X HOH 148 4 HOH HOH 2149 X HOH 149 4 HOH HOH 2150 X HOH 150 4 HOH HOH 2151 X HOH 151 4 HOH HOH 2152 X HOH 152 4 HOH HOH 2153 X HOH 153 4 HOH HOH 2154 X HOH 154 4 HOH HOH 2155 X HOH 155 4 HOH HOH 2156 X HOH 156 4 HOH HOH 2157 X HOH 157 4 HOH HOH 2158 X HOH 158 4 HOH HOH 2159 X HOH 159 4 HOH HOH 2160 X HOH 160 4 HOH HOH 2161 X HOH 161 4 HOH HOH 2162 X HOH 162 4 HOH HOH 2163 X HOH 163 4 HOH HOH 2164 X HOH 164 4 HOH HOH 2165 X HOH 165 4 HOH HOH 2166 X HOH 166 4 HOH HOH 2167 X HOH 167 4 HOH HOH 2168 X HOH 168 4 HOH HOH 2169 X HOH 169 4 HOH HOH 2170 X HOH 170 4 HOH HOH 2171 X HOH 171 4 HOH HOH 2172 X HOH 172 4 HOH HOH 2173 X HOH 173 4 HOH HOH 2174 X HOH 174 4 HOH HOH 2175 X HOH 175 4 HOH HOH 2176 X HOH 176 4 HOH HOH 2177 X HOH 177 4 HOH HOH 2178 X HOH 178 4 HOH HOH 2179 X HOH 179 4 HOH HOH 2180 X HOH 180 4 HOH HOH 2181 X HOH 181 4 HOH HOH 2182 X HOH 182 4 HOH HOH 2183 X HOH 183 4 HOH HOH 2184 X HOH 184 4 HOH HOH 2185 X HOH 185 4 HOH HOH 2186 X HOH 186 4 HOH HOH 2187 X HOH 187 4 HOH HOH 2188 X HOH 188 4 HOH HOH 2189 X HOH 189 4 HOH HOH 2190 X HOH 190 4 HOH HOH 2191 X HOH 191 4 HOH HOH 2192 X HOH 192 4 HOH HOH 2193 X HOH 193 4 HOH HOH 2194 X HOH 194 4 HOH HOH 2195 X HOH 195 4 HOH HOH 2196 X HOH 196 4 HOH HOH 2197 X HOH 197 4 HOH HOH 2198 X HOH 198 4 HOH HOH 2199 X HOH 199 4 HOH HOH 2200 X HOH 200 4 HOH HOH 2201 X HOH 201 4 HOH HOH 2202 X HOH 202 4 HOH HOH 2203 X HOH 203 4 HOH HOH 2204 X HOH 204 4 HOH HOH 2205 X HOH 205 4 HOH HOH 2206 X HOH 206 4 HOH HOH 2207 X HOH 207 4 HOH HOH 2208 X HOH 208 4 HOH HOH 2209 X HOH 209 4 HOH HOH 2210 X HOH 210 4 HOH HOH 2211 X HOH 211 4 HOH HOH 2212 X HOH 212 4 HOH HOH 2213 X MET 1 n 1 MET 1 X ASN 2 n 2 ASN 2 X ILE 3 n 3 ILE 3 X PHE 4 n 4 PHE 4 X GLU 5 n 5 GLU 5 X MET 6 n 6 MET 6 X LEU 7 n 7 LEU 7 X ARG 8 n 8 ARG 8 X ILE 9 n 9 ILE 9 X ASP 10 n 10 ASP 10 X GLU 11 n 11 GLU 11 X GLY 12 n 12 GLY 12 X LEU 13 n 13 LEU 13 X ARG 14 n 14 ARG 14 X LEU 15 n 15 LEU 15 X LYS 16 n 16 LYS 16 X ILE 17 n 17 ILE 17 X TYR 18 n 18 TYR 18 X LYS 19 n 19 LYS 19 X ASP 20 n 20 ASP 20 X THR 21 n 21 THR 21 X GLU 22 n 22 GLU 22 X GLY 23 n 23 GLY 23 X TYR 24 n 24 TYR 24 X TYR 25 n 25 TYR 25 X THR 26 n 26 THR 26 X ILE 27 n 27 ILE 27 X GLY 28 n 28 GLY 28 X ILE 29 n 29 ILE 29 X GLY 30 n 30 GLY 30 X HIS 31 n 31 HIS 31 X LEU 32 n 32 LEU 32 X LEU 33 n 33 LEU 33 X THR 34 n 34 THR 34 X LYS 35 n 35 LYS 35 X SER 36 n 36 SER 36 X PRO 37 n 37 PRO 37 X SER 38 n 38 SER 38 X LEU 39 n 39 LEU 39 X ASN 40 n 40 ASN 40 X ALA 41 n 41 ALA 41 X ALA 42 n 42 ALA 42 X LYS 43 n 43 LYS 43 X SER 44 n 44 SER 44 X GLU 45 n 45 GLU 45 X LEU 46 n 46 LEU 46 X ASP 47 n 47 ASP 47 X LYS 48 n 48 LYS 48 X ALA 49 n 49 ALA 49 X ILE 50 n 50 ILE 50 X GLY 51 n 51 GLY 51 X ARG 52 n 52 ARG 52 X ASN 53 n 53 ASN 53 X THR 54 n 54 THR 54 X ASN 55 n 55 ASN 55 X GLY 56 n 56 GLY 56 X VAL 57 n 57 VAL 57 X ILE 58 n 58 ILE 58 X THR 59 n 59 THR 59 X LYS 60 n 60 LYS 60 X ASP 61 n 61 ASP 61 X GLU 62 n 62 GLU 62 X ALA 63 n 63 ALA 63 X GLU 64 n 64 GLU 64 X LYS 65 n 65 LYS 65 X LEU 66 n 66 LEU 66 X PHE 67 n 67 PHE 67 X ASN 68 n 68 ASN 68 X GLN 69 n 69 GLN 69 X ASP 70 n 70 ASP 70 X VAL 71 n 71 VAL 71 X ASP 72 n 72 ASP 72 X ALA 73 n 73 ALA 73 X ALA 74 n 74 ALA 74 X VAL 75 n 75 VAL 75 X ARG 76 n 76 ARG 76 X GLY 77 n 77 GLY 77 X ILE 78 n 78 ILE 78 X LEU 79 n 79 LEU 79 X ARG 80 n 80 ARG 80 X ASN 81 n 81 ASN 81 X ALA 82 n 82 ALA 82 X LYS 83 n 83 LYS 83 X LEU 84 n 84 LEU 84 X LYS 85 n 85 LYS 85 X PRO 86 n 86 PRO 86 X VAL 87 n 87 VAL 87 X TYR 88 n 88 TYR 88 X ASP 89 n 89 ASP 89 X SER 90 n 90 SER 90 X LEU 91 n 91 LEU 91 X ASP 92 n 92 ASP 92 X ALA 93 n 93 ALA 93 X VAL 94 n 94 VAL 94 X ARG 95 n 95 ARG 95 X ARG 96 n 96 ARG 96 X ALA 97 n 97 ALA 97 X ALA 98 n 98 ALA 98 X ALA 99 n 99 ALA 99 X ILE 100 n 100 ILE 100 X ASN 101 n 101 ASN 101 X MET 102 n 102 MET 102 X VAL 103 n 103 VAL 103 X PHE 104 n 104 PHE 104 X GLN 105 n 105 GLN 105 X MET 106 n 106 MET 106 X GLY 107 n 107 GLY 107 X GLU 108 n 108 GLU 108 X THR 109 n 109 THR 109 X GLY 110 n 110 GLY 110 X VAL 111 n 111 VAL 111 X ALA 112 n 112 ALA 112 X GLY 113 n 113 GLY 113 X PHE 114 n 114 PHE 114 X THR 115 n 115 THR 115 X ASN 116 n 116 ASN 116 X SER 117 n 117 SER 117 X LEU 118 n 118 LEU 118 X ARG 119 n 119 ARG 119 X MET 120 n 120 MET 120 X LEU 121 n 121 LEU 121 X GLN 122 n 122 GLN 122 X GLN 123 n 123 GLN 123 X LYS 124 n 124 LYS 124 X ARG 125 n 125 ARG 125 X TRP 126 n 126 TRP 126 X ASP 127 n 127 ASP 127 X GLU 128 n 128 GLU 128 X ALA 129 n 129 ALA 129 X ALA 130 n 130 ALA 130 X VAL 131 n 131 VAL 131 X ASN 132 n 132 ASN 132 X LEU 133 n 133 LEU 133 X ALA 134 n 134 ALA 134 X LYS 135 n 135 LYS 135 X SER 136 n 136 SER 136 X ARG 137 n 137 ARG 137 X TRP 138 n 138 TRP 138 X TYR 139 n 139 TYR 139 X ASN 140 n 140 ASN 140 X GLN 141 n 141 GLN 141 X THR 142 n 142 THR 142 X PRO 143 n 143 PRO 143 X ASN 144 n 144 ASN 144 X ARG 145 n 145 ARG 145 X ALA 146 n 146 ALA 146 X LYS 147 n 147 LYS 147 X ARG 148 n 148 ARG 148 X VAL 149 n 149 VAL 149 X ILE 150 n 150 ILE 150 X THR 151 n 151 THR 151 X THR 152 n 152 THR 152 X PHE 153 n 153 PHE 153 X ARG 154 n 154 ARG 154 X THR 155 n 155 THR 155 X GLY 156 n 156 GLY 156 X THR 157 n 157 THR 157 X TRP 158 n 158 TRP 158 X ASP 159 n 159 ASP 159 X ALA 160 n 160 ALA 160 X TYR 161 n 161 TYR 161 X LYS 162 n 162 LYS 162 X author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 X N TYR 18 A N TYR 18 X O THR 26 A O THR 26 X N ILE 27 A N ILE 27 X O HIS 31 A O HIS 31 1 X CD LYS 16 A CD LYS 16 1 Y 1 X CE LYS 16 A CE LYS 16 1 Y 1 X NZ LYS 16 A NZ LYS 16 1 Y 1 X CG ARG 76 A CG ARG 76 0 Y 1 X CD ARG 76 A CD ARG 76 0 Y 1 X NE ARG 76 A NE ARG 76 0 Y 1 X CZ ARG 76 A CZ ARG 76 0 Y 1 X NH1 ARG 76 A NH1 ARG 76 0 Y 1 X NH2 ARG 76 A NH2 ARG 76 0 Y 1 X CZ ARG 80 A CZ ARG 80 1 Y 1 X NH1 ARG 80 A NH1 ARG 80 1 Y 1 X NH2 ARG 80 A NH2 ARG 80 1 Y 1 X CE LYS 83 A CE LYS 83 1 Y 1 X NZ LYS 83 A NZ LYS 83 1 Y 1 X NZ LYS 147 A NZ LYS 147 1 Y 1 X CB LYS 162 A CB LYS 162 0 Y 1 X CG LYS 162 A CG LYS 162 0 Y 1 X CD LYS 162 A CD LYS 162 0 Y 1 X CE LYS 162 A CE LYS 162 0 Y 1 X NZ LYS 162 A NZ LYS 162 0 Y 1 X X O O HOH HOH 2094 2180 2.12 1_555 5_555 1 X X O O GLY HOH 113 2140 2.17 1_555 2_654 1 X ILE 29 -101.46 73.53 20.548 0.120 0.060 0.000 0.120 0.000 -0.190 0.954 0.942 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.212 0.187 0.188 0.188 1.798 52.340 994 19464 19408 5.100 99.710 2.374 0.075 RANDOM 1 THROUGHOUT 0.00 0.119 0.111 0.800 0.800 1.200 184L MAXIMUM LIKELIHOOD MASK 1.798 52.340 213 1513 15 0 1285 0.014 0.022 1309 1.249 1.959 1766 5.250 5.000 163 32.478 23.833 60 13.223 15.000 233 16.870 15.000 11 0.088 0.200 196 0.005 0.020 977 0.197 0.200 649 0.303 0.200 908 0.152 0.200 163 0.183 0.200 32 0.207 0.200 30 0.786 1.500 830 1.236 2.000 1285 2.173 3.000 555 3.190 4.500 480 0.302 0.278 1.844 75 1314 1389 1904 20 98.930 1.798 52.34 2RAY 19492 19434 0.00 0.00 1 99.7 1.798 1.84 98.9 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html REFMAC program data extraction PDB sw-help@rcsb.rutgers.edu July 2, 2007 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 3.000 data collection HKL-3000 data reduction DENZO data scaling SCALEPACK data scaling HKL-3000 phasing REFMAC 5.2 N beta-chlorophenetole in complex with T4 lysozyme L99A 1 N N 2 N N 3 N N 4 N N X ASN 2 A ASN 2 HELX_P X GLY 12 A GLY 12 1 1 11 X SER 38 A SER 38 HELX_P X GLY 51 A GLY 51 1 2 14 X THR 59 A THR 59 HELX_P X ASN 81 A ASN 81 1 3 23 X LYS 83 A LYS 83 HELX_P X LEU 91 A LEU 91 1 4 9 X ASP 92 A ASP 92 HELX_P X GLY 113 A GLY 113 1 5 22 X PHE 114 A PHE 114 HELX_P X GLN 123 A GLN 123 1 6 10 X ARG 125 A ARG 125 HELX_P X ALA 134 A ALA 134 1 7 10 X SER 136 A SER 136 HELX_P X THR 142 A THR 142 1 8 7 X THR 142 A THR 142 HELX_P X GLY 156 A GLY 156 1 9 15 X TRP 158 A TRP 158 HELX_P X LYS 162 A LYS 162 5 10 5 HYDROLASE protein cavities, HYDROLASE LYS_BPT4 UNP 1 1 P00720 MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILR NAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YK 1 162 2RAY 1 162 P00720 X 1 1 162 1 CYS engineered mutation THR 54 2RAY X P00720 UNP 54 54 1 CYS engineered mutation ALA 97 2RAY X P00720 UNP 97 97 1 LEU engineered mutation ALA 99 2RAY X P00720 UNP 99 99 3 anti-parallel anti-parallel X ARG 14 A ARG 14 X LYS 19 A LYS 19 X TYR 25 A TYR 25 X GLY 28 A GLY 28 X HIS 31 A HIS 31 X LEU 32 A LEU 32 BINDING SITE FOR RESIDUE PO4 X 1001 X PO4 1001 Software 9 BINDING SITE FOR RESIDUE 258 X 2001 X 258 2001 Software 8 X ARG 14 A ARG 14 9 1_555 X LYS 19 A LYS 19 9 1_555 X ARG 125 A ARG 125 9 4_655 X TRP 126 A TRP 126 9 4_655 X ASP 127 A ASP 127 9 4_655 X GLU 128 A GLU 128 9 4_655 X HOH 2046 D HOH 9 4_655 X HOH 2149 D HOH 9 1_555 X HOH 2163 D HOH 9 1_555 X TYR 88 A TYR 88 8 1_555 X ALA 99 A ALA 99 8 1_555 X MET 102 A MET 102 8 1_555 X SER 117 A SER 117 8 1_555 X LEU 118 A LEU 118 8 1_555 X LEU 121 A LEU 121 8 1_555 X LEU 133 A LEU 133 8 1_555 X PHE 153 A PHE 153 8 1_555 154 P 32 2 1