0.019647
0.000000
0.000000
0.000000
0.013347
0.000000
0.000000
0.000000
0.009349
0.00000
0.00000
0.00000
Graves, A.P.
Boyce, S.E.
Shoichet, B.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
50.898
74.925
106.968
C6 H12 N2
112.173
cyclopentanecarboximidamide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
N
N
8
N
N
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
O
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
N
N
35
S
C
N
36
N
C
N
37
N
O
N
38
N
C
N
39
N
C
N
40
N
C
N
41
N
N
N
42
N
C
N
43
N
N
N
44
N
N
N
45
N
O
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
N
N
62
S
C
N
63
N
C
N
64
N
O
N
65
N
C
N
66
N
C
N
67
N
O
N
68
N
N
N
69
N
O
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
O
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
R
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
S
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
N
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
S
C
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
C
N
134
N
C
N
135
N
O
N
136
N
O
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
C
Y
161
N
C
Y
162
N
C
Y
163
N
C
Y
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
Y
178
N
C
Y
179
N
C
Y
180
N
C
Y
181
N
C
N
182
N
C
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
O
Y
195
N
N
N
196
N
N
Y
197
N
N
N
198
N
N
N
199
N
FE
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
Y
237
N
C
Y
238
N
N
Y
239
N
C
Y
240
N
C
Y
241
N
N
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
S
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
N
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
C
N
331
N
S
N
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
N
373
N
C
N
374
N
C
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
N
N
386
S
C
N
387
N
C
N
388
N
O
N
389
N
C
N
390
N
O
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
R
C
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
N
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
N
454
N
O
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
N
N
468
S
C
N
469
N
C
N
470
N
O
N
471
N
C
N
472
N
C
N
473
N
C
N
474
N
O
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
doub
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
doub
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
doub
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
Y
161
N
doub
Y
162
N
sing
Y
163
N
sing
N
164
N
sing
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
Y
193
N
sing
Y
194
N
sing
Y
195
N
doub
N
196
N
sing
Y
197
N
sing
N
198
N
sing
Y
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
Y
242
N
sing
Y
243
N
doub
Y
244
N
doub
N
245
N
sing
Y
246
N
sing
N
247
N
sing
Y
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
Y
419
N
doub
Y
420
N
sing
Y
421
N
sing
N
422
N
sing
Y
423
N
doub
Y
424
N
sing
Y
425
N
sing
N
426
N
sing
Y
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
Y
447
N
doub
Y
448
N
sing
Y
449
N
sing
N
450
N
sing
Y
451
N
doub
N
452
N
sing
Y
453
N
doub
N
454
N
sing
Y
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
377
914
934
10.1016/j.jmb.2008.01.049
18280498
Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
2008
10.2210/pdb2rbu/pdb
pdb_00002rbu
110.0
1
KOHZU: DOUBLE CRYSTAL SI(111)
CCD
2007-05-03
ADSC QUANTUM 315
KHOZU DOUBLE FLAT CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
1.115872
1.0
8.3.1
ALS
1.115872
SYNCHROTRON
ALS BEAMLINE 8.3.1
33198.867
Cytochrome C Peroxidase
1.11.1.5
W191G
1
man
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
112.173
cyclopentanecarboximidamide
1
syn
non-polymer
18.015
water
414
nat
water
E.C.1.11.1.5
no
no
TLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSN
AGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN
MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDP
KYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLEEQGL
TLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSN
AGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN
MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDP
KYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLEEQGL
X
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Saccharomyces
Saccharomyces cerevisiae
YJM789
Escherichia
Escherichia coli
sample
ccp1, ccp, cpo
307796
Saccharomyces cerevisiae
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
PT7CCP
1
3.09
60.13
6.00
MES, MPD, pH 6.0, vapor diffusion, hanging drop, temperature 291K, pH 6.00
291
software
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Source and taxonomy
Version format compliance
Refinement description
Database references
Derived calculations
Data collection
Refinement description
1
0
2008-03-18
1
1
2011-07-13
1
2
2017-10-25
1
3
2021-10-20
1
4
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
2,3,4-TRIMETHYL-1,3-THIAZOLE in complex with CCP W191G
N
RCSB
Y
RCSB
2007-09-19
REL
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
273
cyclopentanecarboximidamide
HOH
water
1AC4
PDB
experimental model
HEM
400
2
HEM
HEM
400
X
273
4001
3
273
273
4001
X
HOH
404
4
HOH
HOH
404
X
HOH
405
4
HOH
HOH
405
X
HOH
406
4
HOH
HOH
406
X
HOH
407
4
HOH
HOH
407
X
HOH
408
4
HOH
HOH
408
X
HOH
409
4
HOH
HOH
409
X
HOH
410
4
HOH
HOH
410
X
HOH
411
4
HOH
HOH
411
X
HOH
412
4
HOH
HOH
412
X
HOH
413
4
HOH
HOH
413
X
HOH
414
4
HOH
HOH
414
X
HOH
415
4
HOH
HOH
415
X
HOH
416
4
HOH
HOH
416
X
HOH
417
4
HOH
HOH
417
X
HOH
418
4
HOH
HOH
418
X
HOH
419
4
HOH
HOH
419
X
HOH
420
4
HOH
HOH
420
X
HOH
421
4
HOH
HOH
421
X
HOH
422
4
HOH
HOH
422
X
HOH
423
4
HOH
HOH
423
X
HOH
424
4
HOH
HOH
424
X
HOH
425
4
HOH
HOH
425
X
HOH
426
4
HOH
HOH
426
X
HOH
427
4
HOH
HOH
427
X
HOH
428
4
HOH
HOH
428
X
HOH
429
4
HOH
HOH
429
X
HOH
430
4
HOH
HOH
430
X
HOH
431
4
HOH
HOH
431
X
HOH
432
4
HOH
HOH
432
X
HOH
433
4
HOH
HOH
433
X
HOH
434
4
HOH
HOH
434
X
HOH
435
4
HOH
HOH
435
X
HOH
436
4
HOH
HOH
436
X
HOH
437
4
HOH
HOH
437
X
HOH
438
4
HOH
HOH
438
X
HOH
439
4
HOH
HOH
439
X
HOH
440
4
HOH
HOH
440
X
HOH
441
4
HOH
HOH
441
X
HOH
442
4
HOH
HOH
442
X
HOH
444
4
HOH
HOH
444
X
HOH
445
4
HOH
HOH
445
X
HOH
446
4
HOH
HOH
446
X
HOH
447
4
HOH
HOH
447
X
HOH
448
4
HOH
HOH
448
X
HOH
449
4
HOH
HOH
449
X
HOH
450
4
HOH
HOH
450
X
HOH
451
4
HOH
HOH
451
X
HOH
452
4
HOH
HOH
452
X
HOH
453
4
HOH
HOH
453
X
HOH
454
4
HOH
HOH
454
X
HOH
455
4
HOH
HOH
455
X
HOH
456
4
HOH
HOH
456
X
HOH
457
4
HOH
HOH
457
X
HOH
458
4
HOH
HOH
458
X
HOH
459
4
HOH
HOH
459
X
HOH
460
4
HOH
HOH
460
X
HOH
461
4
HOH
HOH
461
X
HOH
462
4
HOH
HOH
462
X
HOH
463
4
HOH
HOH
463
X
HOH
464
4
HOH
HOH
464
X
HOH
465
4
HOH
HOH
465
X
HOH
466
4
HOH
HOH
466
X
HOH
467
4
HOH
HOH
467
X
HOH
468
4
HOH
HOH
468
X
HOH
469
4
HOH
HOH
469
X
HOH
470
4
HOH
HOH
470
X
HOH
471
4
HOH
HOH
471
X
HOH
472
4
HOH
HOH
472
X
HOH
473
4
HOH
HOH
473
X
HOH
474
4
HOH
HOH
474
X
HOH
475
4
HOH
HOH
475
X
HOH
476
4
HOH
HOH
476
X
HOH
477
4
HOH
HOH
477
X
HOH
478
4
HOH
HOH
478
X
HOH
479
4
HOH
HOH
479
X
HOH
480
4
HOH
HOH
480
X
HOH
481
4
HOH
HOH
481
X
HOH
482
4
HOH
HOH
482
X
HOH
483
4
HOH
HOH
483
X
HOH
484
4
HOH
HOH
484
X
HOH
485
4
HOH
HOH
485
X
HOH
486
4
HOH
HOH
486
X
HOH
487
4
HOH
HOH
487
X
HOH
488
4
HOH
HOH
488
X
HOH
489
4
HOH
HOH
489
X
HOH
490
4
HOH
HOH
490
X
HOH
491
4
HOH
HOH
491
X
HOH
492
4
HOH
HOH
492
X
HOH
493
4
HOH
HOH
493
X
HOH
494
4
HOH
HOH
494
X
HOH
495
4
HOH
HOH
495
X
HOH
496
4
HOH
HOH
496
X
HOH
497
4
HOH
HOH
497
X
HOH
498
4
HOH
HOH
498
X
HOH
499
4
HOH
HOH
499
X
HOH
500
4
HOH
HOH
500
X
HOH
501
4
HOH
HOH
501
X
HOH
502
4
HOH
HOH
502
X
HOH
503
4
HOH
HOH
503
X
HOH
504
4
HOH
HOH
504
X
HOH
505
4
HOH
HOH
505
X
HOH
506
4
HOH
HOH
506
X
HOH
507
4
HOH
HOH
507
X
HOH
508
4
HOH
HOH
508
X
HOH
509
4
HOH
HOH
509
X
HOH
510
4
HOH
HOH
510
X
HOH
511
4
HOH
HOH
511
X
HOH
512
4
HOH
HOH
512
X
HOH
513
4
HOH
HOH
513
X
HOH
514
4
HOH
HOH
514
X
HOH
515
4
HOH
HOH
515
X
HOH
516
4
HOH
HOH
516
X
HOH
517
4
HOH
HOH
517
X
HOH
518
4
HOH
HOH
518
X
HOH
519
4
HOH
HOH
519
X
HOH
520
4
HOH
HOH
520
X
HOH
521
4
HOH
HOH
521
X
HOH
522
4
HOH
HOH
522
X
HOH
523
4
HOH
HOH
523
X
HOH
524
4
HOH
HOH
524
X
HOH
525
4
HOH
HOH
525
X
HOH
526
4
HOH
HOH
526
X
HOH
527
4
HOH
HOH
527
X
HOH
528
4
HOH
HOH
528
X
HOH
529
4
HOH
HOH
529
X
HOH
530
4
HOH
HOH
530
X
HOH
531
4
HOH
HOH
531
X
HOH
532
4
HOH
HOH
532
X
HOH
533
4
HOH
HOH
533
X
HOH
534
4
HOH
HOH
534
X
HOH
535
4
HOH
HOH
535
X
HOH
536
4
HOH
HOH
536
X
HOH
537
4
HOH
HOH
537
X
HOH
538
4
HOH
HOH
538
X
HOH
539
4
HOH
HOH
539
X
HOH
540
4
HOH
HOH
540
X
HOH
541
4
HOH
HOH
541
X
HOH
542
4
HOH
HOH
542
X
HOH
543
4
HOH
HOH
543
X
HOH
544
4
HOH
HOH
544
X
HOH
545
4
HOH
HOH
545
X
HOH
546
4
HOH
HOH
546
X
HOH
547
4
HOH
HOH
547
X
HOH
548
4
HOH
HOH
548
X
HOH
549
4
HOH
HOH
549
X
HOH
550
4
HOH
HOH
550
X
HOH
552
4
HOH
HOH
552
X
HOH
553
4
HOH
HOH
553
X
HOH
554
4
HOH
HOH
554
X
HOH
555
4
HOH
HOH
555
X
HOH
557
4
HOH
HOH
557
X
HOH
558
4
HOH
HOH
558
X
HOH
559
4
HOH
HOH
559
X
HOH
560
4
HOH
HOH
560
X
HOH
561
4
HOH
HOH
561
X
HOH
562
4
HOH
HOH
562
X
HOH
563
4
HOH
HOH
563
X
HOH
564
4
HOH
HOH
564
X
HOH
565
4
HOH
HOH
565
X
HOH
566
4
HOH
HOH
566
X
HOH
567
4
HOH
HOH
567
X
HOH
568
4
HOH
HOH
568
X
HOH
569
4
HOH
HOH
569
X
HOH
570
4
HOH
HOH
570
X
HOH
571
4
HOH
HOH
571
X
HOH
572
4
HOH
HOH
572
X
HOH
573
4
HOH
HOH
573
X
HOH
574
4
HOH
HOH
574
X
HOH
575
4
HOH
HOH
575
X
HOH
576
4
HOH
HOH
576
X
HOH
577
4
HOH
HOH
577
X
HOH
578
4
HOH
HOH
578
X
HOH
579
4
HOH
HOH
579
X
HOH
580
4
HOH
HOH
580
X
HOH
581
4
HOH
HOH
581
X
HOH
582
4
HOH
HOH
582
X
HOH
583
4
HOH
HOH
583
X
HOH
584
4
HOH
HOH
584
X
HOH
585
4
HOH
HOH
585
X
HOH
586
4
HOH
HOH
586
X
HOH
587
4
HOH
HOH
587
X
HOH
589
4
HOH
HOH
589
X
HOH
590
4
HOH
HOH
590
X
HOH
591
4
HOH
HOH
591
X
HOH
593
4
HOH
HOH
593
X
HOH
594
4
HOH
HOH
594
X
HOH
595
4
HOH
HOH
595
X
HOH
1001
4
HOH
HOH
1001
X
HOH
1002
4
HOH
HOH
1002
X
HOH
1003
4
HOH
HOH
1003
X
HOH
1004
4
HOH
HOH
1004
X
HOH
1005
4
HOH
HOH
1005
X
HOH
1006
4
HOH
HOH
1006
X
HOH
1007
4
HOH
HOH
1007
X
HOH
1008
4
HOH
HOH
1008
X
HOH
1010
4
HOH
HOH
1010
X
HOH
1011
4
HOH
HOH
1011
X
HOH
1012
4
HOH
HOH
1012
X
HOH
1013
4
HOH
HOH
1013
X
HOH
1014
4
HOH
HOH
1014
X
HOH
1015
4
HOH
HOH
1015
X
HOH
1016
4
HOH
HOH
1016
X
HOH
1017
4
HOH
HOH
1017
X
HOH
1018
4
HOH
HOH
1018
X
HOH
1019
4
HOH
HOH
1019
X
HOH
1020
4
HOH
HOH
1020
X
HOH
1021
4
HOH
HOH
1021
X
HOH
1023
4
HOH
HOH
1023
X
HOH
1024
4
HOH
HOH
1024
X
HOH
1025
4
HOH
HOH
1025
X
HOH
1026
4
HOH
HOH
1026
X
HOH
1027
4
HOH
HOH
1027
X
HOH
1028
4
HOH
HOH
1028
X
HOH
1029
4
HOH
HOH
1029
X
HOH
1030
4
HOH
HOH
1030
X
HOH
1032
4
HOH
HOH
1032
X
HOH
1033
4
HOH
HOH
1033
X
HOH
1034
4
HOH
HOH
1034
X
HOH
1036
4
HOH
HOH
1036
X
HOH
1037
4
HOH
HOH
1037
X
HOH
1038
4
HOH
HOH
1038
X
HOH
1039
4
HOH
HOH
1039
X
HOH
1041
4
HOH
HOH
1041
X
HOH
1042
4
HOH
HOH
1042
X
HOH
1043
4
HOH
HOH
1043
X
HOH
1044
4
HOH
HOH
1044
X
HOH
1045
4
HOH
HOH
1045
X
HOH
1046
4
HOH
HOH
1046
X
HOH
1047
4
HOH
HOH
1047
X
HOH
1048
4
HOH
HOH
1048
X
HOH
1049
4
HOH
HOH
1049
X
HOH
1050
4
HOH
HOH
1050
X
HOH
1052
4
HOH
HOH
1052
X
HOH
1053
4
HOH
HOH
1053
X
HOH
1054
4
HOH
HOH
1054
X
HOH
1055
4
HOH
HOH
1055
X
HOH
1056
4
HOH
HOH
1056
X
HOH
1057
4
HOH
HOH
1057
X
HOH
1058
4
HOH
HOH
1058
X
HOH
1059
4
HOH
HOH
1059
X
HOH
1060
4
HOH
HOH
1060
X
HOH
1061
4
HOH
HOH
1061
X
HOH
1062
4
HOH
HOH
1062
X
HOH
1063
4
HOH
HOH
1063
X
HOH
1064
4
HOH
HOH
1064
X
HOH
1065
4
HOH
HOH
1065
X
HOH
1066
4
HOH
HOH
1066
X
HOH
1067
4
HOH
HOH
1067
X
HOH
1068
4
HOH
HOH
1068
X
HOH
1069
4
HOH
HOH
1069
X
HOH
1070
4
HOH
HOH
1070
X
HOH
1071
4
HOH
HOH
1071
X
HOH
1072
4
HOH
HOH
1072
X
HOH
1073
4
HOH
HOH
1073
X
HOH
1074
4
HOH
HOH
1074
X
HOH
1075
4
HOH
HOH
1075
X
HOH
1076
4
HOH
HOH
1076
X
HOH
1077
4
HOH
HOH
1077
X
HOH
1078
4
HOH
HOH
1078
X
HOH
1079
4
HOH
HOH
1079
X
HOH
1080
4
HOH
HOH
1080
X
HOH
1082
4
HOH
HOH
1082
X
HOH
1083
4
HOH
HOH
1083
X
HOH
1084
4
HOH
HOH
1084
X
HOH
1085
4
HOH
HOH
1085
X
HOH
1086
4
HOH
HOH
1086
X
HOH
1087
4
HOH
HOH
1087
X
HOH
1088
4
HOH
HOH
1088
X
HOH
1089
4
HOH
HOH
1089
X
HOH
1090
4
HOH
HOH
1090
X
HOH
1091
4
HOH
HOH
1091
X
HOH
1092
4
HOH
HOH
1092
X
HOH
1093
4
HOH
HOH
1093
X
HOH
1094
4
HOH
HOH
1094
X
HOH
1095
4
HOH
HOH
1095
X
HOH
1097
4
HOH
HOH
1097
X
HOH
1098
4
HOH
HOH
1098
X
HOH
1099
4
HOH
HOH
1099
X
HOH
1100
4
HOH
HOH
1100
X
HOH
1102
4
HOH
HOH
1102
X
HOH
1103
4
HOH
HOH
1103
X
HOH
1104
4
HOH
HOH
1104
X
HOH
1105
4
HOH
HOH
1105
X
HOH
1106
4
HOH
HOH
1106
X
HOH
1107
4
HOH
HOH
1107
X
HOH
1108
4
HOH
HOH
1108
X
HOH
1109
4
HOH
HOH
1109
X
HOH
1110
4
HOH
HOH
1110
X
HOH
1111
4
HOH
HOH
1111
X
HOH
1112
4
HOH
HOH
1112
X
HOH
1113
4
HOH
HOH
1113
X
HOH
1114
4
HOH
HOH
1114
X
HOH
1115
4
HOH
HOH
1115
X
HOH
1116
4
HOH
HOH
1116
X
HOH
1117
4
HOH
HOH
1117
X
HOH
1118
4
HOH
HOH
1118
X
HOH
1119
4
HOH
HOH
1119
X
HOH
1120
4
HOH
HOH
1120
X
HOH
1121
4
HOH
HOH
1121
X
HOH
1122
4
HOH
HOH
1122
X
HOH
1123
4
HOH
HOH
1123
X
HOH
1124
4
HOH
HOH
1124
X
HOH
1125
4
HOH
HOH
1125
X
HOH
1126
4
HOH
HOH
1126
X
HOH
1127
4
HOH
HOH
1127
X
HOH
1129
4
HOH
HOH
1129
X
HOH
1130
4
HOH
HOH
1130
X
HOH
1131
4
HOH
HOH
1131
X
HOH
1132
4
HOH
HOH
1132
X
HOH
1133
4
HOH
HOH
1133
X
HOH
1134
4
HOH
HOH
1134
X
HOH
1135
4
HOH
HOH
1135
X
HOH
1136
4
HOH
HOH
1136
X
HOH
1137
4
HOH
HOH
1137
X
HOH
1138
4
HOH
HOH
1138
X
HOH
1140
4
HOH
HOH
1140
X
HOH
1141
4
HOH
HOH
1141
X
HOH
1142
4
HOH
HOH
1142
X
HOH
1143
4
HOH
HOH
1143
X
HOH
1144
4
HOH
HOH
1144
X
HOH
1145
4
HOH
HOH
1145
X
HOH
1147
4
HOH
HOH
1147
X
HOH
1148
4
HOH
HOH
1148
X
HOH
1151
4
HOH
HOH
1151
X
HOH
1152
4
HOH
HOH
1152
X
HOH
1153
4
HOH
HOH
1153
X
HOH
1155
4
HOH
HOH
1155
X
HOH
1156
4
HOH
HOH
1156
X
HOH
1157
4
HOH
HOH
1157
X
HOH
1158
4
HOH
HOH
1158
X
HOH
1159
4
HOH
HOH
1159
X
HOH
1160
4
HOH
HOH
1160
X
HOH
1161
4
HOH
HOH
1161
X
HOH
1163
4
HOH
HOH
1163
X
HOH
1166
4
HOH
HOH
1166
X
HOH
1167
4
HOH
HOH
1167
X
HOH
1171
4
HOH
HOH
1171
X
HOH
1176
4
HOH
HOH
1176
X
HOH
1177
4
HOH
HOH
1177
X
HOH
1179
4
HOH
HOH
1179
X
HOH
1180
4
HOH
HOH
1180
X
HOH
1181
4
HOH
HOH
1181
X
HOH
1182
4
HOH
HOH
1182
X
HOH
1183
4
HOH
HOH
1183
X
HOH
1184
4
HOH
HOH
1184
X
HOH
1186
4
HOH
HOH
1186
X
HOH
1187
4
HOH
HOH
1187
X
HOH
1189
4
HOH
HOH
1189
X
HOH
1190
4
HOH
HOH
1190
X
HOH
1191
4
HOH
HOH
1191
X
HOH
1192
4
HOH
HOH
1192
X
HOH
1193
4
HOH
HOH
1193
X
HOH
1194
4
HOH
HOH
1194
X
HOH
1195
4
HOH
HOH
1195
X
HOH
1197
4
HOH
HOH
1197
X
HOH
1198
4
HOH
HOH
1198
X
HOH
1199
4
HOH
HOH
1199
X
HOH
1200
4
HOH
HOH
1200
X
HOH
1201
4
HOH
HOH
1201
X
HOH
1202
4
HOH
HOH
1202
X
HOH
1203
4
HOH
HOH
1203
X
HOH
1204
4
HOH
HOH
1204
X
HOH
1208
4
HOH
HOH
1208
X
HOH
1210
4
HOH
HOH
1210
X
HOH
1213
4
HOH
HOH
1213
X
HOH
1215
4
HOH
HOH
1215
X
HOH
1216
4
HOH
HOH
1216
X
HOH
1218
4
HOH
HOH
1218
X
HOH
1219
4
HOH
HOH
1219
X
HOH
1220
4
HOH
HOH
1220
X
HOH
1223
4
HOH
HOH
1223
X
HOH
1226
4
HOH
HOH
1226
X
HOH
1238
4
HOH
HOH
1238
X
HOH
1247
4
HOH
HOH
1247
X
HOH
1248
4
HOH
HOH
1248
X
HOH
1249
4
HOH
HOH
1249
X
HOH
1250
4
HOH
HOH
1250
X
HOH
1251
4
HOH
HOH
1251
X
HOH
1252
4
HOH
HOH
1252
X
HOH
1253
4
HOH
HOH
1253
X
HOH
1254
4
HOH
HOH
1254
X
HOH
1255
4
HOH
HOH
1255
X
HOH
1256
4
HOH
HOH
1256
X
HOH
1257
4
HOH
HOH
1257
X
HOH
1258
4
HOH
HOH
1258
X
HOH
1259
4
HOH
HOH
1259
X
HOH
1261
4
HOH
HOH
1261
X
HOH
1262
4
HOH
HOH
1262
X
HOH
1263
4
HOH
HOH
1263
X
HOH
1264
4
HOH
HOH
1264
X
HOH
1266
4
HOH
HOH
1266
X
HOH
1267
4
HOH
HOH
1267
X
HOH
1269
4
HOH
HOH
1269
X
HOH
1270
4
HOH
HOH
1270
X
HOH
1271
4
HOH
HOH
1271
X
HOH
1272
4
HOH
HOH
1272
X
HOH
1273
4
HOH
HOH
1273
X
HOH
1274
4
HOH
HOH
1274
X
HOH
1275
4
HOH
HOH
1275
X
HOH
1276
4
HOH
HOH
1276
X
HOH
1277
4
HOH
HOH
1277
X
HOH
1278
4
HOH
HOH
1278
X
HOH
1279
4
HOH
HOH
1279
X
HOH
1280
4
HOH
HOH
1280
X
HOH
1281
4
HOH
HOH
1281
X
HOH
1282
4
HOH
HOH
1282
X
HOH
1283
4
HOH
HOH
1283
X
HOH
1284
4
HOH
HOH
1284
X
HOH
1285
4
HOH
HOH
1285
X
HOH
1286
4
HOH
HOH
1286
X
HOH
1287
4
HOH
HOH
1287
X
HOH
1288
4
HOH
HOH
1288
X
HOH
1289
4
HOH
HOH
1289
X
HOH
1290
4
HOH
HOH
1290
X
THR
3
n
1
THR
3
X
LEU
4
n
2
LEU
4
X
VAL
5
n
3
VAL
5
X
HIS
6
n
4
HIS
6
X
VAL
7
n
5
VAL
7
X
ALA
8
n
6
ALA
8
X
SER
9
n
7
SER
9
X
VAL
10
n
8
VAL
10
X
GLU
11
n
9
GLU
11
X
LYS
12
n
10
LYS
12
X
GLY
13
n
11
GLY
13
X
ARG
14
n
12
ARG
14
X
SER
15
n
13
SER
15
X
TYR
16
n
14
TYR
16
X
GLU
17
n
15
GLU
17
X
ASP
18
n
16
ASP
18
X
PHE
19
n
17
PHE
19
X
GLN
20
n
18
GLN
20
X
LYS
21
n
19
LYS
21
X
VAL
22
n
20
VAL
22
X
TYR
23
n
21
TYR
23
X
ASN
24
n
22
ASN
24
X
ALA
25
n
23
ALA
25
X
ILE
26
n
24
ILE
26
X
ALA
27
n
25
ALA
27
X
LEU
28
n
26
LEU
28
X
LYS
29
n
27
LYS
29
X
LEU
30
n
28
LEU
30
X
ARG
31
n
29
ARG
31
X
GLU
32
n
30
GLU
32
X
ASP
33
n
31
ASP
33
X
ASP
34
n
32
ASP
34
X
GLU
35
n
33
GLU
35
X
TYR
36
n
34
TYR
36
X
ASP
37
n
35
ASP
37
X
ASN
38
n
36
ASN
38
X
TYR
39
n
37
TYR
39
X
ILE
40
n
38
ILE
40
X
GLY
41
n
39
GLY
41
X
TYR
42
n
40
TYR
42
X
GLY
43
n
41
GLY
43
X
PRO
44
n
42
PRO
44
X
VAL
45
n
43
VAL
45
X
LEU
46
n
44
LEU
46
X
VAL
47
n
45
VAL
47
X
ARG
48
n
46
ARG
48
X
LEU
49
n
47
LEU
49
X
ALA
50
n
48
ALA
50
X
TRP
51
n
49
TRP
51
X
HIS
52
n
50
HIS
52
X
ILE
53
n
51
ILE
53
X
SER
54
n
52
SER
54
X
GLY
55
n
53
GLY
55
X
THR
56
n
54
THR
56
X
TRP
57
n
55
TRP
57
X
ASP
58
n
56
ASP
58
X
LYS
59
n
57
LYS
59
X
HIS
60
n
58
HIS
60
X
ASP
61
n
59
ASP
61
X
ASN
62
n
60
ASN
62
X
THR
63
n
61
THR
63
X
GLY
64
n
62
GLY
64
X
GLY
65
n
63
GLY
65
X
SER
66
n
64
SER
66
X
TYR
67
n
65
TYR
67
X
GLY
68
n
66
GLY
68
X
GLY
69
n
67
GLY
69
X
THR
70
n
68
THR
70
X
TYR
71
n
69
TYR
71
X
ARG
72
n
70
ARG
72
X
PHE
73
n
71
PHE
73
X
LYS
74
n
72
LYS
74
X
LYS
75
n
73
LYS
75
X
GLU
76
n
74
GLU
76
X
PHE
77
n
75
PHE
77
X
ASN
78
n
76
ASN
78
X
ASP
79
n
77
ASP
79
X
PRO
80
n
78
PRO
80
X
SER
81
n
79
SER
81
X
ASN
82
n
80
ASN
82
X
ALA
83
n
81
ALA
83
X
GLY
84
n
82
GLY
84
X
LEU
85
n
83
LEU
85
X
GLN
86
n
84
GLN
86
X
ASN
87
n
85
ASN
87
X
GLY
88
n
86
GLY
88
X
PHE
89
n
87
PHE
89
X
LYS
90
n
88
LYS
90
X
PHE
91
n
89
PHE
91
X
LEU
92
n
90
LEU
92
X
GLU
93
n
91
GLU
93
X
PRO
94
n
92
PRO
94
X
ILE
95
n
93
ILE
95
X
HIS
96
n
94
HIS
96
X
LYS
97
n
95
LYS
97
X
GLU
98
n
96
GLU
98
X
PHE
99
n
97
PHE
99
X
PRO
100
n
98
PRO
100
X
TRP
101
n
99
TRP
101
X
ILE
102
n
100
ILE
102
X
SER
103
n
101
SER
103
X
SER
104
n
102
SER
104
X
GLY
105
n
103
GLY
105
X
ASP
106
n
104
ASP
106
X
LEU
107
n
105
LEU
107
X
PHE
108
n
106
PHE
108
X
SER
109
n
107
SER
109
X
LEU
110
n
108
LEU
110
X
GLY
111
n
109
GLY
111
X
GLY
112
n
110
GLY
112
X
VAL
113
n
111
VAL
113
X
THR
114
n
112
THR
114
X
ALA
115
n
113
ALA
115
X
VAL
116
n
114
VAL
116
X
GLN
117
n
115
GLN
117
X
GLU
118
n
116
GLU
118
X
MET
119
n
117
MET
119
X
GLN
120
n
118
GLN
120
X
GLY
121
n
119
GLY
121
X
PRO
122
n
120
PRO
122
X
LYS
123
n
121
LYS
123
X
ILE
124
n
122
ILE
124
X
PRO
125
n
123
PRO
125
X
TRP
126
n
124
TRP
126
X
ARG
127
n
125
ARG
127
X
CYS
128
n
126
CYS
128
X
GLY
129
n
127
GLY
129
X
ARG
130
n
128
ARG
130
X
VAL
131
n
129
VAL
131
X
ASP
132
n
130
ASP
132
X
THR
133
n
131
THR
133
X
PRO
134
n
132
PRO
134
X
GLU
135
n
133
GLU
135
X
ASP
136
n
134
ASP
136
X
THR
137
n
135
THR
137
X
THR
138
n
136
THR
138
X
PRO
139
n
137
PRO
139
X
ASP
140
n
138
ASP
140
X
ASN
141
n
139
ASN
141
X
GLY
142
n
140
GLY
142
X
ARG
143
n
141
ARG
143
X
LEU
144
n
142
LEU
144
X
PRO
145
n
143
PRO
145
X
ASP
146
n
144
ASP
146
X
ALA
147
n
145
ALA
147
X
ASP
148
n
146
ASP
148
X
LYS
149
n
147
LYS
149
X
ASP
150
n
148
ASP
150
X
ALA
151
n
149
ALA
151
X
GLY
152
n
150
GLY
152
X
TYR
153
n
151
TYR
153
X
VAL
154
n
152
VAL
154
X
ARG
155
n
153
ARG
155
X
THR
156
n
154
THR
156
X
PHE
157
n
155
PHE
157
X
PHE
158
n
156
PHE
158
X
GLN
159
n
157
GLN
159
X
ARG
160
n
158
ARG
160
X
LEU
161
n
159
LEU
161
X
ASN
162
n
160
ASN
162
X
MET
163
n
161
MET
163
X
ASN
164
n
162
ASN
164
X
ASP
165
n
163
ASP
165
X
ARG
166
n
164
ARG
166
X
GLU
167
n
165
GLU
167
X
VAL
168
n
166
VAL
168
X
VAL
169
n
167
VAL
169
X
ALA
170
n
168
ALA
170
X
LEU
171
n
169
LEU
171
X
MET
172
n
170
MET
172
X
GLY
173
n
171
GLY
173
X
ALA
174
n
172
ALA
174
X
HIS
175
n
173
HIS
175
X
ALA
176
n
174
ALA
176
X
LEU
177
n
175
LEU
177
X
GLY
178
n
176
GLY
178
X
LYS
179
n
177
LYS
179
X
THR
180
n
178
THR
180
X
HIS
181
n
179
HIS
181
X
LEU
182
n
180
LEU
182
X
LYS
183
n
181
LYS
183
X
ASN
184
n
182
ASN
184
X
SER
185
n
183
SER
185
X
GLY
186
n
184
GLY
186
X
TYR
187
n
185
TYR
187
X
GLU
188
n
186
GLU
188
X
GLY
189
n
187
GLY
189
X
PRO
190
n
188
PRO
190
X
GLY
191
n
189
GLY
191
X
GLY
192
n
190
GLY
192
X
ALA
193
n
191
ALA
193
X
ALA
194
n
192
ALA
194
X
ASN
195
n
193
ASN
195
X
ASN
196
n
194
ASN
196
X
VAL
197
n
195
VAL
197
X
PHE
198
n
196
PHE
198
X
THR
199
n
197
THR
199
X
ASN
200
n
198
ASN
200
X
GLU
201
n
199
GLU
201
X
PHE
202
n
200
PHE
202
X
TYR
203
n
201
TYR
203
X
LEU
204
n
202
LEU
204
X
ASN
205
n
203
ASN
205
X
LEU
206
n
204
LEU
206
X
LEU
207
n
205
LEU
207
X
ASN
208
n
206
ASN
208
X
GLU
209
n
207
GLU
209
X
ASP
210
n
208
ASP
210
X
TRP
211
n
209
TRP
211
X
LYS
212
n
210
LYS
212
X
LEU
213
n
211
LEU
213
X
GLU
214
n
212
GLU
214
X
LYS
215
n
213
LYS
215
X
ASN
216
n
214
ASN
216
X
ASP
217
n
215
ASP
217
X
ALA
218
n
216
ALA
218
X
ASN
219
n
217
ASN
219
X
ASN
220
n
218
ASN
220
X
GLU
221
n
219
GLU
221
X
GLN
222
n
220
GLN
222
X
TRP
223
n
221
TRP
223
X
ASP
224
n
222
ASP
224
X
SER
225
n
223
SER
225
X
LYS
226
n
224
LYS
226
X
SER
227
n
225
SER
227
X
GLY
228
n
226
GLY
228
X
TYR
229
n
227
TYR
229
X
MET
230
n
228
MET
230
X
MET
231
n
229
MET
231
X
LEU
232
n
230
LEU
232
X
PRO
233
n
231
PRO
233
X
THR
234
n
232
THR
234
X
ASP
235
n
233
ASP
235
X
TYR
236
n
234
TYR
236
X
SER
237
n
235
SER
237
X
LEU
238
n
236
LEU
238
X
ILE
239
n
237
ILE
239
X
GLN
240
n
238
GLN
240
X
ASP
241
n
239
ASP
241
X
PRO
242
n
240
PRO
242
X
LYS
243
n
241
LYS
243
X
TYR
244
n
242
TYR
244
X
LEU
245
n
243
LEU
245
X
SER
246
n
244
SER
246
X
ILE
247
n
245
ILE
247
X
VAL
248
n
246
VAL
248
X
LYS
249
n
247
LYS
249
X
GLU
250
n
248
GLU
250
X
TYR
251
n
249
TYR
251
X
ALA
252
n
250
ALA
252
X
ASN
253
n
251
ASN
253
X
ASP
254
n
252
ASP
254
X
GLN
255
n
253
GLN
255
X
ASP
256
n
254
ASP
256
X
LYS
257
n
255
LYS
257
X
PHE
258
n
256
PHE
258
X
PHE
259
n
257
PHE
259
X
LYS
260
n
258
LYS
260
X
ASP
261
n
259
ASP
261
X
PHE
262
n
260
PHE
262
X
SER
263
n
261
SER
263
X
LYS
264
n
262
LYS
264
X
ALA
265
n
263
ALA
265
X
PHE
266
n
264
PHE
266
X
GLU
267
n
265
GLU
267
X
LYS
268
n
266
LYS
268
X
LEU
269
n
267
LEU
269
X
LEU
270
n
268
LEU
270
X
GLU
271
n
269
GLU
271
X
ASP
272
n
270
ASP
272
X
GLY
273
n
271
GLY
273
X
ILE
274
n
272
ILE
274
X
THR
275
n
273
THR
275
X
PHE
276
n
274
PHE
276
X
PRO
277
n
275
PRO
277
X
LYS
278
n
276
LYS
278
X
ASP
279
n
277
ASP
279
X
ALA
280
n
278
ALA
280
X
PRO
281
n
279
PRO
281
X
SER
282
n
280
SER
282
X
PRO
283
n
281
PRO
283
X
PHE
284
n
282
PHE
284
X
ILE
285
n
283
ILE
285
X
PHE
286
n
284
PHE
286
X
LYS
287
n
285
LYS
287
X
THR
288
n
286
THR
288
X
LEU
289
n
287
LEU
289
X
GLU
290
n
288
GLU
290
X
GLU
291
n
289
GLU
291
X
GLN
292
n
290
GLN
292
X
GLY
293
n
291
GLY
293
X
LEU
294
n
292
LEU
294
X
author_and_software_defined_assembly
PISA
1
monomeric
X
HIS
175
A
NE2
HIS
173
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
NA
HEM
1_555
96.7
X
HIS
175
A
NE2
HIS
173
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
NB
HEM
1_555
91.8
X
HEM
400
B
NA
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
NB
HEM
1_555
89.5
X
HIS
175
A
NE2
HIS
173
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
NC
HEM
1_555
89.5
X
HEM
400
B
NA
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
NC
HEM
1_555
173.7
X
HEM
400
B
NB
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
NC
HEM
1_555
90.4
X
HIS
175
A
NE2
HIS
173
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
ND
HEM
1_555
96.0
X
HEM
400
B
NA
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
ND
HEM
1_555
88.9
X
HEM
400
B
NB
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
ND
HEM
1_555
172.2
X
HEM
400
B
NC
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HEM
400
B
ND
HEM
1_555
90.4
X
HIS
175
A
NE2
HIS
173
1_555
X
HEM
400
B
FE
HEM
1_555
X
HOH
1047
D
O
HOH
1_555
177.7
X
HEM
400
B
NA
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HOH
1047
D
O
HOH
1_555
84.9
X
HEM
400
B
NB
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HOH
1047
D
O
HOH
1_555
86.6
X
HEM
400
B
NC
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HOH
1047
D
O
HOH
1_555
88.9
X
HEM
400
B
ND
HEM
1_555
X
HEM
400
B
FE
HEM
1_555
X
HOH
1047
D
O
HOH
1_555
85.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
X
N
HIS
6
A
N
HIS
4
X
O
THR
275
A
O
THR
273
X
N
LYS
212
A
N
LYS
210
X
O
ASP
224
A
O
ASP
222
X
N
TRP
223
A
N
TRP
221
X
O
MET
231
A
O
MET
229
1
X
CD
LYS
183
A
CD
LYS
181
1
Y
1
X
CE
LYS
183
A
CE
LYS
181
1
Y
1
X
NZ
LYS
183
A
NZ
LYS
181
1
Y
1
X
CG
LYS
278
A
CG
LYS
276
1
Y
1
X
CD
LYS
278
A
CD
LYS
276
1
Y
1
X
CE
LYS
278
A
CE
LYS
276
1
Y
1
X
NZ
LYS
278
A
NZ
LYS
276
1
Y
1
X
X
GLY
PRO
189
190
82.67
1
16.34
2.70
111.00
127.34
X
X
X
N
CA
C
GLU
GLU
GLU
188
188
188
N
1
X
LEU
4
-29.24
131.04
15.24
0.35000
0.00000
0.00000
0.76000
0.00000
-1.11000
0.957
0.933
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.195
0.159
0.161
1.80
30.00
1929
38433
38433
5.000
99.4
1.794
0.058
RANDOM
1
THROUGHOUT
0.000
0.098
0.100
0.80
0.80
1.40
1AC4
MAXIMUM LIKELIHOOD
MASK
1.80
30.00
414
2805
51
0
2340
0.016
0.022
2500
1.390
2.003
3408
6.410
5.000
302
34.984
24.885
131
12.691
15.000
400
23.695
15.000
11
0.101
0.200
334
0.007
0.020
1996
0.198
0.200
1303
0.308
0.200
1680
0.135
0.200
329
0.074
0.200
1
0.224
0.200
13
0.116
0.200
24
0.815
1.500
1503
1.271
2.000
2353
2.048
3.000
1157
2.934
4.500
1048
0.2400
0.1930
1.85
137
2670
20
99.89
1.800
50.000
2RBU
38753
0.000
0.05300
1
33.2000
4.300
99.4
0.10900
1.80
1.86
1
4.00
99.7
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
July 2, 2007
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
3.000
phasing
REFMAC
N
Cytochrome C Peroxidase in complex with cyclopentane-carboximidamide
1
N
N
2
N
N
3
N
N
4
N
N
X
SER
15
A
SER
13
HELX_P
X
ASP
33
A
ASP
31
1
1
19
X
GLU
35
A
GLU
33
HELX_P
X
ILE
40
A
ILE
38
1
2
6
X
TYR
42
A
TYR
40
HELX_P
X
GLY
55
A
GLY
53
1
3
14
X
GLY
69
A
GLY
67
HELX_P
X
ARG
72
A
ARG
70
5
4
4
X
PHE
73
A
PHE
71
HELX_P
X
ASN
78
A
ASN
76
1
5
6
X
ASP
79
A
ASP
77
HELX_P
X
GLY
84
A
GLY
82
5
6
6
X
LEU
85
A
LEU
83
HELX_P
X
PHE
99
A
PHE
97
1
7
15
X
SER
103
A
SER
101
HELX_P
X
MET
119
A
MET
117
1
8
17
X
PRO
134
A
PRO
132
HELX_P
X
THR
138
A
THR
136
5
9
5
X
ASP
150
A
ASP
148
HELX_P
X
ARG
160
A
ARG
158
1
10
11
X
ASN
164
A
ASN
162
HELX_P
X
GLY
173
A
GLY
171
1
11
10
X
ALA
174
A
ALA
172
HELX_P
X
LEU
177
A
LEU
175
5
12
4
X
HIS
181
A
HIS
179
HELX_P
X
GLY
186
A
GLY
184
1
13
6
X
ASN
200
A
ASN
198
HELX_P
X
GLU
209
A
GLU
207
1
14
10
X
LEU
232
A
LEU
230
HELX_P
X
ASP
241
A
ASP
239
1
15
10
X
ASP
241
A
ASP
239
HELX_P
X
ASN
253
A
ASN
251
1
16
13
X
ASP
254
A
ASP
252
HELX_P
X
ASP
272
A
ASP
270
1
17
19
X
THR
288
A
THR
286
HELX_P
X
GLY
293
A
GLY
291
1
18
6
metalc
2.071
X
HIS
175
A
NE2
HIS
173
1_555
X
HEM
400
B
FE
HEM
1_555
metalc
1.886
X
HEM
400
B
FE
HEM
1_555
X
HOH
1047
D
O
HOH
1_555
OXIDOREDUCTASE
oxidoreductase
A7A026_YEAST
UNP
1
72
A7A026
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK
YLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
72
362
2RBU
4
294
A7A026
X
1
2
292
1
THR
engineered mutation
ILE
53
2RBU
X
A7A026
UNP
121
51
1
TRP
engineered mutation
GLY
191
2RBU
X
A7A026
UNP
259
189
1
ASN
engineered mutation
ASP
272
2RBU
X
A7A026
UNP
340
270
2
3
parallel
anti-parallel
anti-parallel
X
HIS
6
A
HIS
4
X
VAL
7
A
VAL
5
X
ILE
274
A
ILE
272
X
THR
275
A
THR
273
X
TRP
211
A
TRP
209
X
LYS
215
A
LYS
213
X
GLU
221
A
GLU
219
X
SER
225
A
SER
223
X
MET
230
A
MET
228
X
MET
231
A
MET
229
BINDING SITE FOR RESIDUE HEM X 400
X
HEM
400
Software
23
BINDING SITE FOR RESIDUE 273 X 4001
X
273
4001
Software
5
X
PRO
44
A
PRO
42
23
1_555
X
ARG
48
A
ARG
46
23
1_555
X
TRP
51
A
TRP
49
23
1_555
X
PRO
145
A
PRO
143
23
1_555
X
ASP
146
A
ASP
144
23
1_555
X
ALA
147
A
ALA
145
23
1_555
X
LEU
171
A
LEU
169
23
1_555
X
MET
172
A
MET
170
23
1_555
X
ALA
174
A
ALA
172
23
1_555
X
HIS
175
A
HIS
173
23
1_555
X
LEU
177
A
LEU
175
23
1_555
X
GLY
178
A
GLY
176
23
1_555
X
LYS
179
A
LYS
177
23
1_555
X
THR
180
A
THR
178
23
1_555
X
HIS
181
A
HIS
179
23
1_555
X
ASN
184
A
ASN
182
23
1_555
X
SER
185
A
SER
183
23
1_555
X
LEU
232
A
LEU
230
23
1_555
X
THR
234
A
THR
232
23
1_555
X
HOH
418
D
HOH
23
1_555
X
HOH
424
D
HOH
23
1_555
X
HOH
459
D
HOH
23
1_555
X
HOH
1047
D
HOH
23
1_555
X
HIS
175
A
HIS
173
5
1_555
X
THR
180
A
THR
178
5
1_555
X
MET
230
A
MET
228
5
1_555
X
MET
231
A
MET
229
5
1_555
X
ASP
235
A
ASP
233
5
1_555
19
P 21 21 21