0.007452
0.000000
0.000000
0.000000
0.007452
0.000000
0.000000
0.000000
0.009936
0.00000
0.00000
0.00000
Colf, L.A.
Juo, Z.S.
Garcia, K.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
134.197
134.197
100.647
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Structure of the measles virus hemagglutinin: implications for host cell receptor attachment.
10.2210/pdb2rkc/pdb
pdb_00002rkc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2007-09-11
ADSC QUANTUM 315
Si 111 channel
SINGLE WAVELENGTH
M
x-ray
1
1.072
1.0
8.2.2
ALS
1.072, 1.072
SYNCHROTRON
ALS BEAMLINE 8.2.2
51232.430
Hemagglutinin
Extracellular domain (156-617)
N238I
1
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
non-polymer
18.015
water
66
nat
water
no
no
DVAAEELMNALVNSTLLETRTTNQFLAVSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVE
KPILSSKRSELSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGK
GVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKGKIQALCE
NPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPR
FKVSPYLFTVPIKEAGEDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPF
RLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCTVTREDGTNRR
DVAAEELMNALVNSTLLETRTTNQFLAVSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVE
KPILSSKRSELSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGK
GVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKGKIQALCE
NPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPR
FKVSPYLFTVPIKEAGEDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPF
RLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCTVTREDGTNRR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Morbillivirus
Edmonston strain
fall armyworm
Spodoptera
sample
Hemagglutinin
11234
Measles virus
7108
Spodoptera frugiperda
Hi 5
plasmid
pVL1393
2
4.42
72.19
VAPOR DIFFUSION, SITTING DROP
1.2M sodium dihydrogen phosphate, 0.3M di-potassium hydrogen phosphate, VAPOR DIFFUSION, SITTING DROP, temperature 295K
295
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_site
struct_site_gen
chem_comp
database_2
struct_ref_seq_dif
repository
Initial release
Carbohydrate remediation
repository
Remediation
Non-polymer description
Version format compliance
Data collection
Derived calculations
Structure summary
Database references
Structure summary
1
0
2007-11-20
1
1
2011-07-13
1
2
2020-07-29
1
3
2021-10-20
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2007-10-16
REL
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
NAG
200
2
NAG
NAG
618
A
NAG
215
2
NAG
NAG
619
A
WAT
1
3
HOH
HOH
1
A
WAT
2
3
HOH
HOH
2
A
WAT
3
3
HOH
HOH
3
A
WAT
4
3
HOH
HOH
4
A
WAT
5
3
HOH
HOH
5
A
WAT
6
3
HOH
HOH
6
A
WAT
7
3
HOH
HOH
7
A
WAT
9
3
HOH
HOH
9
A
WAT
10
3
HOH
HOH
10
A
WAT
11
3
HOH
HOH
11
A
WAT
12
3
HOH
HOH
12
A
WAT
13
3
HOH
HOH
13
A
WAT
14
3
HOH
HOH
14
A
WAT
15
3
HOH
HOH
15
A
WAT
16
3
HOH
HOH
16
A
WAT
17
3
HOH
HOH
17
A
WAT
18
3
HOH
HOH
18
A
WAT
19
3
HOH
HOH
19
A
WAT
20
3
HOH
HOH
20
A
WAT
21
3
HOH
HOH
21
A
WAT
22
3
HOH
HOH
22
A
WAT
23
3
HOH
HOH
23
A
WAT
24
3
HOH
HOH
24
A
WAT
25
3
HOH
HOH
25
A
WAT
26
3
HOH
HOH
26
A
WAT
27
3
HOH
HOH
27
A
WAT
30
3
HOH
HOH
30
A
WAT
31
3
HOH
HOH
31
A
WAT
32
3
HOH
HOH
32
A
WAT
33
3
HOH
HOH
33
A
WAT
34
3
HOH
HOH
34
A
WAT
35
3
HOH
HOH
35
A
WAT
37
3
HOH
HOH
37
A
WAT
38
3
HOH
HOH
38
A
WAT
39
3
HOH
HOH
39
A
WAT
40
3
HOH
HOH
40
A
WAT
41
3
HOH
HOH
41
A
WAT
42
3
HOH
HOH
42
A
WAT
44
3
HOH
HOH
44
A
WAT
45
3
HOH
HOH
45
A
WAT
46
3
HOH
HOH
46
A
WAT
48
3
HOH
HOH
48
A
WAT
49
3
HOH
HOH
49
A
WAT
50
3
HOH
HOH
50
A
WAT
52
3
HOH
HOH
52
A
WAT
53
3
HOH
HOH
53
A
WAT
54
3
HOH
HOH
54
A
WAT
55
3
HOH
HOH
55
A
WAT
56
3
HOH
HOH
56
A
WAT
57
3
HOH
HOH
57
A
WAT
58
3
HOH
HOH
58
A
WAT
59
3
HOH
HOH
59
A
WAT
60
3
HOH
HOH
60
A
WAT
61
3
HOH
HOH
61
A
WAT
62
3
HOH
HOH
62
A
WAT
64
3
HOH
HOH
64
A
WAT
65
3
HOH
HOH
65
A
WAT
66
3
HOH
HOH
66
A
WAT
67
3
HOH
HOH
67
A
WAT
68
3
HOH
HOH
68
A
WAT
69
3
HOH
HOH
69
A
WAT
70
3
HOH
HOH
70
A
WAT
71
3
HOH
HOH
71
A
WAT
72
3
HOH
HOH
72
A
WAT
73
3
HOH
HOH
73
A
WAT
74
3
HOH
HOH
74
A
n
1
156
A
n
2
157
A
n
3
158
A
n
4
159
A
n
5
160
A
n
6
161
A
n
7
162
A
n
8
163
A
n
9
164
A
n
10
165
A
n
11
166
A
n
12
167
A
n
13
168
A
n
14
169
A
n
15
170
A
n
16
171
A
n
17
172
A
n
18
173
A
n
19
174
A
n
20
175
A
n
21
176
A
n
22
177
A
n
23
178
A
n
24
179
A
n
25
180
A
n
26
181
A
n
27
182
A
n
28
183
A
n
29
184
A
n
30
185
A
n
31
186
A
n
32
187
A
n
33
188
A
SER
189
n
34
SER
189
A
GLY
190
n
35
GLY
190
A
PRO
191
n
36
PRO
191
A
THR
192
n
37
THR
192
A
THR
193
n
38
THR
193
A
ILE
194
n
39
ILE
194
A
ARG
195
n
40
ARG
195
A
GLY
196
n
41
GLY
196
A
GLN
197
n
42
GLN
197
A
PHE
198
n
43
PHE
198
A
SER
199
n
44
SER
199
A
ASN
200
n
45
ASN
200
A
MET
201
n
46
MET
201
A
SER
202
n
47
SER
202
A
LEU
203
n
48
LEU
203
A
SER
204
n
49
SER
204
A
LEU
205
n
50
LEU
205
A
LEU
206
n
51
LEU
206
A
ASP
207
n
52
ASP
207
A
LEU
208
n
53
LEU
208
A
TYR
209
n
54
TYR
209
A
LEU
210
n
55
LEU
210
A
GLY
211
n
56
GLY
211
A
ARG
212
n
57
ARG
212
A
GLY
213
n
58
GLY
213
A
TYR
214
n
59
TYR
214
A
ASN
215
n
60
ASN
215
A
VAL
216
n
61
VAL
216
A
SER
217
n
62
SER
217
A
SER
218
n
63
SER
218
A
ILE
219
n
64
ILE
219
A
VAL
220
n
65
VAL
220
A
THR
221
n
66
THR
221
A
MET
222
n
67
MET
222
A
THR
223
n
68
THR
223
A
SER
224
n
69
SER
224
A
GLN
225
n
70
GLN
225
A
GLY
226
n
71
GLY
226
A
MET
227
n
72
MET
227
A
TYR
228
n
73
TYR
228
A
GLY
229
n
74
GLY
229
A
GLY
230
n
75
GLY
230
A
THR
231
n
76
THR
231
A
TYR
232
n
77
TYR
232
A
LEU
233
n
78
LEU
233
A
VAL
234
n
79
VAL
234
A
GLU
235
n
80
GLU
235
A
LYS
236
n
81
LYS
236
A
PRO
237
n
82
PRO
237
A
ILE
238
n
83
ILE
238
A
n
84
239
A
n
85
240
A
n
86
241
A
n
87
242
A
n
88
243
A
n
89
244
A
n
90
245
A
n
91
246
A
n
92
247
A
GLN
248
n
93
GLN
248
A
LEU
249
n
94
LEU
249
A
SER
250
n
95
SER
250
A
MET
251
n
96
MET
251
A
TYR
252
n
97
TYR
252
A
ARG
253
n
98
ARG
253
A
VAL
254
n
99
VAL
254
A
PHE
255
n
100
PHE
255
A
GLU
256
n
101
GLU
256
A
VAL
257
n
102
VAL
257
A
GLY
258
n
103
GLY
258
A
VAL
259
n
104
VAL
259
A
ILE
260
n
105
ILE
260
A
ARG
261
n
106
ARG
261
A
ASN
262
n
107
ASN
262
A
PRO
263
n
108
PRO
263
A
GLY
264
n
109
GLY
264
A
LEU
265
n
110
LEU
265
A
GLY
266
n
111
GLY
266
A
ALA
267
n
112
ALA
267
A
PRO
268
n
113
PRO
268
A
VAL
269
n
114
VAL
269
A
PHE
270
n
115
PHE
270
A
HIS
271
n
116
HIS
271
A
MET
272
n
117
MET
272
A
THR
273
n
118
THR
273
A
ASN
274
n
119
ASN
274
A
TYR
275
n
120
TYR
275
A
LEU
276
n
121
LEU
276
A
GLU
277
n
122
GLU
277
A
GLN
278
n
123
GLN
278
A
PRO
279
n
124
PRO
279
A
VAL
280
n
125
VAL
280
A
SER
281
n
126
SER
281
A
ASN
282
n
127
ASN
282
A
ASP
283
n
128
ASP
283
A
LEU
284
n
129
LEU
284
A
SER
285
n
130
SER
285
A
ASN
286
n
131
ASN
286
A
CYS
287
n
132
CYS
287
A
MET
288
n
133
MET
288
A
VAL
289
n
134
VAL
289
A
ALA
290
n
135
ALA
290
A
LEU
291
n
136
LEU
291
A
GLY
292
n
137
GLY
292
A
GLU
293
n
138
GLU
293
A
LEU
294
n
139
LEU
294
A
LYS
295
n
140
LYS
295
A
LEU
296
n
141
LEU
296
A
ALA
297
n
142
ALA
297
A
ALA
298
n
143
ALA
298
A
LEU
299
n
144
LEU
299
A
CYS
300
n
145
CYS
300
A
HIS
301
n
146
HIS
301
A
GLY
302
n
147
GLY
302
A
GLU
303
n
148
GLU
303
A
ASP
304
n
149
ASP
304
A
SER
305
n
150
SER
305
A
ILE
306
n
151
ILE
306
A
THR
307
n
152
THR
307
A
ILE
308
n
153
ILE
308
A
PRO
309
n
154
PRO
309
A
TYR
310
n
155
TYR
310
A
GLN
311
n
156
GLN
311
A
n
157
312
A
n
158
313
A
n
159
314
A
n
160
315
A
GLY
316
n
161
GLY
316
A
VAL
317
n
162
VAL
317
A
SER
318
n
163
SER
318
A
PHE
319
n
164
PHE
319
A
GLN
320
n
165
GLN
320
A
LEU
321
n
166
LEU
321
A
VAL
322
n
167
VAL
322
A
LYS
323
n
168
LYS
323
A
LEU
324
n
169
LEU
324
A
GLY
325
n
170
GLY
325
A
VAL
326
n
171
VAL
326
A
TRP
327
n
172
TRP
327
A
LYS
328
n
173
LYS
328
A
SER
329
n
174
SER
329
A
PRO
330
n
175
PRO
330
A
THR
331
n
176
THR
331
A
ASP
332
n
177
ASP
332
A
MET
333
n
178
MET
333
A
GLN
334
n
179
GLN
334
A
SER
335
n
180
SER
335
A
TRP
336
n
181
TRP
336
A
VAL
337
n
182
VAL
337
A
PRO
338
n
183
PRO
338
A
LEU
339
n
184
LEU
339
A
SER
340
n
185
SER
340
A
THR
341
n
186
THR
341
A
ASP
342
n
187
ASP
342
A
ASP
343
n
188
ASP
343
A
PRO
344
n
189
PRO
344
A
VAL
345
n
190
VAL
345
A
ILE
346
n
191
ILE
346
A
ASP
347
n
192
ASP
347
A
ARG
348
n
193
ARG
348
A
LEU
349
n
194
LEU
349
A
TYR
350
n
195
TYR
350
A
LEU
351
n
196
LEU
351
A
SER
352
n
197
SER
352
A
SER
353
n
198
SER
353
A
HIS
354
n
199
HIS
354
A
ARG
355
n
200
ARG
355
A
GLY
356
n
201
GLY
356
A
VAL
357
n
202
VAL
357
A
ILE
358
n
203
ILE
358
A
ALA
359
n
204
ALA
359
A
ASP
360
n
205
ASP
360
A
ASN
361
n
206
ASN
361
A
GLN
362
n
207
GLN
362
A
ALA
363
n
208
ALA
363
A
LYS
364
n
209
LYS
364
A
TRP
365
n
210
TRP
365
A
ALA
366
n
211
ALA
366
A
VAL
367
n
212
VAL
367
A
PRO
368
n
213
PRO
368
A
THR
369
n
214
THR
369
A
THR
370
n
215
THR
370
A
ARG
371
n
216
ARG
371
A
THR
372
n
217
THR
372
A
ASP
373
n
218
ASP
373
A
ASP
374
n
219
ASP
374
A
LYS
375
n
220
LYS
375
A
LEU
376
n
221
LEU
376
A
ARG
377
n
222
ARG
377
A
MET
378
n
223
MET
378
A
GLU
379
n
224
GLU
379
A
THR
380
n
225
THR
380
A
CYS
381
n
226
CYS
381
A
PHE
382
n
227
PHE
382
A
GLN
383
n
228
GLN
383
A
GLN
384
n
229
GLN
384
A
ALA
385
n
230
ALA
385
A
CYS
386
n
231
CYS
386
A
LYS
387
n
232
LYS
387
A
GLY
388
n
233
GLY
388
A
LYS
389
n
234
LYS
389
A
ILE
390
n
235
ILE
390
A
GLN
391
n
236
GLN
391
A
ALA
392
n
237
ALA
392
A
LEU
393
n
238
LEU
393
A
CYS
394
n
239
CYS
394
A
GLU
395
n
240
GLU
395
A
ASN
396
n
241
ASN
396
A
PRO
397
n
242
PRO
397
A
GLU
398
n
243
GLU
398
A
TRP
399
n
244
TRP
399
A
ALA
400
n
245
ALA
400
A
PRO
401
n
246
PRO
401
A
LEU
402
n
247
LEU
402
A
LYS
403
n
248
LYS
403
A
ASP
404
n
249
ASP
404
A
ASN
405
n
250
ASN
405
A
ARG
406
n
251
ARG
406
A
ILE
407
n
252
ILE
407
A
PRO
408
n
253
PRO
408
A
SER
409
n
254
SER
409
A
TYR
410
n
255
TYR
410
A
GLY
411
n
256
GLY
411
A
VAL
412
n
257
VAL
412
A
LEU
413
n
258
LEU
413
A
SER
414
n
259
SER
414
A
VAL
415
n
260
VAL
415
A
ASP
416
n
261
ASP
416
A
LEU
417
n
262
LEU
417
A
SER
418
n
263
SER
418
A
n
264
419
A
THR
420
n
265
THR
420
A
VAL
421
n
266
VAL
421
A
GLU
422
n
267
GLU
422
A
LEU
423
n
268
LEU
423
A
LYS
424
n
269
LYS
424
A
ILE
425
n
270
ILE
425
A
LYS
426
n
271
LYS
426
A
ILE
427
n
272
ILE
427
A
ALA
428
n
273
ALA
428
A
SER
429
n
274
SER
429
A
GLY
430
n
275
GLY
430
A
PHE
431
n
276
PHE
431
A
GLY
432
n
277
GLY
432
A
PRO
433
n
278
PRO
433
A
LEU
434
n
279
LEU
434
A
ILE
435
n
280
ILE
435
A
THR
436
n
281
THR
436
A
HIS
437
n
282
HIS
437
A
GLY
438
n
283
GLY
438
A
SER
439
n
284
SER
439
A
GLY
440
n
285
GLY
440
A
MET
441
n
286
MET
441
A
ASP
442
n
287
ASP
442
A
LEU
443
n
288
LEU
443
A
TYR
444
n
289
TYR
444
A
LYS
445
n
290
LYS
445
A
SER
446
n
291
SER
446
A
ASN
447
n
292
ASN
447
A
HIS
448
n
293
HIS
448
A
ASN
449
n
294
ASN
449
A
ASN
450
n
295
ASN
450
A
VAL
451
n
296
VAL
451
A
TYR
452
n
297
TYR
452
A
TRP
453
n
298
TRP
453
A
LEU
454
n
299
LEU
454
A
THR
455
n
300
THR
455
A
ILE
456
n
301
ILE
456
A
PRO
457
n
302
PRO
457
A
PRO
458
n
303
PRO
458
A
MET
459
n
304
MET
459
A
LYS
460
n
305
LYS
460
A
ASN
461
n
306
ASN
461
A
LEU
462
n
307
LEU
462
A
ALA
463
n
308
ALA
463
A
LEU
464
n
309
LEU
464
A
GLY
465
n
310
GLY
465
A
VAL
466
n
311
VAL
466
A
ILE
467
n
312
ILE
467
A
ASN
468
n
313
ASN
468
A
THR
469
n
314
THR
469
A
LEU
470
n
315
LEU
470
A
GLU
471
n
316
GLU
471
A
TRP
472
n
317
TRP
472
A
ILE
473
n
318
ILE
473
A
PRO
474
n
319
PRO
474
A
ARG
475
n
320
ARG
475
A
PHE
476
n
321
PHE
476
A
LYS
477
n
322
LYS
477
A
VAL
478
n
323
VAL
478
A
SER
479
n
324
SER
479
A
PRO
480
n
325
PRO
480
A
TYR
481
n
326
TYR
481
A
LEU
482
n
327
LEU
482
A
PHE
483
n
328
PHE
483
A
THR
484
n
329
THR
484
A
VAL
485
n
330
VAL
485
A
PRO
486
n
331
PRO
486
A
ILE
487
n
332
ILE
487
A
LYS
488
n
333
LYS
488
A
GLU
489
n
334
GLU
489
A
ALA
490
n
335
ALA
490
A
GLY
491
n
336
GLY
491
A
GLY
492
n
337
GLU
492
A
ASP
493
n
338
ASP
493
A
CYS
494
n
339
CYS
494
A
HIS
495
n
340
HIS
495
A
ALA
496
n
341
ALA
496
A
PRO
497
n
342
PRO
497
A
THR
498
n
343
THR
498
A
TYR
499
n
344
TYR
499
A
ALA
500
n
345
LEU
500
A
n
346
501
A
n
347
502
A
n
348
503
A
n
349
504
A
ASP
505
n
350
ASP
505
A
GLY
506
n
351
GLY
506
A
ASP
507
n
352
ASP
507
A
VAL
508
n
353
VAL
508
A
LYS
509
n
354
LYS
509
A
LEU
510
n
355
LEU
510
A
SER
511
n
356
SER
511
A
SER
512
n
357
SER
512
A
ASN
513
n
358
ASN
513
A
LEU
514
n
359
LEU
514
A
VAL
515
n
360
VAL
515
A
ILE
516
n
361
ILE
516
A
LEU
517
n
362
LEU
517
A
PRO
518
n
363
PRO
518
A
GLY
519
n
364
GLY
519
A
GLN
520
n
365
GLN
520
A
ASP
521
n
366
ASP
521
A
LEU
522
n
367
LEU
522
A
GLN
523
n
368
GLN
523
A
TYR
524
n
369
TYR
524
A
VAL
525
n
370
VAL
525
A
LEU
526
n
371
LEU
526
A
ALA
527
n
372
ALA
527
A
THR
528
n
373
THR
528
A
TYR
529
n
374
TYR
529
A
ASP
530
n
375
ASP
530
A
THR
531
n
376
THR
531
A
SER
532
n
377
SER
532
A
ARG
533
n
378
ARG
533
A
VAL
534
n
379
VAL
534
A
GLU
535
n
380
GLU
535
A
n
381
536
A
ALA
537
n
382
ALA
537
A
VAL
538
n
383
VAL
538
A
VAL
539
n
384
VAL
539
A
TYR
540
n
385
TYR
540
A
TYR
541
n
386
TYR
541
A
VAL
542
n
387
VAL
542
A
TYR
543
n
388
TYR
543
A
SER
544
n
389
SER
544
A
PRO
545
n
390
PRO
545
A
SER
546
n
391
SER
546
A
ARG
547
n
392
ARG
547
A
SER
548
n
393
SER
548
A
PHE
549
n
394
PHE
549
A
SER
550
n
395
SER
550
A
TYR
551
n
396
TYR
551
A
PHE
552
n
397
PHE
552
A
TYR
553
n
398
TYR
553
A
PRO
554
n
399
PRO
554
A
PHE
555
n
400
PHE
555
A
ARG
556
n
401
ARG
556
A
ALA
557
n
402
LEU
557
A
PRO
558
n
403
PRO
558
A
ILE
559
n
404
ILE
559
A
LYS
560
n
405
LYS
560
A
GLY
561
n
406
GLY
561
A
VAL
562
n
407
VAL
562
A
PRO
563
n
408
PRO
563
A
ILE
564
n
409
ILE
564
A
GLU
565
n
410
GLU
565
A
LEU
566
n
411
LEU
566
A
GLN
567
n
412
GLN
567
A
VAL
568
n
413
VAL
568
A
GLU
569
n
414
GLU
569
A
CYS
570
n
415
CYS
570
A
PHE
571
n
416
PHE
571
A
THR
572
n
417
THR
572
A
TRP
573
n
418
TRP
573
A
ASP
574
n
419
ASP
574
A
GLN
575
n
420
GLN
575
A
LYS
576
n
421
LYS
576
A
LEU
577
n
422
LEU
577
A
TRP
578
n
423
TRP
578
A
CYS
579
n
424
CYS
579
A
ARG
580
n
425
ARG
580
A
HIS
581
n
426
HIS
581
A
PHE
582
n
427
PHE
582
A
CYS
583
n
428
CYS
583
A
VAL
584
n
429
VAL
584
A
LEU
585
n
430
LEU
585
A
ALA
586
n
431
ALA
586
A
ASP
587
n
432
ASP
587
A
SER
588
n
433
SER
588
A
GLU
589
n
434
GLU
589
A
SER
590
n
435
SER
590
A
GLY
591
n
436
GLY
591
A
GLY
592
n
437
GLY
592
A
HIS
593
n
438
HIS
593
A
ILE
594
n
439
ILE
594
A
THR
595
n
440
THR
595
A
HIS
596
n
441
HIS
596
A
SER
597
n
442
SER
597
A
GLY
598
n
443
GLY
598
A
MET
599
n
444
MET
599
A
VAL
600
n
445
VAL
600
A
GLY
601
n
446
GLY
601
A
MET
602
n
447
MET
602
A
GLY
603
n
448
GLY
603
A
VAL
604
n
449
VAL
604
A
SER
605
n
450
SER
605
A
CYS
606
n
451
CYS
606
A
n
452
607
A
n
453
608
A
n
454
609
A
n
455
610
A
n
456
611
A
n
457
612
A
n
458
613
A
n
459
614
A
n
460
615
A
n
461
616
A
n
462
617
A
author_defined_assembly
1
monomeric
A
ASN
200
GLYCOSYLATION SITE
A
ASN
45
ASN
A
ASN
215
GLYCOSYLATION SITE
A
ASN
60
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
193
A
N
THR
38
A
O
SER
605
A
O
SER
450
A
O
VAL
600
A
O
VAL
445
A
N
CYS
579
A
N
CYS
424
A
O
VAL
584
A
O
VAL
429
A
N
GLU
565
A
N
GLU
410
A
N
SER
217
A
N
SER
62
A
O
LEU
233
A
O
LEU
78
A
N
TYR
232
A
N
TYR
77
A
O
VAL
254
A
O
VAL
99
A
N
ARG
253
A
N
ARG
98
A
O
GLN
278
A
O
GLN
123
A
N
ILE
306
A
N
ILE
151
A
O
LEU
349
A
O
LEU
194
A
N
ASP
347
A
N
ASP
192
A
O
THR
370
A
O
THR
215
A
O
LYS
364
A
O
LYS
209
A
N
VAL
357
A
N
VAL
202
A
O
GLY
356
A
O
GLY
201
A
N
VAL
289
A
N
VAL
134
A
N
MET
288
A
N
MET
133
A
O
LEU
299
A
O
LEU
144
A
N
LEU
296
A
N
LEU
141
A
O
LEU
324
A
O
LEU
169
A
N
LEU
321
A
N
LEU
166
A
O
SER
335
A
O
SER
180
A
N
ILE
306
A
N
ILE
151
A
O
LEU
349
A
O
LEU
194
A
N
ASP
347
A
N
ASP
192
A
O
THR
370
A
O
THR
215
A
N
THR
369
A
N
THR
214
A
O
SER
409
A
O
SER
254
A
N
VAL
412
A
N
VAL
257
A
O
ALA
428
A
O
ALA
273
A
N
TYR
444
A
N
TYR
289
A
O
TRP
453
A
O
TRP
298
A
N
LEU
454
A
N
LEU
299
A
O
ASN
468
A
O
ASN
313
A
N
THR
469
A
N
THR
314
A
O
SER
479
A
O
SER
324
A
N
VAL
485
A
N
VAL
330
A
O
ALA
496
A
O
ALA
341
A
N
LEU
510
A
N
LEU
355
A
O
TYR
529
A
O
TYR
374
A
O
VAL
525
A
O
VAL
370
A
N
VAL
515
A
N
VAL
360
A
N
LEU
510
A
N
LEU
355
A
O
TYR
529
A
O
TYR
374
A
N
LEU
526
A
N
LEU
371
A
O
TYR
541
A
O
TYR
386
A
N
TYR
540
A
N
TYR
385
A
O
TYR
551
A
O
TYR
396
1
A
CB
GLU
492
A
CB
GLU
337
1
Y
1
A
CG
GLU
492
A
CG
GLU
337
1
Y
1
A
CD
GLU
492
A
CD
GLU
337
1
Y
1
A
OE1
GLU
492
A
OE1
GLU
337
1
Y
1
A
OE2
GLU
492
A
OE2
GLU
337
1
Y
1
A
CG
LEU
500
A
CG
LEU
345
1
Y
1
A
CD1
LEU
500
A
CD1
LEU
345
1
Y
1
A
CD2
LEU
500
A
CD2
LEU
345
1
Y
1
A
CG
LEU
557
A
CG
LEU
402
1
Y
1
A
CD1
LEU
557
A
CD1
LEU
402
1
Y
1
A
CD2
LEU
557
A
CD2
LEU
402
1
Y
1
A
ASP
156
A
ASP
1
1
Y
1
A
VAL
157
A
VAL
2
1
Y
1
A
ALA
158
A
ALA
3
1
Y
1
A
ALA
159
A
ALA
4
1
Y
1
A
GLU
160
A
GLU
5
1
Y
1
A
GLU
161
A
GLU
6
1
Y
1
A
LEU
162
A
LEU
7
1
Y
1
A
MET
163
A
MET
8
1
Y
1
A
ASN
164
A
ASN
9
1
Y
1
A
ALA
165
A
ALA
10
1
Y
1
A
LEU
166
A
LEU
11
1
Y
1
A
VAL
167
A
VAL
12
1
Y
1
A
ASN
168
A
ASN
13
1
Y
1
A
SER
169
A
SER
14
1
Y
1
A
THR
170
A
THR
15
1
Y
1
A
LEU
171
A
LEU
16
1
Y
1
A
LEU
172
A
LEU
17
1
Y
1
A
GLU
173
A
GLU
18
1
Y
1
A
THR
174
A
THR
19
1
Y
1
A
ARG
175
A
ARG
20
1
Y
1
A
THR
176
A
THR
21
1
Y
1
A
THR
177
A
THR
22
1
Y
1
A
ASN
178
A
ASN
23
1
Y
1
A
GLN
179
A
GLN
24
1
Y
1
A
PHE
180
A
PHE
25
1
Y
1
A
LEU
181
A
LEU
26
1
Y
1
A
ALA
182
A
ALA
27
1
Y
1
A
VAL
183
A
VAL
28
1
Y
1
A
SER
184
A
SER
29
1
Y
1
A
LYS
185
A
LYS
30
1
Y
1
A
GLY
186
A
GLY
31
1
Y
1
A
ASN
187
A
ASN
32
1
Y
1
A
CYS
188
A
CYS
33
1
Y
1
A
LEU
239
A
LEU
84
1
Y
1
A
SER
240
A
SER
85
1
Y
1
A
SER
241
A
SER
86
1
Y
1
A
LYS
242
A
LYS
87
1
Y
1
A
ARG
243
A
ARG
88
1
Y
1
A
SER
244
A
SER
89
1
Y
1
A
GLU
245
A
GLU
90
1
Y
1
A
LEU
246
A
LEU
91
1
Y
1
A
SER
247
A
SER
92
1
Y
1
A
GLY
312
A
GLY
157
1
Y
1
A
SER
313
A
SER
158
1
Y
1
A
GLY
314
A
GLY
159
1
Y
1
A
LYS
315
A
LYS
160
1
Y
1
A
LEU
419
A
LEU
264
1
Y
1
A
PRO
501
A
PRO
346
1
Y
1
A
ALA
502
A
ALA
347
1
Y
1
A
GLU
503
A
GLU
348
1
Y
1
A
VAL
504
A
VAL
349
1
Y
1
A
HIS
536
A
HIS
381
1
Y
1
A
THR
607
A
THR
452
1
Y
1
A
VAL
608
A
VAL
453
1
Y
1
A
THR
609
A
THR
454
1
Y
1
A
ARG
610
A
ARG
455
1
Y
1
A
GLU
611
A
GLU
456
1
Y
1
A
ASP
612
A
ASP
457
1
Y
1
A
GLY
613
A
GLY
458
1
Y
1
A
THR
614
A
THR
459
1
Y
1
A
ASN
615
A
ASN
460
1
Y
1
A
ARG
616
A
ARG
461
1
Y
1
A
ARG
617
A
ARG
462
1
Y
1
A
A
CE2
O
TYR
PHE
553
555
2.18
1
A
A
TRP
ALA
399
400
-144.67
1
10.45
1.10
114.20
124.65
A
A
A
CA
CB
SG
CYS
CYS
CYS
300
300
300
N
1
-10.61
1.50
110.10
99.49
A
A
A
CB
CA
C
ALA
ALA
ALA
392
392
392
N
1
-13.03
2.10
111.70
98.67
A
A
A
CB
CA
C
PRO
PRO
PRO
480
480
480
N
1
A
GLN
225
57.65
-131.09
1
A
PRO
263
-76.59
24.51
1
A
SER
285
-163.93
116.94
1
A
SER
352
-125.79
-73.03
1
A
ALA
392
76.65
-9.75
1
A
LEU
423
-46.52
152.71
1
A
SER
446
-117.31
-167.02
1
A
ASN
461
56.33
12.42
1
A
TYR
481
-120.83
-55.10
1
A
GLU
492
86.76
150.88
1
A
THR
531
-64.18
87.91
1
A
VAL
534
-140.43
-2.56
1
A
PHE
555
-69.98
90.03
0.2514
0.2221
2.70
40
1279
25810
25665
5
99.4
Random
1
THROUGHOUT
0
0
SIRAS
Engh & Huber
2.70
40
66
3203
28
0
3109
0.007
1.452
58.7
0.05
2.7
40
2RKC
48443
25665
2.0
2.0
0.083
1
15.0
4.6
98.8
0.538
2.70
2.85
2.9
7174
0.538
1
4.6
99.9
data collection
HKL-2000
phasing
SHARP
refinement
CNS
data reduction
MOSFLM
data scaling
SCALA
Crystal structure of the measles virus hemagglutinin
1
N
N
2
N
N
2
N
N
3
N
N
A
SER
204
A
SER
49
HELX_P
A
ARG
212
A
ARG
57
1
1
9
A
ASP
373
A
ASP
218
HELX_P
A
CYS
386
A
CYS
231
1
2
14
A
TRP
399
A
TRP
244
HELX_P
A
ASP
404
A
ASP
249
1
3
6
disulf
2.025
A
CYS
287
A
SG
CYS
132
1_555
A
CYS
300
A
SG
CYS
145
1_555
disulf
2.036
A
CYS
381
A
SG
CYS
226
1_555
A
CYS
494
A
SG
CYS
339
1_555
disulf
2.027
A
CYS
386
A
SG
CYS
231
1_555
A
CYS
394
A
SG
CYS
239
1_555
disulf
2.039
A
CYS
570
A
SG
CYS
415
1_555
A
CYS
579
A
SG
CYS
424
1_555
covale
1.454
one
N-Glycosylation
A
ASN
200
A
ND2
ASN
45
1_555
A
NAG
618
B
C1
NAG
1_555
covale
1.453
one
N-Glycosylation
A
ASN
215
A
ND2
ASN
60
1_555
A
NAG
619
C
C1
NAG
1_555
VIRAL PROTEIN
hemagglutinin, measles virus, Envelope protein, Membrane, Transmembrane, Virion, VIRAL PROTEIN
A
ILE
473
A
ILE
318
1
A
PRO
474
A
PRO
319
-0.37
Q83531_9PARA
UNP
1
156
Q83531
DVAAEELMNALVNSTLLETRTTNQFLAVSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVE
KPNLSSKRSELSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGK
GVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKGKIQALCE
NPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPR
FKVSPYLFTVPIKEAGEDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPF
RLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCTVTREDGTNRR
156
617
2RKC
156
617
Q83531
A
1
1
462
1
ASN
engineered mutation
ILE
238
2RKC
A
Q83531
UNP
238
83
4
4
8
5
4
2
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
193
A
THR
38
A
PHE
198
A
PHE
43
A
HIS
593
A
HIS
438
A
SER
605
A
SER
450
A
LYS
576
A
LYS
421
A
ALA
586
A
ALA
431
A
VAL
562
A
VAL
407
A
TRP
573
A
TRP
418
A
ASN
215
A
ASN
60
A
SER
224
A
SER
69
A
MET
227
A
MET
72
A
LYS
236
A
LYS
81
A
SER
250
A
SER
95
A
ARG
261
A
ARG
106
A
VAL
269
A
VAL
114
A
VAL
280
A
VAL
125
A
SER
305
A
SER
150
A
THR
307
A
THR
152
A
ILE
346
A
ILE
191
A
TYR
350
A
TYR
195
A
GLN
362
A
GLN
207
A
ARG
371
A
ARG
216
A
ARG
355
A
ARG
200
A
ILE
358
A
ILE
203
A
ASN
286
A
ASN
131
A
GLY
292
A
GLY
137
A
LYS
295
A
LYS
140
A
HIS
301
A
HIS
146
A
SER
318
A
SER
163
A
GLY
325
A
GLY
170
A
MET
333
A
MET
178
A
PRO
338
A
PRO
183
A
SER
305
A
SER
150
A
THR
307
A
THR
152
A
ILE
346
A
ILE
191
A
TYR
350
A
TYR
195
A
GLN
362
A
GLN
207
A
ARG
371
A
ARG
216
A
SER
409
A
SER
254
A
ASP
416
A
ASP
261
A
LYS
426
A
LYS
271
A
GLY
430
A
GLY
275
A
ASP
442
A
ASP
287
A
LYS
445
A
LYS
290
A
VAL
451
A
VAL
296
A
ILE
456
A
ILE
301
A
VAL
466
A
VAL
311
A
GLU
471
A
GLU
316
A
LYS
477
A
LYS
322
A
LEU
482
A
LEU
327
A
THR
484
A
THR
329
A
PRO
486
A
PRO
331
A
HIS
495
A
HIS
340
A
PRO
497
A
PRO
342
A
LYS
509
A
LYS
354
A
SER
511
A
SER
356
A
TYR
524
A
TYR
369
A
ASP
530
A
ASP
375
A
VAL
515
A
VAL
360
A
ILE
516
A
ILE
361
A
LYS
509
A
LYS
354
A
SER
511
A
SER
356
A
TYR
524
A
TYR
369
A
ASP
530
A
ASP
375
A
VAL
538
A
VAL
383
A
TYR
543
A
TYR
388
A
PHE
549
A
PHE
394
A
PHE
552
A
PHE
397
92
P 41 21 2