1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Freitas, M.S. Gaspar, L.P. Lorenzoni, M. Almeida, F.C. Tinoco, L.W. Almeida, M.S. Maia, L.F. Degreve, L. Valente, A.P. Silva, J.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 282 27306 27314 10.1074/jbc.M611864200 17545161 Structure of the Ebola fusion peptide in a membrane-mimetic environment and the interaction with lipid rafts. 2007 10.2210/pdb2rlj/pdb pdb_00002rlj 1574.820 Envelope glycoprotein Ebola fusion peptide 1 man polymer no no GAAIGLAWIPYFGPAA GAAIGLAWIPYFGPAA A polypeptide(L) n n n n n n n n n n n n n n n n Ebola-like viruses Escherichia sample 186538 Zaire ebolavirus 562 Escherichia coli database_2 pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Database references Derived calculations 1 0 2007-08-07 1 1 2011-07-13 1 2 2022-03-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession BMRB Y PDBJ 2007-07-05 REL REL structures with the lowest energy 100 20 2D 1H-1H TOCSY 2D 1H-1H NOESY 400 mM 10 % 15 mM 0.015 7 ambient 298 K simulated annealing 1 lowest energy 400mM SDS, 10% D2O, 15mM potassium phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRDraw Johnson, One Moon Scientific chemical shift assignment NMRView Johnson, One Moon Scientific peak picking NMRView Brunger, Adams, Clore, Gros, Nilges and Read structure solution CNSSOLVE Laskowski and MacArthur data analysis ProcheckNMR Brunger, Adams, Clore, Gros, Nilges and Read refinement CNSSOLVE 600 Bruker AMX Bruker AMX GLY 1 n 1 GLY 1 A ALA 2 n 2 ALA 2 A ALA 3 n 3 ALA 3 A ILE 4 n 4 ILE 4 A GLY 5 n 5 GLY 5 A LEU 6 n 6 LEU 6 A ALA 7 n 7 ALA 7 A TRP 8 n 8 TRP 8 A ILE 9 n 9 ILE 9 A PRO 10 n 10 PRO 10 A TYR 11 n 11 TYR 11 A PHE 12 n 12 PHE 12 A GLY 13 n 13 GLY 13 A PRO 14 n 14 PRO 14 A ALA 15 n 15 ALA 15 A ALA 16 n 16 ALA 16 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ALA 3 -106.40 -70.01 1 A ILE 4 -142.91 -42.27 1 A PRO 10 -39.99 -27.53 1 A ALA 15 -102.93 55.42 3 A ALA 2 61.77 64.34 3 A ALA 3 -172.21 -78.15 3 A LEU 6 -151.54 31.38 3 A ALA 7 -96.71 40.90 3 A PRO 14 -58.62 -71.92 3 A ALA 15 58.77 97.12 4 A LEU 6 -159.07 29.15 5 A ALA 2 -148.14 30.14 5 A ALA 7 -116.58 60.73 5 A ALA 15 -131.64 -81.86 6 A ALA 2 -167.98 -43.13 7 A ALA 3 -177.46 37.98 7 A LEU 6 -106.20 61.37 7 A ALA 15 58.91 74.70 8 A ALA 3 -143.73 35.51 8 A LEU 6 46.82 29.73 9 A ALA 3 -176.15 -71.68 9 A ALA 7 -95.00 41.34 10 A ALA 3 -83.21 -84.05 10 A LEU 6 -155.13 29.74 10 A ALA 7 -97.39 43.94 10 A PRO 10 -39.48 -31.74 10 A ALA 15 -90.68 50.99 11 A LEU 6 -144.74 24.01 12 A ALA 2 -154.46 45.82 12 A PRO 14 -64.02 91.99 13 A ALA 3 -175.65 -45.20 13 A ALA 7 -92.65 48.72 13 A ALA 15 -67.56 -176.90 14 A ALA 3 -126.55 -76.70 14 A ALA 7 -98.95 30.63 14 A ALA 15 58.91 -175.01 15 A ALA 3 -139.80 -45.15 15 A ALA 15 61.85 166.13 16 A LEU 6 -95.25 49.13 16 A PRO 10 -39.91 -28.82 16 A PRO 14 -53.21 88.28 16 A ALA 15 53.63 -167.42 17 A LEU 6 -92.58 49.71 17 A ALA 15 59.50 -173.15 18 A LEU 6 -107.60 62.35 18 A ALA 15 -112.82 69.55 19 A ALA 7 -99.25 39.74 20 A LEU 6 -141.54 26.13 20 A ALA 7 -96.23 47.44 20 A PRO 14 -65.83 -179.78 NMR Structure of Ebola fusion peptide in SDS micelles at pH 7 1 N N A TRP 8 A TRP 8 HELX_P A PHE 12 A PHE 12 5 1 5 VIRAL PROTEIN Fusion Peptide, SDS micelles, Ebola virus, Filovirus, VIRAL PROTEIN VGP_EBOZM UNP 1 524 Q05320 GAAIGLAWIPYFGPAA 524 539 2RLJ 1 16 Q05320 A 1 1 16