1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Ramelot, T.A.
Cort, J.R.
Semesi, A.
Garcia, M.
Yee, A.A.
Arrowsmith, C.H.
Kennedy, M.A.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
To be Published
0353
NMR solution structure of TnpE protein from Shigella flexneri. Northeast
Structural Genomics Target SfR125
10.2210/pdb2rn7/pdb
pdb_00002rn7
12662.289
IS629 orfA
1
man
polymer
no
no
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGGLTTAERQRLKEPEREN
RELRRSNDILRLASAYFAKAEFDRLWKK
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGGLTTAERQRLKEPEREN
RELRRSNDILRLASAYFAKAEFDRLWKK
A
SfR125
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Shigella
Escherichia
sample
tnpE
623
Shigella flexneri
562
Escherichia coli
BL21 DE3 pMGK
plasmid
p15Tv lic
all alpha
Northeast Structural Genomics Consortium
NESG
PSI, Protein Structure Initiative
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Data collection
1
0
2008-01-15
1
1
2011-07-13
1
2
2022-03-16
1
3
2024-05-29
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
Y
BMRB
Y
PDBJ
2007-12-08
REL
REL
THERE ARE CONFLICTS BETWEEN SEQRES(LEU A 92) AND SEQUENCE DATABASE (GLN).
THE AUTHORS BELIEVE THAT THE SEQRES IS CORRECT AND IS
THE TRUE IDENTITY OF THESE RESIDUES AND IS NATURAL MUTANT.
351
9
89
153
109
38
0
0
41
41
structures with the least restraint violations
25
20
0.9
0.08
0.01
2D 1H-15N HSQC
2D 1H-13C HSQC
3D HNCACB
3D CBCA(CO)NH
3D HNCO
3D HBHA(CO)NH
3D C(CO)NH
3D HCCH-TOCSY
3D HCCH-TOCSY
2D 1H-15N HSQC
3D 1H-15N NOESY
3D 1H-13C NOESY aliph
3D 1H-13C NOESY arom
3D HCCH-COSY
2D 1H-13C HSQC
2D 1H-15N HSQC
2D 1H-13C HSQC
1
mM
[U-100% 13C; U-100% 15N]
10
mM
500
mM
10
mM
0.01
mM
0.01
%
1
mM
1
%
1
mM
[U-7% 13C; U-100% 15N]
10
mM
500
mM
10
mM
0.01
mM
0.01
%
1
mM
1
%
.5
7.7
ambient
293
K
Xplor-NIH, CNS
DGSA-distance geometry simulated annealing, water refinement
1
closest to the average
1mM [U-100% 13C; U-100% 15N] TnpE protein, 10mM TRIS, 500mM sodium chloride, 10mM DTT, 0.01mM Zn+2, 0.01% sodium azide, 1mM benzamidine, 1x protease inhibitor cocktail, 90% H2O/10% D2O
90% H2O/10% D2O
1mM [U-7% 13C; U-100% 15N] TnpE protein, 10mM TRIS, 500mM sodium chloride, 10mM DTT, 0.01mM Zn+2, 0.01% sodium azide, 1mM benzamidine, 1x protease inhibitor cocktail, 90% H2O/10% D2O
90% H2O/10% D2O
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
nmrpipe_linux
Varian
collection
VNMR
6.1C
Huang, Tejero, Powers and Montelione
data analysis
AutoStructure
2.1.1
Schwieters, Kuszewski, Tjandra and Clore
structure solution
X-PLOR NIH
2.15.0
Brunger, Adams, Clore, Gros, Nilges and Read
refinement
CNS
1.1
Goddard
data analysis
Sparky
3.1
600
Varian
INOVA
Varian INOVA
750
Varian
INOVA
Varian INOVA
MET
1
n
1
MET
1
A
THR
2
n
2
THR
2
A
LYS
3
n
3
LYS
3
A
ASN
4
n
4
ASN
4
A
THR
5
n
5
THR
5
A
ARG
6
n
6
ARG
6
A
PHE
7
n
7
PHE
7
A
SER
8
n
8
SER
8
A
PRO
9
n
9
PRO
9
A
GLU
10
n
10
GLU
10
A
VAL
11
n
11
VAL
11
A
ARG
12
n
12
ARG
12
A
GLN
13
n
13
GLN
13
A
ARG
14
n
14
ARG
14
A
ALA
15
n
15
ALA
15
A
VAL
16
n
16
VAL
16
A
ARG
17
n
17
ARG
17
A
MET
18
n
18
MET
18
A
VAL
19
n
19
VAL
19
A
LEU
20
n
20
LEU
20
A
GLU
21
n
21
GLU
21
A
SER
22
n
22
SER
22
A
GLN
23
n
23
GLN
23
A
GLY
24
n
24
GLY
24
A
GLU
25
n
25
GLU
25
A
TYR
26
n
26
TYR
26
A
ASP
27
n
27
ASP
27
A
SER
28
n
28
SER
28
A
GLN
29
n
29
GLN
29
A
TRP
30
n
30
TRP
30
A
ALA
31
n
31
ALA
31
A
THR
32
n
32
THR
32
A
ILE
33
n
33
ILE
33
A
CYS
34
n
34
CYS
34
A
SER
35
n
35
SER
35
A
ILE
36
n
36
ILE
36
A
ALA
37
n
37
ALA
37
A
PRO
38
n
38
PRO
38
A
LYS
39
n
39
LYS
39
A
ILE
40
n
40
ILE
40
A
GLY
41
n
41
GLY
41
A
CYS
42
n
42
CYS
42
A
THR
43
n
43
THR
43
A
PRO
44
n
44
PRO
44
A
GLU
45
n
45
GLU
45
A
THR
46
n
46
THR
46
A
LEU
47
n
47
LEU
47
A
ARG
48
n
48
ARG
48
A
VAL
49
n
49
VAL
49
A
TRP
50
n
50
TRP
50
A
VAL
51
n
51
VAL
51
A
ARG
52
n
52
ARG
52
A
GLN
53
n
53
GLN
53
A
HIS
54
n
54
HIS
54
A
GLU
55
n
55
GLU
55
A
ARG
56
n
56
ARG
56
A
ASP
57
n
57
ASP
57
A
THR
58
n
58
THR
58
A
GLY
59
n
59
GLY
59
A
GLY
60
n
60
GLY
60
A
ASP
61
n
61
ASP
61
A
ASP
62
n
62
ASP
62
A
GLY
63
n
63
GLY
63
A
GLY
64
n
64
GLY
64
A
LEU
65
n
65
LEU
65
A
THR
66
n
66
THR
66
A
THR
67
n
67
THR
67
A
ALA
68
n
68
ALA
68
A
GLU
69
n
69
GLU
69
A
ARG
70
n
70
ARG
70
A
GLN
71
n
71
GLN
71
A
ARG
72
n
72
ARG
72
A
LEU
73
n
73
LEU
73
A
LYS
74
n
74
LYS
74
A
GLU
75
n
75
GLU
75
A
PRO
76
n
76
PRO
76
A
GLU
77
n
77
GLU
77
A
ARG
78
n
78
ARG
78
A
GLU
79
n
79
GLU
79
A
ASN
80
n
80
ASN
80
A
ARG
81
n
81
ARG
81
A
GLU
82
n
82
GLU
82
A
LEU
83
n
83
LEU
83
A
ARG
84
n
84
ARG
84
A
ARG
85
n
85
ARG
85
A
SER
86
n
86
SER
86
A
ASN
87
n
87
ASN
87
A
ASP
88
n
88
ASP
88
A
ILE
89
n
89
ILE
89
A
LEU
90
n
90
LEU
90
A
ARG
91
n
91
ARG
91
A
LEU
92
n
92
LEU
92
A
ALA
93
n
93
ALA
93
A
SER
94
n
94
SER
94
A
ALA
95
n
95
ALA
95
A
TYR
96
n
96
TYR
96
A
PHE
97
n
97
PHE
97
A
ALA
98
n
98
ALA
98
A
LYS
99
n
99
LYS
99
A
ALA
100
n
100
ALA
100
A
GLU
101
n
101
GLU
101
A
PHE
102
n
102
PHE
102
A
ASP
103
n
103
ASP
103
A
ARG
104
n
104
ARG
104
A
LEU
105
n
105
LEU
105
A
TRP
106
n
106
TRP
106
A
LYS
107
n
107
LYS
107
A
LYS
108
n
108
LYS
108
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
3
A
A
HG
H
LEU
ALA
92
93
1.31
11
A
A
HG1
OE2
THR
GLU
43
45
1.57
12
A
A
HG2
H
ARG
LEU
91
92
1.34
15
A
A
O
HG1
THR
THR
66
67
1.56
16
A
A
HD1
OE2
HIS
GLU
54
55
1.59
17
A
A
HG
H
LEU
ALA
92
93
1.28
1
A
ARG
85
77.21
131.20
1
A
ASN
87
-79.78
-159.62
1
A
LEU
90
58.20
-168.67
1
A
PHE
97
64.63
115.15
1
A
ARG
104
-149.66
-13.81
2
A
ASP
62
-162.89
104.93
2
A
GLN
71
157.94
-91.58
2
A
ARG
72
178.16
102.64
2
A
LYS
74
-145.12
-44.96
2
A
ASP
88
-84.78
35.02
2
A
ILE
89
72.89
151.00
2
A
LEU
92
-104.14
-80.58
2
A
SER
94
-104.80
-79.22
2
A
PHE
97
72.04
-51.59
2
A
ALA
98
73.99
-51.10
2
A
ASP
103
59.79
78.66
2
A
LYS
107
70.30
168.17
3
A
THR
67
58.62
18.87
3
A
GLU
69
-169.13
-74.98
3
A
GLU
77
-97.59
-78.66
3
A
ARG
78
-141.21
10.88
3
A
GLU
79
50.84
80.83
3
A
LEU
83
69.61
-63.10
3
A
PHE
97
-96.38
-69.01
3
A
ALA
100
75.26
137.11
3
A
ASP
103
70.17
43.53
3
A
ARG
104
73.57
165.49
3
A
TRP
106
-82.29
36.50
3
A
LYS
107
65.38
103.19
4
A
ALA
68
-140.33
-72.68
4
A
GLU
69
59.41
105.09
4
A
GLN
71
64.23
98.23
4
A
ASN
80
-152.56
40.05
4
A
PHE
97
67.84
-79.18
4
A
ALA
98
170.36
-176.22
5
A
ALA
68
58.15
107.20
5
A
GLU
77
-130.72
-155.85
5
A
ARG
78
74.42
170.47
5
A
GLU
79
73.37
-10.45
5
A
ARG
85
67.01
93.74
5
A
ILE
89
65.73
81.43
5
A
ALA
93
-158.77
33.71
5
A
SER
94
-53.69
-74.78
5
A
ALA
100
-129.41
-156.94
6
A
THR
5
-58.35
97.71
6
A
ARG
6
-150.41
-32.99
6
A
PHE
7
63.93
176.08
6
A
ASP
62
73.17
-74.99
6
A
LEU
65
-66.11
96.21
6
A
ARG
70
-86.33
35.50
6
A
LYS
74
-93.74
41.05
6
A
GLU
77
-160.19
-45.54
6
A
ARG
84
68.20
-79.55
6
A
ARG
85
65.93
-178.19
6
A
ALA
95
-173.33
-70.27
6
A
ALA
100
69.81
121.13
6
A
LEU
105
-80.66
38.01
6
A
TRP
106
55.71
82.37
7
A
LYS
3
-116.07
-160.84
7
A
ASP
61
-166.03
-167.62
7
A
ALA
68
-69.84
66.17
7
A
GLN
71
-66.56
97.17
7
A
ARG
81
-94.33
-94.56
7
A
GLU
82
-93.04
-63.59
7
A
ARG
84
73.42
-33.56
7
A
SER
86
-112.09
-168.26
7
A
ASN
87
49.46
-177.42
7
A
LYS
107
-96.92
-65.94
8
A
ASN
4
-177.02
116.91
8
A
LEU
65
69.53
118.93
8
A
ARG
70
58.00
9.17
8
A
LYS
74
-102.03
73.94
8
A
ARG
78
-136.40
-65.79
8
A
LYS
99
-179.00
-23.59
8
A
ASP
103
-77.99
-76.26
8
A
ARG
104
176.16
-16.27
9
A
THR
2
68.30
82.87
9
A
LYS
3
-138.17
-72.13
9
A
ASN
4
-167.01
117.97
9
A
GLU
25
-165.96
-57.32
9
A
THR
67
63.75
82.03
9
A
ALA
68
-172.08
-61.82
9
A
GLU
75
60.63
84.81
9
A
GLU
79
-99.80
-84.45
9
A
ARG
84
-162.07
77.05
9
A
ALA
93
66.90
161.66
9
A
SER
94
64.44
87.36
9
A
TYR
96
-80.58
-82.28
9
A
PHE
97
177.92
138.67
10
A
THR
2
72.94
-48.22
10
A
ASP
62
65.28
67.83
10
A
ARG
70
-151.94
9.70
10
A
ASN
80
70.29
-163.54
10
A
LEU
83
-94.43
-151.83
10
A
ARG
85
-85.33
-88.42
10
A
SER
86
59.79
-178.01
10
A
ASN
87
-153.51
6.50
10
A
LEU
92
70.33
162.65
10
A
ALA
93
-111.31
-168.63
10
A
SER
94
66.35
95.99
10
A
LYS
99
67.12
62.88
10
A
PHE
102
62.73
-68.64
10
A
ASP
103
68.30
-73.66
11
A
THR
2
48.78
-128.45
11
A
LYS
3
55.84
76.22
11
A
THR
5
57.24
-88.95
11
A
ARG
6
177.07
-19.77
11
A
TYR
26
-99.16
-157.74
11
A
THR
66
51.65
-119.44
11
A
LYS
74
-100.06
-67.65
11
A
GLU
77
-87.83
34.82
11
A
LEU
92
-101.80
-64.00
11
A
ALA
93
60.74
92.70
11
A
SER
94
67.85
96.76
12
A
ASN
4
77.06
-0.60
12
A
ARG
6
59.77
-109.73
12
A
THR
67
47.15
71.80
12
A
ARG
70
169.57
-61.54
12
A
GLU
77
-94.10
-62.23
12
A
ARG
85
65.11
89.49
12
A
ASN
87
-106.83
72.43
12
A
SER
94
-108.20
-159.82
12
A
ALA
95
72.55
-54.79
12
A
ALA
100
68.87
96.95
13
A
TYR
26
-109.63
-163.03
13
A
ASP
61
-71.15
-77.91
13
A
LEU
73
-82.08
42.66
13
A
GLU
75
58.03
75.52
13
A
ILE
89
178.70
140.34
13
A
ASP
103
-109.73
-164.78
14
A
THR
5
52.47
82.90
14
A
ALA
68
-84.17
-72.84
14
A
GLU
69
52.23
86.26
14
A
ARG
70
57.09
90.67
14
A
GLU
75
60.00
84.58
14
A
ARG
85
-158.81
-63.53
14
A
ASP
88
-82.13
36.26
14
A
ILE
89
68.36
104.87
14
A
ALA
93
76.62
-4.98
14
A
TYR
96
74.14
111.41
14
A
LEU
105
-80.92
-78.59
15
A
LYS
3
-152.59
-58.87
15
A
ASP
61
-102.66
-165.12
15
A
THR
66
-85.18
49.58
15
A
THR
67
63.16
-8.47
15
A
GLU
69
-101.44
-61.27
15
A
ARG
78
-141.93
-37.15
15
A
GLU
79
-162.78
115.30
15
A
ASN
80
-111.97
-77.06
15
A
ARG
84
68.14
131.33
15
A
ALA
98
-154.72
72.36
15
A
ALA
100
67.05
-65.57
15
A
GLU
101
74.39
110.65
15
A
PHE
102
76.65
155.23
15
A
ASP
103
77.24
157.85
15
A
LYS
107
69.44
111.46
16
A
ARG
6
-116.18
-78.14
16
A
ASP
61
74.95
-28.21
16
A
LYS
74
59.18
91.58
16
A
GLU
75
65.18
87.88
16
A
LEU
90
63.64
78.88
16
A
LEU
92
72.97
-76.98
16
A
ALA
93
-170.47
-71.25
16
A
SER
94
-166.03
-40.25
16
A
TYR
96
-174.38
137.20
17
A
THR
2
75.73
-45.81
17
A
THR
5
-83.63
39.24
17
A
ASP
61
-129.05
-73.41
17
A
ASP
62
54.04
91.96
17
A
GLU
69
-176.73
130.60
17
A
ARG
70
-126.14
-60.59
17
A
LEU
73
-167.03
-65.62
17
A
LYS
74
-94.40
39.50
17
A
GLU
77
65.50
112.53
17
A
SER
86
-52.67
109.26
17
A
LEU
90
-106.57
-108.02
17
A
LEU
92
-158.36
-159.35
17
A
ALA
93
68.00
86.75
18
A
THR
2
45.83
78.42
18
A
PHE
7
-68.16
99.17
18
A
THR
67
64.17
-92.86
18
A
ALA
68
167.10
-70.82
18
A
GLU
75
67.01
113.72
18
A
ARG
78
-107.93
-72.46
18
A
GLU
79
-169.52
29.00
18
A
LEU
83
-102.80
-160.62
18
A
ASN
87
59.91
-156.01
18
A
LEU
92
-104.77
-168.91
18
A
ALA
93
67.44
-85.15
18
A
ALA
95
-135.36
-70.74
18
A
LYS
99
72.59
-46.07
18
A
ASP
103
67.95
-165.94
18
A
ARG
104
68.10
70.43
19
A
ASP
62
-122.26
-161.67
19
A
THR
67
-133.62
-87.84
19
A
ALA
68
-146.20
13.65
19
A
GLU
75
63.04
86.63
19
A
LEU
83
47.67
-103.39
19
A
ASN
87
64.32
-89.32
19
A
ASP
88
-125.14
-166.25
19
A
ALA
93
71.63
154.68
19
A
ALA
95
71.01
-54.50
19
A
TYR
96
57.81
-143.83
19
A
ARG
104
72.00
-38.38
19
A
LEU
105
74.67
-78.70
20
A
GLN
71
-175.64
89.07
20
A
GLU
75
-158.69
82.77
20
A
ARG
78
-151.74
-2.27
20
A
LEU
83
-132.78
-61.02
20
A
LEU
90
63.15
75.89
20
A
TYR
96
-168.70
-61.41
20
A
PHE
97
56.17
83.28
all alpha
NMR solution structure of TnpE protein from Shigella flexneri. Northeast Structural Genomics Target SfR125
1
N
N
A
SER
8
A
SER
8
HELX_P
A
TYR
26
A
TYR
26
1
1
19
A
SER
28
A
SER
28
HELX_P
A
GLY
41
A
GLY
41
1
2
14
A
THR
43
A
THR
43
HELX_P
A
ARG
56
A
ARG
56
1
3
14
UNKNOWN FUNCTION
helix, all alpha, UNKNOWN FUNCTION, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG
Q7UDG6_SHIFL
UNP
1
1
Q7UDG6
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGGLTTAERQRLKEPEREN
RELRRSNDILRQASAYFAKAEFDRLWKK
1
108
2RN7
1
108
Q7UDG6
A
1
1
108
1
GLN
SEE REMARK 999
LEU
92
2RN7
A
Q7UDG6
UNP
92
92