1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Mashima, T.
Nishikawa, F.
Kamatari, Y.O.
Fujiwara, H.
Nishikawa, S.
Kuwata, K.
Katahira, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
41
1355
1362
10.1093/nar/gks1132
23180780
Anti-prion activity of an RNA aptamer and its structural basis
2013
10.2210/pdb2rsk/pdb
pdb_00002rsk
4033.512
RNA (5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3')
2
syn
polymer
1387.562
partial binding peptide of Major prion protein
2
syn
polymer
no
no
GGAGGAGGAGGA
GGAGGAGGAGGA
A,B
polyribonucleotide
no
no
GQWNKPSKPKTN
GQWNKPSKPKTN
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
7.242
3
6
A
11
A
2
-95.726
A_G11:G2_A
1
-9.858
0.182
0.151
3.461
-7.480
3
6
A
4
A
1
81.218
A_G4:G1_A
2
7.119
-0.720
0.024
-4.021
6.878
3
6
B
13
B
16
-83.303
B_G13:G16_B
3
-7.143
0.683
0.020
3.958
-6.740
3
6
B
14
B
23
95.831
B_G14:G23_B
4
9.004
-0.227
-0.059
-3.437
-2.550
57.387
A
A
11
4
-0.704
A
A
2
1
-2.575
-0.675
0.012
-2.166
AA_G11G4:G1G2_AA
1
-2.893
3.014
57.316
-2.284
0.111
-0.001
179.643
A
B
4
13
-64.591
A
B
1
16
-0.117
-129.174
-0.614
-3.025
AB_G4G13:G16G1_BA
2
117.111
-58.559
172.734
-1.514
0.306
2.605
-57.138
B
B
13
14
0.702
B
B
16
23
2.584
-0.671
-0.017
2.224
BB_G13G14:G23G16_BB
3
3.253
3.403
-57.050
-2.296
0.124
database_2
pdbx_database_status
pdbx_nmr_software
struct_ref_seq
repository
Initial release
Data collection
Database references
Other
1
0
2013-02-13
1
1
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
BMRB
Y
PDBJ
2012-03-08
REL
REL
REL
REL
synthetic peptide
9913
Bovine
Bos taurus
sample
structures with the lowest energy
100
10
1
2D 1H-1H NOESY
2D 1H-1H NOESY
2D 1H-1H NOESY
2D 1H-1H NOESY
2D 1H-1H TOCSY
2D 1H-1H TOCSY
2D DQF-COSY
2D DQF-COSY
2D 1H-13C HSQC
JRHMBC
1
mM
1
mM
10
mM
10
mM
0.01
mM
3
mM
1
mM
1
mM
10
mM
10
mM
0.01
mM
3
mM
10
6.2
ambient
278
K
10
6.2
ambient
303
K
simulated annealing
1
lowest energy
1mM RNA-1, 1mM P16-2, 10mM potassium phosphate-3, 10mM potassium chloride-4, 0.01mM DSS-5, 3mM sodium azide-6, 95% H2O/5% D2O
95% H2O/5% D2O
1mM RNA-7, 1mM P16-8, 10mM potassium phosphate-9, 10mM potassium chloride-10, 0.01mM DSS-11, 3mM sodium azide-12, 100% D2O
100% D2O
Schwieters, Kuszewski, Tjandra and Clore
refinement
X-PLOR NIH
2.26
Bruker Biospin
collection
XwinNMR
Bruker Biospin
collection
TopSpin
Goddard
chemical shift assignment
Sparky
Goddard
peak picking
Sparky
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Cornilescu, Delaglio and Bax
data analysis
TALOS
600
Bruker
DRX
Bruker DRX
G
1
n
1
G
1
A
G
2
n
2
G
2
A
A
3
n
3
A
3
A
G
4
n
4
G
4
A
G
5
n
5
G
5
A
A
6
n
6
A
6
A
G
7
n
7
G
7
A
G
8
n
8
G
8
A
A
9
n
9
A
9
A
G
10
n
10
G
10
A
G
11
n
11
G
11
A
A
12
n
12
A
12
A
G
13
n
1
G
13
B
G
14
n
2
G
14
B
A
15
n
3
A
15
B
G
16
n
4
G
16
B
G
17
n
5
G
17
B
A
18
n
6
A
18
B
G
19
n
7
G
19
B
G
20
n
8
G
20
B
A
21
n
9
A
21
B
G
22
n
10
G
22
B
G
23
n
11
G
23
B
A
24
n
12
A
24
B
GLY
25
n
1
GLY
25
C
GLN
26
n
2
GLN
26
C
TRP
27
n
3
TRP
27
C
ASN
28
n
4
ASN
28
C
LYS
29
n
5
LYS
29
C
PRO
30
n
6
PRO
30
C
SER
31
n
7
SER
31
C
LYS
32
n
8
LYS
32
C
PRO
33
n
9
PRO
33
C
LYS
34
n
10
LYS
34
C
THR
35
n
11
THR
35
C
ASN
36
n
12
ASN
36
C
GLY
37
n
1
GLY
37
D
GLN
38
n
2
GLN
38
D
TRP
39
n
3
TRP
39
D
ASN
40
n
4
ASN
40
D
LYS
41
n
5
LYS
41
D
PRO
42
n
6
PRO
42
D
SER
43
n
7
SER
43
D
LYS
44
n
8
LYS
44
D
PRO
45
n
9
PRO
45
D
LYS
46
n
10
LYS
46
D
THR
47
n
11
THR
47
D
ASN
48
n
12
ASN
48
D
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
D
D
HZ1
HD21
LYS
ASN
44
48
1.19
1
D
D
HB2
HE1
GLN
TRP
38
39
1.22
1
C
C
HB2
HE1
GLN
TRP
26
27
1.23
1
B
B
HO2'
OP2
G
G
19
20
1.28
1
B
B
H22
O2'
G
G
17
19
1.37
1
A
A
H22
O2'
G
G
5
7
1.38
1
B
B
HO2'
O5'
G
G
22
23
1.42
1
A
B
H62
O3'
A
A
6
24
1.43
1
A
A
H1
N7
G
G
8
11
1.44
1
B
B
H1
N7
G
G
20
23
1.44
1
B
B
HO5'
OP1
G
G
13
14
1.45
1
B
B
N3
H1'
G
A
23
24
1.47
1
A
A
N3
H1'
G
A
11
12
1.48
1
A
A
HO2'
O5'
G
G
10
11
1.48
1
A
A
O2'
H8
A
G
6
7
1.48
1
A
A
H22
N7
G
A
1
3
1.48
1
B
B
O2'
H8
A
G
18
19
1.49
1
B
B
H22
N7
G
A
13
15
1.50
1
B
B
O4'
H61
G
A
13
15
1.51
1
A
B
O3'
H62
A
A
12
18
1.52
1
A
B
N3
HO2'
G
A
10
18
1.52
1
A
A
N3
H62
G
A
7
9
1.52
1
A
A
O4'
H61
G
A
1
3
1.52
1
A
B
HO2'
N3
A
G
6
22
1.53
1
A
B
O4'
H1'
G
G
1
16
1.54
1
B
B
N3
H62
G
A
19
21
1.56
1
B
B
N7
H21
G
G
14
23
1.58
1
A
A
N7
H21
G
G
2
11
1.59
1
A
A
O6
O6
G
G
8
11
1.98
1
B
B
O6
O6
G
G
20
23
1.99
1
C
C
O
N
LYS
SER
29
31
2.11
1
D
D
O
N
LYS
SER
41
43
2.11
1
A
C
O6
NE1
G
TRP
11
27
2.15
1
A
A
O6
O6
G
G
2
11
2.15
1
B
D
N7
O
G
GLN
17
38
2.16
1
B
B
O6
O6
G
G
14
23
2.16
1
B
D
O6
NE1
G
TRP
23
39
2.16
1
A
C
N7
O
G
GLN
5
26
2.17
1
A
A
O6
O6
G
G
4
7
2.18
2
A
A
HO2'
O4'
G
A
11
12
1.08
2
D
D
HB2
HE1
GLN
TRP
38
39
1.22
2
C
C
HB2
HE1
GLN
TRP
26
27
1.23
2
A
A
H21
HO2'
G
A
4
6
1.25
2
A
A
H22
O2'
G
G
5
7
1.41
2
A
B
H62
O3'
A
A
6
24
1.42
2
A
A
O2'
H8
A
G
6
7
1.44
2
B
B
H22
O2'
G
G
17
19
1.44
2
B
B
H1
N7
G
G
20
23
1.45
2
A
A
H1
N7
G
G
8
11
1.45
2
B
B
N3
H1'
G
A
23
24
1.47
2
A
A
N3
H1'
G
A
11
12
1.47
2
A
A
N3
H62
G
A
7
9
1.50
2
B
B
O2'
H8
A
G
18
19
1.51
2
A
B
N3
HO2'
G
A
10
18
1.51
2
B
B
N3
H62
G
A
19
21
1.52
2
B
B
H22
N7
G
A
13
15
1.52
2
A
A
H22
N7
G
A
1
3
1.53
2
A
B
H1'
O4'
G
G
4
13
1.56
2
A
A
O4'
H61
G
A
1
3
1.56
2
A
A
N7
H21
G
G
2
11
1.57
2
B
B
O4'
H61
G
A
13
15
1.60
2
A
A
O2'
O4'
G
A
11
12
1.78
2
A
A
O6
O6
G
G
8
11
1.99
2
B
B
O6
O6
G
G
20
23
1.99
2
C
C
O
N
LYS
SER
29
31
2.11
2
D
D
O
N
LYS
SER
41
43
2.12
2
A
C
N7
O
G
GLN
5
26
2.15
2
B
D
N7
O
G
GLN
17
38
2.15
2
A
B
O2'
N3
A
G
6
22
2.15
2
B
D
O6
NE1
G
TRP
23
39
2.16
2
A
C
O6
NE1
G
TRP
11
27
2.16
2
B
B
O6
O6
G
G
16
19
2.16
2
A
A
O6
O6
G
G
2
11
2.16
2
B
B
O6
O6
G
G
14
23
2.16
2
A
A
O6
O6
G
G
4
7
2.17
2
B
D
O5'
OXT
G
ASN
22
48
2.19
2
A
B
O6
O6
G
G
7
19
2.19
3
C
C
HB2
HE1
GLN
TRP
26
27
1.23
3
D
D
HB2
HE1
GLN
TRP
38
39
1.24
3
D
D
HZ1
HD21
LYS
ASN
44
48
1.26
3
B
D
HO2'
HZ2
G
LYS
20
46
1.31
3
A
A
HO2'
OP2
G
A
2
3
1.31
3
A
B
H62
O3'
A
A
6
24
1.32
3
C
C
HZ2
HD21
LYS
ASN
34
36
1.32
3
B
B
O2'
H8
A
G
18
19
1.41
3
A
A
H22
O2'
G
G
5
7
1.42
3
B
B
H1
N7
G
G
20
23
1.45
3
A
A
H1
N7
G
G
8
11
1.45
3
A
B
H1'
O4'
G
G
4
13
1.45
3
A
B
O3'
H62
A
A
12
18
1.45
3
A
A
N3
H1'
G
A
11
12
1.47
3
B
B
H22
O2'
G
G
17
19
1.49
3
A
A
N3
H62
G
A
7
9
1.49
3
A
A
H22
N7
G
A
1
3
1.51
3
B
B
N3
H1'
G
A
23
24
1.51
3
A
B
O4'
H1'
G
G
1
16
1.51
3
B
B
H4'
OP1
G
A
14
15
1.56
3
B
B
H1'
OP2
G
G
13
14
1.56
3
A
A
O4'
H61
G
A
1
3
1.57
3
B
B
N3
H62
G
A
19
21
1.57
3
B
B
H21
N7
G
G
19
22
1.59
3
B
B
N7
H21
G
G
14
23
1.59
3
A
B
O2'
N3
A
G
6
22
1.93
3
B
B
O6
O6
G
G
20
23
1.99
3
A
A
O6
O6
G
G
8
11
1.99
3
A
B
N3
O2'
G
A
10
18
2.08
3
D
D
O
N
LYS
SER
41
43
2.11
3
C
C
O
N
LYS
SER
29
31
2.12
3
A
B
O2'
OP1
G
G
10
19
2.12
3
A
C
N7
O
G
GLN
5
26
2.14
3
A
A
O6
O6
G
G
4
7
2.16
3
A
C
O6
NE1
G
TRP
11
27
2.16
3
A
A
O6
O6
G
G
2
11
2.16
3
B
B
O6
O6
G
G
16
19
2.16
3
B
D
O6
NE1
G
TRP
23
39
2.17
3
B
D
N7
O
G
GLN
17
38
2.18
4
D
D
HZ1
HD21
LYS
ASN
44
48
1.17
4
D
D
HB2
HE1
GLN
TRP
38
39
1.22
4
C
C
HB2
HE1
GLN
TRP
26
27
1.23
4
B
B
HO2'
OP2
G
G
19
20
1.29
4
B
B
H22
O2'
G
G
17
19
1.35
4
A
B
HO3'
N7
A
A
12
18
1.36
4
A
B
H62
O3'
A
A
6
24
1.39
4
B
B
HO2'
OP1
A
G
21
22
1.41
4
A
A
H22
O2'
G
G
5
7
1.42
4
B
B
H1
N7
G
G
20
23
1.43
4
A
A
H1
N7
G
G
8
11
1.43
4
A
B
O3'
H62
A
A
12
18
1.45
4
A
A
O2'
H8
A
G
6
7
1.46
4
A
B
N3
HO2'
G
A
10
18
1.47
4
A
A
N3
H1'
G
A
11
12
1.47
4
B
B
N3
H1'
G
A
23
24
1.47
4
B
B
O2'
H8
A
G
18
19
1.48
4
A
A
HO2'
O5'
G
G
10
11
1.50
4
A
A
N3
H62
G
A
7
9
1.51
4
A
B
H1'
O4'
G
G
4
13
1.52
4
A
A
H22
N7
G
A
1
3
1.54
4
B
B
H22
N7
G
A
13
15
1.54
4
A
B
OP1
HO2'
G
G
7
22
1.55
4
A
B
O4'
H1'
G
G
1
16
1.57
4
A
A
HO2'
OP2
G
A
5
6
1.58
4
B
B
N3
H62
G
A
19
21
1.58
4
B
B
N7
H21
G
G
14
23
1.58
4
A
A
H4'
O5'
G
A
5
6
1.59
4
A
A
N7
H21
G
G
2
11
1.59
4
A
A
O4'
H61
G
A
1
3
1.59
4
B
B
O6
O6
G
G
20
23
1.98
4
A
A
O6
O6
G
G
8
11
1.99
4
A
B
O2'
N3
A
G
6
22
2.01
4
C
C
O
N
LYS
SER
29
31
2.11
4
A
B
OP1
O2'
G
G
7
22
2.11
4
D
D
O
N
LYS
SER
41
43
2.11
4
A
C
N7
O
G
GLN
5
26
2.15
4
B
D
N7
O
G
GLN
17
38
2.15
4
A
C
O6
NE1
G
TRP
11
27
2.15
4
A
A
O6
O6
G
G
4
7
2.15
4
A
A
O6
O6
G
G
2
11
2.16
4
B
B
O6
O6
G
G
14
23
2.16
4
B
D
O6
NE1
G
TRP
23
39
2.17
4
A
B
O6
O6
G
G
7
19
2.19
5
D
D
HZ2
HD21
LYS
ASN
44
48
1.16
5
C
C
HZ3
HD22
LYS
ASN
32
36
1.19
5
D
D
HB2
HE1
GLN
TRP
38
39
1.23
5
C
C
HB2
HE1
GLN
TRP
26
27
1.23
5
A
A
H21
HO2'
G
A
4
6
1.24
5
A
A
HO5'
OP1
G
G
1
2
1.26
5
A
B
O3'
H62
A
A
12
18
1.40
5
B
B
O2'
H8
A
G
18
19
1.42
5
A
A
H22
O2'
G
G
5
7
1.44
5
B
B
H22
O2'
G
G
17
19
1.44
5
A
A
H1
N7
G
G
8
11
1.44
5
A
A
O4'
H61
G
A
1
3
1.46
5
B
B
H1
N7
G
G
20
23
1.46
5
A
A
O2'
H8
A
G
6
7
1.47
5
B
B
N3
H1'
G
A
23
24
1.48
5
A
A
N3
H1'
G
A
11
12
1.48
5
A
A
H22
N7
G
A
1
3
1.48
5
B
B
H22
N7
G
A
13
15
1.50
5
A
A
N3
H62
G
A
7
9
1.51
5
B
B
O4'
H61
G
A
13
15
1.51
5
B
B
N3
H62
G
A
19
21
1.51
5
A
B
O4'
H1'
G
G
1
16
1.53
5
B
B
HO2'
OP2
G
A
23
24
1.54
5
B
B
N7
H21
G
G
14
23
1.57
5
C
C
O
HD21
THR
ASN
35
36
1.59
5
A
B
H1'
OP1
G
G
10
19
1.59
5
B
B
O2'
O4'
G
A
23
24
1.79
5
B
B
O6
O6
G
G
20
23
1.99
5
A
A
O6
O6
G
G
8
11
1.99
5
A
B
N3
O2'
G
A
10
18
2.08
5
D
D
O
N
LYS
SER
41
43
2.11
5
A
B
O2'
OP1
G
G
10
19
2.12
5
C
C
O
N
LYS
SER
29
31
2.13
5
B
D
N7
O
G
GLN
17
38
2.15
5
A
A
O6
O6
G
G
2
11
2.15
5
A
C
O6
NE1
G
TRP
11
27
2.16
5
A
C
N7
O
G
GLN
5
26
2.16
5
B
D
O6
NE1
G
TRP
23
39
2.16
5
A
A
O6
O6
G
G
4
7
2.16
5
B
B
O6
O6
G
G
14
23
2.16
5
B
B
O6
O6
G
G
16
19
2.17
5
A
B
O2'
N3
A
G
6
22
2.18
5
A
A
O6
O6
G
G
2
5
2.19
6
D
D
HZ3
H
LYS
THR
46
47
1.17
6
C
C
HZ2
HD21
LYS
ASN
32
36
1.19
6
D
D
HB2
HE1
GLN
TRP
38
39
1.22
6
C
C
HB2
HE1
GLN
TRP
26
27
1.23
6
A
B
H62
O3'
A
A
6
24
1.38
6
B
B
H22
O2'
G
G
17
19
1.40
6
A
A
O2'
H8
A
G
6
7
1.43
6
B
B
O2'
H8
A
G
18
19
1.43
6
A
A
H22
O2'
G
G
5
7
1.43
6
A
B
HO3'
N7
A
A
12
18
1.44
6
B
B
H1
N7
G
G
20
23
1.44
6
A
A
HO2'
OP2
G
A
2
3
1.45
6
A
A
H1
N7
G
G
8
11
1.46
6
B
B
N3
H1'
G
A
23
24
1.48
6
A
A
N3
H1'
G
A
11
12
1.49
6
B
B
HO2'
OP1
A
G
15
16
1.49
6
A
A
N3
H62
G
A
7
9
1.50
6
A
B
N3
HO2'
G
A
10
18
1.51
6
A
B
N7
HO3'
A
A
6
24
1.52
6
B
B
N3
H62
G
A
19
21
1.52
6
B
B
H22
N7
G
A
13
15
1.53
6
A
A
H22
N7
G
A
1
3
1.54
6
A
B
O4'
H1'
G
G
1
16
1.54
6
A
A
HO2'
OP2
G
A
11
12
1.55
6
B
B
O4'
H61
G
A
13
15
1.57
6
A
B
H1'
O4'
G
G
4
13
1.57
6
A
A
N7
H21
G
G
2
11
1.57
6
A
A
O4'
H61
G
A
1
3
1.57
6
D
D
O
HG1
LYS
THR
46
47
1.58
6
A
A
O2'
O4'
G
A
11
12
1.79
6
A
A
O6
O6
G
G
8
11
1.99
6
B
B
O6
O6
G
G
20
23
1.99
6
A
B
N3
O2'
G
A
10
18
2.05
6
A
B
O2'
N3
A
G
6
22
2.07
6
C
C
O
N
LYS
SER
29
31
2.12
6
A
B
OP1
O2'
G
G
7
22
2.12
6
D
D
O
N
LYS
SER
41
43
2.13
6
B
D
N7
O
G
GLN
17
38
2.15
6
A
C
N7
O
G
GLN
5
26
2.15
6
B
D
O6
NE1
G
TRP
23
39
2.15
6
B
B
O6
O6
G
G
14
23
2.16
6
B
B
O6
O6
G
G
16
19
2.16
6
A
C
O6
NE1
G
TRP
11
27
2.16
6
A
A
O6
O6
G
G
2
11
2.16
6
A
A
O6
O6
G
G
4
7
2.18
7
C
C
HZ2
HD21
LYS
ASN
32
36
1.19
7
C
C
HB2
HE1
GLN
TRP
26
27
1.22
7
D
D
HB2
HE1
GLN
TRP
38
39
1.24
7
B
B
HO5'
OP1
G
G
13
14
1.26
7
A
A
H21
HO2'
G
A
4
6
1.30
7
B
B
O2'
H8
A
G
18
19
1.34
7
A
B
N7
HO3'
A
A
6
24
1.41
7
A
A
H22
O2'
G
G
5
7
1.43
7
A
B
O3'
H62
A
A
12
18
1.44
7
A
A
H1
N7
G
G
8
11
1.45
7
B
B
N3
H1'
G
A
23
24
1.46
7
A
A
N3
H1'
G
A
11
12
1.47
7
B
B
H1
N7
G
G
20
23
1.47
7
A
B
N3
HO2'
G
A
10
18
1.48
7
B
B
O4'
H61
G
A
13
15
1.48
7
A
A
N3
H62
G
A
7
9
1.49
7
A
B
H1'
O4'
G
G
4
13
1.49
7
B
B
H22
N7
G
A
13
15
1.50
7
A
A
O2'
H8
A
G
6
7
1.51
7
A
A
H22
N7
G
A
1
3
1.51
7
A
B
O4'
H1'
G
G
1
16
1.52
7
A
B
H62
O3'
A
A
6
24
1.54
7
A
A
N7
H21
G
G
2
11
1.58
7
B
B
N7
H21
G
G
14
23
1.59
7
B
B
N3
H62
G
A
19
21
1.59
7
A
A
O6
O6
G
G
8
11
2.00
7
B
B
O6
O6
G
G
20
23
2.00
7
D
D
O
N
LYS
SER
41
43
2.09
7
C
C
O
N
LYS
SER
29
31
2.11
7
B
B
O6
O6
G
G
16
19
2.14
7
A
C
N7
O
G
GLN
5
26
2.15
7
A
B
N3
O2'
G
A
10
18
2.15
7
B
D
N7
O
G
GLN
17
38
2.16
7
B
D
O6
NE1
G
TRP
23
39
2.16
7
A
A
O6
O6
G
G
2
11
2.17
7
A
C
O6
NE1
G
TRP
11
27
2.17
7
B
B
O6
O6
G
G
14
23
2.17
7
A
A
O6
O6
G
G
4
7
2.18
8
C
C
HD22
HZ2
ASN
LYS
28
32
1.18
8
D
D
HZ1
H
LYS
THR
46
47
1.19
8
D
D
HB2
HE1
GLN
TRP
38
39
1.22
8
C
C
HB2
HE1
GLN
TRP
26
27
1.23
8
B
B
HO2'
OP1
A
G
21
22
1.23
8
B
B
H21
HO2'
G
A
16
18
1.27
8
A
A
HO5'
OP1
G
G
1
2
1.29
8
B
B
H22
O2'
G
G
17
19
1.41
8
A
A
H1
N7
G
G
8
11
1.43
8
B
B
H1
N7
G
G
20
23
1.44
8
A
B
O3'
H62
A
A
12
18
1.44
8
A
B
H62
O3'
A
A
6
24
1.44
8
B
B
O2'
H8
A
G
18
19
1.45
8
A
A
H22
O2'
G
G
5
7
1.46
8
B
B
N3
H1'
G
A
23
24
1.47
8
A
A
N3
H1'
G
A
11
12
1.47
8
B
B
H22
N7
G
A
13
15
1.49
8
A
B
HO2'
N3
A
G
6
22
1.50
8
B
B
N3
H62
G
A
19
21
1.50
8
A
A
N3
H62
G
A
7
9
1.50
8
A
A
O2'
H8
A
G
6
7
1.52
8
A
B
O4'
H1'
G
G
1
16
1.53
8
A
B
H1'
O4'
G
G
4
13
1.54
8
A
A
H22
N7
G
A
1
3
1.55
8
A
A
N7
H21
G
G
2
11
1.59
8
A
A
H22
N7
G
A
7
9
1.59
8
A
B
O5'
HO2'
G
G
7
22
1.60
8
B
B
O6
O6
G
G
20
23
1.99
8
A
A
O6
O6
G
G
8
11
1.99
8
C
C
O
N
LYS
SER
29
31
2.11
8
D
D
O
N
LYS
SER
41
43
2.13
8
B
D
O6
NE1
G
TRP
23
39
2.15
8
B
D
N7
O
G
GLN
17
38
2.15
8
B
B
O6
O6
G
G
14
23
2.15
8
B
B
O6
O6
G
G
16
19
2.16
8
A
A
O6
O6
G
G
4
7
2.17
8
A
C
N7
O
G
GLN
5
26
2.17
8
A
C
O6
NE1
G
TRP
11
27
2.18
8
A
B
N3
O2'
G
A
10
18
2.18
8
A
A
O6
O6
G
G
2
11
2.19
9
C
C
HB2
HE1
GLN
TRP
26
27
1.24
9
D
D
HB2
HE1
GLN
TRP
38
39
1.25
9
B
B
HO5'
OP1
G
G
13
14
1.27
9
B
B
H22
O2'
G
G
17
19
1.38
9
A
A
H22
O2'
G
G
5
7
1.40
9
A
A
H1
N7
G
G
8
11
1.42
9
B
B
H1
N7
G
G
20
23
1.44
9
A
B
H62
O3'
A
A
6
24
1.45
9
B
B
N3
H1'
G
A
23
24
1.48
9
A
A
N3
H1'
G
A
11
12
1.48
9
A
A
N3
H62
G
A
7
9
1.48
9
A
A
HO2'
OP1
A
G
3
4
1.48
9
A
A
O2'
H8
A
G
6
7
1.49
9
A
B
O3'
H62
A
A
12
18
1.50
9
A
B
N3
HO2'
G
A
10
18
1.51
9
A
B
HO2'
N3
A
G
6
22
1.51
9
B
B
O2'
H8
A
G
18
19
1.52
9
A
A
H22
N7
G
A
1
3
1.54
9
B
B
H4'
OP1
G
A
14
15
1.55
9
A
A
H4'
OP1
G
A
2
3
1.55
9
B
B
H22
N7
G
A
13
15
1.55
9
A
B
H1'
O4'
G
G
4
13
1.56
9
B
B
N3
H62
G
A
19
21
1.56
9
A
B
O4'
H1'
G
G
1
16
1.56
9
B
B
N7
H21
G
G
14
23
1.58
9
A
A
N7
H21
G
G
2
11
1.59
9
B
B
O6
O6
G
G
20
23
1.99
9
A
A
O6
O6
G
G
8
11
1.99
9
D
D
O
N
LYS
SER
41
43
2.11
9
C
C
O
N
LYS
SER
29
31
2.11
9
A
C
O6
NE1
G
TRP
11
27
2.15
9
A
A
O6
O6
G
G
4
7
2.16
9
B
D
O6
NE1
G
TRP
23
39
2.17
9
B
D
N7
O
G
GLN
17
38
2.18
9
A
C
N7
O
G
GLN
5
26
2.18
9
A
A
O6
O6
G
G
2
11
2.18
9
B
B
O6
O6
G
G
14
23
2.18
10
C
C
HD22
HZ3
ASN
LYS
28
32
1.17
10
C
C
HB2
HE1
GLN
TRP
26
27
1.22
10
D
D
HB2
HE1
GLN
TRP
38
39
1.23
10
B
B
HO5'
OP1
G
G
13
14
1.24
10
A
A
H1
N7
G
G
8
11
1.42
10
B
B
H22
O2'
G
G
17
19
1.42
10
A
B
O3'
H62
A
A
12
18
1.44
10
B
B
H1
N7
G
G
20
23
1.44
10
A
A
H22
O2'
G
G
5
7
1.45
10
B
B
N3
H1'
G
A
23
24
1.47
10
A
A
N3
H1'
G
A
11
12
1.48
10
A
B
H62
O3'
A
A
6
24
1.49
10
B
B
H22
N7
G
A
13
15
1.49
10
B
B
O2'
H8
A
G
18
19
1.49
10
A
B
HO2'
N3
A
G
6
22
1.50
10
A
B
N3
HO2'
G
A
10
18
1.50
10
A
A
N3
H62
G
A
7
9
1.51
10
A
A
O2'
H8
A
G
6
7
1.51
10
B
B
N3
H62
G
A
19
21
1.52
10
A
B
O4'
H1'
G
G
1
16
1.53
10
B
B
O4'
H61
G
A
13
15
1.54
10
A
B
H1'
O4'
G
G
4
13
1.55
10
A
A
H4'
OP1
G
A
2
3
1.55
10
A
A
H1'
OP2
G
G
1
2
1.58
10
B
B
N7
H21
G
G
14
23
1.59
10
B
B
H21
N7
G
G
19
22
1.60
10
A
A
O6
O6
G
G
8
11
1.99
10
B
B
O6
O6
G
G
20
23
2.00
10
C
C
O
N
LYS
SER
29
31
2.11
10
D
D
O
N
LYS
SER
41
43
2.11
10
B
D
N7
O
G
GLN
17
38
2.15
10
B
B
O6
O6
G
G
14
23
2.16
10
B
D
O6
NE1
G
TRP
23
39
2.16
10
B
B
O6
O6
G
G
16
19
2.17
10
A
A
O6
O6
G
G
4
7
2.17
10
A
C
N7
O
G
GLN
5
26
2.18
10
A
C
O2'
OD1
G
ASN
8
36
2.18
10
A
C
O6
NE1
G
TRP
11
27
2.18
10
A
A
O6
O6
G
G
2
11
2.19
1
A
G
7
0.085
SIDE CHAIN
1
A
A
12
0.066
SIDE CHAIN
1
B
G
19
0.089
SIDE CHAIN
1
B
A
24
0.061
SIDE CHAIN
2
A
G
7
0.089
SIDE CHAIN
2
A
A
12
0.070
SIDE CHAIN
2
B
G
19
0.083
SIDE CHAIN
2
B
G
22
0.055
SIDE CHAIN
2
B
A
24
0.067
SIDE CHAIN
3
A
A
6
0.059
SIDE CHAIN
3
A
G
7
0.082
SIDE CHAIN
3
A
G
10
0.056
SIDE CHAIN
3
A
A
12
0.065
SIDE CHAIN
3
B
G
19
0.087
SIDE CHAIN
3
B
G
22
0.048
SIDE CHAIN
3
B
A
24
0.068
SIDE CHAIN
4
A
A
6
0.049
SIDE CHAIN
4
A
G
7
0.081
SIDE CHAIN
4
A
G
10
0.048
SIDE CHAIN
4
A
A
12
0.065
SIDE CHAIN
4
B
G
19
0.098
SIDE CHAIN
4
B
G
22
0.055
SIDE CHAIN
4
B
A
24
0.058
SIDE CHAIN
5
A
G
7
0.083
SIDE CHAIN
5
A
G
10
0.053
SIDE CHAIN
5
A
A
12
0.062
SIDE CHAIN
5
B
A
18
0.054
SIDE CHAIN
5
B
G
19
0.085
SIDE CHAIN
5
B
G
22
0.052
SIDE CHAIN
5
B
A
24
0.071
SIDE CHAIN
6
A
A
6
0.054
SIDE CHAIN
6
A
G
7
0.085
SIDE CHAIN
6
A
G
10
0.053
SIDE CHAIN
6
A
A
12
0.072
SIDE CHAIN
6
B
G
19
0.078
SIDE CHAIN
6
B
G
22
0.053
SIDE CHAIN
6
B
A
24
0.064
SIDE CHAIN
7
A
G
7
0.089
SIDE CHAIN
7
A
A
12
0.063
SIDE CHAIN
7
B
G
19
0.060
SIDE CHAIN
7
B
G
22
0.053
SIDE CHAIN
7
B
A
24
0.066
SIDE CHAIN
8
A
G
7
0.091
SIDE CHAIN
8
A
G
10
0.046
SIDE CHAIN
8
A
A
12
0.064
SIDE CHAIN
8
B
G
19
0.080
SIDE CHAIN
8
B
G
22
0.050
SIDE CHAIN
8
B
A
24
0.063
SIDE CHAIN
9
A
G
7
0.083
SIDE CHAIN
9
A
A
12
0.065
SIDE CHAIN
9
B
G
19
0.093
SIDE CHAIN
9
B
A
24
0.064
SIDE CHAIN
10
A
G
7
0.091
SIDE CHAIN
10
A
A
12
0.063
SIDE CHAIN
10
B
G
19
0.087
SIDE CHAIN
10
B
G
22
0.048
SIDE CHAIN
10
B
A
24
0.067
SIDE CHAIN
1
2.41
0.40
105.40
107.81
A
A
A
N9
C4
C5
G
G
G
1
1
1
N
1
-5.76
0.70
109.70
103.94
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
1
-5.57
0.70
109.70
104.13
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
1
-11.42
1.80
110.60
99.18
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
1
13.45
2.10
111.70
125.15
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
1
-8.36
1.20
103.30
94.94
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
1
-13.82
2.20
117.20
103.38
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
1
-11.52
1.80
110.60
99.08
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
1
13.36
2.10
111.70
125.06
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
1
-8.55
1.20
103.30
94.75
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
1
-13.85
2.20
117.20
103.35
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
2
-4.53
0.70
109.70
105.17
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
2
-5.72
0.70
109.70
103.98
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
2
-11.53
1.80
110.60
99.07
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
2
13.34
2.10
111.70
125.04
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
2
-8.55
1.20
103.30
94.75
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
2
-13.87
2.20
117.20
103.33
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
2
-11.36
1.80
110.60
99.24
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
2
13.54
2.10
111.70
125.24
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
2
-8.29
1.20
103.30
95.01
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
2
-13.88
2.20
117.20
103.32
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
3
-5.75
0.70
109.70
103.95
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
3
-5.63
0.70
109.70
104.07
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
3
-11.35
1.80
110.60
99.25
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
3
13.41
2.10
111.70
125.11
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
3
-8.38
1.20
103.30
94.92
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
3
-13.72
2.20
117.20
103.48
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
3
-11.59
1.80
110.60
99.01
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
3
13.35
2.10
111.70
125.05
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
3
-8.56
1.20
103.30
94.74
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
3
-14.01
2.20
117.20
103.19
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
4
-5.70
0.70
109.70
104.00
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
4
-5.66
0.70
109.70
104.04
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
4
-11.69
1.80
110.60
98.91
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
4
13.30
2.10
111.70
125.00
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
4
-8.14
1.20
103.30
95.16
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
4
-13.89
2.20
117.20
103.31
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
4
-11.42
1.80
110.60
99.18
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
4
13.46
2.10
111.70
125.16
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
4
-8.56
1.20
103.30
94.74
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
4
-13.85
2.20
117.20
103.35
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
5
2.42
0.40
105.40
107.82
A
A
A
N9
C4
C5
G
G
G
1
1
1
N
5
-5.91
0.70
109.70
103.79
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
5
-4.57
0.70
109.70
105.13
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
5
-11.53
1.80
110.60
99.07
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
5
13.39
2.10
111.70
125.09
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
5
-8.63
1.20
103.30
94.67
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
5
-13.82
2.20
117.20
103.38
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
5
-11.49
1.80
110.60
99.11
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
5
13.32
2.10
111.70
125.02
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
5
-8.47
1.20
103.30
94.83
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
5
-13.81
2.20
117.20
103.39
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
6
-4.47
0.70
109.70
105.23
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
6
-5.92
0.70
109.70
103.78
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
6
-11.48
1.80
110.60
99.12
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
6
13.35
2.10
111.70
125.05
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
6
-8.51
1.20
103.30
94.79
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
6
-13.82
2.20
117.20
103.38
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
6
-11.31
1.80
110.60
99.29
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
6
13.51
2.10
111.70
125.21
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
6
-8.25
1.20
103.30
95.05
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
6
-13.88
2.20
117.20
103.32
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
7
-5.44
0.70
109.70
104.26
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
7
-5.63
0.70
109.70
104.07
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
7
-11.41
1.80
110.60
99.19
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
7
13.39
2.10
111.70
125.09
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
7
-8.54
1.20
103.30
94.76
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
7
-13.84
2.20
117.20
103.36
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
7
-11.53
1.80
110.60
99.07
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
7
13.05
2.10
111.70
124.75
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
7
-8.01
1.20
103.30
95.29
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
7
-13.76
2.20
117.20
103.44
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
8
-5.42
0.70
109.70
104.28
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
8
-5.90
0.70
109.70
103.80
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
8
-11.14
1.80
110.60
99.46
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
8
13.13
2.10
111.70
124.83
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
8
-8.34
1.20
103.30
94.96
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
8
-13.78
2.20
117.20
103.42
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
8
-11.34
1.80
110.60
99.26
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
8
13.51
2.10
111.70
125.21
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
8
-8.28
1.20
103.30
95.02
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
8
-13.85
2.20
117.20
103.35
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
9
2.52
0.40
105.40
107.92
A
A
A
N9
C4
C5
G
G
G
1
1
1
N
9
-5.82
0.70
109.70
103.88
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
9
2.44
0.40
105.40
107.84
B
B
B
N9
C4
C5
G
G
G
13
13
13
N
9
-5.61
0.70
109.70
104.09
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
9
-11.58
1.80
110.60
99.02
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
9
13.22
2.10
111.70
124.92
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
9
-8.21
1.20
103.30
95.09
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
9
-13.95
2.20
117.20
103.25
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
9
-11.29
1.80
110.60
99.31
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
9
13.43
2.10
111.70
125.13
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
9
-8.54
1.20
103.30
94.76
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
9
-13.78
2.20
117.20
103.42
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
10
-5.55
0.70
109.70
104.15
A
A
A
C1'
O4'
C4'
G
G
G
11
11
11
N
10
-5.54
0.70
109.70
104.16
B
B
B
C1'
O4'
C4'
G
G
G
23
23
23
N
10
-11.26
1.80
110.60
99.34
C
C
C
N
CA
CB
LYS
LYS
LYS
29
29
29
N
10
13.31
2.10
111.70
125.01
C
C
C
CB
CA
C
PRO
PRO
PRO
30
30
30
N
10
-8.42
1.20
103.30
94.88
C
C
C
N
CA
CB
PRO
PRO
PRO
30
30
30
N
10
-13.84
2.20
117.20
103.36
C
C
C
CA
C
N
PRO
PRO
SER
30
30
31
Y
10
-11.64
1.80
110.60
98.96
D
D
D
N
CA
CB
LYS
LYS
LYS
41
41
41
N
10
13.27
2.10
111.70
124.97
D
D
D
CB
CA
C
PRO
PRO
PRO
42
42
42
N
10
-8.13
1.20
103.30
95.17
D
D
D
N
CA
CB
PRO
PRO
PRO
42
42
42
N
10
-13.93
2.20
117.20
103.27
D
D
D
CA
C
N
PRO
PRO
SER
42
42
43
Y
1
A
A
N9
C4
G
G
5
5
-0.081
0.008
1.375
1.294
N
1
A
A
C6
N1
G
G
8
8
-0.059
0.007
1.391
1.332
N
1
A
A
C5
N7
G
G
8
8
-0.037
0.006
1.388
1.351
N
1
A
A
N7
C8
G
G
8
8
-0.038
0.006
1.305
1.267
N
1
A
A
C8
N9
A
A
12
12
-0.049
0.008
1.373
1.324
N
1
A
A
N9
C4
A
A
12
12
-0.040
0.006
1.374
1.334
N
1
B
B
N9
C4
G
G
17
17
-0.082
0.008
1.375
1.293
N
1
B
B
C6
N1
G
G
20
20
-0.059
0.007
1.391
1.332
N
1
B
B
C5
N7
G
G
20
20
-0.039
0.006
1.388
1.349
N
1
B
B
N7
C8
G
G
20
20
-0.039
0.006
1.305
1.266
N
1
B
B
C8
N9
A
A
24
24
-0.049
0.008
1.373
1.324
N
1
B
B
N9
C4
A
A
24
24
-0.040
0.006
1.374
1.334
N
1
C
C
CG
CD1
TRP
TRP
27
27
-0.092
0.014
1.363
1.271
N
1
C
C
NE1
CE2
TRP
TRP
27
27
-0.112
0.013
1.371
1.259
N
1
C
C
CD2
CE3
TRP
TRP
27
27
-0.125
0.015
1.399
1.274
N
1
D
D
CG
CD1
TRP
TRP
39
39
-0.093
0.014
1.363
1.270
N
1
D
D
NE1
CE2
TRP
TRP
39
39
-0.115
0.013
1.371
1.256
N
1
D
D
CD2
CE3
TRP
TRP
39
39
-0.124
0.015
1.399
1.275
N
2
A
A
N9
C4
G
G
5
5
-0.082
0.008
1.375
1.293
N
2
A
A
C6
N1
G
G
8
8
-0.060
0.007
1.391
1.331
N
2
A
A
C5
N7
G
G
8
8
-0.039
0.006
1.388
1.349
N
2
A
A
N7
C8
G
G
8
8
-0.039
0.006
1.305
1.266
N
2
A
A
N9
C4
A
A
12
12
-0.043
0.006
1.374
1.331
N
2
B
B
N9
C4
G
G
17
17
-0.080
0.008
1.375
1.295
N
2
B
B
C6
N1
G
G
20
20
-0.059
0.007
1.391
1.332
N
2
B
B
C5
N7
G
G
20
20
-0.037
0.006
1.388
1.351
N
2
B
B
N7
C8
G
G
20
20
-0.037
0.006
1.305
1.268
N
2
B
B
C8
N9
A
A
24
24
-0.048
0.008
1.373
1.325
N
2
B
B
N9
C4
A
A
24
24
-0.041
0.006
1.374
1.333
N
2
C
C
CG
CD1
TRP
TRP
27
27
-0.091
0.014
1.363
1.272
N
2
C
C
NE1
CE2
TRP
TRP
27
27
-0.118
0.013
1.371
1.253
N
2
C
C
CD2
CE3
TRP
TRP
27
27
-0.124
0.015
1.399
1.275
N
2
D
D
CG
CD1
TRP
TRP
39
39
-0.091
0.014
1.363
1.272
N
2
D
D
NE1
CE2
TRP
TRP
39
39
-0.113
0.013
1.371
1.258
N
2
D
D
CD2
CE3
TRP
TRP
39
39
-0.125
0.015
1.399
1.274
N
3
A
A
N9
C4
G
G
5
5
-0.077
0.008
1.375
1.298
N
3
A
A
C6
N1
G
G
8
8
-0.059
0.007
1.391
1.332
N
3
A
A
C5
N7
G
G
8
8
-0.038
0.006
1.388
1.350
N
3
A
A
N7
C8
G
G
8
8
-0.038
0.006
1.305
1.267
N
3
A
A
C8
N9
A
A
12
12
-0.050
0.008
1.373
1.323
N
3
A
A
N9
C4
A
A
12
12
-0.041
0.006
1.374
1.333
N
3
B
B
N9
C4
G
G
17
17
-0.080
0.008
1.375
1.295
N
3
B
B
C6
N1
G
G
20
20
-0.059
0.007
1.391
1.332
N
3
B
B
C5
N7
G
G
20
20
-0.040
0.006
1.388
1.348
N
3
B
B
N7
C8
G
G
20
20
-0.039
0.006
1.305
1.266
N
3
B
B
C8
N9
A
A
24
24
-0.048
0.008
1.373
1.325
N
3
B
B
N9
C4
A
A
24
24
-0.041
0.006
1.374
1.333
N
3
C
C
CG
CD1
TRP
TRP
27
27
-0.091
0.014
1.363
1.272
N
3
C
C
NE1
CE2
TRP
TRP
27
27
-0.114
0.013
1.371
1.257
N
3
C
C
CD2
CE3
TRP
TRP
27
27
-0.124
0.015
1.399
1.275
N
3
D
D
CG
CD1
TRP
TRP
39
39
-0.093
0.014
1.363
1.270
N
3
D
D
NE1
CE2
TRP
TRP
39
39
-0.112
0.013
1.371
1.259
N
3
D
D
CD2
CE3
TRP
TRP
39
39
-0.123
0.015
1.399
1.276
N
4
A
A
N9
C4
G
G
5
5
-0.076
0.008
1.375
1.299
N
4
A
A
C6
N1
G
G
8
8
-0.061
0.007
1.391
1.330
N
4
A
A
C5
N7
G
G
8
8
-0.039
0.006
1.388
1.349
N
4
A
A
N7
C8
G
G
8
8
-0.039
0.006
1.305
1.266
N
4
A
A
C8
N9
A
A
12
12
-0.049
0.008
1.373
1.324
N
4
A
A
N9
C4
A
A
12
12
-0.040
0.006
1.374
1.334
N
4
B
B
N9
C4
G
G
17
17
-0.085
0.008
1.375
1.290
N
4
B
B
C6
N1
G
G
20
20
-0.060
0.007
1.391
1.331
N
4
B
B
C5
N7
G
G
20
20
-0.041
0.006
1.388
1.347
N
4
B
B
N7
C8
G
G
20
20
-0.039
0.006
1.305
1.266
N
4
B
B
C8
N9
A
A
24
24
-0.048
0.008
1.373
1.325
N
4
B
B
N9
C4
A
A
24
24
-0.042
0.006
1.374
1.332
N
4
C
C
CG
CD1
TRP
TRP
27
27
-0.092
0.014
1.363
1.271
N
4
C
C
NE1
CE2
TRP
TRP
27
27
-0.115
0.013
1.371
1.256
N
4
C
C
CD2
CE3
TRP
TRP
27
27
-0.125
0.015
1.399
1.274
N
4
D
D
CG
CD1
TRP
TRP
39
39
-0.092
0.014
1.363
1.271
N
4
D
D
NE1
CE2
TRP
TRP
39
39
-0.114
0.013
1.371
1.257
N
4
D
D
CD2
CE3
TRP
TRP
39
39
-0.124
0.015
1.399
1.275
N
5
A
A
N9
C4
G
G
5
5
-0.081
0.008
1.375
1.294
N
5
A
A
C6
N1
G
G
8
8
-0.060
0.007
1.391
1.331
N
5
A
A
C5
N7
G
G
8
8
-0.037
0.006
1.388
1.351
N
5
A
A
N7
C8
G
G
8
8
-0.038
0.006
1.305
1.267
N
5
A
A
N9
C4
A
A
12
12
-0.040
0.006
1.374
1.334
N
5
B
B
N9
C4
G
G
17
17
-0.081
0.008
1.375
1.294
N
5
B
B
C6
N1
G
G
20
20
-0.059
0.007
1.391
1.332
N
5
B
B
C5
N7
G
G
20
20
-0.039
0.006
1.388
1.349
N
5
B
B
N7
C8
G
G
20
20
-0.039
0.006
1.305
1.266
N
5
B
B
N9
C4
A
A
24
24
-0.044
0.006
1.374
1.330
N
5
C
C
CG
CD1
TRP
TRP
27
27
-0.091
0.014
1.363
1.272
N
5
C
C
NE1
CE2
TRP
TRP
27
27
-0.113
0.013
1.371
1.258
N
5
C
C
CD2
CE3
TRP
TRP
27
27
-0.123
0.015
1.399
1.276
N
5
D
D
CG
CD1
TRP
TRP
39
39
-0.092
0.014
1.363
1.271
N
5
D
D
NE1
CE2
TRP
TRP
39
39
-0.117
0.013
1.371
1.254
N
5
D
D
CD2
CE3
TRP
TRP
39
39
-0.124
0.015
1.399
1.275
N
6
A
A
N9
C4
G
G
5
5
-0.082
0.008
1.375
1.293
N
6
A
A
C6
N1
G
G
8
8
-0.058
0.007
1.391
1.333
N
6
A
A
C5
N7
G
G
8
8
-0.039
0.006
1.388
1.349
N
6
A
A
N7
C8
G
G
8
8
-0.039
0.006
1.305
1.266
N
6
A
A
N3
C4
A
A
12
12
-0.037
0.006
1.344
1.307
N
6
A
A
N9
C4
A
A
12
12
-0.044
0.006
1.374
1.330
N
6
B
B
N9
C4
G
G
17
17
-0.079
0.008
1.375
1.296
N
6
B
B
C6
N1
G
G
20
20
-0.060
0.007
1.391
1.331
N
6
B
B
C5
N7
G
G
20
20
-0.037
0.006
1.388
1.351
N
6
B
B
N7
C8
G
G
20
20
-0.038
0.006
1.305
1.267
N
6
B
B
C8
N9
A
A
24
24
-0.049
0.008
1.373
1.324
N
6
B
B
N9
C4
A
A
24
24
-0.040
0.006
1.374
1.334
N
6
C
C
CG
CD1
TRP
TRP
27
27
-0.092
0.014
1.363
1.271
N
6
C
C
NE1
CE2
TRP
TRP
27
27
-0.117
0.013
1.371
1.254
N
6
C
C
CD2
CE3
TRP
TRP
27
27
-0.123
0.015
1.399
1.276
N
6
D
D
CG
CD1
TRP
TRP
39
39
-0.091
0.014
1.363
1.272
N
6
D
D
NE1
CE2
TRP
TRP
39
39
-0.114
0.013
1.371
1.257
N
6
D
D
CD2
CE3
TRP
TRP
39
39
-0.125
0.015
1.399
1.274
N
7
A
A
N9
C4
G
G
5
5
-0.078
0.008
1.375
1.297
N
7
A
A
C6
N1
G
G
8
8
-0.059
0.007
1.391
1.332
N
7
A
A
C5
N7
G
G
8
8
-0.040
0.006
1.388
1.348
N
7
A
A
N7
C8
G
G
8
8
-0.039
0.006
1.305
1.266
N
7
A
A
C8
N9
A
A
12
12
-0.050
0.008
1.373
1.323
N
7
A
A
N9
C4
A
A
12
12
-0.040
0.006
1.374
1.334
N
7
B
B
N9
C4
G
G
17
17
-0.079
0.008
1.375
1.296
N
7
B
B
C6
N1
G
G
20
20
-0.058
0.007
1.391
1.333
N
7
B
B
C5
N7
G
G
20
20
-0.038
0.006
1.388
1.350
N
7
B
B
N7
C8
G
G
20
20
-0.037
0.006
1.305
1.268
N
7
B
B
C8
N9
A
A
24
24
-0.052
0.008
1.373
1.321
N
7
B
B
N9
C4
A
A
24
24
-0.042
0.006
1.374
1.332
N
7
C
C
CG
CD1
TRP
TRP
27
27
-0.092
0.014
1.363
1.271
N
7
C
C
NE1
CE2
TRP
TRP
27
27
-0.114
0.013
1.371
1.257
N
7
C
C
CD2
CE3
TRP
TRP
27
27
-0.123
0.015
1.399
1.276
N
7
D
D
CG
CD1
TRP
TRP
39
39
-0.092
0.014
1.363
1.271
N
7
D
D
NE1
CE2
TRP
TRP
39
39
-0.113
0.013
1.371
1.258
N
7
D
D
CD2
CE3
TRP
TRP
39
39
-0.126
0.015
1.399
1.273
N
8
A
A
N9
C4
G
G
1
1
-0.049
0.008
1.375
1.326
N
8
A
A
N9
C4
G
G
5
5
-0.082
0.008
1.375
1.293
N
8
A
A
C6
N1
G
G
8
8
-0.060
0.007
1.391
1.331
N
8
A
A
C5
N7
G
G
8
8
-0.039
0.006
1.388
1.349
N
8
A
A
N7
C8
G
G
8
8
-0.038
0.006
1.305
1.267
N
8
A
A
C8
N9
A
A
12
12
-0.049
0.008
1.373
1.324
N
8
A
A
N9
C4
A
A
12
12
-0.041
0.006
1.374
1.333
N
8
B
B
N9
C4
G
G
17
17
-0.081
0.008
1.375
1.294
N
8
B
B
C6
N1
G
G
20
20
-0.059
0.007
1.391
1.332
N
8
B
B
C5
N7
G
G
20
20
-0.038
0.006
1.388
1.350
N
8
B
B
N7
C8
G
G
20
20
-0.038
0.006
1.305
1.267
N
8
B
B
C8
N9
A
A
24
24
-0.050
0.008
1.373
1.323
N
8
B
B
N9
C4
A
A
24
24
-0.040
0.006
1.374
1.334
N
8
C
C
CG
CD1
TRP
TRP
27
27
-0.092
0.014
1.363
1.271
N
8
C
C
NE1
CE2
TRP
TRP
27
27
-0.114
0.013
1.371
1.257
N
8
C
C
CD2
CE3
TRP
TRP
27
27
-0.123
0.015
1.399
1.276
N
8
D
D
CG
CD1
TRP
TRP
39
39
-0.092
0.014
1.363
1.271
N
8
D
D
NE1
CE2
TRP
TRP
39
39
-0.113
0.013
1.371
1.258
N
8
D
D
CD2
CE3
TRP
TRP
39
39
-0.123
0.015
1.399
1.276
N
9
A
A
N9
C4
G
G
1
1
-0.050
0.008
1.375
1.325
N
9
A
A
N9
C4
G
G
5
5
-0.081
0.008
1.375
1.294
N
9
A
A
C6
N1
G
G
8
8
-0.060
0.007
1.391
1.331
N
9
A
A
C5
N7
G
G
8
8
-0.039
0.006
1.388
1.349
N
9
A
A
N7
C8
G
G
8
8
-0.039
0.006
1.305
1.266
N
9
A
A
C8
N9
A
A
12
12
-0.050
0.008
1.373
1.323
N
9
A
A
N9
C4
A
A
12
12
-0.040
0.006
1.374
1.334
N
9
B
B
N9
C4
G
G
13
13
-0.049
0.008
1.375
1.326
N
9
B
B
N9
C4
G
G
17
17
-0.082
0.008
1.375
1.293
N
9
B
B
C6
N1
G
G
20
20
-0.060
0.007
1.391
1.331
N
9
B
B
C5
N7
G
G
20
20
-0.039
0.006
1.388
1.349
N
9
B
B
N7
C8
G
G
20
20
-0.038
0.006
1.305
1.267
N
9
B
B
C8
N9
A
A
24
24
-0.051
0.008
1.373
1.322
N
9
B
B
N9
C4
A
A
24
24
-0.039
0.006
1.374
1.335
N
9
C
C
CG
CD1
TRP
TRP
27
27
-0.092
0.014
1.363
1.271
N
9
C
C
NE1
CE2
TRP
TRP
27
27
-0.112
0.013
1.371
1.259
N
9
C
C
CD2
CE3
TRP
TRP
27
27
-0.123
0.015
1.399
1.276
N
9
D
D
CG
CD1
TRP
TRP
39
39
-0.092
0.014
1.363
1.271
N
9
D
D
NE1
CE2
TRP
TRP
39
39
-0.112
0.013
1.371
1.259
N
9
D
D
CD2
CE3
TRP
TRP
39
39
-0.123
0.015
1.399
1.276
N
10
A
A
N9
C4
G
G
5
5
-0.083
0.008
1.375
1.292
N
10
A
A
C6
N1
G
G
8
8
-0.060
0.007
1.391
1.331
N
10
A
A
C5
N7
G
G
8
8
-0.041
0.006
1.388
1.347
N
10
A
A
N7
C8
G
G
8
8
-0.040
0.006
1.305
1.265
N
10
A
A
C8
N9
A
A
12
12
-0.050
0.008
1.373
1.323
N
10
A
A
N9
C4
A
A
12
12
-0.041
0.006
1.374
1.333
N
10
B
B
N9
C4
G
G
17
17
-0.081
0.008
1.375
1.294
N
10
B
B
C6
N1
G
G
20
20
-0.061
0.007
1.391
1.330
N
10
B
B
C5
N7
G
G
20
20
-0.039
0.006
1.388
1.349
N
10
B
B
N7
C8
G
G
20
20
-0.039
0.006
1.305
1.266
N
10
B
B
C8
N9
A
A
24
24
-0.051
0.008
1.373
1.322
N
10
B
B
N9
C4
A
A
24
24
-0.040
0.006
1.374
1.334
N
10
C
C
CG
CD1
TRP
TRP
27
27
-0.091
0.014
1.363
1.272
N
10
C
C
NE1
CE2
TRP
TRP
27
27
-0.114
0.013
1.371
1.257
N
10
C
C
CD2
CE3
TRP
TRP
27
27
-0.122
0.015
1.399
1.277
N
10
D
D
CG
CD1
TRP
TRP
39
39
-0.093
0.014
1.363
1.270
N
10
D
D
NE1
CE2
TRP
TRP
39
39
-0.113
0.013
1.371
1.258
N
10
D
D
CD2
CE3
TRP
TRP
39
39
-0.125
0.015
1.399
1.274
N
1
C
TRP
27
-139.55
-51.79
1
C
ASN
28
-144.50
33.29
1
C
PRO
30
15.28
44.09
1
C
LYS
32
-47.12
94.17
1
C
THR
35
78.87
32.75
1
D
TRP
39
-140.76
-51.29
1
D
ASN
40
-145.14
33.49
1
D
PRO
42
15.30
44.58
1
D
LYS
44
-47.06
91.23
2
C
TRP
27
-141.36
-50.96
2
C
ASN
28
-145.40
33.22
2
C
PRO
30
15.26
44.62
2
C
LYS
32
-47.17
91.26
2
D
TRP
39
-139.99
-51.54
2
D
ASN
40
-144.30
32.95
2
D
PRO
42
15.61
44.57
2
D
LYS
44
-47.27
95.59
3
C
TRP
27
-140.65
-51.46
3
C
ASN
28
-144.54
32.99
3
C
PRO
30
15.42
44.53
3
C
LYS
32
-47.24
95.53
3
D
TRP
39
-138.05
-51.68
3
D
ASN
40
-144.38
33.12
3
D
PRO
42
15.21
44.66
3
D
LYS
44
-47.08
90.81
4
C
TRP
27
-140.51
-51.17
4
C
ASN
28
-145.03
32.84
4
C
PRO
30
15.00
44.41
4
C
LYS
32
-47.25
92.53
4
C
THR
35
48.75
25.35
4
D
TRP
39
-140.06
-51.51
4
D
ASN
40
-144.55
33.46
4
D
PRO
42
15.39
44.61
4
D
LYS
44
-47.08
91.21
5
C
TRP
27
-139.63
-51.81
5
C
ASN
28
-144.50
33.46
5
C
PRO
30
15.32
45.30
5
C
LYS
32
-47.19
93.06
5
D
TRP
39
-141.05
-51.07
5
D
ASN
40
-145.30
33.15
5
D
PRO
42
15.23
44.58
5
D
LYS
44
-47.19
91.09
6
C
TRP
27
-141.06
-51.28
6
C
ASN
28
-145.06
33.23
6
C
PRO
30
15.31
44.71
6
C
LYS
32
-47.05
91.10
6
D
TRP
39
-140.08
-51.53
6
D
ASN
40
-144.12
32.93
6
D
PRO
42
15.53
44.81
6
D
LYS
44
-47.28
95.34
7
C
TRP
27
-140.45
-51.43
7
C
ASN
28
-144.82
33.35
7
C
PRO
30
15.29
44.44
7
C
LYS
32
-47.03
91.22
7
D
TRP
39
-139.35
-51.10
7
D
ASN
40
-145.04
33.12
7
D
PRO
42
14.74
43.78
7
D
LYS
44
-47.20
91.73
8
C
TRP
27
-138.69
-51.89
8
C
ASN
28
-144.57
34.05
8
C
PRO
30
15.05
44.64
8
C
LYS
32
-46.89
91.55
8
C
THR
35
70.49
34.76
8
D
TRP
39
-140.39
-51.27
8
D
ASN
40
-144.56
32.98
8
D
PRO
42
15.44
44.86
8
D
LYS
44
-47.42
95.41
9
C
TRP
27
-138.31
-51.60
9
C
ASN
28
-144.57
32.82
9
C
PRO
30
14.94
44.54
9
C
LYS
32
-47.13
91.33
9
D
TRP
39
-139.19
-52.23
9
D
ASN
40
-144.58
33.71
9
D
PRO
42
15.43
44.23
9
D
LYS
44
-47.07
91.79
9
D
THR
47
75.50
54.99
10
C
TRP
27
-138.54
-51.96
10
C
ASN
28
-144.48
34.09
10
C
PRO
30
15.29
44.47
10
C
LYS
32
-46.91
91.80
10
C
THR
35
71.07
36.02
10
D
TRP
39
-140.18
-51.08
10
D
ASN
40
-144.81
32.63
10
D
PRO
42
15.08
44.34
10
D
LYS
44
-47.27
92.23
10
D
THR
47
48.07
25.73
N
lowest energy, model 1
RNA aptamer against prion protein in complex with the partial binding peptide
1
N
N
1
N
N
2
N
N
2
N
N
hydrog
TYPE_11_PAIR
A
G
1
A
N2
G
1
1_555
A
A
3
A
N7
A
3
1_555
hydrog
TYPE_11_PAIR
A
G
1
A
N3
G
1
1_555
A
A
3
A
N6
A
3
1_555
hydrog
TYPE_6_PAIR
A
G
1
A
N1
G
1
1_555
A
G
4
A
O6
G
4
1_555
hydrog
TYPE_6_PAIR
A
G
1
A
N2
G
1
1_555
A
G
4
A
N7
G
4
1_555
hydrog
TYPE_6_PAIR
A
G
1
A
N7
G
1
1_555
A
G
10
A
N2
G
10
1_555
hydrog
TYPE_6_PAIR
A
G
1
A
O6
G
1
1_555
A
G
10
A
N1
G
10
1_555
hydrog
G-G MISPAIR
A
G
2
A
N1
G
2
1_555
A
G
4
A
N7
G
4
1_555
hydrog
TYPE_6_PAIR
A
G
2
A
N1
G
2
1_555
A
G
5
A
O6
G
5
1_555
hydrog
TYPE_6_PAIR
A
G
2
A
N2
G
2
1_555
A
G
5
A
N7
G
5
1_555
hydrog
TYPE_6_PAIR
A
G
2
A
N7
G
2
1_555
A
G
11
A
N2
G
11
1_555
hydrog
TYPE_6_PAIR
A
G
2
A
O6
G
2
1_555
A
G
11
A
N1
G
11
1_555
hydrog
A-G MISPAIR
A
A
3
A
N7
A
3
1_555
B
G
13
B
N2
G
1
1_555
hydrog
G-A MISPAIR
A
G
4
A
N2
G
4
1_555
A
A
6
A
N3
A
6
1_555
hydrog
TYPE_6_PAIR
A
G
4
A
N1
G
4
1_555
A
G
7
A
O6
G
7
1_555
hydrog
TYPE_6_PAIR
A
G
4
A
N2
G
4
1_555
A
G
7
A
N7
G
7
1_555
hydrog
TYPE_6_PAIR
A
G
5
A
N1
G
5
1_555
A
G
8
A
O6
G
8
1_555
hydrog
TYPE_6_PAIR
A
G
5
A
N2
G
5
1_555
A
G
8
A
N7
G
8
1_555
hydrog
TYPE_11_PAIR
A
G
7
A
N2
G
7
1_555
A
A
9
A
N7
A
9
1_555
hydrog
TYPE_11_PAIR
A
G
7
A
N3
G
7
1_555
A
A
9
A
N6
A
9
1_555
hydrog
TYPE_6_PAIR
A
G
7
A
N1
G
7
1_555
A
G
10
A
O6
G
10
1_555
hydrog
TYPE_6_PAIR
A
G
7
A
N2
G
7
1_555
A
G
10
A
N7
G
10
1_555
hydrog
TYPE_3_PAIR
A
G
7
A
N1
G
7
1_555
B
G
19
B
O6
G
7
1_555
hydrog
TYPE_3_PAIR
A
G
7
A
O6
G
7
1_555
B
G
19
B
N1
G
7
1_555
hydrog
TYPE_6_PAIR
A
G
8
A
N1
G
8
1_555
A
G
10
A
O6
G
10
1_555
hydrog
TYPE_6_PAIR
A
G
8
A
N2
G
8
1_555
A
G
10
A
N7
G
10
1_555
hydrog
TYPE_6_PAIR
A
G
8
A
N1
G
8
1_555
A
G
11
A
O6
G
11
1_555
hydrog
TYPE_6_PAIR
A
G
8
A
N2
G
8
1_555
A
G
11
A
N7
G
11
1_555
hydrog
TYPE_11_PAIR
B
G
13
B
N2
G
1
1_555
B
A
15
B
N7
A
3
1_555
hydrog
TYPE_11_PAIR
B
G
13
B
N3
G
1
1_555
B
A
15
B
N6
A
3
1_555
hydrog
TYPE_6_PAIR
B
G
13
B
N1
G
1
1_555
B
G
16
B
O6
G
4
1_555
hydrog
TYPE_6_PAIR
B
G
13
B
N2
G
1
1_555
B
G
16
B
N7
G
4
1_555
hydrog
TYPE_6_PAIR
B
G
13
B
N7
G
1
1_555
B
G
22
B
N2
G
10
1_555
hydrog
TYPE_6_PAIR
B
G
13
B
O6
G
1
1_555
B
G
22
B
N1
G
10
1_555
hydrog
G-G MISPAIR
B
G
14
B
N1
G
2
1_555
B
G
16
B
N7
G
4
1_555
hydrog
TYPE_6_PAIR
B
G
14
B
N1
G
2
1_555
B
G
17
B
O6
G
5
1_555
hydrog
TYPE_6_PAIR
B
G
14
B
N2
G
2
1_555
B
G
17
B
N7
G
5
1_555
hydrog
TYPE_6_PAIR
B
G
14
B
N7
G
2
1_555
B
G
23
B
N2
G
11
1_555
hydrog
TYPE_6_PAIR
B
G
14
B
O6
G
2
1_555
B
G
23
B
N1
G
11
1_555
hydrog
G-A MISPAIR
B
G
16
B
N2
G
4
1_555
B
A
18
B
N3
A
6
1_555
hydrog
TYPE_6_PAIR
B
G
16
B
N1
G
4
1_555
B
G
19
B
O6
G
7
1_555
hydrog
TYPE_6_PAIR
B
G
16
B
N2
G
4
1_555
B
G
19
B
N7
G
7
1_555
hydrog
TYPE_6_PAIR
B
G
17
B
N1
G
5
1_555
B
G
20
B
O6
G
8
1_555
hydrog
TYPE_6_PAIR
B
G
17
B
N2
G
5
1_555
B
G
20
B
N7
G
8
1_555
hydrog
TYPE_11_PAIR
B
G
19
B
N2
G
7
1_555
B
A
21
B
N7
A
9
1_555
hydrog
TYPE_11_PAIR
B
G
19
B
N3
G
7
1_555
B
A
21
B
N6
A
9
1_555
hydrog
TYPE_6_PAIR
B
G
19
B
N1
G
7
1_555
B
G
22
B
O6
G
10
1_555
hydrog
TYPE_6_PAIR
B
G
19
B
N2
G
7
1_555
B
G
22
B
N7
G
10
1_555
hydrog
TYPE_6_PAIR
B
G
20
B
N1
G
8
1_555
B
G
22
B
O6
G
10
1_555
hydrog
TYPE_6_PAIR
B
G
20
B
N2
G
8
1_555
B
G
22
B
N7
G
10
1_555
hydrog
TYPE_6_PAIR
B
G
20
B
N1
G
8
1_555
B
G
23
B
O6
G
11
1_555
hydrog
TYPE_6_PAIR
B
G
20
B
N2
G
8
1_555
B
G
23
B
N7
G
11
1_555
Membrane Protein/RNA
Aptamer, Prion, RNA, Alzheimer's disease, Membrane Protein-RNA complex
2RSK
PDB
1
1
2RSK
GGAGGAGGAGGA
PRIO_BOVIN
UNP
2
108
P10279
GQWNKPSKPKTN
1
12
2RSK
1
12
2RSK
A
1
1
12
13
24
2RSK
13
24
2RSK
B
1
1
12
108
119
2RSK
25
36
P10279
C
2
1
12
108
119
2RSK
37
48
P10279
D
2
1
12