0.015513
0.008957
0.000000
0.000000
0.017913
0.000000
0.000000
0.000000
0.004209
0.00000
0.00000
0.00000
MET 1 - SIDE CHAIN OMITTED.
ASP 20 - SIDE CHAIN BEYOND CB OMITTED.
ARG 30 - SIDE CHAIN BEYOND CB OMITTED.
ARG 86 - SIDE CHAIN BEYOND CB OMITTED.
LYS 91 - SIDE CHAIN BEYOND CG OMITTED.
GLU 92 - SIDE CHAIN BEYOND CB OMITTED.
GLU 103 - SIDE CHAIN BEYOND CB OMITTED.
GLU 112 - SIDE CHAIN BEYOND CB OMITTED.
ILE 158 - SIDE CHAIN BEYOND CB OMITTED.
GLU 159 - SIDE CHAIN BEYOND CB OMITTED.
THR 160 - SIDE CHAIN BEYOND CB OMITTED.
ARG 214 - SIDE CHAIN BEYOND CB OMITTED.
LYS 230 - SIDE CHAIN BEYOND CG OMITTED.
LYS 233 - SIDE CHAIN BEYOND CB OMITTED.
GLU 235 - SIDE CHAIN BEYOND CB OMITTED.
SER 236 - SIDE CHAIN BEYOND CB OMITTED.
GLU 276 - SIDE CHAIN BEYOND CG OMITTED.
GLU 284 - SIDE CHAIN BEYOND CB OMITTED.
GLU 287 - SIDE CHAIN BEYOND CG OMITTED.
GLU 290 - SIDE CHAIN BEYOND CB OMITTED.
LYS 291 - SIDE CHAIN BEYOND CG OMITTED.
LYS 296 - SIDE CHAIN BEYOND CG OMITTED.
GLU 310 - SIDE CHAIN BEYOND CB OMITTED.
SER 319 - SIDE CHAIN BEYOND CB OMITTED.
Brick, P.
Bhat, T.N.
Blow, D.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
64.460
64.460
237.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
208
83
98
10.1016/0022-2836(89)90090-9
2504923
Structure of tyrosyl-tRNA synthetase refined at 2.3 A resolution. Interaction of the enzyme with the tyrosyl adenylate intermediate.
1989
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
194
287
Crystal Structure of a Deletion Mutant of a Tyrosyl-T/RNA Synthetase Complexed with Tyrosine
1987
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
173
477
Interaction of Crystalline Tyrosol-T/RNA Synthetase with Adenosine, Adenosine Monophosphate, Adenosine Triphosphate and Pyrophosphate in the Presence of Tyrosinol
1984
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
158
699
Tyrosyl-T/RNA Synthetase Forms a Mononucleotide-Binding Fold
1982
DK
Acta Crystallogr.,Sect.A
ACACEQ
0621
0108-7673
38
21
A Density-Modification Method for the Improvement of Poorly Resolved Protein Electron-Density Maps
1982
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
122
407
Binding of Tyrosine, Adenosine Triphosphate and Analogues to Crystalline Tyrosyl Transfer RNA Synthetase
1978
UK
Proc.FEBS Meet.
FEBPBY
0924
0071-4402
52
59
Structure of Aminoacyl T/RNA Synthetases
1978
US
Biochem.Biophys.Res.Commun.
BBRCA9
0146
0006-291X
76
728
The Peptide Chain of Tyrosyl T/RNA Synthetase. No Evidence for a Super-Secondary Structure of Four Alpha-Helices
1977
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
105
577
The Crystal Structure of Tyrosyl-Transfer RNA Synthetase at 2.7 Angstroms Resolution
1976
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
80
199
Crystallization and Preliminary X-Ray Diffraction Studies on Tyrosyl-Transfer RNA Synthetase from Bacillus Stearothermophilus
1973
10.2210/pdb2ts1/pdb
pdb_00002ts1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
47364.625
TYROSYL-TRNA SYNTHETASE
6.1.1.1
1
man
polymer
18.015
water
110
nat
water
no
no
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPS
GKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIET
GISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRISE
ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLE
GRFTVIRRGKKKYYLIRYA
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPS
GKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIET
GISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRISE
ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLE
GRFTVIRRGKKKYYLIRYA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Geobacillus
sample
1422
Geobacillus stearothermophilus
3.01
59.11
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Other
1
0
1989-10-15
1
1
2008-03-25
1
2
2011-07-13
1
3
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
1990-01-15
SPRSDE
Y
BNL
1989-06-29
REL
REL
HOH
water
HOH
324
2
HOH
HOH
420
A
HOH
325
2
HOH
HOH
421
A
HOH
326
2
HOH
HOH
422
A
HOH
327
2
HOH
HOH
423
A
HOH
328
2
HOH
HOH
424
A
HOH
329
2
HOH
HOH
425
A
HOH
330
2
HOH
HOH
426
A
HOH
331
2
HOH
HOH
427
A
HOH
332
2
HOH
HOH
428
A
HOH
333
2
HOH
HOH
429
A
HOH
334
2
HOH
HOH
430
A
HOH
335
2
HOH
HOH
431
A
HOH
336
2
HOH
HOH
432
A
HOH
337
2
HOH
HOH
433
A
HOH
338
2
HOH
HOH
434
A
HOH
340
2
HOH
HOH
435
A
HOH
341
2
HOH
HOH
436
A
HOH
342
2
HOH
HOH
437
A
HOH
343
2
HOH
HOH
438
A
HOH
344
2
HOH
HOH
439
A
HOH
345
2
HOH
HOH
440
A
HOH
346
2
HOH
HOH
441
A
HOH
347
2
HOH
HOH
442
A
HOH
348
2
HOH
HOH
443
A
HOH
349
2
HOH
HOH
444
A
HOH
350
2
HOH
HOH
445
A
HOH
351
2
HOH
HOH
446
A
HOH
352
2
HOH
HOH
447
A
HOH
353
2
HOH
HOH
448
A
HOH
354
2
HOH
HOH
449
A
HOH
355
2
HOH
HOH
450
A
HOH
356
2
HOH
HOH
451
A
HOH
358
2
HOH
HOH
452
A
HOH
359
2
HOH
HOH
453
A
HOH
360
2
HOH
HOH
454
A
HOH
361
2
HOH
HOH
455
A
HOH
362
2
HOH
HOH
456
A
HOH
363
2
HOH
HOH
457
A
HOH
364
2
HOH
HOH
458
A
HOH
365
2
HOH
HOH
459
A
HOH
366
2
HOH
HOH
460
A
HOH
367
2
HOH
HOH
461
A
HOH
368
2
HOH
HOH
462
A
HOH
369
2
HOH
HOH
463
A
HOH
370
2
HOH
HOH
464
A
HOH
371
2
HOH
HOH
465
A
HOH
372
2
HOH
HOH
466
A
HOH
373
2
HOH
HOH
467
A
HOH
374
2
HOH
HOH
468
A
HOH
375
2
HOH
HOH
469
A
HOH
376
2
HOH
HOH
470
A
HOH
377
2
HOH
HOH
471
A
HOH
379
2
HOH
HOH
472
A
HOH
381
2
HOH
HOH
473
A
HOH
388
2
HOH
HOH
474
A
HOH
389
2
HOH
HOH
475
A
HOH
390
2
HOH
HOH
476
A
HOH
391
2
HOH
HOH
477
A
HOH
392
2
HOH
HOH
478
A
HOH
393
2
HOH
HOH
479
A
HOH
394
2
HOH
HOH
480
A
HOH
395
2
HOH
HOH
481
A
HOH
396
2
HOH
HOH
482
A
HOH
397
2
HOH
HOH
483
A
HOH
398
2
HOH
HOH
484
A
HOH
399
2
HOH
HOH
485
A
HOH
400
2
HOH
HOH
486
A
HOH
401
2
HOH
HOH
487
A
HOH
402
2
HOH
HOH
488
A
HOH
403
2
HOH
HOH
489
A
HOH
404
2
HOH
HOH
490
A
HOH
405
2
HOH
HOH
491
A
HOH
406
2
HOH
HOH
492
A
HOH
407
2
HOH
HOH
493
A
HOH
408
2
HOH
HOH
494
A
HOH
409
2
HOH
HOH
495
A
HOH
410
2
HOH
HOH
496
A
HOH
411
2
HOH
HOH
497
A
HOH
412
2
HOH
HOH
498
A
HOH
413
2
HOH
HOH
499
A
HOH
414
2
HOH
HOH
500
A
HOH
501
2
HOH
HOH
501
A
HOH
504
2
HOH
HOH
502
A
HOH
508
2
HOH
HOH
503
A
HOH
511
2
HOH
HOH
504
A
HOH
512
2
HOH
HOH
505
A
HOH
514
2
HOH
HOH
506
A
HOH
517
2
HOH
HOH
507
A
HOH
518
2
HOH
HOH
508
A
HOH
520
2
HOH
HOH
509
A
HOH
523
2
HOH
HOH
510
A
HOH
525
2
HOH
HOH
511
A
HOH
527
2
HOH
HOH
512
A
HOH
529
2
HOH
HOH
513
A
HOH
530
2
HOH
HOH
514
A
HOH
536
2
HOH
HOH
515
A
HOH
539
2
HOH
HOH
516
A
HOH
545
2
HOH
HOH
517
A
HOH
550
2
HOH
HOH
518
A
HOH
554
2
HOH
HOH
519
A
HOH
558
2
HOH
HOH
520
A
HOH
565
2
HOH
HOH
521
A
HOH
567
2
HOH
HOH
522
A
HOH
568
2
HOH
HOH
523
A
HOH
571
2
HOH
HOH
524
A
HOH
572
2
HOH
HOH
525
A
HOH
573
2
HOH
HOH
526
A
HOH
576
2
HOH
HOH
527
A
HOH
577
2
HOH
HOH
528
A
HOH
584
2
HOH
HOH
529
A
MET
1
n
1
MET
1
A
ASP
2
n
2
ASP
2
A
LEU
3
n
3
LEU
3
A
LEU
4
n
4
LEU
4
A
ALA
5
n
5
ALA
5
A
GLU
6
n
6
GLU
6
A
LEU
7
n
7
LEU
7
A
GLN
8
n
8
GLN
8
A
TRP
9
n
9
TRP
9
A
ARG
10
n
10
ARG
10
A
GLY
11
n
11
GLY
11
A
LEU
12
n
12
LEU
12
A
VAL
13
n
13
VAL
13
A
ASN
14
n
14
ASN
14
A
GLN
15
n
15
GLN
15
A
THR
16
n
16
THR
16
A
THR
17
n
17
THR
17
A
ASP
18
n
18
ASP
18
A
GLU
19
n
19
GLU
19
A
ASP
20
n
20
ASP
20
A
GLY
21
n
21
GLY
21
A
LEU
22
n
22
LEU
22
A
ARG
23
n
23
ARG
23
A
LYS
24
n
24
LYS
24
A
LEU
25
n
25
LEU
25
A
LEU
26
n
26
LEU
26
A
ASN
27
n
27
ASN
27
A
GLU
28
n
28
GLU
28
A
GLU
29
n
29
GLU
29
A
ARG
30
n
30
ARG
30
A
VAL
31
n
31
VAL
31
A
THR
32
n
32
THR
32
A
LEU
33
n
33
LEU
33
A
TYR
34
n
34
TYR
34
A
CYS
35
n
35
CYS
35
A
GLY
36
n
36
GLY
36
A
PHE
37
n
37
PHE
37
A
ASP
38
n
38
ASP
38
A
PRO
39
n
39
PRO
39
A
THR
40
n
40
THR
40
A
ALA
41
n
41
ALA
41
A
ASP
42
n
42
ASP
42
A
SER
43
n
43
SER
43
A
LEU
44
n
44
LEU
44
A
HIS
45
n
45
HIS
45
A
ILE
46
n
46
ILE
46
A
GLY
47
n
47
GLY
47
A
HIS
48
n
48
HIS
48
A
LEU
49
n
49
LEU
49
A
ALA
50
n
50
ALA
50
A
THR
51
n
51
THR
51
A
ILE
52
n
52
ILE
52
A
LEU
53
n
53
LEU
53
A
THR
54
n
54
THR
54
A
MET
55
n
55
MET
55
A
ARG
56
n
56
ARG
56
A
ARG
57
n
57
ARG
57
A
PHE
58
n
58
PHE
58
A
GLN
59
n
59
GLN
59
A
GLN
60
n
60
GLN
60
A
ALA
61
n
61
ALA
61
A
GLY
62
n
62
GLY
62
A
HIS
63
n
63
HIS
63
A
ARG
64
n
64
ARG
64
A
PRO
65
n
65
PRO
65
A
ILE
66
n
66
ILE
66
A
ALA
67
n
67
ALA
67
A
LEU
68
n
68
LEU
68
A
VAL
69
n
69
VAL
69
A
GLY
70
n
70
GLY
70
A
GLY
71
n
71
GLY
71
A
ALA
72
n
72
ALA
72
A
THR
73
n
73
THR
73
A
GLY
74
n
74
GLY
74
A
LEU
75
n
75
LEU
75
A
ILE
76
n
76
ILE
76
A
GLY
77
n
77
GLY
77
A
ASP
78
n
78
ASP
78
A
PRO
79
n
79
PRO
79
A
SER
80
n
80
SER
80
A
GLY
81
n
81
GLY
81
A
LYS
82
n
82
LYS
82
A
LYS
83
n
83
LYS
83
A
SER
84
n
84
SER
84
A
GLU
85
n
85
GLU
85
A
ARG
86
n
86
ARG
86
A
THR
87
n
87
THR
87
A
LEU
88
n
88
LEU
88
A
ASN
89
n
89
ASN
89
A
ALA
90
n
90
ALA
90
A
LYS
91
n
91
LYS
91
A
GLU
92
n
92
GLU
92
A
THR
93
n
93
THR
93
A
VAL
94
n
94
VAL
94
A
GLU
95
n
95
GLU
95
A
ALA
96
n
96
ALA
96
A
TRP
97
n
97
TRP
97
A
SER
98
n
98
SER
98
A
ALA
99
n
99
ALA
99
A
ARG
100
n
100
ARG
100
A
ILE
101
n
101
ILE
101
A
LYS
102
n
102
LYS
102
A
GLU
103
n
103
GLU
103
A
GLN
104
n
104
GLN
104
A
LEU
105
n
105
LEU
105
A
GLY
106
n
106
GLY
106
A
ARG
107
n
107
ARG
107
A
PHE
108
n
108
PHE
108
A
LEU
109
n
109
LEU
109
A
ASP
110
n
110
ASP
110
A
PHE
111
n
111
PHE
111
A
GLU
112
n
112
GLU
112
A
ALA
113
n
113
ALA
113
A
ASP
114
n
114
ASP
114
A
GLY
115
n
115
GLY
115
A
ASN
116
n
116
ASN
116
A
PRO
117
n
117
PRO
117
A
ALA
118
n
118
ALA
118
A
LYS
119
n
119
LYS
119
A
ILE
120
n
120
ILE
120
A
LYS
121
n
121
LYS
121
A
ASN
122
n
122
ASN
122
A
ASN
123
n
123
ASN
123
A
TYR
124
n
124
TYR
124
A
ASP
125
n
125
ASP
125
A
TRP
126
n
126
TRP
126
A
ILE
127
n
127
ILE
127
A
GLY
128
n
128
GLY
128
A
PRO
129
n
129
PRO
129
A
LEU
130
n
130
LEU
130
A
ASP
131
n
131
ASP
131
A
VAL
132
n
132
VAL
132
A
ILE
133
n
133
ILE
133
A
THR
134
n
134
THR
134
A
PHE
135
n
135
PHE
135
A
LEU
136
n
136
LEU
136
A
ARG
137
n
137
ARG
137
A
ASP
138
n
138
ASP
138
A
VAL
139
n
139
VAL
139
A
GLY
140
n
140
GLY
140
A
LYS
141
n
141
LYS
141
A
HIS
142
n
142
HIS
142
A
PHE
143
n
143
PHE
143
A
SER
144
n
144
SER
144
A
VAL
145
n
145
VAL
145
A
ASN
146
n
146
ASN
146
A
TYR
147
n
147
TYR
147
A
MET
148
n
148
MET
148
A
MET
149
n
149
MET
149
A
ALA
150
n
150
ALA
150
A
LYS
151
n
151
LYS
151
A
GLU
152
n
152
GLU
152
A
SER
153
n
153
SER
153
A
VAL
154
n
154
VAL
154
A
GLN
155
n
155
GLN
155
A
SER
156
n
156
SER
156
A
ARG
157
n
157
ARG
157
A
ILE
158
n
158
ILE
158
A
GLU
159
n
159
GLU
159
A
THR
160
n
160
THR
160
A
GLY
161
n
161
GLY
161
A
ILE
162
n
162
ILE
162
A
SER
163
n
163
SER
163
A
PHE
164
n
164
PHE
164
A
THR
165
n
165
THR
165
A
GLU
166
n
166
GLU
166
A
PHE
167
n
167
PHE
167
A
SER
168
n
168
SER
168
A
TYR
169
n
169
TYR
169
A
MET
170
n
170
MET
170
A
MET
171
n
171
MET
171
A
LEU
172
n
172
LEU
172
A
GLN
173
n
173
GLN
173
A
ALA
174
n
174
ALA
174
A
TYR
175
n
175
TYR
175
A
ASP
176
n
176
ASP
176
A
PHE
177
n
177
PHE
177
A
LEU
178
n
178
LEU
178
A
ARG
179
n
179
ARG
179
A
LEU
180
n
180
LEU
180
A
TYR
181
n
181
TYR
181
A
GLU
182
n
182
GLU
182
A
THR
183
n
183
THR
183
A
GLU
184
n
184
GLU
184
A
GLY
185
n
185
GLY
185
A
CYS
186
n
186
CYS
186
A
ARG
187
n
187
ARG
187
A
LEU
188
n
188
LEU
188
A
GLN
189
n
189
GLN
189
A
ILE
190
n
190
ILE
190
A
GLY
191
n
191
GLY
191
A
GLY
192
n
192
GLY
192
A
SER
193
n
193
SER
193
A
ASP
194
n
194
ASP
194
A
GLN
195
n
195
GLN
195
A
TRP
196
n
196
TRP
196
A
GLY
197
n
197
GLY
197
A
ASN
198
n
198
ASN
198
A
ILE
199
n
199
ILE
199
A
THR
200
n
200
THR
200
A
ALA
201
n
201
ALA
201
A
GLY
202
n
202
GLY
202
A
LEU
203
n
203
LEU
203
A
GLU
204
n
204
GLU
204
A
LEU
205
n
205
LEU
205
A
ILE
206
n
206
ILE
206
A
ARG
207
n
207
ARG
207
A
LYS
208
n
208
LYS
208
A
THR
209
n
209
THR
209
A
LYS
210
n
210
LYS
210
A
GLY
211
n
211
GLY
211
A
n
212
212
A
n
213
213
A
ARG
214
n
214
ARG
214
A
ALA
215
n
215
ALA
215
A
PHE
216
n
216
PHE
216
A
GLY
217
n
217
GLY
217
A
LEU
218
n
218
LEU
218
A
THR
219
n
219
THR
219
A
ILE
220
n
220
ILE
220
A
PRO
221
n
221
PRO
221
A
LEU
222
n
222
LEU
222
A
VAL
223
n
223
VAL
223
A
THR
224
n
224
THR
224
A
LYS
225
n
225
LYS
225
A
ALA
226
n
226
ALA
226
A
ASP
227
n
227
ASP
227
A
GLY
228
n
228
GLY
228
A
THR
229
n
229
THR
229
A
LYS
230
n
230
LYS
230
A
PHE
231
n
231
PHE
231
A
GLY
232
n
232
GLY
232
A
LYS
233
n
233
LYS
233
A
THR
234
n
234
THR
234
A
GLU
235
n
235
GLU
235
A
SER
236
n
236
SER
236
A
GLY
237
n
237
GLY
237
A
THR
238
n
238
THR
238
A
ILE
239
n
239
ILE
239
A
TRP
240
n
240
TRP
240
A
LEU
241
n
241
LEU
241
A
ASP
242
n
242
ASP
242
A
LYS
243
n
243
LYS
243
A
GLU
244
n
244
GLU
244
A
LYS
245
n
245
LYS
245
A
THR
246
n
246
THR
246
A
SER
247
n
247
SER
247
A
PRO
248
n
248
PRO
248
A
TYR
249
n
249
TYR
249
A
GLU
250
n
250
GLU
250
A
PHE
251
n
251
PHE
251
A
TYR
252
n
252
TYR
252
A
GLN
253
n
253
GLN
253
A
PHE
254
n
254
PHE
254
A
TRP
255
n
255
TRP
255
A
ILE
256
n
256
ILE
256
A
ASN
257
n
257
ASN
257
A
THR
258
n
258
THR
258
A
ASP
259
n
259
ASP
259
A
ASP
260
n
260
ASP
260
A
ARG
261
n
261
ARG
261
A
ASP
262
n
262
ASP
262
A
VAL
263
n
263
VAL
263
A
ILE
264
n
264
ILE
264
A
ARG
265
n
265
ARG
265
A
TYR
266
n
266
TYR
266
A
LEU
267
n
267
LEU
267
A
LYS
268
n
268
LYS
268
A
TYR
269
n
269
TYR
269
A
PHE
270
n
270
PHE
270
A
THR
271
n
271
THR
271
A
PHE
272
n
272
PHE
272
A
LEU
273
n
273
LEU
273
A
SER
274
n
274
SER
274
A
LYS
275
n
275
LYS
275
A
GLU
276
n
276
GLU
276
A
GLU
277
n
277
GLU
277
A
ILE
278
n
278
ILE
278
A
GLU
279
n
279
GLU
279
A
ALA
280
n
280
ALA
280
A
LEU
281
n
281
LEU
281
A
GLU
282
n
282
GLU
282
A
GLN
283
n
283
GLN
283
A
GLU
284
n
284
GLU
284
A
LEU
285
n
285
LEU
285
A
ARG
286
n
286
ARG
286
A
GLU
287
n
287
GLU
287
A
ALA
288
n
288
ALA
288
A
PRO
289
n
289
PRO
289
A
GLU
290
n
290
GLU
290
A
LYS
291
n
291
LYS
291
A
ARG
292
n
292
ARG
292
A
ALA
293
n
293
ALA
293
A
ALA
294
n
294
ALA
294
A
GLN
295
n
295
GLN
295
A
LYS
296
n
296
LYS
296
A
THR
297
n
297
THR
297
A
LEU
298
n
298
LEU
298
A
ALA
299
n
299
ALA
299
A
GLU
300
n
300
GLU
300
A
GLU
301
n
301
GLU
301
A
VAL
302
n
302
VAL
302
A
THR
303
n
303
THR
303
A
LYS
304
n
304
LYS
304
A
LEU
305
n
305
LEU
305
A
VAL
306
n
306
VAL
306
A
HIS
307
n
307
HIS
307
A
GLY
308
n
308
GLY
308
A
GLU
309
n
309
GLU
309
A
GLU
310
n
310
GLU
310
A
ALA
311
n
311
ALA
311
A
LEU
312
n
312
LEU
312
A
ARG
313
n
313
ARG
313
A
GLN
314
n
314
GLN
314
A
ALA
315
n
315
ALA
315
A
ILE
316
n
316
ILE
316
A
ARG
317
n
317
ARG
317
A
ILE
318
n
318
ILE
318
A
SER
319
n
319
SER
319
A
n
320
320
A
n
321
321
A
n
322
322
A
n
323
323
A
n
324
324
A
n
325
325
A
n
326
326
A
n
327
327
A
n
328
328
A
n
329
329
A
n
330
330
A
n
331
331
A
n
332
332
A
n
333
333
A
n
334
334
A
n
335
335
A
n
336
336
A
n
337
337
A
n
338
338
A
n
339
339
A
n
340
340
A
n
341
341
A
n
342
342
A
n
343
343
A
n
344
344
A
n
345
345
A
n
346
346
A
n
347
347
A
n
348
348
A
n
349
349
A
n
350
350
A
n
351
351
A
n
352
352
A
n
353
353
A
n
354
354
A
n
355
355
A
n
356
356
A
n
357
357
A
n
358
358
A
n
359
359
A
n
360
360
A
n
361
361
A
n
362
362
A
n
363
363
A
n
364
364
A
n
365
365
A
n
366
366
A
n
367
367
A
n
368
368
A
n
369
369
A
n
370
370
A
n
371
371
A
n
372
372
A
n
373
373
A
n
374
374
A
n
375
375
A
n
376
376
A
n
377
377
A
n
378
378
A
n
379
379
A
n
380
380
A
n
381
381
A
n
382
382
A
n
383
383
A
n
384
384
A
n
385
385
A
n
386
386
A
n
387
387
A
n
388
388
A
n
389
389
A
n
390
390
A
n
391
391
A
n
392
392
A
n
393
393
A
n
394
394
A
n
395
395
A
n
396
396
A
n
397
397
A
n
398
398
A
n
399
399
A
n
400
400
A
n
401
401
A
n
402
402
A
n
403
403
A
n
404
404
A
n
405
405
A
n
406
406
A
n
407
407
A
n
408
408
A
n
409
409
A
n
410
410
A
n
411
411
A
n
412
412
A
n
413
413
A
n
414
414
A
n
415
415
A
n
416
416
A
n
417
417
A
n
418
418
A
n
419
419
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
3050
-25
25980
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLN
15
A
O
GLN
15
A
N
THR
219
A
N
THR
219
A
N
LEU
218
A
N
LEU
218
A
O
GLN
189
A
O
GLN
189
A
O
LEU
188
A
O
LEU
188
A
N
TYR
34
A
N
TYR
34
A
N
CYS
35
A
N
CYS
35
A
O
ILE
66
A
O
ILE
66
A
O
ALA
67
A
O
ALA
67
A
N
LYS
121
A
N
LYS
121
1
A
CB
MET
1
A
CB
MET
1
1
Y
1
A
CG
MET
1
A
CG
MET
1
1
Y
1
A
SD
MET
1
A
SD
MET
1
1
Y
1
A
CE
MET
1
A
CE
MET
1
1
Y
1
A
CG
ASP
20
A
CG
ASP
20
1
Y
1
A
OD1
ASP
20
A
OD1
ASP
20
1
Y
1
A
OD2
ASP
20
A
OD2
ASP
20
1
Y
1
A
CG
ARG
30
A
CG
ARG
30
1
Y
1
A
CD
ARG
30
A
CD
ARG
30
1
Y
1
A
NE
ARG
30
A
NE
ARG
30
1
Y
1
A
CZ
ARG
30
A
CZ
ARG
30
1
Y
1
A
NH1
ARG
30
A
NH1
ARG
30
1
Y
1
A
NH2
ARG
30
A
NH2
ARG
30
1
Y
1
A
CG
ARG
86
A
CG
ARG
86
1
Y
1
A
CD
ARG
86
A
CD
ARG
86
1
Y
1
A
NE
ARG
86
A
NE
ARG
86
1
Y
1
A
CZ
ARG
86
A
CZ
ARG
86
1
Y
1
A
NH1
ARG
86
A
NH1
ARG
86
1
Y
1
A
NH2
ARG
86
A
NH2
ARG
86
1
Y
1
A
CD
LYS
91
A
CD
LYS
91
1
Y
1
A
CE
LYS
91
A
CE
LYS
91
1
Y
1
A
NZ
LYS
91
A
NZ
LYS
91
1
Y
1
A
CG
GLU
92
A
CG
GLU
92
1
Y
1
A
CD
GLU
92
A
CD
GLU
92
1
Y
1
A
OE1
GLU
92
A
OE1
GLU
92
1
Y
1
A
OE2
GLU
92
A
OE2
GLU
92
1
Y
1
A
CG
GLU
103
A
CG
GLU
103
1
Y
1
A
CD
GLU
103
A
CD
GLU
103
1
Y
1
A
OE1
GLU
103
A
OE1
GLU
103
1
Y
1
A
OE2
GLU
103
A
OE2
GLU
103
1
Y
1
A
CG
GLU
112
A
CG
GLU
112
1
Y
1
A
CD
GLU
112
A
CD
GLU
112
1
Y
1
A
OE1
GLU
112
A
OE1
GLU
112
1
Y
1
A
OE2
GLU
112
A
OE2
GLU
112
1
Y
1
A
CG1
ILE
158
A
CG1
ILE
158
1
Y
1
A
CG2
ILE
158
A
CG2
ILE
158
1
Y
1
A
CD1
ILE
158
A
CD1
ILE
158
1
Y
1
A
CG
GLU
159
A
CG
GLU
159
1
Y
1
A
CD
GLU
159
A
CD
GLU
159
1
Y
1
A
OE1
GLU
159
A
OE1
GLU
159
1
Y
1
A
OE2
GLU
159
A
OE2
GLU
159
1
Y
1
A
OG1
THR
160
A
OG1
THR
160
1
Y
1
A
CG2
THR
160
A
CG2
THR
160
1
Y
1
A
CG
ARG
214
A
CG
ARG
214
1
Y
1
A
CD
ARG
214
A
CD
ARG
214
1
Y
1
A
NE
ARG
214
A
NE
ARG
214
1
Y
1
A
CZ
ARG
214
A
CZ
ARG
214
1
Y
1
A
NH1
ARG
214
A
NH1
ARG
214
1
Y
1
A
NH2
ARG
214
A
NH2
ARG
214
1
Y
1
A
CD
LYS
230
A
CD
LYS
230
1
Y
1
A
CE
LYS
230
A
CE
LYS
230
1
Y
1
A
NZ
LYS
230
A
NZ
LYS
230
1
Y
1
A
CG
LYS
233
A
CG
LYS
233
1
Y
1
A
CD
LYS
233
A
CD
LYS
233
1
Y
1
A
CE
LYS
233
A
CE
LYS
233
1
Y
1
A
NZ
LYS
233
A
NZ
LYS
233
1
Y
1
A
CG
GLU
235
A
CG
GLU
235
1
Y
1
A
CD
GLU
235
A
CD
GLU
235
1
Y
1
A
OE1
GLU
235
A
OE1
GLU
235
1
Y
1
A
OE2
GLU
235
A
OE2
GLU
235
1
Y
1
A
OG
SER
236
A
OG
SER
236
1
Y
1
A
CD
GLU
276
A
CD
GLU
276
1
Y
1
A
OE1
GLU
276
A
OE1
GLU
276
1
Y
1
A
OE2
GLU
276
A
OE2
GLU
276
1
Y
1
A
CG
GLU
284
A
CG
GLU
284
1
Y
1
A
CD
GLU
284
A
CD
GLU
284
1
Y
1
A
OE1
GLU
284
A
OE1
GLU
284
1
Y
1
A
OE2
GLU
284
A
OE2
GLU
284
1
Y
1
A
CD
GLU
287
A
CD
GLU
287
1
Y
1
A
OE1
GLU
287
A
OE1
GLU
287
1
Y
1
A
OE2
GLU
287
A
OE2
GLU
287
1
Y
1
A
CG
GLU
290
A
CG
GLU
290
1
Y
1
A
CD
GLU
290
A
CD
GLU
290
1
Y
1
A
OE1
GLU
290
A
OE1
GLU
290
1
Y
1
A
OE2
GLU
290
A
OE2
GLU
290
1
Y
1
A
CD
LYS
291
A
CD
LYS
291
1
Y
1
A
CE
LYS
291
A
CE
LYS
291
1
Y
1
A
NZ
LYS
291
A
NZ
LYS
291
1
Y
1
A
CD
LYS
296
A
CD
LYS
296
1
Y
1
A
CE
LYS
296
A
CE
LYS
296
1
Y
1
A
NZ
LYS
296
A
NZ
LYS
296
1
Y
1
A
CG
GLU
310
A
CG
GLU
310
1
Y
1
A
CD
GLU
310
A
CD
GLU
310
1
Y
1
A
OE1
GLU
310
A
OE1
GLU
310
1
Y
1
A
OE2
GLU
310
A
OE2
GLU
310
1
Y
1
A
OG
SER
319
A
OG
SER
319
1
Y
1
A
GLU
212
A
GLU
212
1
Y
1
A
ALA
213
A
ALA
213
1
Y
1
A
GLU
320
A
GLU
320
1
Y
1
A
ALA
321
A
ALA
321
1
Y
1
A
LEU
322
A
LEU
322
1
Y
1
A
PHE
323
A
PHE
323
1
Y
1
A
SER
324
A
SER
324
1
Y
1
A
GLY
325
A
GLY
325
1
Y
1
A
ASP
326
A
ASP
326
1
Y
1
A
ILE
327
A
ILE
327
1
Y
1
A
ALA
328
A
ALA
328
1
Y
1
A
ASN
329
A
ASN
329
1
Y
1
A
LEU
330
A
LEU
330
1
Y
1
A
THR
331
A
THR
331
1
Y
1
A
ALA
332
A
ALA
332
1
Y
1
A
ALA
333
A
ALA
333
1
Y
1
A
GLU
334
A
GLU
334
1
Y
1
A
ILE
335
A
ILE
335
1
Y
1
A
GLU
336
A
GLU
336
1
Y
1
A
GLN
337
A
GLN
337
1
Y
1
A
GLY
338
A
GLY
338
1
Y
1
A
PHE
339
A
PHE
339
1
Y
1
A
LYS
340
A
LYS
340
1
Y
1
A
ASP
341
A
ASP
341
1
Y
1
A
VAL
342
A
VAL
342
1
Y
1
A
PRO
343
A
PRO
343
1
Y
1
A
SER
344
A
SER
344
1
Y
1
A
PHE
345
A
PHE
345
1
Y
1
A
VAL
346
A
VAL
346
1
Y
1
A
HIS
347
A
HIS
347
1
Y
1
A
GLU
348
A
GLU
348
1
Y
1
A
GLY
349
A
GLY
349
1
Y
1
A
GLY
350
A
GLY
350
1
Y
1
A
ASP
351
A
ASP
351
1
Y
1
A
VAL
352
A
VAL
352
1
Y
1
A
PRO
353
A
PRO
353
1
Y
1
A
LEU
354
A
LEU
354
1
Y
1
A
VAL
355
A
VAL
355
1
Y
1
A
GLU
356
A
GLU
356
1
Y
1
A
LEU
357
A
LEU
357
1
Y
1
A
LEU
358
A
LEU
358
1
Y
1
A
VAL
359
A
VAL
359
1
Y
1
A
SER
360
A
SER
360
1
Y
1
A
ALA
361
A
ALA
361
1
Y
1
A
GLY
362
A
GLY
362
1
Y
1
A
ILE
363
A
ILE
363
1
Y
1
A
SER
364
A
SER
364
1
Y
1
A
PRO
365
A
PRO
365
1
Y
1
A
SER
366
A
SER
366
1
Y
1
A
LYS
367
A
LYS
367
1
Y
1
A
ARG
368
A
ARG
368
1
Y
1
A
GLN
369
A
GLN
369
1
Y
1
A
ALA
370
A
ALA
370
1
Y
1
A
ARG
371
A
ARG
371
1
Y
1
A
GLU
372
A
GLU
372
1
Y
1
A
ASP
373
A
ASP
373
1
Y
1
A
ILE
374
A
ILE
374
1
Y
1
A
GLN
375
A
GLN
375
1
Y
1
A
ASN
376
A
ASN
376
1
Y
1
A
GLY
377
A
GLY
377
1
Y
1
A
ALA
378
A
ALA
378
1
Y
1
A
ILE
379
A
ILE
379
1
Y
1
A
TYR
380
A
TYR
380
1
Y
1
A
VAL
381
A
VAL
381
1
Y
1
A
ASN
382
A
ASN
382
1
Y
1
A
GLY
383
A
GLY
383
1
Y
1
A
GLU
384
A
GLU
384
1
Y
1
A
ARG
385
A
ARG
385
1
Y
1
A
LEU
386
A
LEU
386
1
Y
1
A
GLN
387
A
GLN
387
1
Y
1
A
ASP
388
A
ASP
388
1
Y
1
A
VAL
389
A
VAL
389
1
Y
1
A
GLY
390
A
GLY
390
1
Y
1
A
ALA
391
A
ALA
391
1
Y
1
A
ILE
392
A
ILE
392
1
Y
1
A
LEU
393
A
LEU
393
1
Y
1
A
THR
394
A
THR
394
1
Y
1
A
ALA
395
A
ALA
395
1
Y
1
A
GLU
396
A
GLU
396
1
Y
1
A
HIS
397
A
HIS
397
1
Y
1
A
ARG
398
A
ARG
398
1
Y
1
A
LEU
399
A
LEU
399
1
Y
1
A
GLU
400
A
GLU
400
1
Y
1
A
GLY
401
A
GLY
401
1
Y
1
A
ARG
402
A
ARG
402
1
Y
1
A
PHE
403
A
PHE
403
1
Y
1
A
THR
404
A
THR
404
1
Y
1
A
VAL
405
A
VAL
405
1
Y
1
A
ILE
406
A
ILE
406
1
Y
1
A
ARG
407
A
ARG
407
1
Y
1
A
ARG
408
A
ARG
408
1
Y
1
A
GLY
409
A
GLY
409
1
Y
1
A
LYS
410
A
LYS
410
1
Y
1
A
LYS
411
A
LYS
411
1
Y
1
A
LYS
412
A
LYS
412
1
Y
1
A
TYR
413
A
TYR
413
1
Y
1
A
TYR
414
A
TYR
414
1
Y
1
A
LEU
415
A
LEU
415
1
Y
1
A
ILE
416
A
ILE
416
1
Y
1
A
ARG
417
A
ARG
417
1
Y
1
A
TYR
418
A
TYR
418
1
Y
1
A
ALA
419
A
ALA
419
1
Y
1
5.05
0.50
120.30
125.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
10
10
10
N
1
5.38
0.50
120.30
125.68
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
1
-6.69
0.50
120.30
113.61
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
23
23
23
N
1
15.70
2.20
113.40
129.10
A
A
A
CA
CB
CG
GLU
GLU
GLU
28
28
28
N
1
11.37
1.80
110.60
121.97
A
A
A
N
CA
CB
ARG
ARG
ARG
30
30
30
N
1
-6.21
0.90
118.30
112.09
A
A
A
CB
CG
OD1
ASP
ASP
ASP
38
38
38
N
1
11.83
1.40
110.10
121.93
A
A
A
N
CA
CB
ALA
ALA
ALA
41
41
41
N
1
8.54
1.10
119.40
127.94
A
A
A
NH1
CZ
NH2
ARG
ARG
ARG
56
56
56
N
1
-6.69
0.50
120.30
113.61
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
56
56
56
N
1
3.22
0.50
120.30
123.52
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
57
57
57
N
1
-3.63
0.50
120.30
116.67
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
57
57
57
N
1
14.50
1.40
123.60
138.10
A
A
A
CD
NE
CZ
ARG
ARG
ARG
64
64
64
N
1
7.17
0.50
120.30
127.47
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
64
64
64
N
1
8.57
1.20
123.30
131.87
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
85
85
85
N
1
9.29
0.90
118.30
127.59
A
A
A
CB
CG
OD1
ASP
ASP
ASP
110
110
110
N
1
6.47
0.90
118.30
124.77
A
A
A
CB
CG
OD1
ASP
ASP
ASP
125
125
125
N
1
5.71
0.90
118.30
124.01
A
A
A
CB
CG
OD1
ASP
ASP
ASP
131
131
131
N
1
12.54
1.40
123.60
136.14
A
A
A
CD
NE
CZ
ARG
ARG
ARG
137
137
137
N
1
4.94
0.50
120.30
125.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
137
137
137
N
1
5.53
0.50
120.30
125.83
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
157
157
157
N
1
-7.09
0.50
120.30
113.21
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
157
157
157
N
1
17.17
2.70
111.00
128.17
A
A
A
N
CA
C
ARG
ARG
ARG
157
157
157
N
1
-4.78
0.60
121.00
116.22
A
A
A
CB
CG
CD1
TYR
TYR
TYR
169
169
169
N
1
11.24
1.70
113.30
124.54
A
A
A
CA
CB
CG
MET
MET
MET
171
171
171
N
1
5.43
0.50
120.30
125.73
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
179
179
179
N
1
-4.47
0.50
120.30
115.83
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
179
179
179
N
1
-8.97
1.40
123.60
114.63
A
A
A
CD
NE
CZ
ARG
ARG
ARG
187
187
187
N
1
6.44
0.90
118.30
124.74
A
A
A
CB
CG
OD2
ASP
ASP
ASP
194
194
194
N
1
3.22
0.50
120.30
123.52
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
207
207
207
N
1
-11.23
1.80
110.60
99.37
A
A
A
N
CA
CB
ARG
ARG
ARG
214
214
214
N
1
6.07
0.90
118.30
124.37
A
A
A
CB
CG
OD1
ASP
ASP
ASP
227
227
227
N
1
6.90
0.90
118.30
125.20
A
A
A
CB
CG
OD2
ASP
ASP
ASP
259
259
259
N
1
15.63
2.10
111.80
127.43
A
A
A
CG
CD
NE
ARG
ARG
ARG
261
261
261
N
1
9.17
1.40
123.60
132.77
A
A
A
CD
NE
CZ
ARG
ARG
ARG
261
261
261
N
1
6.00
0.50
120.30
126.30
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
261
261
261
N
1
-5.30
0.50
120.30
115.00
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
261
261
261
N
1
18.29
2.60
111.60
129.89
A
A
A
CB
CG
CD
GLN
GLN
GLN
283
283
283
N
1
-4.04
0.50
120.30
116.26
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
286
286
286
N
1
5.23
0.50
120.30
125.53
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
292
292
292
N
1
-11.17
1.70
111.00
99.83
A
A
A
CB
CG
CD2
LEU
LEU
LEU
298
298
298
N
1
10.72
1.40
123.60
134.32
A
A
A
CD
NE
CZ
ARG
ARG
ARG
313
313
313
N
1
4.51
0.50
120.30
124.81
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
313
313
313
N
1
A
ASP
18
-172.17
100.80
1
A
SER
156
-38.16
-30.38
0.2280000
2.3
24432
1
2.3
110
2567
0
0
2457
0.018
0.03
0.044
0.04
0.047
0.05
2.68
1.75
3.76
2.25
3.87
2.00
5.40
2.50
0.013
0.02
0.140
0.15
0.19
0.30
0.27
0.30
9.7
15.0
refinement
PROLSQ
STRUCTURE OF TYROSYL-T/RNA SYNTHETASE REFINED AT 2.3 ANGSTROMS RESOLUTION. INTERACTION OF THE ENZYME WITH THE TYROSYL ADENYLATE INTERMEDIATE
1
N
N
2
N
N
A
ASP
2
A
ASP
2
HELX_P
A
ARG
10
A
ARG
10
1
H1
9
A
GLU
19
A
GLU
19
HELX_P
A
GLU
28
A
GLU
28
1
H2
10
A
LEU
49
A
LEU
49
HELX_P
A
GLN
60
A
GLN
60
1
H3
12
A
THR
73
A
THR
73
HELX_P
A
LEU
75
A
LEU
75
5
H4
3
A
LYS
91
A
LYS
91
HELX_P
A
LEU
105
A
LEU
105
1
H5
15
A
TYR
124
A
TYR
124
HELX_P
A
ILE
127
A
ILE
127
1
H6
4
A
VAL
132
A
VAL
132
HELX_P
A
ASP
138
A
ASP
138
1
H7
7
A
GLY
140
A
GLY
140
HELX_P
A
HIS
142
A
HIS
142
5
H
3
A
VAL
145
A
VAL
145
HELX_P
A
MET
149
A
MET
149
1
H8
5
A
GLU
152
A
GLU
152
HELX_P
A
GLN
155
A
GLN
155
1
H9
4
A
PHE
164
A
PHE
164
HELX_P
A
GLU
184
A
GLU
184
1
H10
21
A
TRP
196
A
TRP
196
HELX_P
A
LYS
210
A
LYS
210
1
H11
15
A
PRO
248
A
PRO
248
HELX_P
A
ILE
256
A
ILE
256
1
H1*
9
A
VAL
263
A
VAL
263
HELX_P
A
PHE
270
A
PHE
270
1
H2*
8
A
LYS
275
A
LYS
275
HELX_P
A
GLU
287
A
GLU
287
1
H3*
13
A
ALA
293
A
ALA
293
HELX_P
A
VAL
306
A
VAL
306
1
H4*
14
A
GLU
309
A
GLU
309
HELX_P
A
ILE
318
A
ILE
318
1
H5*
10
LIGASE (SYNTHETASE)
LIGASE (SYNTHETASE)
SYY_BACST
UNP
1
1
P00952
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPS
GKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIET
GISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRISE
ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLE
GRFTVIRRGKKKYYLIRYA
1
419
2TS1
1
419
P00952
A
1
1
419
6
anti-parallel
parallel
parallel
parallel
parallel
A
GLN
15
A
GLN
15
A
THR
16
A
THR
16
A
PHE
216
A
PHE
216
A
ILE
220
A
ILE
220
A
ARG
187
A
ARG
187
A
GLY
192
A
GLY
192
A
THR
32
A
THR
32
A
PHE
37
A
PHE
37
A
ARG
64
A
ARG
64
A
VAL
69
A
VAL
69
A
LYS
119
A
LYS
119
A
ASN
122
A
ASN
122
152
P 31 2 1