0.015868
0.000000
0.000000
0.000000
0.015868
0.000000
0.000000
0.000000
0.002289
0.00000
0.00000
0.00000
Grubisha, O.
Duquerroy, S.
Cordier, F.
Haouz, A.
Delepierre, M.
Veron, M.
Agou, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
63.020
63.020
436.917
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
C
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
395
89
10.1016/J.JMB.2009.10.018
19854204
Darpin-Assisted Crystallography of the Cc2-Lz Domain of Nemo Reveals a Coupling between Dimerization and Ubiquitin-Binding.
2010
US
Protein Sci.
PRCIEI
0795
0961-8368
16
2013
10.1110/PS.072924907
17766391
Inhibition of NF-kappaB Activation with Designed Ankyrin-Repeat Proteins Targeting the Ubiquitin-Binding/Oligomerization Domain of Nemo.
2007
10.2210/pdb2v4h/pdb
pdb_00002v4h
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2007-11-02
DECTRIS PILATUS 6M
SI(111) MONOCHROMATOR
SINGLE WAVELENGTH
M
x-ray
1
1.1741
1.0
X06SA
SLS
1.1741
SYNCHROTRON
SLS BEAMLINE X06SA
12895.637
NF-KAPPA-B ESSENTIAL MODULATOR
CC2-LZ DOMAIN, RESIDUES 251-337
2
man
polymer
SEE SECONDARY REFERENCE
14924.489
1D5 DARPIN
2
man
polymer
18.015
water
51
nat
water
NF-KAPPA-B ESSENTIAL MODIFIER, INHIBITOR OF NUCLEAR FACTOR KAPPA-B KINASE SUBUNIT GAMMA, IKB KINASE-ASSOCIATED PROTEIN 1, NEMO
no
no
MGSSHHHHHHSSGLVPRGSHMASMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQA
ERHAREKLVEKKEYLQEQLEQLQREFNKLK
MGSSHHHHHHSSGLVPRGSHMASMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQA
ERHAREKLVEKKEYLQEQLEQLQREFNKLK
A,B
polypeptide(L)
no
no
HHHHHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG
STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN
HHHHHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG
STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HOUSE MOUSE
sample
10090
MUS MUSCULUS
469008
ESCHERICHIA COLI
BL21(DE3)
PET28B
sample
32630
SYNTHETIC CONSTRUCT
562
ESCHERICHIA COLI
XL1-BLUE
PQE-30
1
3.92
68.58
THEORETICAL MODEL OF NEMO CC2 AND LZ HELICES USED FOR MOLECULAR REPLACEMENT
7.5
5% MPD, 5% ETHANOL, 100 MM HEPES, PH 7.5
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_ncs_dom_lim
repository
Initial release
Advisory
Refinement description
Version format compliance
Source and taxonomy
Structure summary
Data collection
Database references
Other
Refinement description
1
0
2009-11-03
1
1
2011-07-13
1
2
2016-12-21
1
3
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.beg_label_asym_id
_struct_ncs_dom_lim.beg_label_comp_id
_struct_ncs_dom_lim.beg_label_seq_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ncs_dom_lim.end_label_asym_id
_struct_ncs_dom_lim.end_label_comp_id
_struct_ncs_dom_lim.end_label_seq_id
PDBE
Y
PDBE
2008-09-22
REL
REL
HOH
water
CHAINS C AND D CORRESPOND TO GENBANK REFERENCE AY326425 OR
GENPEPT REFERENCE AAQ93812.
THE MUTATIONS INTRODUCED IN CHAINS C AND D ARE DESCRIBED
BELOW:
DESIGNED DARPIN TARGETING NEMO CC2-LZ DOMAIN MUTATIONS 43N-
45R-46K-48N-56D-57Y-58D-69H- 76H-78N-79D-81S-89L-90F-102H
2JAB
PDB ENTRY 2JAB
PDB
experimental model
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2001
3
HOH
HOH
2001
B
HOH
2002
3
HOH
HOH
2002
B
HOH
2003
3
HOH
HOH
2003
B
HOH
2004
3
HOH
HOH
2004
B
HOH
2005
3
HOH
HOH
2005
B
HOH
2006
3
HOH
HOH
2006
B
HOH
2007
3
HOH
HOH
2007
B
HOH
2008
3
HOH
HOH
2008
B
HOH
2001
3
HOH
HOH
2001
C
HOH
2002
3
HOH
HOH
2002
C
HOH
2003
3
HOH
HOH
2003
C
HOH
2004
3
HOH
HOH
2004
C
HOH
2005
3
HOH
HOH
2005
C
HOH
2006
3
HOH
HOH
2006
C
HOH
2007
3
HOH
HOH
2007
C
HOH
2008
3
HOH
HOH
2008
C
HOH
2009
3
HOH
HOH
2009
C
HOH
2010
3
HOH
HOH
2010
C
HOH
2011
3
HOH
HOH
2011
C
HOH
2012
3
HOH
HOH
2012
C
HOH
2013
3
HOH
HOH
2013
C
HOH
2014
3
HOH
HOH
2014
C
HOH
2001
3
HOH
HOH
2001
D
HOH
2002
3
HOH
HOH
2002
D
HOH
2003
3
HOH
HOH
2003
D
HOH
2004
3
HOH
HOH
2004
D
HOH
2005
3
HOH
HOH
2005
D
HOH
2006
3
HOH
HOH
2006
D
HOH
2007
3
HOH
HOH
2007
D
HOH
2008
3
HOH
HOH
2008
D
HOH
2009
3
HOH
HOH
2009
D
HOH
2010
3
HOH
HOH
2010
D
HOH
2011
3
HOH
HOH
2011
D
HOH
2012
3
HOH
HOH
2012
D
HOH
2013
3
HOH
HOH
2013
D
HOH
2014
3
HOH
HOH
2014
D
HOH
2015
3
HOH
HOH
2015
D
HOH
2016
3
HOH
HOH
2016
D
HOH
2017
3
HOH
HOH
2017
D
HOH
2018
3
HOH
HOH
2018
D
HOH
2019
3
HOH
HOH
2019
D
n
1
228
A
n
2
229
A
n
3
230
A
n
4
231
A
n
5
232
A
n
6
233
A
n
7
234
A
n
8
235
A
n
9
236
A
n
10
237
A
n
11
238
A
n
12
239
A
GLY
240
n
13
GLY
240
A
LEU
241
n
14
LEU
241
A
VAL
242
n
15
VAL
242
A
PRO
243
n
16
PRO
243
A
ARG
244
n
17
ARG
244
A
GLY
245
n
18
GLY
245
A
SER
246
n
19
SER
246
A
HIS
247
n
20
HIS
247
A
MET
248
n
21
MET
248
A
ALA
249
n
22
ALA
249
A
SER
250
n
23
SER
250
A
MET
251
n
24
MET
251
A
GLN
252
n
25
GLN
252
A
LEU
253
n
26
LEU
253
A
GLU
254
n
27
GLU
254
A
ASP
255
n
28
ASP
255
A
LEU
256
n
29
LEU
256
A
ARG
257
n
30
ARG
257
A
GLN
258
n
31
GLN
258
A
GLN
259
n
32
GLN
259
A
LEU
260
n
33
LEU
260
A
GLN
261
n
34
GLN
261
A
GLN
262
n
35
GLN
262
A
ALA
263
n
36
ALA
263
A
GLU
264
n
37
GLU
264
A
GLU
265
n
38
GLU
265
A
ALA
266
n
39
ALA
266
A
LEU
267
n
40
LEU
267
A
VAL
268
n
41
VAL
268
A
ALA
269
n
42
ALA
269
A
LYS
270
n
43
LYS
270
A
GLN
271
n
44
GLN
271
A
GLU
272
n
45
GLU
272
A
LEU
273
n
46
LEU
273
A
ILE
274
n
47
ILE
274
A
ASP
275
n
48
ASP
275
A
LYS
276
n
49
LYS
276
A
LEU
277
n
50
LEU
277
A
LYS
278
n
51
LYS
278
A
GLU
279
n
52
GLU
279
A
GLU
280
n
53
GLU
280
A
ALA
281
n
54
ALA
281
A
GLU
282
n
55
GLU
282
A
GLN
283
n
56
GLN
283
A
HIS
284
n
57
HIS
284
A
LYS
285
n
58
LYS
285
A
ILE
286
n
59
ILE
286
A
VAL
287
n
60
VAL
287
A
MET
288
n
61
MET
288
A
GLU
289
n
62
GLU
289
A
THR
290
n
63
THR
290
A
VAL
291
n
64
VAL
291
A
PRO
292
n
65
PRO
292
A
VAL
293
n
66
VAL
293
A
LEU
294
n
67
LEU
294
A
LYS
295
n
68
LYS
295
A
ALA
296
n
69
ALA
296
A
GLN
297
n
70
GLN
297
A
ALA
298
n
71
ALA
298
A
ASP
299
n
72
ASP
299
A
ILE
300
n
73
ILE
300
A
TYR
301
n
74
TYR
301
A
LYS
302
n
75
LYS
302
A
ALA
303
n
76
ALA
303
A
ASP
304
n
77
ASP
304
A
PHE
305
n
78
PHE
305
A
GLN
306
n
79
GLN
306
A
ALA
307
n
80
ALA
307
A
GLU
308
n
81
GLU
308
A
ARG
309
n
82
ARG
309
A
HIS
310
n
83
HIS
310
A
ALA
311
n
84
ALA
311
A
ARG
312
n
85
ARG
312
A
GLU
313
n
86
GLU
313
A
LYS
314
n
87
LYS
314
A
LEU
315
n
88
LEU
315
A
VAL
316
n
89
VAL
316
A
GLU
317
n
90
GLU
317
A
LYS
318
n
91
LYS
318
A
LYS
319
n
92
LYS
319
A
GLU
320
n
93
GLU
320
A
TYR
321
n
94
TYR
321
A
LEU
322
n
95
LEU
322
A
GLN
323
n
96
GLN
323
A
GLU
324
n
97
GLU
324
A
GLN
325
n
98
GLN
325
A
LEU
326
n
99
LEU
326
A
GLU
327
n
100
GLU
327
A
GLN
328
n
101
GLN
328
A
LEU
329
n
102
LEU
329
A
GLN
330
n
103
GLN
330
A
ARG
331
n
104
ARG
331
A
GLU
332
n
105
GLU
332
A
PHE
333
n
106
PHE
333
A
ASN
334
n
107
ASN
334
A
LYS
335
n
108
LYS
335
A
LEU
336
n
109
LEU
336
A
LYS
337
n
110
LYS
337
A
n
1
228
B
n
2
229
B
n
3
230
B
n
4
231
B
n
5
232
B
n
6
233
B
n
7
234
B
n
8
235
B
n
9
236
B
n
10
237
B
n
11
238
B
n
12
239
B
n
13
240
B
n
14
241
B
n
15
242
B
n
16
243
B
n
17
244
B
n
18
245
B
n
19
246
B
HIS
247
n
20
HIS
247
B
MET
248
n
21
MET
248
B
ALA
249
n
22
ALA
249
B
SER
250
n
23
SER
250
B
MET
251
n
24
MET
251
B
GLN
252
n
25
GLN
252
B
LEU
253
n
26
LEU
253
B
GLU
254
n
27
GLU
254
B
ASP
255
n
28
ASP
255
B
LEU
256
n
29
LEU
256
B
ARG
257
n
30
ARG
257
B
GLN
258
n
31
GLN
258
B
GLN
259
n
32
GLN
259
B
LEU
260
n
33
LEU
260
B
GLN
261
n
34
GLN
261
B
GLN
262
n
35
GLN
262
B
ALA
263
n
36
ALA
263
B
GLU
264
n
37
GLU
264
B
GLU
265
n
38
GLU
265
B
ALA
266
n
39
ALA
266
B
LEU
267
n
40
LEU
267
B
VAL
268
n
41
VAL
268
B
ALA
269
n
42
ALA
269
B
LYS
270
n
43
LYS
270
B
GLN
271
n
44
GLN
271
B
GLU
272
n
45
GLU
272
B
LEU
273
n
46
LEU
273
B
ILE
274
n
47
ILE
274
B
ASP
275
n
48
ASP
275
B
LYS
276
n
49
LYS
276
B
LEU
277
n
50
LEU
277
B
LYS
278
n
51
LYS
278
B
GLU
279
n
52
GLU
279
B
GLU
280
n
53
GLU
280
B
ALA
281
n
54
ALA
281
B
GLU
282
n
55
GLU
282
B
GLN
283
n
56
GLN
283
B
HIS
284
n
57
HIS
284
B
LYS
285
n
58
LYS
285
B
ILE
286
n
59
ILE
286
B
VAL
287
n
60
VAL
287
B
MET
288
n
61
MET
288
B
GLU
289
n
62
GLU
289
B
THR
290
n
63
THR
290
B
VAL
291
n
64
VAL
291
B
PRO
292
n
65
PRO
292
B
VAL
293
n
66
VAL
293
B
LEU
294
n
67
LEU
294
B
LYS
295
n
68
LYS
295
B
ALA
296
n
69
ALA
296
B
GLN
297
n
70
GLN
297
B
ALA
298
n
71
ALA
298
B
ASP
299
n
72
ASP
299
B
ILE
300
n
73
ILE
300
B
TYR
301
n
74
TYR
301
B
LYS
302
n
75
LYS
302
B
ALA
303
n
76
ALA
303
B
ASP
304
n
77
ASP
304
B
PHE
305
n
78
PHE
305
B
GLN
306
n
79
GLN
306
B
ALA
307
n
80
ALA
307
B
GLU
308
n
81
GLU
308
B
ARG
309
n
82
ARG
309
B
HIS
310
n
83
HIS
310
B
ALA
311
n
84
ALA
311
B
ARG
312
n
85
ARG
312
B
GLU
313
n
86
GLU
313
B
LYS
314
n
87
LYS
314
B
LEU
315
n
88
LEU
315
B
VAL
316
n
89
VAL
316
B
GLU
317
n
90
GLU
317
B
LYS
318
n
91
LYS
318
B
LYS
319
n
92
LYS
319
B
GLU
320
n
93
GLU
320
B
TYR
321
n
94
TYR
321
B
LEU
322
n
95
LEU
322
B
GLN
323
n
96
GLN
323
B
GLU
324
n
97
GLU
324
B
GLN
325
n
98
GLN
325
B
LEU
326
n
99
LEU
326
B
GLU
327
n
100
GLU
327
B
GLN
328
n
101
GLN
328
B
LEU
329
n
102
LEU
329
B
GLN
330
n
103
GLN
330
B
ARG
331
n
104
ARG
331
B
GLU
332
n
105
GLU
332
B
PHE
333
n
106
PHE
333
B
ASN
334
n
107
ASN
334
B
LYS
335
n
108
LYS
335
B
LEU
336
n
109
LEU
336
B
LYS
337
n
110
LYS
337
B
n
1
1
C
n
2
2
C
n
3
3
C
n
4
4
C
n
5
5
C
n
6
6
C
n
7
7
C
n
8
8
C
n
9
9
C
n
10
10
C
n
11
11
C
SER
12
n
12
SER
12
C
ASP
13
n
13
ASP
13
C
LEU
14
n
14
LEU
14
C
GLY
15
n
15
GLY
15
C
LYS
16
n
16
LYS
16
C
LYS
17
n
17
LYS
17
C
LEU
18
n
18
LEU
18
C
LEU
19
n
19
LEU
19
C
GLU
20
n
20
GLU
20
C
ALA
21
n
21
ALA
21
C
ALA
22
n
22
ALA
22
C
ARG
23
n
23
ARG
23
C
ALA
24
n
24
ALA
24
C
GLY
25
n
25
GLY
25
C
GLN
26
n
26
GLN
26
C
ASP
27
n
27
ASP
27
C
ASP
28
n
28
ASP
28
C
GLU
29
n
29
GLU
29
C
VAL
30
n
30
VAL
30
C
ARG
31
n
31
ARG
31
C
ILE
32
n
32
ILE
32
C
LEU
33
n
33
LEU
33
C
MET
34
n
34
MET
34
C
ALA
35
n
35
ALA
35
C
ASN
36
n
36
ASN
36
C
GLY
37
n
37
GLY
37
C
ALA
38
n
38
ALA
38
C
ASP
39
n
39
ASP
39
C
VAL
40
n
40
VAL
40
C
ASN
41
n
41
ASN
41
C
ALA
42
n
42
ALA
42
C
ASN
43
n
43
ASN
43
C
ASP
44
n
44
ASP
44
C
ARG
45
n
45
ARG
45
C
LYS
46
n
46
LYS
46
C
GLY
47
n
47
GLY
47
C
ASN
48
n
48
ASN
48
C
THR
49
n
49
THR
49
C
PRO
50
n
50
PRO
50
C
LEU
51
n
51
LEU
51
C
HIS
52
n
52
HIS
52
C
LEU
53
n
53
LEU
53
C
ALA
54
n
54
ALA
54
C
ALA
55
n
55
ALA
55
C
ASP
56
n
56
ASP
56
C
TYR
57
n
57
TYR
57
C
ASP
58
n
58
ASP
58
C
HIS
59
n
59
HIS
59
C
LEU
60
n
60
LEU
60
C
GLU
61
n
61
GLU
61
C
ILE
62
n
62
ILE
62
C
VAL
63
n
63
VAL
63
C
GLU
64
n
64
GLU
64
C
VAL
65
n
65
VAL
65
C
LEU
66
n
66
LEU
66
C
LEU
67
n
67
LEU
67
C
LYS
68
n
68
LYS
68
C
HIS
69
n
69
HIS
69
C
GLY
70
n
70
GLY
70
C
ALA
71
n
71
ALA
71
C
ASP
72
n
72
ASP
72
C
VAL
73
n
73
VAL
73
C
ASN
74
n
74
ASN
74
C
ALA
75
n
75
ALA
75
C
HIS
76
n
76
HIS
76
C
ASP
77
n
77
ASP
77
C
ASN
78
n
78
ASN
78
C
ASP
79
n
79
ASP
79
C
GLY
80
n
80
GLY
80
C
SER
81
n
81
SER
81
C
THR
82
n
82
THR
82
C
PRO
83
n
83
PRO
83
C
LEU
84
n
84
LEU
84
C
HIS
85
n
85
HIS
85
C
LEU
86
n
86
LEU
86
C
ALA
87
n
87
ALA
87
C
ALA
88
n
88
ALA
88
C
LEU
89
n
89
LEU
89
C
PHE
90
n
90
PHE
90
C
GLY
91
n
91
GLY
91
C
HIS
92
n
92
HIS
92
C
LEU
93
n
93
LEU
93
C
GLU
94
n
94
GLU
94
C
ILE
95
n
95
ILE
95
C
VAL
96
n
96
VAL
96
C
GLU
97
n
97
GLU
97
C
VAL
98
n
98
VAL
98
C
LEU
99
n
99
LEU
99
C
LEU
100
n
100
LEU
100
C
LYS
101
n
101
LYS
101
C
HIS
102
n
102
HIS
102
C
GLY
103
n
103
GLY
103
C
ALA
104
n
104
ALA
104
C
ASP
105
n
105
ASP
105
C
VAL
106
n
106
VAL
106
C
ASN
107
n
107
ASN
107
C
ALA
108
n
108
ALA
108
C
GLN
109
n
109
GLN
109
C
ASP
110
n
110
ASP
110
C
LYS
111
n
111
LYS
111
C
PHE
112
n
112
PHE
112
C
GLY
113
n
113
GLY
113
C
LYS
114
n
114
LYS
114
C
THR
115
n
115
THR
115
C
ALA
116
n
116
ALA
116
C
PHE
117
n
117
PHE
117
C
ASP
118
n
118
ASP
118
C
ILE
119
n
119
ILE
119
C
SER
120
n
120
SER
120
C
ILE
121
n
121
ILE
121
C
ASP
122
n
122
ASP
122
C
ASN
123
n
123
ASN
123
C
GLY
124
n
124
GLY
124
C
ASN
125
n
125
ASN
125
C
GLU
126
n
126
GLU
126
C
ASP
127
n
127
ASP
127
C
LEU
128
n
128
LEU
128
C
ALA
129
n
129
ALA
129
C
GLU
130
n
130
GLU
130
C
ILE
131
n
131
ILE
131
C
LEU
132
n
132
LEU
132
C
GLN
133
n
133
GLN
133
C
LYS
134
n
134
LYS
134
C
LEU
135
n
135
LEU
135
C
ASN
136
n
136
ASN
136
C
n
1
1
D
n
2
2
D
n
3
3
D
n
4
4
D
n
5
5
D
n
6
6
D
n
7
7
D
n
8
8
D
HIS
9
n
9
HIS
9
D
HIS
10
n
10
HIS
10
D
GLY
11
n
11
GLY
11
D
SER
12
n
12
SER
12
D
ASP
13
n
13
ASP
13
D
LEU
14
n
14
LEU
14
D
GLY
15
n
15
GLY
15
D
LYS
16
n
16
LYS
16
D
LYS
17
n
17
LYS
17
D
LEU
18
n
18
LEU
18
D
LEU
19
n
19
LEU
19
D
GLU
20
n
20
GLU
20
D
ALA
21
n
21
ALA
21
D
ALA
22
n
22
ALA
22
D
ARG
23
n
23
ARG
23
D
ALA
24
n
24
ALA
24
D
GLY
25
n
25
GLY
25
D
GLN
26
n
26
GLN
26
D
ASP
27
n
27
ASP
27
D
ASP
28
n
28
ASP
28
D
GLU
29
n
29
GLU
29
D
VAL
30
n
30
VAL
30
D
ARG
31
n
31
ARG
31
D
ILE
32
n
32
ILE
32
D
LEU
33
n
33
LEU
33
D
MET
34
n
34
MET
34
D
ALA
35
n
35
ALA
35
D
ASN
36
n
36
ASN
36
D
GLY
37
n
37
GLY
37
D
ALA
38
n
38
ALA
38
D
ASP
39
n
39
ASP
39
D
VAL
40
n
40
VAL
40
D
ASN
41
n
41
ASN
41
D
ALA
42
n
42
ALA
42
D
ASN
43
n
43
ASN
43
D
ASP
44
n
44
ASP
44
D
ARG
45
n
45
ARG
45
D
LYS
46
n
46
LYS
46
D
GLY
47
n
47
GLY
47
D
ASN
48
n
48
ASN
48
D
THR
49
n
49
THR
49
D
PRO
50
n
50
PRO
50
D
LEU
51
n
51
LEU
51
D
HIS
52
n
52
HIS
52
D
LEU
53
n
53
LEU
53
D
ALA
54
n
54
ALA
54
D
ALA
55
n
55
ALA
55
D
ASP
56
n
56
ASP
56
D
TYR
57
n
57
TYR
57
D
ASP
58
n
58
ASP
58
D
HIS
59
n
59
HIS
59
D
LEU
60
n
60
LEU
60
D
GLU
61
n
61
GLU
61
D
ILE
62
n
62
ILE
62
D
VAL
63
n
63
VAL
63
D
GLU
64
n
64
GLU
64
D
VAL
65
n
65
VAL
65
D
LEU
66
n
66
LEU
66
D
LEU
67
n
67
LEU
67
D
LYS
68
n
68
LYS
68
D
HIS
69
n
69
HIS
69
D
GLY
70
n
70
GLY
70
D
ALA
71
n
71
ALA
71
D
ASP
72
n
72
ASP
72
D
VAL
73
n
73
VAL
73
D
ASN
74
n
74
ASN
74
D
ALA
75
n
75
ALA
75
D
HIS
76
n
76
HIS
76
D
ASP
77
n
77
ASP
77
D
ASN
78
n
78
ASN
78
D
ASP
79
n
79
ASP
79
D
GLY
80
n
80
GLY
80
D
SER
81
n
81
SER
81
D
THR
82
n
82
THR
82
D
PRO
83
n
83
PRO
83
D
LEU
84
n
84
LEU
84
D
HIS
85
n
85
HIS
85
D
LEU
86
n
86
LEU
86
D
ALA
87
n
87
ALA
87
D
ALA
88
n
88
ALA
88
D
LEU
89
n
89
LEU
89
D
PHE
90
n
90
PHE
90
D
GLY
91
n
91
GLY
91
D
HIS
92
n
92
HIS
92
D
LEU
93
n
93
LEU
93
D
GLU
94
n
94
GLU
94
D
ILE
95
n
95
ILE
95
D
VAL
96
n
96
VAL
96
D
GLU
97
n
97
GLU
97
D
VAL
98
n
98
VAL
98
D
LEU
99
n
99
LEU
99
D
LEU
100
n
100
LEU
100
D
LYS
101
n
101
LYS
101
D
HIS
102
n
102
HIS
102
D
GLY
103
n
103
GLY
103
D
ALA
104
n
104
ALA
104
D
ASP
105
n
105
ASP
105
D
VAL
106
n
106
VAL
106
D
ASN
107
n
107
ASN
107
D
ALA
108
n
108
ALA
108
D
GLN
109
n
109
GLN
109
D
ASP
110
n
110
ASP
110
D
LYS
111
n
111
LYS
111
D
PHE
112
n
112
PHE
112
D
GLY
113
n
113
GLY
113
D
LYS
114
n
114
LYS
114
D
THR
115
n
115
THR
115
D
ALA
116
n
116
ALA
116
D
PHE
117
n
117
PHE
117
D
ASP
118
n
118
ASP
118
D
ILE
119
n
119
ILE
119
D
SER
120
n
120
SER
120
D
ILE
121
n
121
ILE
121
D
ASP
122
n
122
ASP
122
D
ASN
123
n
123
ASN
123
D
GLY
124
n
124
GLY
124
D
ASN
125
n
125
ASN
125
D
GLU
126
n
126
GLU
126
D
ASP
127
n
127
ASP
127
D
LEU
128
n
128
LEU
128
D
ALA
129
n
129
ALA
129
D
GLU
130
n
130
GLU
130
D
ILE
131
n
131
ILE
131
D
LEU
132
n
132
LEU
132
D
GLN
133
n
133
GLN
133
D
LYS
134
n
134
LYS
134
D
LEU
135
n
135
LEU
135
D
ASN
136
n
136
ASN
136
D
9.3051
0.4699
3.3057
3.1577
0.4958
7.9121
-0.2021
-0.3084
0.3086
-0.1346
0.1312
0.2047
-0.6922
-1.3658
0.0710
-0.1093
0.2483
0.0045
0.2135
0.0450
-0.1277
refined
14.1830
58.9480
172.3550
X-RAY DIFFRACTION
2.4845
1.5493
-0.7726
7.1782
-2.2809
6.1966
-0.0407
0.3828
-0.1132
-0.4670
0.0507
-0.1598
-0.0529
-0.0027
-0.0099
-0.3002
0.0796
0.0129
-0.2499
-0.0303
-0.0991
refined
45.3760
55.5780
155.2180
X-RAY DIFFRACTION
3.2862
-2.6236
3.9563
5.6648
-6.0525
16.4604
-0.3431
0.0391
0.2752
0.1792
0.1425
0.0036
-0.7008
-0.4763
0.2005
-0.1073
0.0552
-0.0600
-0.2450
-0.0164
-0.1475
refined
32.9510
58.8360
167.6090
X-RAY DIFFRACTION
6.9619
-4.3764
8.4871
5.7053
-7.0463
20.2311
0.0993
0.3587
-0.3891
-0.3713
0.1907
0.3027
0.1868
-0.1409
-0.2901
-0.1798
-0.0354
-0.1115
-0.1583
-0.0876
-0.1364
refined
29.3960
53.9300
167.5410
X-RAY DIFFRACTION
2.6765
-2.6850
11.0871
2.9401
-9.6404
54.8359
0.3155
0.0602
-0.3083
-0.7044
0.3135
0.2448
0.9186
-0.3315
-0.6289
0.3833
0.1618
-0.0458
0.5278
0.1762
-0.1382
refined
52.4540
31.3520
223.3900
X-RAY DIFFRACTION
6.0369
-3.3457
6.7732
3.3287
-5.8785
14.2959
-0.0538
0.7380
0.3712
-0.6973
-0.8223
-0.8368
0.5028
1.6324
0.8762
0.5016
0.2328
-0.0181
0.6183
0.0808
0.0589
refined
60.1780
33.2850
224.8080
X-RAY DIFFRACTION
0.0131
-0.1491
0.7948
1.7032
-9.0755
48.3596
-0.3761
0.5494
-0.1931
-0.7649
0.8162
0.5755
-3.4832
2.3789
-0.4401
0.5113
0.1037
-0.0210
0.5449
0.2308
-0.0552
refined
58.7890
36.1870
245.3380
X-RAY DIFFRACTION
C
12
C
136
X-RAY DIFFRACTION
1
D
9
D
136
X-RAY DIFFRACTION
2
A
291
A
337
X-RAY DIFFRACTION
3
B
291
B
337
X-RAY DIFFRACTION
4
A
251
A
290
X-RAY DIFFRACTION
5
B
247
B
290
X-RAY DIFFRACTION
6
A
240
A
250
X-RAY DIFFRACTION
7
author_and_software_defined_assembly
PISA
8
octameric
22000
-173.5
55160
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
436.9170000000
1
A
MET
228
A
MET
1
1
Y
1
A
GLY
229
A
GLY
2
1
Y
1
A
SER
230
A
SER
3
1
Y
1
A
SER
231
A
SER
4
1
Y
1
A
HIS
232
A
HIS
5
1
Y
1
A
HIS
233
A
HIS
6
1
Y
1
A
HIS
234
A
HIS
7
1
Y
1
A
HIS
235
A
HIS
8
1
Y
1
A
HIS
236
A
HIS
9
1
Y
1
A
HIS
237
A
HIS
10
1
Y
1
A
SER
238
A
SER
11
1
Y
1
A
SER
239
A
SER
12
1
Y
1
B
MET
228
B
MET
1
1
Y
1
B
GLY
229
B
GLY
2
1
Y
1
B
SER
230
B
SER
3
1
Y
1
B
SER
231
B
SER
4
1
Y
1
B
HIS
232
B
HIS
5
1
Y
1
B
HIS
233
B
HIS
6
1
Y
1
B
HIS
234
B
HIS
7
1
Y
1
B
HIS
235
B
HIS
8
1
Y
1
B
HIS
236
B
HIS
9
1
Y
1
B
HIS
237
B
HIS
10
1
Y
1
B
SER
238
B
SER
11
1
Y
1
B
SER
239
B
SER
12
1
Y
1
B
GLY
240
B
GLY
13
1
Y
1
B
LEU
241
B
LEU
14
1
Y
1
B
VAL
242
B
VAL
15
1
Y
1
B
PRO
243
B
PRO
16
1
Y
1
B
ARG
244
B
ARG
17
1
Y
1
B
GLY
245
B
GLY
18
1
Y
1
B
SER
246
B
SER
19
1
Y
1
C
HIS
1
C
HIS
1
1
Y
1
C
HIS
2
C
HIS
2
1
Y
1
C
HIS
3
C
HIS
3
1
Y
1
C
HIS
4
C
HIS
4
1
Y
1
C
HIS
5
C
HIS
5
1
Y
1
C
HIS
6
C
HIS
6
1
Y
1
C
HIS
7
C
HIS
7
1
Y
1
C
HIS
8
C
HIS
8
1
Y
1
C
HIS
9
C
HIS
9
1
Y
1
C
HIS
10
C
HIS
10
1
Y
1
C
GLY
11
C
GLY
11
1
Y
1
D
HIS
1
D
HIS
1
1
Y
1
D
HIS
2
D
HIS
2
1
Y
1
D
HIS
3
D
HIS
3
1
Y
1
D
HIS
4
D
HIS
4
1
Y
1
D
HIS
5
D
HIS
5
1
Y
1
D
HIS
6
D
HIS
6
1
Y
1
D
HIS
7
D
HIS
7
1
Y
1
D
HIS
8
D
HIS
8
1
Y
1
5.65
0.90
118.30
123.95
C
C
C
CB
CG
OD1
ASP
ASP
ASP
56
56
56
N
1
A
MET
251
-142.66
58.74
1
A
ASP
255
-29.29
-54.26
1
A
ALA
296
-56.82
-70.75
1
B
LEU
336
-91.10
30.48
1
C
HIS
92
-90.21
50.83
1
C
LEU
93
-21.97
-51.06
1
C
ASN
125
-65.43
86.90
1
C
ASP
127
-102.40
-60.16
1
D
HIS
10
-68.63
57.81
1
D
GLN
26
-69.44
97.71
1
D
ALA
38
-26.97
126.46
1
D
LYS
46
-57.23
1.88
1
D
HIS
69
-98.28
32.85
1
D
ASP
77
-61.04
-174.96
1
D
ASP
110
-67.12
-159.64
1
D
LYS
134
-59.95
0.19
52.694
-1.66
0.00
0.00
-1.66
0.00
3.33
0.930
0.889
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. SOME RESIDUES COMING FROM THE TAG WERE VISIBLE IN THE DENSITY. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY
0.26821
0.20754
0.21051
2.90
47.67
883
17155
4.9
86.48
31.453
0.283
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.700
0.377
0.80
0.80
1.20
PDB ENTRY 2JAB
MAXIMUM LIKELIHOOD
MASK
2.90
47.67
51
3542
0
0
3491
0.015
0.021
3532
1.586
1.967
4752
6.139
5.000
438
44.431
26.440
191
23.565
15.000
677
19.766
15.000
15
0.103
0.200
533
0.005
0.020
2673
0.562
1.500
2194
1.111
2.000
3485
1.742
3.000
1338
3.062
4.500
1267
1
A
1
156
X-RAY DIFFRACTION
medium positional
0.41
0.50
1
C
2
500
X-RAY DIFFRACTION
medium positional
0.32
0.50
1
A
3
188
X-RAY DIFFRACTION
medium positional
0.52
0.50
2
B
1
165
X-RAY DIFFRACTION
loose positional
1.06
5.00
2
D
2
449
X-RAY DIFFRACTION
loose positional
0.74
5.00
2
B
3
215
X-RAY DIFFRACTION
loose positional
0.92
5.00
1
A
1
156
X-RAY DIFFRACTION
medium thermal
0.39
2.00
1
C
2
500
X-RAY DIFFRACTION
medium thermal
2.11
2.00
1
A
3
188
X-RAY DIFFRACTION
medium thermal
1.23
2.00
2
B
1
165
X-RAY DIFFRACTION
loose thermal
0.63
10.00
2
D
2
449
X-RAY DIFFRACTION
loose thermal
2.59
10.00
2
B
3
215
X-RAY DIFFRACTION
loose thermal
2.60
10.00
0.420
0.298
2.975
31
680
20
2.90
50.00
2V4H
86037
0.0
0.13
1
11.60
4.9
84.8
0.45
2.90
3.06
1.80
1
2.2
42.9
refinement
REFMAC
5.4.0069
data reduction
XDS
data scaling
SCALA
phasing
AMoRE
NEMO CC2-LZ domain - 1D5 DARPin complex
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
MET
251
A
MET
24
HELX_P
A
GLU
289
A
GLU
62
1
1
39
A
GLU
289
A
GLU
62
HELX_P
A
ASN
334
A
ASN
107
1
2
46
B
MET
248
B
MET
21
HELX_P
B
GLU
289
B
GLU
62
1
3
42
B
GLU
289
B
GLU
62
HELX_P
B
LEU
336
B
LEU
109
1
4
48
C
ASP
13
C
ASP
13
HELX_P
C
GLY
25
C
GLY
25
1
5
13
C
GLN
26
C
GLN
26
HELX_P
C
ASN
36
C
ASN
36
1
6
11
C
THR
49
C
THR
49
HELX_P
C
TYR
57
C
TYR
57
1
7
9
C
HIS
59
C
HIS
59
HELX_P
C
LYS
68
C
LYS
68
1
8
10
C
THR
82
C
THR
82
HELX_P
C
PHE
90
C
PHE
90
1
9
9
C
HIS
92
C
HIS
92
HELX_P
C
HIS
102
C
HIS
102
1
10
11
C
THR
115
C
THR
115
HELX_P
C
GLY
124
C
GLY
124
1
11
10
C
ASN
125
C
ASN
125
HELX_P
C
ILE
131
C
ILE
131
1
12
7
D
ASP
13
D
ASP
13
HELX_P
D
GLY
25
D
GLY
25
1
13
13
D
GLN
26
D
GLN
26
HELX_P
D
ASN
36
D
ASN
36
1
14
11
D
THR
49
D
THR
49
HELX_P
D
TYR
57
D
TYR
57
1
15
9
D
HIS
59
D
HIS
59
HELX_P
D
HIS
69
D
HIS
69
1
16
11
D
THR
82
D
THR
82
HELX_P
D
GLY
91
D
GLY
91
1
17
10
D
HIS
92
D
HIS
92
HELX_P
D
HIS
102
D
HIS
102
1
18
11
D
THR
115
D
THR
115
HELX_P
D
GLY
124
D
GLY
124
1
19
10
D
ASN
125
D
ASN
125
HELX_P
D
LYS
134
D
LYS
134
1
20
10
TRANSCRIPTION
TRANSCRIPTION, METAL-BINDING, NEMO - IKK GAMMA - NFKB PATHWAY -DARPIN, TRANSCRIPTION REGULATION
A
B
C
D
A
B
A
MET
251
A
MET
24
A
THR
290
A
THR
63
5
B
MET
251
B
MET
24
B
THR
290
B
THR
63
5
C
SER
12
C
SER
12
C
ASN
136
C
ASN
136
5
D
HIS
9
D
HIS
9
D
ASN
136
D
ASN
136
5
A
VAL
291
A
VAL
64
A
LYS
337
A
LYS
110
5
B
VAL
291
B
VAL
64
B
LYS
337
B
LYS
110
5
given
-0.712260
-0.403160
0.574580
-0.132830
-0.726380
-0.674330
0.689230
-0.556620
0.463820
-19.12920
215.30067
100.09966
given
-0.610810
-0.097230
0.785790
-0.446560
-0.777220
-0.443290
0.653830
-0.621670
0.431320
-76.43774
188.67770
110.26794
given
-0.622250
-0.323100
0.713030
-0.231360
-0.794250
-0.561810
0.747850
-0.514560
0.419470
-50.05271
202.21927
102.71049
NEMO_MOUSE
UNP
1
O88522
2V4H
PDB
2
2V4H
251
337
2V4H
251
337
O88522
A
1
24
110
251
337
2V4H
251
337
O88522
B
1
24
110
1
136
2V4H
1
136
2V4H
C
2
1
136
1
136
2V4H
1
136
2V4H
D
2
1
136
1
expression tag
MET
228
2V4H
A
O88522
UNP
1
1
expression tag
GLY
229
2V4H
A
O88522
UNP
2
1
expression tag
SER
230
2V4H
A
O88522
UNP
3
1
expression tag
SER
231
2V4H
A
O88522
UNP
4
1
expression tag
HIS
232
2V4H
A
O88522
UNP
5
1
expression tag
HIS
233
2V4H
A
O88522
UNP
6
1
expression tag
HIS
234
2V4H
A
O88522
UNP
7
1
expression tag
HIS
235
2V4H
A
O88522
UNP
8
1
expression tag
HIS
236
2V4H
A
O88522
UNP
9
1
expression tag
HIS
237
2V4H
A
O88522
UNP
10
1
expression tag
SER
238
2V4H
A
O88522
UNP
11
1
expression tag
SER
239
2V4H
A
O88522
UNP
12
1
expression tag
GLY
240
2V4H
A
O88522
UNP
13
1
expression tag
LEU
241
2V4H
A
O88522
UNP
14
1
expression tag
VAL
242
2V4H
A
O88522
UNP
15
1
expression tag
PRO
243
2V4H
A
O88522
UNP
16
1
expression tag
ARG
244
2V4H
A
O88522
UNP
17
1
expression tag
GLY
245
2V4H
A
O88522
UNP
18
1
expression tag
SER
246
2V4H
A
O88522
UNP
19
1
expression tag
HIS
247
2V4H
A
O88522
UNP
20
1
expression tag
MET
248
2V4H
A
O88522
UNP
21
1
expression tag
ALA
249
2V4H
A
O88522
UNP
22
1
expression tag
SER
250
2V4H
A
O88522
UNP
23
2
expression tag
MET
228
2V4H
B
O88522
UNP
1
2
expression tag
GLY
229
2V4H
B
O88522
UNP
2
2
expression tag
SER
230
2V4H
B
O88522
UNP
3
2
expression tag
SER
231
2V4H
B
O88522
UNP
4
2
expression tag
HIS
232
2V4H
B
O88522
UNP
5
2
expression tag
HIS
233
2V4H
B
O88522
UNP
6
2
expression tag
HIS
234
2V4H
B
O88522
UNP
7
2
expression tag
HIS
235
2V4H
B
O88522
UNP
8
2
expression tag
HIS
236
2V4H
B
O88522
UNP
9
2
expression tag
HIS
237
2V4H
B
O88522
UNP
10
2
expression tag
SER
238
2V4H
B
O88522
UNP
11
2
expression tag
SER
239
2V4H
B
O88522
UNP
12
2
expression tag
GLY
240
2V4H
B
O88522
UNP
13
2
expression tag
LEU
241
2V4H
B
O88522
UNP
14
2
expression tag
VAL
242
2V4H
B
O88522
UNP
15
2
expression tag
PRO
243
2V4H
B
O88522
UNP
16
2
expression tag
ARG
244
2V4H
B
O88522
UNP
17
2
expression tag
GLY
245
2V4H
B
O88522
UNP
18
2
expression tag
SER
246
2V4H
B
O88522
UNP
19
2
expression tag
HIS
247
2V4H
B
O88522
UNP
20
2
expression tag
MET
248
2V4H
B
O88522
UNP
21
2
expression tag
ALA
249
2V4H
B
O88522
UNP
22
2
expression tag
SER
250
2V4H
B
O88522
UNP
23
96
P 43 21 2