0.015897
0.000000
0.000000
0.000000
0.015022
0.000000
0.000000
0.000000
0.011429
0.00000
0.00000
0.00000
Ramon-Maiques, S.
Yang, W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
62.905
66.569
87.495
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C8 H18 N4 O2
202.254
n
NG,NG-DIMETHYL-L-ARGININE
ADMA
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H21 N2 O2 1
189.275
n
N-TRIMETHYLLYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
C
N
90
N
N
N
91
S
C
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
N
N
96
N
C
N
97
N
N
N
98
N
N
N
99
N
C
N
100
N
O
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
S
C
N
122
N
C
N
123
N
O
N
124
N
C
N
125
N
C
N
126
N
C
N
127
N
O
N
128
N
N
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
Y
174
N
C
Y
175
N
N
Y
176
N
C
Y
177
N
C
Y
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
S
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
N
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
N
N
263
S
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
N
N
269
N
C
N
270
N
O
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
S
N
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
C
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
N
N
357
S
C
N
358
N
C
N
359
N
O
N
360
N
C
N
361
N
O
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
R
C
N
375
N
O
N
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
N
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
N
425
N
O
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
N
N
439
S
C
N
440
N
C
N
441
N
O
N
442
N
C
N
443
N
C
N
444
N
C
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
Y
171
N
sing
Y
172
N
doub
Y
173
N
doub
N
174
N
sing
Y
175
N
sing
N
176
N
sing
Y
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
Y
312
N
doub
Y
313
N
sing
Y
314
N
sing
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
sing
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
104
18993
10.1073/PNAS.0709170104
18025461
The Plant Homeodomain Finger of Rag2 Recognizes Histone H3 Methylated at Both Lysine-4 and Arginine-2.
2007
UK
Nature
NATUAS
0006
0028-0836
450
1106
10.1038/NATURE06431
18033247
Rag2 Phd Finger Couples Histone H3 Lysine 4 Trimethylation with V(D)J Recombination.
2007
10.2210/pdb2v86/pdb
pdb_00002v86
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
IMAGE PLATE
2006-03-04
RIGAKU-MSC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
9360.498
VDJ RECOMBINATION-ACTIVATING PROTEIN 2
RESIDUES 414-487
2
man
polymer
R2 ASYMMETRICALLY DIMETHYLATED AND K4 TRIMETHYLATED
1074.277
H3R2ME2AK4ME3 PEPTIDE
H3 (1-21), BIOTINILATED AT C-TERMINUS
2
syn
polymer
65.409
ZINC ION
4
syn
non-polymer
18.015
water
329
nat
water
RAG2, RAG2-PHD FINGER
no
no
GPLGSPEFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNEHVQIA
RA
GPLGSPEFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNEHVQIA
RA
A,B
polypeptide(L)
no
yes
A(DA2)T(M3L)QTARA
ARTKQTARA
D,E
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HOUSE MOUSE
sample
10090
MUS MUSCULUS
469008
ESCHERICHIA COLI
BL21(DE3)
PLASMID
PGEX-6P-1
1
2.23
44.48
NONE
VAPOR DIFFUSION, HANGING DROP
VAPOR DIFFUSION. HANGING DROP. 28% PEG 20,000, 0.1M MES PH 6.5, 3% ISOPROPANOL TEMPERATURE 293K
293
entity_poly
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
pdbx_seq_map_depositor_info
struct_conn
database_PDB_rev
database_PDB_rev_record
exptl_crystal_grow
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_conn_type
struct_site
repository
Initial release
Database references
Derived calculations
Other
Refinement description
Source and taxonomy
Version format compliance
Atomic model
Non-polymer description
Other
Database references
Non-polymer description
Other
Source and taxonomy
Data collection
Derived calculations
Experimental preparation
Other
Polymer sequence
Data collection
Experimental preparation
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2007-12-11
1
1
2013-09-04
1
2
2013-11-06
1
3
2017-02-08
2
0
2019-03-06
2
1
2019-05-08
2
2
2023-12-13
_entity_poly.pdbx_seq_one_letter_code_can
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
_pdbx_seq_map_depositor_info.one_letter_code
_struct_conn.pdbx_leaving_atom_flag
_exptl_crystal_grow.method
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
A PHD FINGER MOTIF IN THE C-TERMINUS OF RAG2 MODULATESRECOMBINATION ACTIVITY
CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE
CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3R2ME1K4ME3 PEPTIDE
CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3R2ME2SK4ME3 PEPTIDE
CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3R2ME2SK4ME2 PEPTIDE
CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTION
PDBE
Y
PDBE
2007-08-02
REL
REL
1
A
O
HOH
2125
5.93
1
B
O
HOH
2150
5.86
1
B
O
HOH
2158
7.87
1
E
O
HOH
2003
6.26
ZN
ZINC ION
HOH
water
10090
HOUSE MOUSE
MUS MUSCULUS
sample
N-TERMINAL SEGMENT GPLGSPEFG IS CARRIED OVER FROM THE
EXPRESSION VECTOR AFTER PROTEASE CLEAVAGE
2V83
PDB ENTRY 2V83
PDB
experimental model
ZN
1488
3
ZN
ZN
1488
A
ZN
1489
3
ZN
ZN
1489
A
ZN
1488
3
ZN
ZN
1488
B
ZN
1489
3
ZN
ZN
1489
B
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
HOH
2109
4
HOH
HOH
2109
A
HOH
2110
4
HOH
HOH
2110
A
HOH
2111
4
HOH
HOH
2111
A
HOH
2112
4
HOH
HOH
2112
A
HOH
2113
4
HOH
HOH
2113
A
HOH
2114
4
HOH
HOH
2114
A
HOH
2115
4
HOH
HOH
2115
A
HOH
2116
4
HOH
HOH
2116
A
HOH
2117
4
HOH
HOH
2117
A
HOH
2118
4
HOH
HOH
2118
A
HOH
2119
4
HOH
HOH
2119
A
HOH
2120
4
HOH
HOH
2120
A
HOH
2121
4
HOH
HOH
2121
A
HOH
2122
4
HOH
HOH
2122
A
HOH
2123
4
HOH
HOH
2123
A
HOH
2124
4
HOH
HOH
2124
A
HOH
2125
4
HOH
HOH
2125
A
HOH
2126
4
HOH
HOH
2126
A
HOH
2127
4
HOH
HOH
2127
A
HOH
2128
4
HOH
HOH
2128
A
HOH
2129
4
HOH
HOH
2129
A
HOH
2130
4
HOH
HOH
2130
A
HOH
2131
4
HOH
HOH
2131
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2034
4
HOH
HOH
2034
B
HOH
2035
4
HOH
HOH
2035
B
HOH
2036
4
HOH
HOH
2036
B
HOH
2037
4
HOH
HOH
2037
B
HOH
2038
4
HOH
HOH
2038
B
HOH
2039
4
HOH
HOH
2039
B
HOH
2040
4
HOH
HOH
2040
B
HOH
2041
4
HOH
HOH
2041
B
HOH
2042
4
HOH
HOH
2042
B
HOH
2043
4
HOH
HOH
2043
B
HOH
2044
4
HOH
HOH
2044
B
HOH
2045
4
HOH
HOH
2045
B
HOH
2046
4
HOH
HOH
2046
B
HOH
2047
4
HOH
HOH
2047
B
HOH
2048
4
HOH
HOH
2048
B
HOH
2049
4
HOH
HOH
2049
B
HOH
2050
4
HOH
HOH
2050
B
HOH
2051
4
HOH
HOH
2051
B
HOH
2052
4
HOH
HOH
2052
B
HOH
2053
4
HOH
HOH
2053
B
HOH
2054
4
HOH
HOH
2054
B
HOH
2055
4
HOH
HOH
2055
B
HOH
2056
4
HOH
HOH
2056
B
HOH
2057
4
HOH
HOH
2057
B
HOH
2058
4
HOH
HOH
2058
B
HOH
2059
4
HOH
HOH
2059
B
HOH
2060
4
HOH
HOH
2060
B
HOH
2062
4
HOH
HOH
2062
B
HOH
2063
4
HOH
HOH
2063
B
HOH
2064
4
HOH
HOH
2064
B
HOH
2065
4
HOH
HOH
2065
B
HOH
2066
4
HOH
HOH
2066
B
HOH
2067
4
HOH
HOH
2067
B
HOH
2068
4
HOH
HOH
2068
B
HOH
2069
4
HOH
HOH
2069
B
HOH
2070
4
HOH
HOH
2070
B
HOH
2071
4
HOH
HOH
2071
B
HOH
2072
4
HOH
HOH
2072
B
HOH
2073
4
HOH
HOH
2073
B
HOH
2074
4
HOH
HOH
2074
B
HOH
2075
4
HOH
HOH
2075
B
HOH
2076
4
HOH
HOH
2076
B
HOH
2077
4
HOH
HOH
2077
B
HOH
2078
4
HOH
HOH
2078
B
HOH
2079
4
HOH
HOH
2079
B
HOH
2080
4
HOH
HOH
2080
B
HOH
2081
4
HOH
HOH
2081
B
HOH
2082
4
HOH
HOH
2082
B
HOH
2083
4
HOH
HOH
2083
B
HOH
2084
4
HOH
HOH
2084
B
HOH
2085
4
HOH
HOH
2085
B
HOH
2086
4
HOH
HOH
2086
B
HOH
2087
4
HOH
HOH
2087
B
HOH
2088
4
HOH
HOH
2088
B
HOH
2089
4
HOH
HOH
2089
B
HOH
2090
4
HOH
HOH
2090
B
HOH
2091
4
HOH
HOH
2091
B
HOH
2092
4
HOH
HOH
2092
B
HOH
2093
4
HOH
HOH
2093
B
HOH
2094
4
HOH
HOH
2094
B
HOH
2095
4
HOH
HOH
2095
B
HOH
2096
4
HOH
HOH
2096
B
HOH
2097
4
HOH
HOH
2097
B
HOH
2098
4
HOH
HOH
2098
B
HOH
2099
4
HOH
HOH
2099
B
HOH
2100
4
HOH
HOH
2100
B
HOH
2101
4
HOH
HOH
2101
B
HOH
2102
4
HOH
HOH
2102
B
HOH
2103
4
HOH
HOH
2103
B
HOH
2104
4
HOH
HOH
2104
B
HOH
2105
4
HOH
HOH
2105
B
HOH
2106
4
HOH
HOH
2106
B
HOH
2107
4
HOH
HOH
2107
B
HOH
2108
4
HOH
HOH
2108
B
HOH
2109
4
HOH
HOH
2109
B
HOH
2110
4
HOH
HOH
2110
B
HOH
2111
4
HOH
HOH
2111
B
HOH
2112
4
HOH
HOH
2112
B
HOH
2113
4
HOH
HOH
2113
B
HOH
2114
4
HOH
HOH
2114
B
HOH
2115
4
HOH
HOH
2115
B
HOH
2116
4
HOH
HOH
2116
B
HOH
2117
4
HOH
HOH
2117
B
HOH
2118
4
HOH
HOH
2118
B
HOH
2119
4
HOH
HOH
2119
B
HOH
2120
4
HOH
HOH
2120
B
HOH
2121
4
HOH
HOH
2121
B
HOH
2122
4
HOH
HOH
2122
B
HOH
2123
4
HOH
HOH
2123
B
HOH
2125
4
HOH
HOH
2125
B
HOH
2126
4
HOH
HOH
2126
B
HOH
2127
4
HOH
HOH
2127
B
HOH
2128
4
HOH
HOH
2128
B
HOH
2129
4
HOH
HOH
2129
B
HOH
2130
4
HOH
HOH
2130
B
HOH
2131
4
HOH
HOH
2131
B
HOH
2132
4
HOH
HOH
2132
B
HOH
2133
4
HOH
HOH
2133
B
HOH
2134
4
HOH
HOH
2134
B
HOH
2135
4
HOH
HOH
2135
B
HOH
2136
4
HOH
HOH
2136
B
HOH
2137
4
HOH
HOH
2137
B
HOH
2138
4
HOH
HOH
2138
B
HOH
2139
4
HOH
HOH
2139
B
HOH
2140
4
HOH
HOH
2140
B
HOH
2141
4
HOH
HOH
2141
B
HOH
2142
4
HOH
HOH
2142
B
HOH
2143
4
HOH
HOH
2143
B
HOH
2144
4
HOH
HOH
2144
B
HOH
2145
4
HOH
HOH
2145
B
HOH
2146
4
HOH
HOH
2146
B
HOH
2147
4
HOH
HOH
2147
B
HOH
2148
4
HOH
HOH
2148
B
HOH
2149
4
HOH
HOH
2149
B
HOH
2150
4
HOH
HOH
2150
B
HOH
2151
4
HOH
HOH
2151
B
HOH
2152
4
HOH
HOH
2152
B
HOH
2153
4
HOH
HOH
2153
B
HOH
2154
4
HOH
HOH
2154
B
HOH
2155
4
HOH
HOH
2155
B
HOH
2156
4
HOH
HOH
2156
B
HOH
2157
4
HOH
HOH
2157
B
HOH
2158
4
HOH
HOH
2158
B
HOH
2159
4
HOH
HOH
2159
B
HOH
2001
4
HOH
HOH
2001
D
HOH
2002
4
HOH
HOH
2002
D
HOH
2003
4
HOH
HOH
2003
D
HOH
2004
4
HOH
HOH
2004
D
HOH
2005
4
HOH
HOH
2005
D
HOH
2006
4
HOH
HOH
2006
D
HOH
2007
4
HOH
HOH
2007
D
HOH
2008
4
HOH
HOH
2008
D
HOH
2009
4
HOH
HOH
2009
D
HOH
2010
4
HOH
HOH
2010
D
HOH
2011
4
HOH
HOH
2011
D
HOH
2012
4
HOH
HOH
2012
D
HOH
2013
4
HOH
HOH
2013
D
HOH
2014
4
HOH
HOH
2014
D
HOH
2015
4
HOH
HOH
2015
D
HOH
2016
4
HOH
HOH
2016
D
HOH
2017
4
HOH
HOH
2017
D
HOH
2018
4
HOH
HOH
2018
D
HOH
2019
4
HOH
HOH
2019
D
HOH
2020
4
HOH
HOH
2020
D
HOH
2021
4
HOH
HOH
2021
D
HOH
2022
4
HOH
HOH
2022
D
HOH
2023
4
HOH
HOH
2023
D
HOH
2024
4
HOH
HOH
2024
D
HOH
2025
4
HOH
HOH
2025
D
HOH
2026
4
HOH
HOH
2026
D
HOH
2001
4
HOH
HOH
2001
E
HOH
2002
4
HOH
HOH
2002
E
HOH
2003
4
HOH
HOH
2003
E
HOH
2004
4
HOH
HOH
2004
E
HOH
2005
4
HOH
HOH
2005
E
HOH
2006
4
HOH
HOH
2006
E
HOH
2007
4
HOH
HOH
2007
E
HOH
2008
4
HOH
HOH
2008
E
HOH
2009
4
HOH
HOH
2009
E
HOH
2010
4
HOH
HOH
2010
E
HOH
2011
4
HOH
HOH
2011
E
HOH
2012
4
HOH
HOH
2012
E
HOH
2013
4
HOH
HOH
2013
E
HOH
2014
4
HOH
HOH
2014
E
HOH
2015
4
HOH
HOH
2015
E
GLY
406
n
1
GLY
406
A
PRO
407
n
2
PRO
407
A
LEU
408
n
3
LEU
408
A
GLY
409
n
4
GLY
409
A
SER
410
n
5
SER
410
A
PRO
411
n
6
PRO
411
A
GLU
412
n
7
GLU
412
A
PHE
413
n
8
PHE
413
A
GLY
414
n
9
GLY
414
A
TYR
415
n
10
TYR
415
A
TRP
416
n
11
TRP
416
A
ILE
417
n
12
ILE
417
A
THR
418
n
13
THR
418
A
CYS
419
n
14
CYS
419
A
CYS
420
n
15
CYS
420
A
PRO
421
n
16
PRO
421
A
THR
422
n
17
THR
422
A
CYS
423
n
18
CYS
423
A
ASP
424
n
19
ASP
424
A
VAL
425
n
20
VAL
425
A
ASP
426
n
21
ASP
426
A
ILE
427
n
22
ILE
427
A
ASN
428
n
23
ASN
428
A
THR
429
n
24
THR
429
A
TRP
430
n
25
TRP
430
A
VAL
431
n
26
VAL
431
A
PRO
432
n
27
PRO
432
A
PHE
433
n
28
PHE
433
A
TYR
434
n
29
TYR
434
A
SER
435
n
30
SER
435
A
THR
436
n
31
THR
436
A
GLU
437
n
32
GLU
437
A
LEU
438
n
33
LEU
438
A
ASN
439
n
34
ASN
439
A
LYS
440
n
35
LYS
440
A
PRO
441
n
36
PRO
441
A
ALA
442
n
37
ALA
442
A
MET
443
n
38
MET
443
A
ILE
444
n
39
ILE
444
A
TYR
445
n
40
TYR
445
A
CYS
446
n
41
CYS
446
A
SER
447
n
42
SER
447
A
HIS
448
n
43
HIS
448
A
GLY
449
n
44
GLY
449
A
ASP
450
n
45
ASP
450
A
GLY
451
n
46
GLY
451
A
HIS
452
n
47
HIS
452
A
TRP
453
n
48
TRP
453
A
VAL
454
n
49
VAL
454
A
HIS
455
n
50
HIS
455
A
ALA
456
n
51
ALA
456
A
GLN
457
n
52
GLN
457
A
CYS
458
n
53
CYS
458
A
MET
459
n
54
MET
459
A
ASP
460
n
55
ASP
460
A
LEU
461
n
56
LEU
461
A
GLU
462
n
57
GLU
462
A
GLU
463
n
58
GLU
463
A
ARG
464
n
59
ARG
464
A
THR
465
n
60
THR
465
A
LEU
466
n
61
LEU
466
A
ILE
467
n
62
ILE
467
A
HIS
468
n
63
HIS
468
A
LEU
469
n
64
LEU
469
A
SER
470
n
65
SER
470
A
GLU
471
n
66
GLU
471
A
GLY
472
n
67
GLY
472
A
SER
473
n
68
SER
473
A
ASN
474
n
69
ASN
474
A
LYS
475
n
70
LYS
475
A
TYR
476
n
71
TYR
476
A
TYR
477
n
72
TYR
477
A
CYS
478
n
73
CYS
478
A
ASN
479
n
74
ASN
479
A
GLU
480
n
75
GLU
480
A
HIS
481
n
76
HIS
481
A
VAL
482
n
77
VAL
482
A
GLN
483
n
78
GLN
483
A
ILE
484
n
79
ILE
484
A
ALA
485
n
80
ALA
485
A
ARG
486
n
81
ARG
486
A
ALA
487
n
82
ALA
487
A
GLY
406
n
1
GLY
406
B
PRO
407
n
2
PRO
407
B
LEU
408
n
3
LEU
408
B
GLY
409
n
4
GLY
409
B
SER
410
n
5
SER
410
B
PRO
411
n
6
PRO
411
B
GLU
412
n
7
GLU
412
B
PHE
413
n
8
PHE
413
B
GLY
414
n
9
GLY
414
B
TYR
415
n
10
TYR
415
B
TRP
416
n
11
TRP
416
B
ILE
417
n
12
ILE
417
B
THR
418
n
13
THR
418
B
CYS
419
n
14
CYS
419
B
CYS
420
n
15
CYS
420
B
PRO
421
n
16
PRO
421
B
THR
422
n
17
THR
422
B
CYS
423
n
18
CYS
423
B
ASP
424
n
19
ASP
424
B
VAL
425
n
20
VAL
425
B
ASP
426
n
21
ASP
426
B
ILE
427
n
22
ILE
427
B
ASN
428
n
23
ASN
428
B
THR
429
n
24
THR
429
B
TRP
430
n
25
TRP
430
B
VAL
431
n
26
VAL
431
B
PRO
432
n
27
PRO
432
B
PHE
433
n
28
PHE
433
B
TYR
434
n
29
TYR
434
B
SER
435
n
30
SER
435
B
THR
436
n
31
THR
436
B
GLU
437
n
32
GLU
437
B
LEU
438
n
33
LEU
438
B
ASN
439
n
34
ASN
439
B
LYS
440
n
35
LYS
440
B
PRO
441
n
36
PRO
441
B
ALA
442
n
37
ALA
442
B
MET
443
n
38
MET
443
B
ILE
444
n
39
ILE
444
B
TYR
445
n
40
TYR
445
B
CYS
446
n
41
CYS
446
B
SER
447
n
42
SER
447
B
HIS
448
n
43
HIS
448
B
GLY
449
n
44
GLY
449
B
ASP
450
n
45
ASP
450
B
GLY
451
n
46
GLY
451
B
HIS
452
n
47
HIS
452
B
TRP
453
n
48
TRP
453
B
VAL
454
n
49
VAL
454
B
HIS
455
n
50
HIS
455
B
ALA
456
n
51
ALA
456
B
GLN
457
n
52
GLN
457
B
CYS
458
n
53
CYS
458
B
MET
459
n
54
MET
459
B
ASP
460
n
55
ASP
460
B
LEU
461
n
56
LEU
461
B
GLU
462
n
57
GLU
462
B
GLU
463
n
58
GLU
463
B
ARG
464
n
59
ARG
464
B
THR
465
n
60
THR
465
B
LEU
466
n
61
LEU
466
B
ILE
467
n
62
ILE
467
B
HIS
468
n
63
HIS
468
B
LEU
469
n
64
LEU
469
B
SER
470
n
65
SER
470
B
GLU
471
n
66
GLU
471
B
GLY
472
n
67
GLY
472
B
SER
473
n
68
SER
473
B
ASN
474
n
69
ASN
474
B
LYS
475
n
70
LYS
475
B
TYR
476
n
71
TYR
476
B
TYR
477
n
72
TYR
477
B
CYS
478
n
73
CYS
478
B
ASN
479
n
74
ASN
479
B
GLU
480
n
75
GLU
480
B
HIS
481
n
76
HIS
481
B
VAL
482
n
77
VAL
482
B
GLN
483
n
78
GLN
483
B
ILE
484
n
79
ILE
484
B
ALA
485
n
80
ALA
485
B
ARG
486
n
81
ARG
486
B
ALA
487
n
82
ALA
487
B
ALA
1
n
1
ALA
1
D
DA2
2
n
2
DA2
2
D
THR
3
n
3
THR
3
D
M3L
4
n
4
M3L
4
D
GLN
5
n
5
GLN
5
D
THR
6
n
6
THR
6
D
ALA
7
n
7
ALA
7
D
ARG
8
n
8
ARG
8
D
ALA
9
n
9
ALA
9
D
ALA
1
n
1
ALA
1
E
DA2
2
n
2
DA2
2
E
THR
3
n
3
THR
3
E
M3L
4
n
4
M3L
4
E
GLN
5
n
5
GLN
5
E
THR
6
n
6
THR
6
E
ALA
7
n
7
ALA
7
E
ARG
8
n
8
ARG
8
E
ALA
9
n
9
ALA
9
E
author_and_software_defined_assembly
PQS
2
dimeric
author_and_software_defined_assembly
PQS
2
dimeric
1610
-12.2
7110
1500
-12.2
6990
A
CYS
419
A
SG
CYS
14
1_555
A
ZN
1488
E
ZN
ZN
1_555
A
CYS
423
A
SG
CYS
18
1_555
114.4
A
CYS
419
A
SG
CYS
14
1_555
A
ZN
1488
E
ZN
ZN
1_555
A
HIS
455
A
ND1
HIS
50
1_555
105.0
A
CYS
423
A
SG
CYS
18
1_555
A
ZN
1488
E
ZN
ZN
1_555
A
HIS
455
A
ND1
HIS
50
1_555
101.2
A
CYS
419
A
SG
CYS
14
1_555
A
ZN
1488
E
ZN
ZN
1_555
A
CYS
458
A
SG
CYS
53
1_555
111.8
A
CYS
423
A
SG
CYS
18
1_555
A
ZN
1488
E
ZN
ZN
1_555
A
CYS
458
A
SG
CYS
53
1_555
109.2
A
HIS
455
A
ND1
HIS
50
1_555
A
ZN
1488
E
ZN
ZN
1_555
A
CYS
458
A
SG
CYS
53
1_555
114.9
A
CYS
446
A
SG
CYS
41
1_555
A
ZN
1489
F
ZN
ZN
1_555
A
HIS
452
A
NE2
HIS
47
1_555
108.3
A
CYS
446
A
SG
CYS
41
1_555
A
ZN
1489
F
ZN
ZN
1_555
A
CYS
478
A
SG
CYS
73
1_555
118.7
A
HIS
452
A
NE2
HIS
47
1_555
A
ZN
1489
F
ZN
ZN
1_555
A
CYS
478
A
SG
CYS
73
1_555
109.6
A
CYS
446
A
SG
CYS
41
1_555
A
ZN
1489
F
ZN
ZN
1_555
A
HIS
481
A
ND1
HIS
76
1_555
119.2
A
HIS
452
A
NE2
HIS
47
1_555
A
ZN
1489
F
ZN
ZN
1_555
A
HIS
481
A
ND1
HIS
76
1_555
101.0
A
CYS
478
A
SG
CYS
73
1_555
A
ZN
1489
F
ZN
ZN
1_555
A
HIS
481
A
ND1
HIS
76
1_555
98.5
B
CYS
419
B
SG
CYS
14
1_555
B
ZN
1488
G
ZN
ZN
1_555
B
CYS
423
B
SG
CYS
18
1_555
116.4
B
CYS
419
B
SG
CYS
14
1_555
B
ZN
1488
G
ZN
ZN
1_555
B
HIS
455
B
ND1
HIS
50
1_555
107.9
B
CYS
423
B
SG
CYS
18
1_555
B
ZN
1488
G
ZN
ZN
1_555
B
HIS
455
B
ND1
HIS
50
1_555
103.5
B
CYS
419
B
SG
CYS
14
1_555
B
ZN
1488
G
ZN
ZN
1_555
B
CYS
458
B
SG
CYS
53
1_555
110.0
B
CYS
423
B
SG
CYS
18
1_555
B
ZN
1488
G
ZN
ZN
1_555
B
CYS
458
B
SG
CYS
53
1_555
106.6
B
HIS
455
B
ND1
HIS
50
1_555
B
ZN
1488
G
ZN
ZN
1_555
B
CYS
458
B
SG
CYS
53
1_555
112.5
B
CYS
446
B
SG
CYS
41
1_555
B
ZN
1489
H
ZN
ZN
1_555
B
HIS
452
B
NE2
HIS
47
1_555
102.0
B
CYS
446
B
SG
CYS
41
1_555
B
ZN
1489
H
ZN
ZN
1_555
B
CYS
478
B
SG
CYS
73
1_555
115.7
B
HIS
452
B
NE2
HIS
47
1_555
B
ZN
1489
H
ZN
ZN
1_555
B
CYS
478
B
SG
CYS
73
1_555
114.8
B
CYS
446
B
SG
CYS
41
1_555
B
ZN
1489
H
ZN
ZN
1_555
B
HIS
481
B
ND1
HIS
76
1_555
117.8
B
HIS
452
B
NE2
HIS
47
1_555
B
ZN
1489
H
ZN
ZN
1_555
B
HIS
481
B
ND1
HIS
76
1_555
105.1
B
CYS
478
B
SG
CYS
73
1_555
B
ZN
1489
H
ZN
ZN
1_555
B
HIS
481
B
ND1
HIS
76
1_555
101.5
D
DA2
2
NG,NG-DIMETHYL-L-ARGININE
C
DA2
2
ARG
D
M3L
4
N-TRIMETHYLLYSINE
C
M3L
4
LYS
E
DA2
2
NG,NG-DIMETHYL-L-ARGININE
D
DA2
2
ARG
E
M3L
4
N-TRIMETHYLLYSINE
D
M3L
4
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
CYS
446
A
N
CYS
41
A
O
HIS
452
A
O
HIS
47
B
N
CYS
446
B
N
CYS
41
B
O
HIS
452
B
O
HIS
47
1
A
CG
LEU
408
A
CG
LEU
3
1
Y
1
A
CD1
LEU
408
A
CD1
LEU
3
1
Y
1
A
CD2
LEU
408
A
CD2
LEU
3
1
Y
1
A
OG
SER
410
A
OG
SER
5
1
Y
1
B
CG
LEU
408
B
CG
LEU
3
1
Y
1
B
CD1
LEU
408
B
CD1
LEU
3
1
Y
1
B
CD2
LEU
408
B
CD2
LEU
3
1
Y
1
D
CA
ALA
9
C
CA
ALA
9
1
Y
1
D
C
ALA
9
C
C
ALA
9
1
Y
1
D
O
ALA
9
C
O
ALA
9
1
Y
1
D
CB
ALA
9
C
CB
ALA
9
1
Y
1
B
B
CB
CB
LEU
LEU
408
408
1.82
1_555
4_545
1
A
LEU
408
7.94
-130.17
1
A
PRO
411
-22.59
90.28
1
A
THR
429
-141.19
-12.86
1
A
PHE
433
-128.24
-60.88
1
A
LEU
438
-135.36
-68.52
1
B
TRP
416
-104.01
52.84
1
B
THR
429
-142.46
-16.06
1
B
PHE
433
-127.92
-61.58
1
B
LEU
438
-133.02
-69.78
18.496
-0.134
0.000
0.000
-0.126
0.000
0.260
0.2107
0.00087
0.1728
0.1728
2.05
30
583
11257
4.9
94.9
RANDOM
10000
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 2V83
MAXIMUM LIKELIHOOD
FLAT MODEL
47.2446
0.360332
0.21
2.05
30
329
1781
4
0
1448
0.005583
1.30318
0.2909
0.04
0.2242
2.12
49
973
11
5
99.9
18.5
2.05
30.00
2V86
11827
1.0
0.18
1
9.90
5
99.8
0.52
2.05
2.12
3.00
1
5
99.9
refinement
CNS
1.1
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
Crystal structure of RAG2-PHD finger in complex with H3R2me2aK4me3 peptide
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
GLN
457
A
GLN
52
HELX_P
A
ASP
460
A
ASP
55
5
1
4
A
GLU
462
A
GLU
57
HELX_P
A
GLY
472
A
GLY
67
1
2
11
A
HIS
481
A
HIS
76
HELX_P
A
ALA
487
A
ALA
82
1
3
7
B
GLN
457
B
GLN
52
HELX_P
B
ASP
460
B
ASP
55
5
4
4
B
GLU
462
B
GLU
57
HELX_P
B
GLY
472
B
GLY
67
1
5
11
B
HIS
481
B
HIS
76
HELX_P
B
ALA
487
B
ALA
82
1
6
7
covale
1.328
both
D
ALA
1
C
C
ALA
1
1_555
D
DA2
2
C
N
DA2
2
1_555
covale
1.330
both
D
DA2
2
C
C
DA2
2
1_555
D
THR
3
C
N
THR
3
1_555
covale
1.331
both
D
THR
3
C
C
THR
3
1_555
D
M3L
4
C
N
M3L
4
1_555
covale
1.328
both
D
M3L
4
C
C
M3L
4
1_555
D
GLN
5
C
N
GLN
5
1_555
covale
1.323
both
B
E
ALA
1
D
C
ALA
1
1_555
E
DA2
2
D
N
DA2
2
1_555
covale
1.334
both
A
E
ALA
1
D
C
ALA
1
1_555
E
DA2
2
D
N
DA2
2
1_555
covale
1.329
both
B
E
DA2
2
D
C
DA2
2
1_555
E
THR
3
D
N
THR
3
1_555
covale
1.325
both
A
E
DA2
2
D
C
DA2
2
1_555
E
THR
3
D
N
THR
3
1_555
covale
1.328
both
E
THR
3
D
C
THR
3
1_555
E
M3L
4
D
N
M3L
4
1_555
covale
1.329
both
E
M3L
4
D
C
M3L
4
1_555
E
GLN
5
D
N
GLN
5
1_555
metalc
2.318
A
CYS
419
A
SG
CYS
14
1_555
A
ZN
1488
E
ZN
ZN
1_555
metalc
2.361
A
CYS
423
A
SG
CYS
18
1_555
A
ZN
1488
E
ZN
ZN
1_555
metalc
2.199
A
CYS
446
A
SG
CYS
41
1_555
A
ZN
1489
F
ZN
ZN
1_555
metalc
2.107
A
HIS
452
A
NE2
HIS
47
1_555
A
ZN
1489
F
ZN
ZN
1_555
metalc
2.034
A
HIS
455
A
ND1
HIS
50
1_555
A
ZN
1488
E
ZN
ZN
1_555
metalc
2.312
A
CYS
458
A
SG
CYS
53
1_555
A
ZN
1488
E
ZN
ZN
1_555
metalc
2.332
A
CYS
478
A
SG
CYS
73
1_555
A
ZN
1489
F
ZN
ZN
1_555
metalc
2.140
A
HIS
481
A
ND1
HIS
76
1_555
A
ZN
1489
F
ZN
ZN
1_555
metalc
2.304
B
CYS
419
B
SG
CYS
14
1_555
B
ZN
1488
G
ZN
ZN
1_555
metalc
2.419
B
CYS
423
B
SG
CYS
18
1_555
B
ZN
1488
G
ZN
ZN
1_555
metalc
2.261
B
CYS
446
B
SG
CYS
41
1_555
B
ZN
1489
H
ZN
ZN
1_555
metalc
2.014
B
HIS
452
B
NE2
HIS
47
1_555
B
ZN
1489
H
ZN
ZN
1_555
metalc
2.058
B
HIS
455
B
ND1
HIS
50
1_555
B
ZN
1488
G
ZN
ZN
1_555
metalc
2.273
B
CYS
458
B
SG
CYS
53
1_555
B
ZN
1488
G
ZN
ZN
1_555
metalc
2.309
B
CYS
478
B
SG
CYS
73
1_555
B
ZN
1489
H
ZN
ZN
1_555
metalc
2.111
B
HIS
481
B
ND1
HIS
76
1_555
B
ZN
1489
H
ZN
ZN
1_555
PROTEIN BINDING
V(D)J RECOMBINATION, COVALENT MODIFICATIONS, RAG2, HISTONE, NUCLEUS, NUCLEASE, HYDROLASE, PHD FINGER, DNA-BINDING, RECOMBINASE, ENDONUCLEASE, TRIMETHYL LYSINE, DIMETHYL ARGININE, DNA RECOMBINATION, PROTEIN BINDING
RAG2_MOUSE
UNP
1
P21784
H32_MOUSE
UNP
2
P84228
414
487
2V86
414
487
P21784
A
1
9
82
414
487
2V86
414
487
P21784
B
1
9
82
2
10
2V86
1
9
P84228
D
2
1
9
2
10
2V86
1
9
P84228
E
2
1
9
1
expression tag
GLY
406
2V86
A
P21784
UNP
1
1
expression tag
PRO
407
2V86
A
P21784
UNP
2
1
expression tag
LEU
408
2V86
A
P21784
UNP
3
1
expression tag
GLY
409
2V86
A
P21784
UNP
4
1
expression tag
SER
410
2V86
A
P21784
UNP
5
1
expression tag
PRO
411
2V86
A
P21784
UNP
6
1
expression tag
GLU
412
2V86
A
P21784
UNP
7
1
expression tag
PHE
413
2V86
A
P21784
UNP
8
2
expression tag
GLY
406
2V86
B
P21784
UNP
1
2
expression tag
PRO
407
2V86
B
P21784
UNP
2
2
expression tag
LEU
408
2V86
B
P21784
UNP
3
2
expression tag
GLY
409
2V86
B
P21784
UNP
4
2
expression tag
SER
410
2V86
B
P21784
UNP
5
2
expression tag
PRO
411
2V86
B
P21784
UNP
6
2
expression tag
GLU
412
2V86
B
P21784
UNP
7
2
expression tag
PHE
413
2V86
B
P21784
UNP
8
3
LYS
conflict
ALA
9
2V86
D
P84228
UNP
10
9
4
LYS
conflict
ALA
9
2V86
E
P84228
UNP
10
9
2
2
anti-parallel
anti-parallel
A
MET
443
A
MET
38
A
CYS
446
A
CYS
41
A
HIS
452
A
HIS
47
A
HIS
455
A
HIS
50
B
MET
443
B
MET
38
B
CYS
446
B
CYS
41
B
HIS
452
B
HIS
47
B
HIS
455
B
HIS
50
BINDING SITE FOR RESIDUE ZN A 1488
A
ZN
1488
Software
4
BINDING SITE FOR RESIDUE ZN A 1489
A
ZN
1489
Software
4
BINDING SITE FOR RESIDUE ZN B 1488
B
ZN
1488
Software
4
BINDING SITE FOR RESIDUE ZN B 1489
B
ZN
1489
Software
4
A
CYS
419
A
CYS
14
4
1_555
A
CYS
423
A
CYS
18
4
1_555
A
HIS
455
A
HIS
50
4
1_555
A
CYS
458
A
CYS
53
4
1_555
A
CYS
446
A
CYS
41
4
1_555
A
HIS
452
A
HIS
47
4
1_555
A
CYS
478
A
CYS
73
4
1_555
A
HIS
481
A
HIS
76
4
1_555
B
CYS
419
B
CYS
14
4
1_555
B
CYS
423
B
CYS
18
4
1_555
B
HIS
455
B
HIS
50
4
1_555
B
CYS
458
B
CYS
53
4
1_555
B
CYS
446
B
CYS
41
4
1_555
B
HIS
452
B
HIS
47
4
1_555
B
CYS
478
B
CYS
73
4
1_555
B
HIS
481
B
HIS
76
4
1_555
20
C 2 2 21