0.013333 0.000000 0.000000 0.000000 0.010811 0.000000 0.000000 0.000000 0.017513 0.00000 0.00000 0.00000 Prosser, B.E. Johnson, S. Roversi, P. Herbert, A.P. Blaum, B.S. Tyrrell, J. Jowitt, T.A. Clark, S.J. Tarelli, E. Uhrin, D. Barlow, P.N. Sim, R.B. Day, A.J. Lea, S.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 75.000 92.500 57.100 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H12 O18 S4 500.409 n 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose 2,3,4,6-tetra-O-sulfonato-alpha-D-glucose; 2,3,4,6-tetra-O-sulfonato-D-glucose; 2,3,4,6-tetra-O-sulfonato-glucose D-saccharide, alpha linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking C6 H12 O18 S4 500.409 n 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose D-saccharide, beta linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CL N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N C N 139 N O N 140 N C N 141 N O N 142 N C N 143 N O N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N O N 153 S C N 154 N O N 155 R C N 156 N C N 157 N O N 158 N S N 159 N O N 160 N O N 161 N O N 162 R C N 163 N O N 164 N S N 165 N O N 166 N O N 167 N O N 168 S C N 169 N O N 170 N S N 171 N O N 172 N O N 173 N O N 174 R C N 175 N O N 176 N S N 177 N O N 178 N O N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C Y 197 N C Y 198 N N Y 199 N C Y 200 N C Y 201 N N N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N O N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 S C N 221 N C N 222 N C N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 N C N 243 N C N 244 N C N 245 N C N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C N 265 N C N 266 N C N 267 N C N 268 N N N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N N N 286 S C N 287 N C N 288 N O N 289 N O N 290 N C N 291 N C N 292 N SE N 293 N C N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C N 333 N C N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N O N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N S N 360 N O N 361 N O N 362 N O N 363 N O N 364 N N N 365 S C N 366 N C N 367 N O N 368 R C N 369 N O N 370 N C N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N N Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N C N 452 R C N 453 S C N 454 R C N 455 R C N 456 N C N 457 N O N 458 N O N 459 N O N 460 N O N 461 N O N 462 N O N 463 N O N 464 N O N 465 N O N 466 N O N 467 N O N 468 N O N 469 N O N 470 N O N 471 N O N 472 N O N 473 N O N 474 N O N 475 N S N 476 N S N 477 N S N 478 N S N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing Y 193 N sing Y 194 N doub Y 195 N doub N 196 N sing Y 197 N sing N 198 N sing Y 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing Y 301 N doub Y 302 N sing Y 303 N sing N 304 N sing Y 305 N doub N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing Y 374 N doub Y 375 N sing Y 376 N sing N 377 N sing Y 378 N doub Y 379 N sing Y 380 N sing N 381 N sing Y 382 N sing Y 383 N doub N 384 N sing Y 385 N doub N 386 N sing Y 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N doub N 407 N sing Y 408 N doub N 409 N sing Y 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N doub N 463 N doub N 464 N doub N 465 N doub N 466 N sing N 467 N doub N 468 N doub N 469 N doub N 470 N doub N 471 N sing N 472 N sing US J.Exp.Med. JEMEAV 0774 0022-1007 204 2277 10.1084/JEM.20071069 17893204 Structural Basis for Complement Factor H Linked Age-Related Macular Degeneration. 2007 10.2210/pdb2v8e/pdb pdb_00002v8e 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2006-02-27 ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.979 1.0 ID29 ESRF 0.979 SYNCHROTRON ESRF BEAMLINE ID29 21287.537 COMPLEMENT FACTOR H DOMAINS 6,7 AND 8, RESIDUES 322-506 1 man polymer 982.803 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose 1 man branched 35.453 CHLORIDE ION 2 syn non-polymer 96.063 SULFATE ION 3 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 46 nat water H FACTOR 1, HUMAN COMPLEMENT FACTOR H sucrose octasulfate no yes (MSE)GLKPCDYPDIKHGGLYHEN(MSE)RRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYF PYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTC(MSE)ENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTY ALKEKAKYQCKLGYVTADGETSGSITCGKDGWSAQPTCI MGLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYFPYLENGYN QNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKL GYVTADGETSGSITCGKDGWSAQPTCI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 469008 ESCHERICHIA COLI BL21 (DE3) PET-14B 1 2.2 43 NONE 4.5 0.1M SODIUM ACETATE, PH4.5, 20% (W/V) PEG3000 atom_site chem_comp entity entity_name_com pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_molecule_features pdbx_nonpoly_scheme software struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Version format compliance Version format compliance Atomic model Data collection Derived calculations Non-polymer description Other Refinement description Structure summary Data collection Database references Refinement description Structure summary 1 0 2007-10-02 1 1 2011-05-08 1 2 2011-07-13 2 0 2020-07-29 2 1 2023-12-13 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.type _pdbx_database_status.status_code_sf _software.name _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession A SCR 1507 n B GU4 1 A SCR 1507 n B YYJ 2 DGlcp[2S,3S,4S,6S]a 2-sulfo-3-sulfo-4-sulfo-6-sulfo-a-D-glucopyranose a-D-Glcp2SO33SO34SO36SO3 C3D AND HEPARIN BINDING COMPLEMENT FACTOR H DOMAINS SCR19-20 FACTOR H, 15TH AND 16TH C-MODULE PAIR ( NMR, MINIMIZED AVERAGED STRUCTURE) SOLUTION STRUCTURE OF THE PRIMARY HOST RECOGNITION REGION OF COMPLEMENT FACTOR H STRUCTURE OF HUMAN COMPLEMENT FACTOR H CARBOXYL TERMINALDOMAINS 19-20: A BASIS FOR ATYPICAL HEMOLYTIC UREMICSYNDROME STRUCTURE OF CCP MODULE 7 OF COMPLEMENT FACTOR H - THE AMD NOT AT RISK VARIENT ( 402Y) FOUR MODELS OF HUMAN FACTOR H DETERMINED BY SOLUTION SCATTERING CURVE-FITTING AND HOMOLOGY MODELLING FACTOR H, 15TH C-MODULE PAIR (NMR, MINIMIZED AVERAGED STRUCTURE) HOMOLOGY MODEL OF HUMAN FACTOR H SCRS 6 AND 7 STRUCTURE OF CCP MODULE 7 OF COMPLEMENT FACTOR H - THE AMD AT RISK VARIENT (402H) CRYSTAL STRUCTURE OF HUMAN COMPLEMENT FACTOR H, SCR DOMAINS 6-8 (H402 RISK VARIANT), IN COMPLEX WITH LIGAND. PDBE Y PDBE 2007-08-07 REL REL oligosaccharide WURCS=2.0/2,2,1/[ha122h-2b_2-5_1*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O][a2122h-1a_1-5_2*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O]/1-2/a2-b1 2 PDB2Glycan 1.1.0 WURCS [][b-D-Fruf1SO33SO34SO36SO3]{[(2+1)][a-D-Glcp2SO33SO34SO36SO3]{}} 2 PDB-CARE LINUCS C1 O2 GU4 YYJ 1 2 2 O1 HO2 sing n n CL CHLORIDE ION SO4 SULFATE ION GOL GLYCEROL HOH water THIS IS RESIDUES 321-505 OF THE ABOVE ENTRY WITH AN N- TERMINAL METHIONINE. RESIDUES 400, 402 AND 493 ARE POLYMORPHIC. 2JGW PDB ENTRY 2JGW PDB experimental model Substrate analog oligosaccharide with reducing-end-to-reducing-end glycosidic bond sucrose octasulfate Oligosaccharide CL 1508 3 CL CL 1508 A CL 1509 3 CL CL 1509 A SO4 1510 4 SO4 SO4 1510 A SO4 1511 4 SO4 SO4 1511 A SO4 1512 4 SO4 SO4 1512 A GOL 1513 5 GOL GOL 1513 A HOH 2001 6 HOH HOH 2001 A HOH 2002 6 HOH HOH 2002 A HOH 2003 6 HOH HOH 2003 A HOH 2004 6 HOH HOH 2004 A HOH 2005 6 HOH HOH 2005 A HOH 2006 6 HOH HOH 2006 A HOH 2007 6 HOH HOH 2007 A HOH 2008 6 HOH HOH 2008 A HOH 2009 6 HOH HOH 2009 A HOH 2010 6 HOH HOH 2010 A HOH 2011 6 HOH HOH 2011 A HOH 2012 6 HOH HOH 2012 A HOH 2013 6 HOH HOH 2013 A HOH 2014 6 HOH HOH 2014 A HOH 2015 6 HOH HOH 2015 A HOH 2016 6 HOH HOH 2016 A HOH 2017 6 HOH HOH 2017 A HOH 2018 6 HOH HOH 2018 A HOH 2019 6 HOH HOH 2019 A HOH 2020 6 HOH HOH 2020 A HOH 2021 6 HOH HOH 2021 A HOH 2022 6 HOH HOH 2022 A HOH 2023 6 HOH HOH 2023 A HOH 2024 6 HOH HOH 2024 A HOH 2025 6 HOH HOH 2025 A HOH 2026 6 HOH HOH 2026 A HOH 2027 6 HOH HOH 2027 A HOH 2028 6 HOH HOH 2028 A HOH 2029 6 HOH HOH 2029 A HOH 2030 6 HOH HOH 2030 A HOH 2031 6 HOH HOH 2031 A HOH 2032 6 HOH HOH 2032 A HOH 2033 6 HOH HOH 2033 A HOH 2034 6 HOH HOH 2034 A HOH 2035 6 HOH HOH 2035 A HOH 2036 6 HOH HOH 2036 A HOH 2037 6 HOH HOH 2037 A HOH 2038 6 HOH HOH 2038 A HOH 2039 6 HOH HOH 2039 A HOH 2040 6 HOH HOH 2040 A HOH 2041 6 HOH HOH 2041 A HOH 2042 6 HOH HOH 2042 A HOH 2043 6 HOH HOH 2043 A HOH 2044 6 HOH HOH 2044 A HOH 2045 6 HOH HOH 2045 A HOH 2046 6 HOH HOH 2046 A MSE 320 n 1 MSE 320 A GLY 321 n 2 GLY 321 A LEU 322 n 3 LEU 322 A LYS 323 n 4 LYS 323 A PRO 324 n 5 PRO 324 A CYS 325 n 6 CYS 325 A ASP 326 n 7 ASP 326 A TYR 327 n 8 TYR 327 A PRO 328 n 9 PRO 328 A ASP 329 n 10 ASP 329 A ILE 330 n 11 ILE 330 A LYS 331 n 12 LYS 331 A HIS 332 n 13 HIS 332 A GLY 333 n 14 GLY 333 A GLY 334 n 15 GLY 334 A LEU 335 n 16 LEU 335 A TYR 336 n 17 TYR 336 A HIS 337 n 18 HIS 337 A GLU 338 n 19 GLU 338 A ASN 339 n 20 ASN 339 A MSE 340 n 21 MSE 340 A ARG 341 n 22 ARG 341 A ARG 342 n 23 ARG 342 A PRO 343 n 24 PRO 343 A TYR 344 n 25 TYR 344 A PHE 345 n 26 PHE 345 A PRO 346 n 27 PRO 346 A VAL 347 n 28 VAL 347 A ALA 348 n 29 ALA 348 A VAL 349 n 30 VAL 349 A GLY 350 n 31 GLY 350 A LYS 351 n 32 LYS 351 A TYR 352 n 33 TYR 352 A TYR 353 n 34 TYR 353 A SER 354 n 35 SER 354 A TYR 355 n 36 TYR 355 A TYR 356 n 37 TYR 356 A CYS 357 n 38 CYS 357 A ASP 358 n 39 ASP 358 A GLU 359 n 40 GLU 359 A HIS 360 n 41 HIS 360 A PHE 361 n 42 PHE 361 A GLU 362 n 43 GLU 362 A THR 363 n 44 THR 363 A PRO 364 n 45 PRO 364 A SER 365 n 46 SER 365 A GLY 366 n 47 GLY 366 A SER 367 n 48 SER 367 A TYR 368 n 49 TYR 368 A TRP 369 n 50 TRP 369 A ASP 370 n 51 ASP 370 A HIS 371 n 52 HIS 371 A ILE 372 n 53 ILE 372 A HIS 373 n 54 HIS 373 A CYS 374 n 55 CYS 374 A THR 375 n 56 THR 375 A GLN 376 n 57 GLN 376 A ASP 377 n 58 ASP 377 A GLY 378 n 59 GLY 378 A TRP 379 n 60 TRP 379 A SER 380 n 61 SER 380 A PRO 381 n 62 PRO 381 A ALA 382 n 63 ALA 382 A VAL 383 n 64 VAL 383 A PRO 384 n 65 PRO 384 A CYS 385 n 66 CYS 385 A LEU 386 n 67 LEU 386 A ARG 387 n 68 ARG 387 A LYS 388 n 69 LYS 388 A CYS 389 n 70 CYS 389 A TYR 390 n 71 TYR 390 A PHE 391 n 72 PHE 391 A PRO 392 n 73 PRO 392 A TYR 393 n 74 TYR 393 A LEU 394 n 75 LEU 394 A GLU 395 n 76 GLU 395 A ASN 396 n 77 ASN 396 A GLY 397 n 78 GLY 397 A TYR 398 n 79 TYR 398 A ASN 399 n 80 ASN 399 A GLN 400 n 81 GLN 400 A ASN 401 n 82 ASN 401 A HIS 402 n 83 HIS 402 A GLY 403 n 84 GLY 403 A ARG 404 n 85 ARG 404 A LYS 405 n 86 LYS 405 A PHE 406 n 87 PHE 406 A VAL 407 n 88 VAL 407 A GLN 408 n 89 GLN 408 A GLY 409 n 90 GLY 409 A LYS 410 n 91 LYS 410 A SER 411 n 92 SER 411 A ILE 412 n 93 ILE 412 A ASP 413 n 94 ASP 413 A VAL 414 n 95 VAL 414 A ALA 415 n 96 ALA 415 A CYS 416 n 97 CYS 416 A HIS 417 n 98 HIS 417 A PRO 418 n 99 PRO 418 A GLY 419 n 100 GLY 419 A TYR 420 n 101 TYR 420 A ALA 421 n 102 ALA 421 A LEU 422 n 103 LEU 422 A PRO 423 n 104 PRO 423 A LYS 424 n 105 LYS 424 A ALA 425 n 106 ALA 425 A GLN 426 n 107 GLN 426 A THR 427 n 108 THR 427 A THR 428 n 109 THR 428 A VAL 429 n 110 VAL 429 A THR 430 n 111 THR 430 A CYS 431 n 112 CYS 431 A MSE 432 n 113 MSE 432 A GLU 433 n 114 GLU 433 A ASN 434 n 115 ASN 434 A GLY 435 n 116 GLY 435 A TRP 436 n 117 TRP 436 A SER 437 n 118 SER 437 A PRO 438 n 119 PRO 438 A THR 439 n 120 THR 439 A PRO 440 n 121 PRO 440 A ARG 441 n 122 ARG 441 A CYS 442 n 123 CYS 442 A ILE 443 n 124 ILE 443 A ARG 444 n 125 ARG 444 A VAL 445 n 126 VAL 445 A LYS 446 n 127 LYS 446 A THR 447 n 128 THR 447 A CYS 448 n 129 CYS 448 A SER 449 n 130 SER 449 A LYS 450 n 131 LYS 450 A SER 451 n 132 SER 451 A SER 452 n 133 SER 452 A ILE 453 n 134 ILE 453 A ASP 454 n 135 ASP 454 A ILE 455 n 136 ILE 455 A GLU 456 n 137 GLU 456 A ASN 457 n 138 ASN 457 A GLY 458 n 139 GLY 458 A PHE 459 n 140 PHE 459 A ILE 460 n 141 ILE 460 A SER 461 n 142 SER 461 A GLU 462 n 143 GLU 462 A SER 463 n 144 SER 463 A GLN 464 n 145 GLN 464 A TYR 465 n 146 TYR 465 A THR 466 n 147 THR 466 A TYR 467 n 148 TYR 467 A ALA 468 n 149 ALA 468 A LEU 469 n 150 LEU 469 A LYS 470 n 151 LYS 470 A GLU 471 n 152 GLU 471 A LYS 472 n 153 LYS 472 A ALA 473 n 154 ALA 473 A LYS 474 n 155 LYS 474 A TYR 475 n 156 TYR 475 A GLN 476 n 157 GLN 476 A CYS 477 n 158 CYS 477 A LYS 478 n 159 LYS 478 A LEU 479 n 160 LEU 479 A GLY 480 n 161 GLY 480 A TYR 481 n 162 TYR 481 A VAL 482 n 163 VAL 482 A THR 483 n 164 THR 483 A ALA 484 n 165 ALA 484 A ASP 485 n 166 ASP 485 A GLY 486 n 167 GLY 486 A GLU 487 n 168 GLU 487 A THR 488 n 169 THR 488 A SER 489 n 170 SER 489 A GLY 490 n 171 GLY 490 A SER 491 n 172 SER 491 A ILE 492 n 173 ILE 492 A THR 493 n 174 THR 493 A CYS 494 n 175 CYS 494 A GLY 495 n 176 GLY 495 A LYS 496 n 177 LYS 496 A ASP 497 n 178 ASP 497 A GLY 498 n 179 GLY 498 A TRP 499 n 180 TRP 499 A SER 500 n 181 SER 500 A ALA 501 n 182 ALA 501 A GLN 502 n 183 GLN 502 A PRO 503 n 184 PRO 503 A THR 504 n 185 THR 504 A CYS 505 n 186 CYS 505 A ILE 506 n 187 ILE 506 A 0.2255 0.0000 0.2255 691 9.8 software_defined_assembly PQS 1 monomeric A MSE 320 SELENOMETHIONINE A MSE 1 MET A MSE 340 SELENOMETHIONINE A MSE 21 MET A MSE 432 SELENOMETHIONINE A MSE 113 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLY 334 A N GLY 15 A O TYR 356 A O TYR 37 A N TYR 355 A N TYR 36 A O ASP 370 A O ASP 51 A N THR 375 A N THR 56 A O GLY 378 A O GLY 59 A N GLU 362 A N GLU 43 A O LEU 386 A O LEU 67 A N CYS 389 A N CYS 70 A O PHE 406 A O PHE 87 A N ILE 412 A N ILE 93 A O VAL 429 A O VAL 110 A N MSE 432 A N MSE 113 A O GLY 435 A O GLY 116 A N ALA 421 A N ALA 102 A O ILE 443 A O ILE 124 A N CYS 448 A N CYS 129 A O TYR 467 A O TYR 148 A N PHE 459 A N PHE 140 A O GLN 476 A O GLN 157 A N TYR 475 A N TYR 156 A O GLY 490 A O GLY 171 A N GLY 495 A N GLY 176 A O GLY 498 A O GLY 179 1 A HOH 2022 I HOH 1 A CG MSE 320 A CG MSE 1 1 Y 1 A SE MSE 320 A SE MSE 1 1 Y 1 A CE MSE 320 A CE MSE 1 1 Y 1 A A O N PRO TYR 343 344 1.71 1 A PRO 343 -12.49 1 A A LYS PRO 323 324 -144.18 1 A A C N PRO TYR 343 344 1.06 1 9.64 1.50 119.30 128.94 A A A C N CA LYS PRO PRO 323 324 324 Y 1 -10.13 1.40 111.70 101.57 A A A CA N CD PRO PRO PRO 324 324 324 N 1 -16.17 2.40 127.00 110.83 A A A C N CA ARG PRO PRO 342 343 343 Y 1 20.75 2.20 117.20 137.95 A A A CA C N PRO PRO TYR 343 343 344 Y 1 -24.48 1.60 122.70 98.22 A A A O C N PRO PRO TYR 343 343 344 Y 1 -14.52 2.10 128.40 113.88 A A A C N CD VAL PRO PRO 383 384 384 Y 1 -24.53 1.70 111.00 86.47 A A A CB CG CD1 LEU LEU LEU 479 479 479 N 1 A A CB CG LYS LYS 323 323 -0.328 0.027 1.521 1.193 N 1 A A N CA PRO PRO 324 324 -0.150 0.017 1.468 1.318 N 1 A A C N ARG PRO 342 343 0.147 0.019 1.338 1.485 Y 1 A A C N PRO TYR 343 344 -0.271 0.023 1.336 1.065 Y 1 A HIS 360 82.71 -2.02 1 A ASP 370 -170.32 -162.13 1 A HIS 402 -52.26 109.15 1 A LYS 424 -165.60 92.80 1 A GLN 426 -59.07 179.92 1 A GLU 462 -126.35 -75.75 1 A LYS 470 78.73 -3.07 1 A LEU 479 -38.43 112.46 1 A ALA 484 -89.24 35.21 1 A ALA 501 175.47 -171.28 BUSTER-TNT-GELLY 2.1.1 E. BLANC, P. ROVERSI, C. VONRHEIN, C. FLENSBURG, S. M. LEA AND G.BRICOGNE 0.2455 0.2233 0.2255 0.2233 2.50 15.0 691 7044 9.8 0.2255 1 TNT BCORREL THROUGHOUT 0 MOLECULAR REPLACEMENT PDB ENTRY 2JGW TNT PROTGEO BABINET SCALING 150 0.43 2.50 15.0 46 1603 78 0 1479 0.015 1608 1.0 1.355 2190 2.0 18.677 285 0 0 0.003 32 2.0 0.015 247 5.0 1.972 1608 20 0.168 38 5.0 6.136 2.50 35.90 2V8E 7083 0.0 0.08 1 12.50 3.7 99.4 0.35 2.50 2.64 3.00 1 3.8 99.9 model building DM data reduction MOSFLM data scaling SCALA phasing MOLREP phasing SHARP-SOLOMON phasing BUSTER-TNT phasing DM phasing pirate Crystal structure of Human Complement Factor H, SCR domains 6-8 (H402 risk variant), in complex with ligand. 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 5 N N 6 N N A HIS 337 A HIS 18 HELX_P A ARG 342 A ARG 23 1 1 6 disulf 2.033 A CYS 325 A SG CYS 6 1_555 A CYS 374 A SG CYS 55 1_555 disulf 2.032 A CYS 357 A SG CYS 38 1_555 A CYS 385 A SG CYS 66 1_555 disulf 2.032 A CYS 389 A SG CYS 70 1_555 A CYS 431 A SG CYS 112 1_555 disulf 2.032 A CYS 416 A SG CYS 97 1_555 A CYS 442 A SG CYS 123 1_555 disulf 2.033 A CYS 448 A SG CYS 129 1_555 A CYS 494 A SG CYS 175 1_555 disulf 2.030 A CYS 477 A SG CYS 158 1_555 A CYS 505 A SG CYS 186 1_555 covale 1.333 both A MSE 320 A C MSE 1 1_555 A GLY 321 A N GLY 2 1_555 covale 1.325 both A ASN 339 A C ASN 20 1_555 A MSE 340 A N MSE 21 1_555 covale 1.329 both A MSE 340 A C MSE 21 1_555 A ARG 341 A N ARG 22 1_555 covale 1.327 both A CYS 431 A C CYS 112 1_555 A MSE 432 A N MSE 113 1_555 covale 1.324 both A MSE 432 A C MSE 113 1_555 A GLU 433 A N GLU 114 1_555 covale 1.433 both sing B GU4 1 B C1 GU4 1_555 B YYJ 2 B O2 YYJ 1_555 IMMUNE SYSTEM ALTERNATIVE SPLICING, SUCROSE OCTASULPHATE, AGE-RELATED MACULAR DEGENERATION, SUSHI, SECRETED, FACTOR H, COMPLEMENT, POLYMORPHISM, COMPLEMENT ALTERNATE PATHWAY, IMMUNE SYSTEM, DISEASE MUTATION, GLYCOSAMINOGLYCAN, GLYCOPROTEIN, INNATE IMMUNITY, IMMUNE RESPONSE A ARG 342 A ARG 23 1 A PRO 343 A PRO 24 -16.10 A PHE 345 A PHE 26 1 A PRO 346 A PRO 27 0.37 A SER 380 A SER 61 1 A PRO 381 A PRO 62 2.44 A PRO 423 A PRO 104 1 A LYS 424 A LYS 105 0.99 A LYS 424 A LYS 105 1 A ALA 425 A ALA 106 0.92 A SER 437 A SER 118 1 A PRO 438 A PRO 119 -2.72 A GLU 462 A GLU 143 1 A SER 463 A SER 144 -3.31 A ASP 485 A ASP 166 1 A GLY 486 A GLY 167 -1.39 2V8E PDB 1 2V8E CFAH_HUMAN UNP 1 P08603 320 321 2V8E 320 321 2V8E A 1 1 2 322 506 2V8E 322 506 P08603 A 2 3 187 4 3 3 2 2 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLY 333 A GLY 14 A LEU 335 A LEU 16 A TYR 352 A TYR 33 A CYS 357 A CYS 38 A TRP 369 A TRP 50 A THR 375 A THR 56 A GLY 378 A GLY 59 A SER 380 A SER 61 A PHE 361 A PHE 42 A GLU 362 A GLU 43 A LEU 386 A LEU 67 A TYR 390 A TYR 71 A LYS 405 A LYS 86 A VAL 407 A VAL 88 A SER 411 A SER 92 A ASP 413 A ASP 94 A THR 428 A THR 109 A MSE 432 A MSE 113 A GLY 435 A GLY 116 A SER 437 A SER 118 A TYR 420 A TYR 101 A ALA 421 A ALA 102 A ILE 443 A ILE 124 A ARG 444 A ARG 125 A THR 447 A THR 128 A SER 449 A SER 130 A THR 466 A THR 147 A ALA 468 A ALA 149 A GLY 458 A GLY 139 A PHE 459 A PHE 140 A LYS 472 A LYS 153 A CYS 477 A CYS 158 A SER 489 A SER 170 A GLY 495 A GLY 176 A GLY 498 A GLY 179 A TRP 499 A TRP 180 20 C 2 2 21