0.012676
0.007318
0.000000
0.000000
0.014637
0.000000
0.000000
0.000000
0.005746
0.00000
0.00000
0.00000
Kuper, J.
Wolski, S.C.
Truglio, J.J.
Kisker, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
78.890
78.890
174.040
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
Fe4 S4
351.640
IRON/SULFUR CLUSTER
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Plos Biol.
1544-9173
6
E149
10.1371/JOURNAL.PBIO.0060149
18578568
Crystal Structure of the Fes Cluster-Containing Nucleotide Excision Repair Helicase Xpd.
2008
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
BM14
ESRF
1.00
SYNCHROTRON
ESRF BEAMLINE BM14
69260.117
DNA REPAIR HELICASE RAD3 RELATED PROTEIN
1
man
polymer
351.640
IRON/SULFUR CLUSTER
1
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
1
nat
water
XPD
no
no
MQKSYGVALESPTGSGKTIMALKSALQYSSERKLKVLYLVRTNSQEEQVIKELRSLSSTMKIRAIPMQGRVNMCILYRMV
DDLHEINAESLAKFCNMKKREVMAGNEAACPYFNFKIRSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADI
VIAPYAYFLNRSVAEKFLSHWGVSRNQIVIILDEAHNLPDIGRSIGSFRISVESLNRADREAQAYGDPELSQKIHVSDLI
EMIRSALQSMVSERCGKGDVRIRFQEFMEYMRIMNKRSEREIRSLLNYLYLFGEYVENEKEKVGKVPFSYCSSVASRIIA
FSDQDEEKYAAILSPEDGGYMQAACLDPSGILEVLKESKTIHMSGTLDPFDFYSDITGFEIPFKKIGEIFPPENRYIAYY
DGVSSKYDTLDEKELDRMATVIEDIILKVKKNTIVYFPSYSLMDRVENRVSFEHMKEYRGIDQKELYSMLKKFRRDHGTI
FAVSGGRLSEGINFPGNELEMIILAGLPFPRPDAINRSLFDYYERKYGKGWEYSVVYPTAIKIRQEIGRLIRSAEDTGAC
VILDKRAGQFRKFIPDMKKTSDPASDIYNFFISAQAREKYGA
MQKSYGVALESPTGSGKTIMALKSALQYSSERKLKVLYLVRTNSQEEQVIKELRSLSSTMKIRAIPMQGRVNMCILYRMV
DDLHEINAESLAKFCNMKKREVMAGNEAACPYFNFKIRSDETKRFLFDELPTAEEFYDYGERNNVCPYESMKAALPDADI
VIAPYAYFLNRSVAEKFLSHWGVSRNQIVIILDEAHNLPDIGRSIGSFRISVESLNRADREAQAYGDPELSQKIHVSDLI
EMIRSALQSMVSERCGKGDVRIRFQEFMEYMRIMNKRSEREIRSLLNYLYLFGEYVENEKEKVGKVPFSYCSSVASRIIA
FSDQDEEKYAAILSPEDGGYMQAACLDPSGILEVLKESKTIHMSGTLDPFDFYSDITGFEIPFKKIGEIFPPENRYIAYY
DGVSSKYDTLDEKELDRMATVIEDIILKVKKNTIVYFPSYSLMDRVENRVSFEHMKEYRGIDQKELYSMLKKFRRDHGTI
FAVSGGRLSEGINFPGNELEMIILAGLPFPRPDAINRSLFDYYERKYGKGWEYSVVYPTAIKIRQEIGRLIRSAEDTGAC
VILDKRAGQFRKFIPDMKKTSDPASDIYNFFISAQAREKYGA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
2303
THERMOPLASMA ACIDOPHILUM
469008
ESCHERICHIA COLI
BL21(DE3)
2.17
43.4
NONE
0.2M MGCL2, 10-15% PEG 400, 0.1M SODIUM CITRATE PH5.6
repository
Initial release
Advisory
Version format compliance
1
0
2008-07-08
1
1
2011-07-13
PDBE
Y
PDBE
2008-04-23
REL
SF4
IRON/SULFUR CLUSTER
CA
CALCIUM ION
HOH
water
SF4
1616
2
SF4
SF4
1616
A
CA
1617
3
CA
CA
1617
A
HOH
2001
4
HOH
HOH
2001
A
n
1
19
A
n
2
20
A
n
3
21
A
n
4
22
A
TYR
23
n
5
TYR
23
A
GLY
24
n
6
GLY
24
A
VAL
25
n
7
VAL
25
A
ALA
26
n
8
ALA
26
A
LEU
27
n
9
LEU
27
A
GLU
28
n
10
GLU
28
A
SER
29
n
11
SER
29
A
PRO
30
n
12
PRO
30
A
THR
31
n
13
THR
31
A
GLY
32
n
14
GLY
32
A
SER
33
n
15
SER
33
A
GLY
34
n
16
GLY
34
A
LYS
35
n
17
LYS
35
A
THR
36
n
18
THR
36
A
ILE
37
n
19
ILE
37
A
MET
38
n
20
MET
38
A
ALA
39
n
21
ALA
39
A
LEU
40
n
22
LEU
40
A
LYS
41
n
23
LYS
41
A
SER
42
n
24
SER
42
A
ALA
43
n
25
ALA
43
A
LEU
44
n
26
LEU
44
A
GLN
45
n
27
GLN
45
A
TYR
46
n
28
TYR
46
A
SER
47
n
29
SER
47
A
SER
48
n
30
SER
48
A
GLU
49
n
31
GLU
49
A
ARG
50
n
32
ARG
50
A
LYS
51
n
33
LYS
51
A
LEU
52
n
34
LEU
52
A
LYS
53
n
35
LYS
53
A
VAL
54
n
36
VAL
54
A
LEU
55
n
37
LEU
55
A
TYR
56
n
38
TYR
56
A
LEU
57
n
39
LEU
57
A
VAL
58
n
40
VAL
58
A
ARG
59
n
41
ARG
59
A
THR
60
n
42
THR
60
A
ASN
61
n
43
ASN
61
A
SER
62
n
44
SER
62
A
GLN
63
n
45
GLN
63
A
GLU
64
n
46
GLU
64
A
GLU
65
n
47
GLU
65
A
GLN
66
n
48
GLN
66
A
VAL
67
n
49
VAL
67
A
ILE
68
n
50
ILE
68
A
LYS
69
n
51
LYS
69
A
GLU
70
n
52
GLU
70
A
LEU
71
n
53
LEU
71
A
ARG
72
n
54
ARG
72
A
SER
73
n
55
SER
73
A
LEU
74
n
56
LEU
74
A
SER
75
n
57
SER
75
A
SER
76
n
58
SER
76
A
THR
77
n
59
THR
77
A
MET
78
n
60
MET
78
A
LYS
79
n
61
LYS
79
A
ILE
80
n
62
ILE
80
A
ARG
81
n
63
ARG
81
A
ALA
82
n
64
ALA
82
A
ILE
83
n
65
ILE
83
A
PRO
84
n
66
PRO
84
A
MET
85
n
67
MET
85
A
GLN
86
n
68
GLN
86
A
GLY
87
n
69
GLY
87
A
ARG
88
n
70
ARG
88
A
VAL
89
n
71
VAL
89
A
ASN
90
n
72
ASN
90
A
MET
91
n
73
MET
91
A
CYS
92
n
74
CYS
92
A
ILE
93
n
75
ILE
93
A
LEU
94
n
76
LEU
94
A
TYR
95
n
77
TYR
95
A
ARG
96
n
78
ARG
96
A
MET
97
n
79
MET
97
A
VAL
98
n
80
VAL
98
A
ASP
99
n
81
ASP
99
A
ASP
100
n
82
ASP
100
A
LEU
101
n
83
LEU
101
A
HIS
102
n
84
HIS
102
A
GLU
103
n
85
GLU
103
A
ILE
104
n
86
ILE
104
A
ASN
105
n
87
ASN
105
A
ALA
106
n
88
ALA
106
A
GLU
107
n
89
GLU
107
A
SER
108
n
90
SER
108
A
LEU
109
n
91
LEU
109
A
ALA
110
n
92
ALA
110
A
LYS
111
n
93
LYS
111
A
PHE
112
n
94
PHE
112
A
CYS
113
n
95
CYS
113
A
ASN
114
n
96
ASN
114
A
MET
115
n
97
MET
115
A
LYS
116
n
98
LYS
116
A
LYS
117
n
99
LYS
117
A
ARG
118
n
100
ARG
118
A
GLU
119
n
101
GLU
119
A
VAL
120
n
102
VAL
120
A
MET
121
n
103
MET
121
A
ALA
122
n
104
ALA
122
A
GLY
123
n
105
GLY
123
A
ASN
124
n
106
ASN
124
A
GLU
125
n
107
GLU
125
A
ALA
126
n
108
ALA
126
A
ALA
127
n
109
ALA
127
A
CYS
128
n
110
CYS
128
A
PRO
129
n
111
PRO
129
A
TYR
130
n
112
TYR
130
A
PHE
131
n
113
PHE
131
A
ASN
132
n
114
ASN
132
A
PHE
133
n
115
PHE
133
A
LYS
134
n
116
LYS
134
A
ILE
135
n
117
ILE
135
A
ARG
136
n
118
ARG
136
A
SER
137
n
119
SER
137
A
ASP
138
n
120
ASP
138
A
GLU
139
n
121
GLU
139
A
THR
140
n
122
THR
140
A
LYS
141
n
123
LYS
141
A
ARG
142
n
124
ARG
142
A
PHE
143
n
125
PHE
143
A
LEU
144
n
126
LEU
144
A
PHE
145
n
127
PHE
145
A
ASP
146
n
128
ASP
146
A
GLU
147
n
129
GLU
147
A
LEU
148
n
130
LEU
148
A
PRO
149
n
131
PRO
149
A
THR
150
n
132
THR
150
A
ALA
151
n
133
ALA
151
A
GLU
152
n
134
GLU
152
A
GLU
153
n
135
GLU
153
A
PHE
154
n
136
PHE
154
A
TYR
155
n
137
TYR
155
A
ASP
156
n
138
ASP
156
A
TYR
157
n
139
TYR
157
A
GLY
158
n
140
GLY
158
A
GLU
159
n
141
GLU
159
A
ARG
160
n
142
ARG
160
A
ASN
161
n
143
ASN
161
A
ASN
162
n
144
ASN
162
A
VAL
163
n
145
VAL
163
A
CYS
164
n
146
CYS
164
A
PRO
165
n
147
PRO
165
A
TYR
166
n
148
TYR
166
A
GLU
167
n
149
GLU
167
A
SER
168
n
150
SER
168
A
MET
169
n
151
MET
169
A
LYS
170
n
152
LYS
170
A
ALA
171
n
153
ALA
171
A
ALA
172
n
154
ALA
172
A
LEU
173
n
155
LEU
173
A
PRO
174
n
156
PRO
174
A
ASP
175
n
157
ASP
175
A
ALA
176
n
158
ALA
176
A
ASP
177
n
159
ASP
177
A
ILE
178
n
160
ILE
178
A
VAL
179
n
161
VAL
179
A
ILE
180
n
162
ILE
180
A
ALA
181
n
163
ALA
181
A
PRO
182
n
164
PRO
182
A
TYR
183
n
165
TYR
183
A
ALA
184
n
166
ALA
184
A
TYR
185
n
167
TYR
185
A
PHE
186
n
168
PHE
186
A
LEU
187
n
169
LEU
187
A
ASN
188
n
170
ASN
188
A
ARG
189
n
171
ARG
189
A
SER
190
n
172
SER
190
A
VAL
191
n
173
VAL
191
A
ALA
192
n
174
ALA
192
A
GLU
193
n
175
GLU
193
A
LYS
194
n
176
LYS
194
A
PHE
195
n
177
PHE
195
A
LEU
196
n
178
LEU
196
A
SER
197
n
179
SER
197
A
HIS
198
n
180
HIS
198
A
TRP
199
n
181
TRP
199
A
GLY
200
n
182
GLY
200
A
VAL
201
n
183
VAL
201
A
SER
202
n
184
SER
202
A
ARG
203
n
185
ARG
203
A
ASN
204
n
186
ASN
204
A
GLN
205
n
187
GLN
205
A
ILE
206
n
188
ILE
206
A
VAL
207
n
189
VAL
207
A
ILE
208
n
190
ILE
208
A
ILE
209
n
191
ILE
209
A
LEU
210
n
192
LEU
210
A
ASP
211
n
193
ASP
211
A
GLU
212
n
194
GLU
212
A
ALA
213
n
195
ALA
213
A
HIS
214
n
196
HIS
214
A
ASN
215
n
197
ASN
215
A
LEU
216
n
198
LEU
216
A
PRO
217
n
199
PRO
217
A
ASP
218
n
200
ASP
218
A
ILE
219
n
201
ILE
219
A
GLY
220
n
202
GLY
220
A
ARG
221
n
203
ARG
221
A
SER
222
n
204
SER
222
A
ILE
223
n
205
ILE
223
A
GLY
224
n
206
GLY
224
A
SER
225
n
207
SER
225
A
PHE
226
n
208
PHE
226
A
ARG
227
n
209
ARG
227
A
ILE
228
n
210
ILE
228
A
SER
229
n
211
SER
229
A
VAL
230
n
212
VAL
230
A
GLU
231
n
213
GLU
231
A
SER
232
n
214
SER
232
A
LEU
233
n
215
LEU
233
A
ASN
234
n
216
ASN
234
A
ARG
235
n
217
ARG
235
A
ALA
236
n
218
ALA
236
A
ASP
237
n
219
ASP
237
A
ARG
238
n
220
ARG
238
A
GLU
239
n
221
GLU
239
A
ALA
240
n
222
ALA
240
A
GLN
241
n
223
GLN
241
A
ALA
242
n
224
ALA
242
A
TYR
243
n
225
TYR
243
A
GLY
244
n
226
GLY
244
A
ASP
245
n
227
ASP
245
A
PRO
246
n
228
PRO
246
A
GLU
247
n
229
GLU
247
A
LEU
248
n
230
LEU
248
A
SER
249
n
231
SER
249
A
GLN
250
n
232
GLN
250
A
LYS
251
n
233
LYS
251
A
ILE
252
n
234
ILE
252
A
HIS
253
n
235
HIS
253
A
VAL
254
n
236
VAL
254
A
SER
255
n
237
SER
255
A
ASP
256
n
238
ASP
256
A
LEU
257
n
239
LEU
257
A
ILE
258
n
240
ILE
258
A
GLU
259
n
241
GLU
259
A
MET
260
n
242
MET
260
A
ILE
261
n
243
ILE
261
A
ARG
262
n
244
ARG
262
A
SER
263
n
245
SER
263
A
ALA
264
n
246
ALA
264
A
LEU
265
n
247
LEU
265
A
GLN
266
n
248
GLN
266
A
SER
267
n
249
SER
267
A
MET
268
n
250
MET
268
A
VAL
269
n
251
VAL
269
A
SER
270
n
252
SER
270
A
GLU
271
n
253
GLU
271
A
ARG
272
n
254
ARG
272
A
CYS
273
n
255
CYS
273
A
GLY
274
n
256
GLY
274
A
LYS
275
n
257
LYS
275
A
GLY
276
n
258
GLY
276
A
ASP
277
n
259
ASP
277
A
VAL
278
n
260
VAL
278
A
ARG
279
n
261
ARG
279
A
ILE
280
n
262
ILE
280
A
ARG
281
n
263
ARG
281
A
PHE
282
n
264
PHE
282
A
GLN
283
n
265
GLN
283
A
GLU
284
n
266
GLU
284
A
PHE
285
n
267
PHE
285
A
MET
286
n
268
MET
286
A
GLU
287
n
269
GLU
287
A
TYR
288
n
270
TYR
288
A
MET
289
n
271
MET
289
A
ARG
290
n
272
ARG
290
A
ILE
291
n
273
ILE
291
A
MET
292
n
274
MET
292
A
ASN
293
n
275
ASN
293
A
LYS
294
n
276
LYS
294
A
ARG
295
n
277
ARG
295
A
SER
296
n
278
SER
296
A
GLU
297
n
279
GLU
297
A
ARG
298
n
280
ARG
298
A
GLU
299
n
281
GLU
299
A
ILE
300
n
282
ILE
300
A
ARG
301
n
283
ARG
301
A
SER
302
n
284
SER
302
A
LEU
303
n
285
LEU
303
A
LEU
304
n
286
LEU
304
A
ASN
305
n
287
ASN
305
A
TYR
306
n
288
TYR
306
A
LEU
307
n
289
LEU
307
A
TYR
308
n
290
TYR
308
A
LEU
309
n
291
LEU
309
A
PHE
310
n
292
PHE
310
A
GLY
311
n
293
GLY
311
A
GLU
312
n
294
GLU
312
A
TYR
313
n
295
TYR
313
A
VAL
314
n
296
VAL
314
A
GLU
315
n
297
GLU
315
A
ASN
316
n
298
ASN
316
A
GLU
317
n
299
GLU
317
A
LYS
318
n
300
LYS
318
A
GLU
319
n
301
GLU
319
A
LYS
320
n
302
LYS
320
A
VAL
321
n
303
VAL
321
A
GLY
322
n
304
GLY
322
A
LYS
323
n
305
LYS
323
A
VAL
324
n
306
VAL
324
A
PRO
325
n
307
PRO
325
A
PHE
326
n
308
PHE
326
A
SER
327
n
309
SER
327
A
TYR
328
n
310
TYR
328
A
CYS
329
n
311
CYS
329
A
SER
330
n
312
SER
330
A
SER
331
n
313
SER
331
A
VAL
332
n
314
VAL
332
A
ALA
333
n
315
ALA
333
A
SER
334
n
316
SER
334
A
ARG
335
n
317
ARG
335
A
ILE
336
n
318
ILE
336
A
ILE
337
n
319
ILE
337
A
ALA
338
n
320
ALA
338
A
PHE
339
n
321
PHE
339
A
SER
340
n
322
SER
340
A
ASP
341
n
323
ASP
341
A
GLN
342
n
324
GLN
342
A
ASP
343
n
325
ASP
343
A
GLU
344
n
326
GLU
344
A
GLU
345
n
327
GLU
345
A
LYS
346
n
328
LYS
346
A
TYR
347
n
329
TYR
347
A
ALA
348
n
330
ALA
348
A
ALA
349
n
331
ALA
349
A
ILE
350
n
332
ILE
350
A
LEU
351
n
333
LEU
351
A
SER
352
n
334
SER
352
A
PRO
353
n
335
PRO
353
A
GLU
354
n
336
GLU
354
A
ASP
355
n
337
ASP
355
A
GLY
356
n
338
GLY
356
A
GLY
357
n
339
GLY
357
A
TYR
358
n
340
TYR
358
A
MET
359
n
341
MET
359
A
GLN
360
n
342
GLN
360
A
ALA
361
n
343
ALA
361
A
ALA
362
n
344
ALA
362
A
CYS
363
n
345
CYS
363
A
LEU
364
n
346
LEU
364
A
ASP
365
n
347
ASP
365
A
PRO
366
n
348
PRO
366
A
SER
367
n
349
SER
367
A
GLY
368
n
350
GLY
368
A
ILE
369
n
351
ILE
369
A
LEU
370
n
352
LEU
370
A
GLU
371
n
353
GLU
371
A
VAL
372
n
354
VAL
372
A
LEU
373
n
355
LEU
373
A
LYS
374
n
356
LYS
374
A
GLU
375
n
357
GLU
375
A
SER
376
n
358
SER
376
A
LYS
377
n
359
LYS
377
A
THR
378
n
360
THR
378
A
ILE
379
n
361
ILE
379
A
HIS
380
n
362
HIS
380
A
MET
381
n
363
MET
381
A
SER
382
n
364
SER
382
A
GLY
383
n
365
GLY
383
A
THR
384
n
366
THR
384
A
LEU
385
n
367
LEU
385
A
ASP
386
n
368
ASP
386
A
PRO
387
n
369
PRO
387
A
PHE
388
n
370
PHE
388
A
ASP
389
n
371
ASP
389
A
PHE
390
n
372
PHE
390
A
TYR
391
n
373
TYR
391
A
SER
392
n
374
SER
392
A
ASP
393
n
375
ASP
393
A
ILE
394
n
376
ILE
394
A
THR
395
n
377
THR
395
A
GLY
396
n
378
GLY
396
A
PHE
397
n
379
PHE
397
A
GLU
398
n
380
GLU
398
A
ILE
399
n
381
ILE
399
A
PRO
400
n
382
PRO
400
A
PHE
401
n
383
PHE
401
A
LYS
402
n
384
LYS
402
A
LYS
403
n
385
LYS
403
A
ILE
404
n
386
ILE
404
A
GLY
405
n
387
GLY
405
A
GLU
406
n
388
GLU
406
A
ILE
407
n
389
ILE
407
A
PHE
408
n
390
PHE
408
A
PRO
409
n
391
PRO
409
A
PRO
410
n
392
PRO
410
A
GLU
411
n
393
GLU
411
A
ASN
412
n
394
ASN
412
A
ARG
413
n
395
ARG
413
A
TYR
414
n
396
TYR
414
A
ILE
415
n
397
ILE
415
A
ALA
416
n
398
ALA
416
A
TYR
417
n
399
TYR
417
A
TYR
418
n
400
TYR
418
A
ASP
419
n
401
ASP
419
A
GLY
420
n
402
GLY
420
A
VAL
421
n
403
VAL
421
A
SER
422
n
404
SER
422
A
SER
423
n
405
SER
423
A
LYS
424
n
406
LYS
424
A
TYR
425
n
407
TYR
425
A
ASP
426
n
408
ASP
426
A
THR
427
n
409
THR
427
A
LEU
428
n
410
LEU
428
A
ASP
429
n
411
ASP
429
A
GLU
430
n
412
GLU
430
A
LYS
431
n
413
LYS
431
A
GLU
432
n
414
GLU
432
A
LEU
433
n
415
LEU
433
A
ASP
434
n
416
ASP
434
A
ARG
435
n
417
ARG
435
A
MET
436
n
418
MET
436
A
ALA
437
n
419
ALA
437
A
THR
438
n
420
THR
438
A
VAL
439
n
421
VAL
439
A
ILE
440
n
422
ILE
440
A
GLU
441
n
423
GLU
441
A
ASP
442
n
424
ASP
442
A
ILE
443
n
425
ILE
443
A
ILE
444
n
426
ILE
444
A
LEU
445
n
427
LEU
445
A
LYS
446
n
428
LYS
446
A
VAL
447
n
429
VAL
447
A
LYS
448
n
430
LYS
448
A
LYS
449
n
431
LYS
449
A
ASN
450
n
432
ASN
450
A
THR
451
n
433
THR
451
A
ILE
452
n
434
ILE
452
A
VAL
453
n
435
VAL
453
A
TYR
454
n
436
TYR
454
A
PHE
455
n
437
PHE
455
A
PRO
456
n
438
PRO
456
A
SER
457
n
439
SER
457
A
TYR
458
n
440
TYR
458
A
SER
459
n
441
SER
459
A
LEU
460
n
442
LEU
460
A
MET
461
n
443
MET
461
A
ASP
462
n
444
ASP
462
A
ARG
463
n
445
ARG
463
A
VAL
464
n
446
VAL
464
A
GLU
465
n
447
GLU
465
A
ASN
466
n
448
ASN
466
A
ARG
467
n
449
ARG
467
A
VAL
468
n
450
VAL
468
A
SER
469
n
451
SER
469
A
PHE
470
n
452
PHE
470
A
GLU
471
n
453
GLU
471
A
HIS
472
n
454
HIS
472
A
MET
473
n
455
MET
473
A
LYS
474
n
456
LYS
474
A
GLU
475
n
457
GLU
475
A
TYR
476
n
458
TYR
476
A
ARG
477
n
459
ARG
477
A
GLY
478
n
460
GLY
478
A
ILE
479
n
461
ILE
479
A
ASP
480
n
462
ASP
480
A
GLN
481
n
463
GLN
481
A
LYS
482
n
464
LYS
482
A
GLU
483
n
465
GLU
483
A
LEU
484
n
466
LEU
484
A
TYR
485
n
467
TYR
485
A
SER
486
n
468
SER
486
A
MET
487
n
469
MET
487
A
LEU
488
n
470
LEU
488
A
LYS
489
n
471
LYS
489
A
LYS
490
n
472
LYS
490
A
PHE
491
n
473
PHE
491
A
ARG
492
n
474
ARG
492
A
ARG
493
n
475
ARG
493
A
ASP
494
n
476
ASP
494
A
HIS
495
n
477
HIS
495
A
GLY
496
n
478
GLY
496
A
THR
497
n
479
THR
497
A
ILE
498
n
480
ILE
498
A
PHE
499
n
481
PHE
499
A
ALA
500
n
482
ALA
500
A
VAL
501
n
483
VAL
501
A
SER
502
n
484
SER
502
A
GLY
503
n
485
GLY
503
A
GLY
504
n
486
GLY
504
A
ARG
505
n
487
ARG
505
A
LEU
506
n
488
LEU
506
A
SER
507
n
489
SER
507
A
GLU
508
n
490
GLU
508
A
GLY
509
n
491
GLY
509
A
n
492
510
A
n
493
511
A
n
494
512
A
n
495
513
A
n
496
514
A
ASN
515
n
497
ASN
515
A
GLU
516
n
498
GLU
516
A
LEU
517
n
499
LEU
517
A
GLU
518
n
500
GLU
518
A
MET
519
n
501
MET
519
A
ILE
520
n
502
ILE
520
A
ILE
521
n
503
ILE
521
A
LEU
522
n
504
LEU
522
A
ALA
523
n
505
ALA
523
A
GLY
524
n
506
GLY
524
A
LEU
525
n
507
LEU
525
A
PRO
526
n
508
PRO
526
A
PHE
527
n
509
PHE
527
A
PRO
528
n
510
PRO
528
A
ARG
529
n
511
ARG
529
A
PRO
530
n
512
PRO
530
A
ASP
531
n
513
ASP
531
A
ALA
532
n
514
ALA
532
A
ILE
533
n
515
ILE
533
A
ASN
534
n
516
ASN
534
A
ARG
535
n
517
ARG
535
A
SER
536
n
518
SER
536
A
LEU
537
n
519
LEU
537
A
PHE
538
n
520
PHE
538
A
ASP
539
n
521
ASP
539
A
TYR
540
n
522
TYR
540
A
TYR
541
n
523
TYR
541
A
GLU
542
n
524
GLU
542
A
ARG
543
n
525
ARG
543
A
LYS
544
n
526
LYS
544
A
TYR
545
n
527
TYR
545
A
GLY
546
n
528
GLY
546
A
LYS
547
n
529
LYS
547
A
GLY
548
n
530
GLY
548
A
TRP
549
n
531
TRP
549
A
GLU
550
n
532
GLU
550
A
TYR
551
n
533
TYR
551
A
SER
552
n
534
SER
552
A
VAL
553
n
535
VAL
553
A
VAL
554
n
536
VAL
554
A
TYR
555
n
537
TYR
555
A
PRO
556
n
538
PRO
556
A
THR
557
n
539
THR
557
A
ALA
558
n
540
ALA
558
A
ILE
559
n
541
ILE
559
A
LYS
560
n
542
LYS
560
A
ILE
561
n
543
ILE
561
A
ARG
562
n
544
ARG
562
A
GLN
563
n
545
GLN
563
A
GLU
564
n
546
GLU
564
A
ILE
565
n
547
ILE
565
A
GLY
566
n
548
GLY
566
A
ARG
567
n
549
ARG
567
A
LEU
568
n
550
LEU
568
A
ILE
569
n
551
ILE
569
A
ARG
570
n
552
ARG
570
A
SER
571
n
553
SER
571
A
ALA
572
n
554
ALA
572
A
GLU
573
n
555
GLU
573
A
ASP
574
n
556
ASP
574
A
THR
575
n
557
THR
575
A
GLY
576
n
558
GLY
576
A
ALA
577
n
559
ALA
577
A
CYS
578
n
560
CYS
578
A
VAL
579
n
561
VAL
579
A
ILE
580
n
562
ILE
580
A
LEU
581
n
563
LEU
581
A
ASP
582
n
564
ASP
582
A
LYS
583
n
565
LYS
583
A
ARG
584
n
566
ARG
584
A
ALA
585
n
567
ALA
585
A
GLY
586
n
568
GLY
586
A
GLN
587
n
569
GLN
587
A
PHE
588
n
570
PHE
588
A
ARG
589
n
571
ARG
589
A
LYS
590
n
572
LYS
590
A
PHE
591
n
573
PHE
591
A
ILE
592
n
574
ILE
592
A
PRO
593
n
575
PRO
593
A
ASP
594
n
576
ASP
594
A
MET
595
n
577
MET
595
A
LYS
596
n
578
LYS
596
A
LYS
597
n
579
LYS
597
A
THR
598
n
580
THR
598
A
SER
599
n
581
SER
599
A
ASP
600
n
582
ASP
600
A
PRO
601
n
583
PRO
601
A
ALA
602
n
584
ALA
602
A
SER
603
n
585
SER
603
A
ASP
604
n
586
ASP
604
A
ILE
605
n
587
ILE
605
A
TYR
606
n
588
TYR
606
A
ASN
607
n
589
ASN
607
A
PHE
608
n
590
PHE
608
A
PHE
609
n
591
PHE
609
A
ILE
610
n
592
ILE
610
A
SER
611
n
593
SER
611
A
ALA
612
n
594
ALA
612
A
GLN
613
n
595
GLN
613
A
ALA
614
n
596
ALA
614
A
ARG
615
n
597
ARG
615
A
n
598
616
A
n
599
617
A
n
600
618
A
n
601
619
A
n
602
620
A
4.0650
-0.0917
-0.2999
10.1864
-3.6955
4.7998
-0.0366
0.6067
0.0755
-1.5207
0.4352
1.6355
0.6680
-0.6454
-0.3985
-0.0085
-0.2876
-0.2840
0.0261
0.0985
0.1749
refined
-44.7358
34.1328
12.3891
X-RAY DIFFRACTION
2.3095
1.7334
-1.1087
7.3572
-1.9183
8.0934
0.1921
0.0441
0.3662
-0.2068
0.2556
0.7117
-0.1386
-0.2338
-0.4477
-0.2112
0.0160
0.0614
-0.2052
0.0859
-0.0837
refined
-35.6184
57.1209
13.1739
X-RAY DIFFRACTION
2.6264
-1.5218
0.9895
8.7906
1.2986
2.2422
-0.0650
-0.3632
-0.0643
0.3674
0.2718
-0.2469
0.2387
0.1581
-0.2068
-0.3212
-0.0886
0.0778
0.0944
-0.0536
-0.2142
refined
-26.3235
42.0060
42.0677
X-RAY DIFFRACTION
5.4153
-0.5369
-3.2251
0.9735
2.7011
8.0828
-0.1235
0.3299
0.1845
-0.0808
0.2391
-0.2384
-0.5418
0.5905
-0.1156
0.3091
-0.1450
-0.0594
-0.0002
0.0042
0.1553
refined
-22.1039
17.9094
9.1766
X-RAY DIFFRACTION
A
23
A
79
X-RAY DIFFRACTION
1
A
176
A
224
X-RAY DIFFRACTION
1
A
363
A
405
X-RAY DIFFRACTION
1
A
80
A
175
X-RAY DIFFRACTION
2
A
1616
A
1616
X-RAY DIFFRACTION
2
A
225
A
362
X-RAY DIFFRACTION
3
A
406
A
615
X-RAY DIFFRACTION
4
software_defined_assembly
PQS
1
monomeric
A
CYS
92
A
SG
CYS
74
1_555
A
SF4
1616
B
FE1
SF4
1_555
A
SF4
1616
B
S2
SF4
1_555
99.2
A
CYS
92
A
SG
CYS
74
1_555
A
SF4
1616
B
FE1
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
115.9
A
SF4
1616
B
S2
SF4
1_555
A
SF4
1616
B
FE1
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
104.0
A
CYS
92
A
SG
CYS
74
1_555
A
SF4
1616
B
FE1
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
123.3
A
SF4
1616
B
S2
SF4
1_555
A
SF4
1616
B
FE1
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
105.6
A
SF4
1616
B
S3
SF4
1_555
A
SF4
1616
B
FE1
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
106.2
A
CYS
164
A
SG
CYS
146
1_555
A
SF4
1616
B
FE4
SF4
1_555
A
SF4
1616
B
S1
SF4
1_555
104.2
A
CYS
164
A
SG
CYS
146
1_555
A
SF4
1616
B
FE4
SF4
1_555
A
SF4
1616
B
S2
SF4
1_555
107.8
A
SF4
1616
B
S1
SF4
1_555
A
SF4
1616
B
FE4
SF4
1_555
A
SF4
1616
B
S2
SF4
1_555
106.7
A
CYS
164
A
SG
CYS
146
1_555
A
SF4
1616
B
FE4
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
126.6
A
SF4
1616
B
S1
SF4
1_555
A
SF4
1616
B
FE4
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
106.8
A
SF4
1616
B
S2
SF4
1_555
A
SF4
1616
B
FE4
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
103.5
A
CYS
113
A
SG
CYS
95
1_555
A
SF4
1616
B
FE3
SF4
1_555
A
SF4
1616
B
S1
SF4
1_555
126.9
A
CYS
113
A
SG
CYS
95
1_555
A
SF4
1616
B
FE3
SF4
1_555
A
SF4
1616
B
S2
SF4
1_555
109.3
A
SF4
1616
B
S1
SF4
1_555
A
SF4
1616
B
FE3
SF4
1_555
A
SF4
1616
B
S2
SF4
1_555
106.5
A
CYS
113
A
SG
CYS
95
1_555
A
SF4
1616
B
FE3
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
100.9
A
SF4
1616
B
S1
SF4
1_555
A
SF4
1616
B
FE3
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
105.7
A
SF4
1616
B
S2
SF4
1_555
A
SF4
1616
B
FE3
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
105.6
A
CYS
128
A
SG
CYS
110
1_555
A
SF4
1616
B
FE2
SF4
1_555
A
SF4
1616
B
S1
SF4
1_555
107.4
A
CYS
128
A
SG
CYS
110
1_555
A
SF4
1616
B
FE2
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
110.3
A
SF4
1616
B
S1
SF4
1_555
A
SF4
1616
B
FE2
SF4
1_555
A
SF4
1616
B
S3
SF4
1_555
106.2
A
CYS
128
A
SG
CYS
110
1_555
A
SF4
1616
B
FE2
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
120.7
A
SF4
1616
B
S1
SF4
1_555
A
SF4
1616
B
FE2
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
105.8
A
SF4
1616
B
S3
SF4
1_555
A
SF4
1616
B
FE2
SF4
1_555
A
SF4
1616
B
S4
SF4
1_555
105.5
A
GLU
315
A
OE2
GLU
297
1_555
A
CA
1617
C
CA
CA
1_555
A
GLU
312
A
OE1
GLU
294
1_555
59.9
A
GLU
315
A
OE2
GLU
297
1_555
A
CA
1617
C
CA
CA
1_555
A
GLU
312
A
OE2
GLU
294
1_555
101.4
A
GLU
312
A
OE1
GLU
294
1_555
A
CA
1617
C
CA
CA
1_555
A
GLU
312
A
OE2
GLU
294
1_555
44.5
A
GLU
315
A
OE2
GLU
297
1_555
A
CA
1617
C
CA
CA
1_555
A
ASN
162
A
ND2
ASN
144
5_455
87.4
A
GLU
312
A
OE1
GLU
294
1_555
A
CA
1617
C
CA
CA
1_555
A
ASN
162
A
ND2
ASN
144
5_455
83.7
A
GLU
312
A
OE2
GLU
294
1_555
A
CA
1617
C
CA
CA
1_555
A
ASN
162
A
ND2
ASN
144
5_455
68.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
83
A
N
ILE
65
A
O
ILE
178
A
O
ILE
160
A
N
VAL
179
A
N
VAL
161
A
O
VAL
54
A
O
VAL
36
A
N
LEU
55
A
N
LEU
37
A
O
VAL
207
A
O
VAL
189
A
N
ILE
208
A
N
ILE
190
A
O
LYS
377
A
O
LYS
359
A
N
HIS
380
A
N
HIS
362
A
O
VAL
25
A
O
VAL
7
A
O
ALA
26
A
O
ALA
8
A
N
LYS
402
A
N
LYS
384
A
N
ILE
228
A
N
ILE
210
A
O
MET
359
A
O
MET
341
A
N
ALA
362
A
N
ALA
344
A
O
ALA
348
A
O
ALA
330
A
N
LEU
351
A
N
LEU
333
A
O
VAL
278
A
O
VAL
260
A
N
ILE
498
A
N
ILE
480
A
O
THR
451
A
O
THR
433
A
N
ILE
452
A
N
ILE
434
A
O
MET
519
A
O
MET
501
A
N
ILE
520
A
N
ILE
502
A
O
ALA
577
A
O
ALA
559
A
N
CYS
578
A
N
CYS
560
A
O
TYR
414
A
O
TYR
396
A
N
TYR
417
A
N
TYR
399
A
O
LYS
596
A
O
LYS
578
1
A
MET
19
A
MET
1
1
Y
1
A
GLN
20
A
GLN
2
1
Y
1
A
LYS
21
A
LYS
3
1
Y
1
A
SER
22
A
SER
4
1
Y
1
A
ILE
510
A
ILE
492
1
Y
1
A
ASN
511
A
ASN
493
1
Y
1
A
PHE
512
A
PHE
494
1
Y
1
A
PRO
513
A
PRO
495
1
Y
1
A
GLY
514
A
GLY
496
1
Y
1
A
GLU
616
A
GLU
598
1
Y
1
A
LYS
617
A
LYS
599
1
Y
1
A
TYR
618
A
TYR
600
1
Y
1
A
GLY
619
A
GLY
601
1
Y
1
A
ALA
620
A
ALA
602
1
Y
1
A
SER
33
39.32
77.28
1
A
ALA
43
-142.17
22.41
1
A
TYR
46
61.78
-86.04
1
A
SER
47
41.46
-77.60
1
A
LYS
51
64.85
-15.72
1
A
ARG
59
-81.75
-72.56
1
A
GLU
212
38.91
50.88
1
A
ASP
341
-68.79
-102.04
1
A
GLN
342
-75.57
-166.68
1
A
ASP
343
100.99
-4.57
1
A
SER
382
-153.68
-67.96
1
A
THR
384
-155.10
84.92
1
A
LEU
385
-156.41
47.17
1
A
ASP
386
-33.34
-80.03
1
A
LYS
403
-102.18
53.53
1
A
ASP
429
68.71
97.31
1
A
ASN
450
-56.73
89.12
1
A
SER
469
-142.10
49.86
1
A
HIS
472
-123.80
-168.84
1
A
GLU
475
-152.95
66.71
1
A
ARG
477
-47.35
155.61
1
A
ILE
479
66.82
-76.37
1
A
ASP
480
34.47
125.27
1
A
HIS
495
58.08
-132.19
1
A
GLU
508
-94.85
47.69
1
A
GLU
518
-164.33
-45.45
1
A
PRO
530
-55.37
41.14
1
A
LYS
547
-149.02
57.20
1
A
VAL
553
-122.40
-58.21
1
A
ARG
562
-36.25
-36.34
1
A
ALA
614
-29.61
-51.59
54.04
-0.15000
-0.08000
0.00000
-0.15000
0.00000
0.23000
0.948
0.895
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.287
0.206
0.209
2.90
20.00
657
12870
4.900
100.0
49.724
0.427
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
MAD
0.515
0.80
0.80
1.40
NONE
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.90
20.00
1
4761
9
0
4751
0.007
0.022
4857
0.001
0.020
3452
0.925
1.976
6540
0.780
3.000
8354
6.004
5.000
586
32.813
23.432
236
17.612
15.000
899
13.261
15.000
42
0.055
0.200
699
0.002
0.020
5356
0.001
0.020
1032
0.201
0.200
1229
0.168
0.200
3652
0.182
0.200
2381
0.081
0.200
2692
0.117
0.200
115
0.135
0.200
21
0.137
0.200
49
0.118
0.200
6
0.791
2.000
3061
1.470
4.000
4727
1.903
5.000
2086
2.979
8.000
1801
0.3190
0.3190
2.97
64
895
20
2.90
63.63
2VSF
13622
0.0
0.07
1
8.89
3.98
100.0
0.62
2.90
3.06
1.24
1
3.56
100.0
refinement
REFMAC
5.2.0019
data reduction
MOSFLM
data scaling
SCALA
phasing
SHARP
DNA REPAIR HELICASE RAD3 RELATED PROTEIN
Structure of XPD from Thermoplasma acidophilum
1
N
N
2
N
N
3
N
N
4
N
N
A
THR
36
A
THR
18
HELX_P
A
SER
42
A
SER
24
1
1
7
A
THR
60
A
THR
42
HELX_P
A
SER
76
A
SER
58
1
2
17
A
GLY
87
A
GLY
69
HELX_P
A
CYS
92
A
CYS
74
1
3
6
A
LEU
94
A
LEU
76
HELX_P
A
ASP
99
A
ASP
81
1
4
6
A
ASN
105
A
ASN
87
HELX_P
A
GLY
123
A
GLY
105
1
5
19
A
ASN
124
A
ASN
106
HELX_P
A
CYS
128
A
CYS
110
5
6
5
A
ASN
132
A
ASN
114
HELX_P
A
ARG
136
A
ARG
118
5
7
5
A
SER
137
A
SER
119
HELX_P
A
GLU
147
A
GLU
129
1
8
11
A
THR
150
A
THR
132
HELX_P
A
ASN
162
A
ASN
144
1
9
13
A
CYS
164
A
CYS
146
HELX_P
A
LEU
173
A
LEU
155
1
10
10
A
PRO
174
A
PRO
156
HELX_P
A
ALA
176
A
ALA
158
5
11
3
A
TYR
183
A
TYR
165
HELX_P
A
LEU
187
A
LEU
169
1
12
5
A
ASN
188
A
ASN
170
HELX_P
A
GLY
200
A
GLY
182
1
13
13
A
GLU
212
A
GLU
194
HELX_P
A
HIS
214
A
HIS
196
5
14
3
A
ASN
215
A
ASN
197
HELX_P
A
SER
225
A
SER
207
1
15
11
A
VAL
230
A
VAL
212
HELX_P
A
TYR
243
A
TYR
225
1
16
14
A
HIS
253
A
HIS
235
HELX_P
A
CYS
273
A
CYS
255
1
17
21
A
ARG
281
A
ARG
263
HELX_P
A
LYS
294
A
LYS
276
1
18
14
A
SER
296
A
SER
278
HELX_P
A
GLY
322
A
GLY
304
1
19
27
A
SER
327
A
SER
309
HELX_P
A
ASP
341
A
ASP
323
1
20
15
A
PRO
366
A
PRO
348
HELX_P
A
GLU
371
A
GLU
353
1
21
6
A
VAL
372
A
VAL
354
HELX_P
A
SER
376
A
SER
358
5
22
5
A
PRO
387
A
PRO
369
HELX_P
A
GLY
396
A
GLY
378
1
23
10
A
PRO
409
A
PRO
391
HELX_P
A
GLU
411
A
GLU
393
5
24
3
A
ASP
429
A
ASP
411
HELX_P
A
LYS
448
A
LYS
430
1
25
20
A
SER
457
A
SER
439
HELX_P
A
VAL
468
A
VAL
450
1
26
12
A
ASP
480
A
ASP
462
HELX_P
A
ASP
494
A
ASP
476
1
27
15
A
GLY
504
A
GLY
486
HELX_P
A
GLU
508
A
GLU
490
5
28
5
A
ASP
531
A
ASP
513
HELX_P
A
LYS
544
A
LYS
526
1
29
14
A
LYS
547
A
LYS
529
HELX_P
A
VAL
553
A
VAL
535
1
30
7
A
VAL
553
A
VAL
535
HELX_P
A
ILE
569
A
ILE
551
1
31
17
A
ALA
585
A
ALA
567
HELX_P
A
LYS
590
A
LYS
572
5
32
6
A
ASP
600
A
ASP
582
HELX_P
A
ARG
615
A
ARG
597
1
33
16
metalc
2.364
A
SF4
1616
B
FE1
SF4
1_555
A
CYS
92
A
SG
CYS
74
1_555
metalc
2.250
A
SF4
1616
B
FE4
SF4
1_555
A
CYS
164
A
SG
CYS
146
1_555
metalc
2.341
A
SF4
1616
B
FE3
SF4
1_555
A
CYS
113
A
SG
CYS
95
1_555
metalc
2.481
A
SF4
1616
B
FE2
SF4
1_555
A
CYS
128
A
SG
CYS
110
1_555
metalc
2.600
A
CA
1617
C
CA
CA
1_555
A
GLU
315
A
OE2
GLU
297
1_555
metalc
2.432
A
CA
1617
C
CA
CA
1_555
A
GLU
312
A
OE1
GLU
294
1_555
metalc
3.123
A
CA
1617
C
CA
CA
1_555
A
GLU
312
A
OE2
GLU
294
1_555
metalc
2.233
A
CA
1617
C
CA
CA
1_555
A
ASN
162
A
ND2
ASN
144
5_455
HYDROLASE
NER, TFIIH, HELICASE, HYDROLASE, ATP-BINDING, NUCLEOTIDE-BINDING, IRON SULFUR CLUSTER
Q9HM14_THEAC
UNP
1
Q9HM14
1
602
2VSF
19
620
Q9HM14
A
1
1
602
7
4
6
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
ALA
82
A
ALA
64
A
PRO
84
A
PRO
66
A
ILE
178
A
ILE
160
A
PRO
182
A
PRO
164
A
LYS
53
A
LYS
35
A
VAL
58
A
VAL
40
A
ILE
206
A
ILE
188
A
LEU
210
A
LEU
192
A
LYS
377
A
LYS
359
A
MET
381
A
MET
363
A
GLY
24
A
GLY
6
A
LEU
27
A
LEU
9
A
PHE
401
A
PHE
383
A
LYS
402
A
LYS
384
A
PHE
226
A
PHE
208
A
SER
229
A
SER
211
A
TYR
358
A
TYR
340
A
CYS
363
A
CYS
345
A
TYR
347
A
TYR
329
A
SER
352
A
SER
334
A
VAL
278
A
VAL
260
A
ILE
280
A
ILE
262
A
ILE
498
A
ILE
480
A
VAL
501
A
VAL
483
A
THR
451
A
THR
433
A
PHE
455
A
PHE
437
A
MET
519
A
MET
501
A
LEU
522
A
LEU
504
A
GLY
576
A
GLY
558
A
LEU
581
A
LEU
563
A
ARG
413
A
ARG
395
A
TYR
418
A
TYR
400
A
LYS
596
A
LYS
578
A
THR
598
A
THR
580
BINDING SITE FOR RESIDUE SF4 A1616
Software
7
BINDING SITE FOR RESIDUE CA A1617
Software
6
A
ARG
88
A
ARG
70
7
1_555
A
CYS
92
A
CYS
74
7
1_555
A
ILE
93
A
ILE
75
7
1_555
A
LEU
94
A
LEU
76
7
1_555
A
CYS
113
A
CYS
95
7
1_555
A
CYS
128
A
CYS
110
7
1_555
A
CYS
164
A
CYS
146
7
1_555
A
GLU
107
A
GLU
89
6
1_555
A
LYS
111
A
LYS
93
6
1_555
A
GLU
159
A
GLU
141
6
1_555
A
ASN
162
A
ASN
144
6
1_555
A
GLU
312
A
GLU
294
6
1_555
A
GLU
315
A
GLU
297
6
1_555
170
P 65