0.010634
0.000000
0.002490
0.000000
0.016194
0.000000
0.000000
0.000000
0.008596
0.00000
0.00000
0.00000
Itoh, T.
Fairall, L.
Schwabe, J.W.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
103.18
90.00
94.040
61.750
119.480
C22 H32 O3
344.488
(6E,10Z,13Z,16Z,19Z)-4-oxodocosa-6,10,13,16,19-pentaenoic acid
4-OXODOCOSAHEXAENOIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
N
8
N
C
N
9
N
C
N
10
N
C
N
11
N
C
N
12
N
C
N
13
N
C
N
14
N
C
N
15
N
C
N
16
N
C
N
17
N
C
N
18
N
C
N
19
N
C
N
20
N
O
N
21
N
C
N
22
N
C
N
23
N
C
N
24
N
O
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
C
N
78
N
N
N
79
N
C
N
80
N
N
N
81
N
N
N
82
N
O
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
O
N
105
N
N
N
106
N
O
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
R
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
S
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
N
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
Y
199
N
C
Y
200
N
N
Y
201
N
C
Y
202
N
C
Y
203
N
N
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
S
C
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
N
N
263
S
C
N
264
N
C
N
265
N
O
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
N
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
S
N
294
N
C
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
N
335
N
C
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
N
352
N
O
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
R
C
N
366
N
O
N
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
N
407
N
C
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
doub
N
7
N
sing
N
8
Z
sing
N
9
N
doub
N
10
N
sing
N
11
N
sing
N
12
N
doub
N
13
N
sing
N
14
N
sing
N
15
Z
sing
N
16
N
doub
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
Z
sing
N
23
N
doub
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
Z
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
E
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
Y
196
N
sing
Y
197
N
doub
Y
198
N
doub
N
199
N
sing
Y
200
N
sing
N
201
N
sing
Y
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
US
Nat.Struct.Mol.Biol.
1545-9993
15
924
10.1038/NSMB.1474
19172745
Structural Basis for the Activation of Ppargamma by Oxidized Fatty Acids.
2008
10.2210/pdb2vv3/pdb
pdb_00002vv3
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2007-11-16
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.93
1.0
ID14-3
ESRF
0.93
SYNCHROTRON
ESRF BEAMLINE ID14-3
4-OXODHA
31449.520
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
LIGAND BINDING DOMAIN, RESIDUES 202-475
2
man
polymer
344.488
(6E,10Z,13Z,16Z,19Z)-4-oxodocosa-6,10,13,16,19-pentaenoic acid
1
syn
non-polymer
18.015
water
80
nat
water
PPAR GAMMA, NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3
no
no
GALNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRI
FQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFG
DFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTD
LRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
GALNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRI
FQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFG
DFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTD
LRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
511693
ESCHERICHIA COLI
BL21
ROSETTA
PET30A MODIFIED
1
2.8
55.5
NONE
VAPOR DIFFUSION
8
TRIS 100MM PH 8, 0.7M NA-CITRATE, 1MM TCEP, 0.5MM EDTA, VAPOUR DIFFUSION, DARK, UNDER NITROGEN, 22 DEGREES CELSIUS
295
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
struct_conn
exptl_crystal_grow
struct_biol
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Source and taxonomy
Version format compliance
Data collection
Derived calculations
Experimental preparation
Other
Data collection
Experimental preparation
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2008-08-19
1
1
2012-06-06
1
2
2019-03-06
1
3
2019-05-08
1
4
2023-12-13
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
_struct_conn.pdbx_leaving_atom_flag
_exptl_crystal_grow.temp
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
A NOVEL ANTI-ADIPOGENIC PARTIAL AGONIST OF PEROXISOMEPROLIFERATOR-ACTIVATED RECEPTOR-GAMMA ( PPARG) RECRUITSPPARG-COACTIVATOR-1 ALPHA ( PGC1A) BUT POTENTIATES INSULINSIGNALING IN VITRO
THE 2.1 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THEHETERODIMER OF THE HUMAN RXRALPHA AND PPARGAMMA LIGANDBINDING DOMAINS RESPECTIVELY BOUND WITH 9-CIS RETINOIC ACIDAND GI262570 AND CO-ACTIVATOR PEPTIDES.
LIGAND-BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA
LIGAND BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATORACTIVATED RECEPTOR GAMMA IN COMPLEX WITH A SYNTHETICAGONIST
CRYSTAL STRUCTURE OF A NEW REXINOID BOUND TO THE RXRALPHALIGAND BINDING DOAMIN IN THE RXRALPHA/PPARGAMMA HETERODIMER
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF HUMANPPAR-GAMMA IN COMPLEX WITH THE AGONIST AZ 242
LIGAND BINDING DOMAIN OF HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR
THE 2.3 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THEHETERODIMER OF THE HUMAN PPARGAMMA AND RXRALPHA LIGANDBINDING DOMAINS RESPECTIVELY BOUND WITH GW409544 AND 9- CISRETINOIC ACID AND CO-ACTIVATOR PEPTIDES.
THE 2.1 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THEHETERODIMER OF THE HUMAN RXRALPHA AND PPARGAMMA LIGANDBINDING DOMAINS RESPECTIVELY BOUND WITH 9-CIS RETINOIC ACIDAND ROSIGLITAZONE AND CO-ACTIVATOR PEPTIDES.
STRUCTURAL AND BIOCHEMICAL BASIS FOR SELECTIVE REPRESSIONOF THE ORPHAN NUCLEAR RECEPTOR LRH -1 BY SHP
LIGAND BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF HUMANPPAR-GAMMA IN COMPLEX WITH AN AGONIST
HPPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH 13-(S)-HODE
STRUCTURE-BASED DRUG DESIGN OF A NOVEL FAMILY OF PPARPARTIAL AGONISTS: VIRTUAL SCREENING, X-RAY CRYSTALLOGRAPHYAND IN VITRO/ IN VIVO BIOLOGICAL ACTIVITIES
HPPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH 9-(S)-HODE
PPARGAMMA IN COMPLEX WITH A 2-BABA COMPOUND
0072 PARTIAL AGONIST PPAR GAMMA COCRYSTAL
STRUCTURE-BASED DRUG DESIGN OF A NOVEL FAMILY OF PPARPARTIAL AGONISTS: VIRTUAL SCREENING, X-RAY CRYSTALLOGRAPHYAND IN VITRO/ IN VIVO BIOLOGICAL ACTIVITIES
LIGAND BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATORACTIVATED RECEPTOR GAMMA IN COMPLEX WITH AN AGONIST
HPPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH DHA
HPPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH 4-HDHA
HPPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH 5-HEPA
HPPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH 6-OXOOTE
PDBE
Y
PDBE
2008-06-02
REL
REL
4R8
(6E,10Z,13Z,16Z,19Z)-4-oxodocosa-6,10,13,16,19-pentaenoic acid
HOH
water
4-OXODOCOSAHEXAENOIC ACID (4R8): LIGAND IS COVALENTLY
COUPLED AT THE C8 POSITION TO CYS285 IN MONOMER A
RESIDUE NUMBERING CORRESPONDS TO ISOFORM 1
2I4P
PDB ENTRY 2I4P
PDB
experimental model
4R8
1476
2
4R8
4R8
1476
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2001
3
HOH
HOH
2001
B
HOH
2002
3
HOH
HOH
2002
B
HOH
2003
3
HOH
HOH
2003
B
HOH
2004
3
HOH
HOH
2004
B
HOH
2005
3
HOH
HOH
2005
B
HOH
2006
3
HOH
HOH
2006
B
HOH
2007
3
HOH
HOH
2007
B
HOH
2008
3
HOH
HOH
2008
B
HOH
2009
3
HOH
HOH
2009
B
HOH
2010
3
HOH
HOH
2010
B
HOH
2011
3
HOH
HOH
2011
B
HOH
2012
3
HOH
HOH
2012
B
HOH
2013
3
HOH
HOH
2013
B
HOH
2014
3
HOH
HOH
2014
B
HOH
2015
3
HOH
HOH
2015
B
HOH
2016
3
HOH
HOH
2016
B
HOH
2017
3
HOH
HOH
2017
B
HOH
2018
3
HOH
HOH
2018
B
HOH
2019
3
HOH
HOH
2019
B
HOH
2020
3
HOH
HOH
2020
B
HOH
2021
3
HOH
HOH
2021
B
HOH
2022
3
HOH
HOH
2022
B
HOH
2023
3
HOH
HOH
2023
B
HOH
2024
3
HOH
HOH
2024
B
HOH
2025
3
HOH
HOH
2025
B
HOH
2026
3
HOH
HOH
2026
B
HOH
2027
3
HOH
HOH
2027
B
HOH
2028
3
HOH
HOH
2028
B
HOH
2029
3
HOH
HOH
2029
B
HOH
2030
3
HOH
HOH
2030
B
HOH
2031
3
HOH
HOH
2031
B
HOH
2032
3
HOH
HOH
2032
B
HOH
2033
3
HOH
HOH
2033
B
HOH
2034
3
HOH
HOH
2034
B
HOH
2035
3
HOH
HOH
2035
B
HOH
2036
3
HOH
HOH
2036
B
n
1
202
A
n
2
203
A
n
3
204
A
n
4
205
A
n
5
206
A
GLU
207
n
6
GLU
207
A
SER
208
n
7
SER
208
A
ALA
209
n
8
ALA
209
A
ASP
210
n
9
ASP
210
A
LEU
211
n
10
LEU
211
A
ARG
212
n
11
ARG
212
A
ALA
213
n
12
ALA
213
A
LEU
214
n
13
LEU
214
A
ALA
215
n
14
ALA
215
A
LYS
216
n
15
LYS
216
A
HIS
217
n
16
HIS
217
A
LEU
218
n
17
LEU
218
A
TYR
219
n
18
TYR
219
A
ASP
220
n
19
ASP
220
A
SER
221
n
20
SER
221
A
TYR
222
n
21
TYR
222
A
ILE
223
n
22
ILE
223
A
LYS
224
n
23
LYS
224
A
SER
225
n
24
SER
225
A
PHE
226
n
25
PHE
226
A
PRO
227
n
26
PRO
227
A
LEU
228
n
27
LEU
228
A
THR
229
n
28
THR
229
A
LYS
230
n
29
LYS
230
A
ALA
231
n
30
ALA
231
A
LYS
232
n
31
LYS
232
A
ALA
233
n
32
ALA
233
A
ARG
234
n
33
ARG
234
A
ALA
235
n
34
ALA
235
A
ILE
236
n
35
ILE
236
A
LEU
237
n
36
LEU
237
A
THR
238
n
37
THR
238
A
GLY
239
n
38
GLY
239
A
LYS
240
n
39
LYS
240
A
n
40
241
A
THR
242
n
41
THR
242
A
ASP
243
n
42
ASP
243
A
LYS
244
n
43
LYS
244
A
SER
245
n
44
SER
245
A
PRO
246
n
45
PRO
246
A
PHE
247
n
46
PHE
247
A
VAL
248
n
47
VAL
248
A
ILE
249
n
48
ILE
249
A
TYR
250
n
49
TYR
250
A
ASP
251
n
50
ASP
251
A
MET
252
n
51
MET
252
A
ASN
253
n
52
ASN
253
A
SER
254
n
53
SER
254
A
LEU
255
n
54
LEU
255
A
MET
256
n
55
MET
256
A
MET
257
n
56
MET
257
A
GLY
258
n
57
GLY
258
A
GLU
259
n
58
GLU
259
A
ASP
260
n
59
ASP
260
A
LYS
261
n
60
LYS
261
A
ILE
262
n
61
ILE
262
A
LYS
263
n
62
LYS
263
A
n
63
264
A
n
64
265
A
n
65
266
A
n
66
267
A
n
67
268
A
n
68
269
A
n
69
270
A
n
70
271
A
n
71
272
A
n
72
273
A
n
73
274
A
LYS
275
n
74
LYS
275
A
GLU
276
n
75
GLU
276
A
VAL
277
n
76
VAL
277
A
ALA
278
n
77
ALA
278
A
ILE
279
n
78
ILE
279
A
ARG
280
n
79
ARG
280
A
ILE
281
n
80
ILE
281
A
PHE
282
n
81
PHE
282
A
GLN
283
n
82
GLN
283
A
GLY
284
n
83
GLY
284
A
CYS
285
n
84
CYS
285
A
GLN
286
n
85
GLN
286
A
PHE
287
n
86
PHE
287
A
ARG
288
n
87
ARG
288
A
SER
289
n
88
SER
289
A
VAL
290
n
89
VAL
290
A
GLU
291
n
90
GLU
291
A
ALA
292
n
91
ALA
292
A
VAL
293
n
92
VAL
293
A
GLN
294
n
93
GLN
294
A
GLU
295
n
94
GLU
295
A
ILE
296
n
95
ILE
296
A
THR
297
n
96
THR
297
A
GLU
298
n
97
GLU
298
A
TYR
299
n
98
TYR
299
A
ALA
300
n
99
ALA
300
A
LYS
301
n
100
LYS
301
A
SER
302
n
101
SER
302
A
ILE
303
n
102
ILE
303
A
PRO
304
n
103
PRO
304
A
GLY
305
n
104
GLY
305
A
PHE
306
n
105
PHE
306
A
VAL
307
n
106
VAL
307
A
ASN
308
n
107
ASN
308
A
LEU
309
n
108
LEU
309
A
ASP
310
n
109
ASP
310
A
LEU
311
n
110
LEU
311
A
ASN
312
n
111
ASN
312
A
ASP
313
n
112
ASP
313
A
GLN
314
n
113
GLN
314
A
VAL
315
n
114
VAL
315
A
THR
316
n
115
THR
316
A
LEU
317
n
116
LEU
317
A
LEU
318
n
117
LEU
318
A
LYS
319
n
118
LYS
319
A
TYR
320
n
119
TYR
320
A
GLY
321
n
120
GLY
321
A
VAL
322
n
121
VAL
322
A
HIS
323
n
122
HIS
323
A
GLU
324
n
123
GLU
324
A
ILE
325
n
124
ILE
325
A
ILE
326
n
125
ILE
326
A
TYR
327
n
126
TYR
327
A
THR
328
n
127
THR
328
A
MET
329
n
128
MET
329
A
LEU
330
n
129
LEU
330
A
ALA
331
n
130
ALA
331
A
SER
332
n
131
SER
332
A
LEU
333
n
132
LEU
333
A
MET
334
n
133
MET
334
A
ASN
335
n
134
ASN
335
A
LYS
336
n
135
LYS
336
A
ASP
337
n
136
ASP
337
A
GLY
338
n
137
GLY
338
A
VAL
339
n
138
VAL
339
A
LEU
340
n
139
LEU
340
A
ILE
341
n
140
ILE
341
A
SER
342
n
141
SER
342
A
GLU
343
n
142
GLU
343
A
GLY
344
n
143
GLY
344
A
GLN
345
n
144
GLN
345
A
GLY
346
n
145
GLY
346
A
PHE
347
n
146
PHE
347
A
MET
348
n
147
MET
348
A
THR
349
n
148
THR
349
A
ARG
350
n
149
ARG
350
A
GLU
351
n
150
GLU
351
A
PHE
352
n
151
PHE
352
A
LEU
353
n
152
LEU
353
A
LYS
354
n
153
LYS
354
A
SER
355
n
154
SER
355
A
LEU
356
n
155
LEU
356
A
ARG
357
n
156
ARG
357
A
LYS
358
n
157
LYS
358
A
PRO
359
n
158
PRO
359
A
PHE
360
n
159
PHE
360
A
GLY
361
n
160
GLY
361
A
ASP
362
n
161
ASP
362
A
PHE
363
n
162
PHE
363
A
MET
364
n
163
MET
364
A
GLU
365
n
164
GLU
365
A
PRO
366
n
165
PRO
366
A
LYS
367
n
166
LYS
367
A
PHE
368
n
167
PHE
368
A
GLU
369
n
168
GLU
369
A
PHE
370
n
169
PHE
370
A
ALA
371
n
170
ALA
371
A
VAL
372
n
171
VAL
372
A
LYS
373
n
172
LYS
373
A
PHE
374
n
173
PHE
374
A
ASN
375
n
174
ASN
375
A
ALA
376
n
175
ALA
376
A
LEU
377
n
176
LEU
377
A
GLU
378
n
177
GLU
378
A
LEU
379
n
178
LEU
379
A
ASP
380
n
179
ASP
380
A
ASP
381
n
180
ASP
381
A
SER
382
n
181
SER
382
A
ASP
383
n
182
ASP
383
A
LEU
384
n
183
LEU
384
A
ALA
385
n
184
ALA
385
A
ILE
386
n
185
ILE
386
A
PHE
387
n
186
PHE
387
A
ILE
388
n
187
ILE
388
A
ALA
389
n
188
ALA
389
A
VAL
390
n
189
VAL
390
A
ILE
391
n
190
ILE
391
A
ILE
392
n
191
ILE
392
A
LEU
393
n
192
LEU
393
A
SER
394
n
193
SER
394
A
GLY
395
n
194
GLY
395
A
ASP
396
n
195
ASP
396
A
ARG
397
n
196
ARG
397
A
PRO
398
n
197
PRO
398
A
GLY
399
n
198
GLY
399
A
LEU
400
n
199
LEU
400
A
LEU
401
n
200
LEU
401
A
ASN
402
n
201
ASN
402
A
VAL
403
n
202
VAL
403
A
LYS
404
n
203
LYS
404
A
PRO
405
n
204
PRO
405
A
ILE
406
n
205
ILE
406
A
GLU
407
n
206
GLU
407
A
ASP
408
n
207
ASP
408
A
ILE
409
n
208
ILE
409
A
GLN
410
n
209
GLN
410
A
ASP
411
n
210
ASP
411
A
ASN
412
n
211
ASN
412
A
LEU
413
n
212
LEU
413
A
LEU
414
n
213
LEU
414
A
GLN
415
n
214
GLN
415
A
ALA
416
n
215
ALA
416
A
LEU
417
n
216
LEU
417
A
GLU
418
n
217
GLU
418
A
LEU
419
n
218
LEU
419
A
GLN
420
n
219
GLN
420
A
LEU
421
n
220
LEU
421
A
LYS
422
n
221
LYS
422
A
LEU
423
n
222
LEU
423
A
ASN
424
n
223
ASN
424
A
HIS
425
n
224
HIS
425
A
PRO
426
n
225
PRO
426
A
GLU
427
n
226
GLU
427
A
SER
428
n
227
SER
428
A
SER
429
n
228
SER
429
A
GLN
430
n
229
GLN
430
A
LEU
431
n
230
LEU
431
A
PHE
432
n
231
PHE
432
A
ALA
433
n
232
ALA
433
A
LYS
434
n
233
LYS
434
A
LEU
435
n
234
LEU
435
A
LEU
436
n
235
LEU
436
A
GLN
437
n
236
GLN
437
A
LYS
438
n
237
LYS
438
A
MET
439
n
238
MET
439
A
THR
440
n
239
THR
440
A
ASP
441
n
240
ASP
441
A
LEU
442
n
241
LEU
442
A
ARG
443
n
242
ARG
443
A
GLN
444
n
243
GLN
444
A
ILE
445
n
244
ILE
445
A
VAL
446
n
245
VAL
446
A
THR
447
n
246
THR
447
A
GLU
448
n
247
GLU
448
A
HIS
449
n
248
HIS
449
A
VAL
450
n
249
VAL
450
A
GLN
451
n
250
GLN
451
A
LEU
452
n
251
LEU
452
A
LEU
453
n
252
LEU
453
A
GLN
454
n
253
GLN
454
A
VAL
455
n
254
VAL
455
A
ILE
456
n
255
ILE
456
A
LYS
457
n
256
LYS
457
A
LYS
458
n
257
LYS
458
A
THR
459
n
258
THR
459
A
GLU
460
n
259
GLU
460
A
THR
461
n
260
THR
461
A
ASP
462
n
261
ASP
462
A
MET
463
n
262
MET
463
A
SER
464
n
263
SER
464
A
LEU
465
n
264
LEU
465
A
HIS
466
n
265
HIS
466
A
PRO
467
n
266
PRO
467
A
LEU
468
n
267
LEU
468
A
LEU
469
n
268
LEU
469
A
GLN
470
n
269
GLN
470
A
GLU
471
n
270
GLU
471
A
ILE
472
n
271
ILE
472
A
TYR
473
n
272
TYR
473
A
LYS
474
n
273
LYS
474
A
ASP
475
n
274
ASP
475
A
n
275
476
A
n
276
477
A
n
1
202
B
n
2
203
B
n
3
204
B
n
4
205
B
n
5
206
B
GLU
207
n
6
GLU
207
B
SER
208
n
7
SER
208
B
ALA
209
n
8
ALA
209
B
ASP
210
n
9
ASP
210
B
LEU
211
n
10
LEU
211
B
ARG
212
n
11
ARG
212
B
ALA
213
n
12
ALA
213
B
LEU
214
n
13
LEU
214
B
ALA
215
n
14
ALA
215
B
LYS
216
n
15
LYS
216
B
HIS
217
n
16
HIS
217
B
LEU
218
n
17
LEU
218
B
TYR
219
n
18
TYR
219
B
ASP
220
n
19
ASP
220
B
SER
221
n
20
SER
221
B
TYR
222
n
21
TYR
222
B
ILE
223
n
22
ILE
223
B
LYS
224
n
23
LYS
224
B
SER
225
n
24
SER
225
B
PHE
226
n
25
PHE
226
B
PRO
227
n
26
PRO
227
B
LEU
228
n
27
LEU
228
B
THR
229
n
28
THR
229
B
LYS
230
n
29
LYS
230
B
ALA
231
n
30
ALA
231
B
LYS
232
n
31
LYS
232
B
ALA
233
n
32
ALA
233
B
ARG
234
n
33
ARG
234
B
ALA
235
n
34
ALA
235
B
ILE
236
n
35
ILE
236
B
LEU
237
n
36
LEU
237
B
THR
238
n
37
THR
238
B
GLY
239
n
38
GLY
239
B
LYS
240
n
39
LYS
240
B
n
40
241
B
n
41
242
B
ASP
243
n
42
ASP
243
B
LYS
244
n
43
LYS
244
B
SER
245
n
44
SER
245
B
PRO
246
n
45
PRO
246
B
PHE
247
n
46
PHE
247
B
VAL
248
n
47
VAL
248
B
ILE
249
n
48
ILE
249
B
TYR
250
n
49
TYR
250
B
ASP
251
n
50
ASP
251
B
MET
252
n
51
MET
252
B
ASN
253
n
52
ASN
253
B
SER
254
n
53
SER
254
B
LEU
255
n
54
LEU
255
B
MET
256
n
55
MET
256
B
MET
257
n
56
MET
257
B
GLY
258
n
57
GLY
258
B
GLU
259
n
58
GLU
259
B
ASP
260
n
59
ASP
260
B
LYS
261
n
60
LYS
261
B
ILE
262
n
61
ILE
262
B
n
62
263
B
n
63
264
B
n
64
265
B
n
65
266
B
n
66
267
B
n
67
268
B
n
68
269
B
n
69
270
B
n
70
271
B
n
71
272
B
n
72
273
B
n
73
274
B
n
74
275
B
GLU
276
n
75
GLU
276
B
VAL
277
n
76
VAL
277
B
ALA
278
n
77
ALA
278
B
ILE
279
n
78
ILE
279
B
ARG
280
n
79
ARG
280
B
ILE
281
n
80
ILE
281
B
PHE
282
n
81
PHE
282
B
GLN
283
n
82
GLN
283
B
GLY
284
n
83
GLY
284
B
CYS
285
n
84
CYS
285
B
GLN
286
n
85
GLN
286
B
PHE
287
n
86
PHE
287
B
ARG
288
n
87
ARG
288
B
SER
289
n
88
SER
289
B
VAL
290
n
89
VAL
290
B
GLU
291
n
90
GLU
291
B
ALA
292
n
91
ALA
292
B
VAL
293
n
92
VAL
293
B
GLN
294
n
93
GLN
294
B
GLU
295
n
94
GLU
295
B
ILE
296
n
95
ILE
296
B
THR
297
n
96
THR
297
B
GLU
298
n
97
GLU
298
B
TYR
299
n
98
TYR
299
B
ALA
300
n
99
ALA
300
B
LYS
301
n
100
LYS
301
B
SER
302
n
101
SER
302
B
ILE
303
n
102
ILE
303
B
PRO
304
n
103
PRO
304
B
GLY
305
n
104
GLY
305
B
PHE
306
n
105
PHE
306
B
VAL
307
n
106
VAL
307
B
ASN
308
n
107
ASN
308
B
LEU
309
n
108
LEU
309
B
ASP
310
n
109
ASP
310
B
LEU
311
n
110
LEU
311
B
ASN
312
n
111
ASN
312
B
ASP
313
n
112
ASP
313
B
GLN
314
n
113
GLN
314
B
VAL
315
n
114
VAL
315
B
THR
316
n
115
THR
316
B
LEU
317
n
116
LEU
317
B
LEU
318
n
117
LEU
318
B
LYS
319
n
118
LYS
319
B
TYR
320
n
119
TYR
320
B
GLY
321
n
120
GLY
321
B
VAL
322
n
121
VAL
322
B
HIS
323
n
122
HIS
323
B
GLU
324
n
123
GLU
324
B
ILE
325
n
124
ILE
325
B
ILE
326
n
125
ILE
326
B
TYR
327
n
126
TYR
327
B
THR
328
n
127
THR
328
B
MET
329
n
128
MET
329
B
LEU
330
n
129
LEU
330
B
ALA
331
n
130
ALA
331
B
SER
332
n
131
SER
332
B
LEU
333
n
132
LEU
333
B
MET
334
n
133
MET
334
B
ASN
335
n
134
ASN
335
B
LYS
336
n
135
LYS
336
B
ASP
337
n
136
ASP
337
B
GLY
338
n
137
GLY
338
B
VAL
339
n
138
VAL
339
B
LEU
340
n
139
LEU
340
B
ILE
341
n
140
ILE
341
B
SER
342
n
141
SER
342
B
GLU
343
n
142
GLU
343
B
GLY
344
n
143
GLY
344
B
GLN
345
n
144
GLN
345
B
GLY
346
n
145
GLY
346
B
PHE
347
n
146
PHE
347
B
MET
348
n
147
MET
348
B
THR
349
n
148
THR
349
B
ARG
350
n
149
ARG
350
B
GLU
351
n
150
GLU
351
B
PHE
352
n
151
PHE
352
B
LEU
353
n
152
LEU
353
B
LYS
354
n
153
LYS
354
B
SER
355
n
154
SER
355
B
LEU
356
n
155
LEU
356
B
ARG
357
n
156
ARG
357
B
LYS
358
n
157
LYS
358
B
PRO
359
n
158
PRO
359
B
PHE
360
n
159
PHE
360
B
GLY
361
n
160
GLY
361
B
ASP
362
n
161
ASP
362
B
PHE
363
n
162
PHE
363
B
MET
364
n
163
MET
364
B
GLU
365
n
164
GLU
365
B
PRO
366
n
165
PRO
366
B
LYS
367
n
166
LYS
367
B
PHE
368
n
167
PHE
368
B
GLU
369
n
168
GLU
369
B
PHE
370
n
169
PHE
370
B
ALA
371
n
170
ALA
371
B
VAL
372
n
171
VAL
372
B
LYS
373
n
172
LYS
373
B
PHE
374
n
173
PHE
374
B
ASN
375
n
174
ASN
375
B
ALA
376
n
175
ALA
376
B
LEU
377
n
176
LEU
377
B
GLU
378
n
177
GLU
378
B
LEU
379
n
178
LEU
379
B
ASP
380
n
179
ASP
380
B
ASP
381
n
180
ASP
381
B
SER
382
n
181
SER
382
B
ASP
383
n
182
ASP
383
B
LEU
384
n
183
LEU
384
B
ALA
385
n
184
ALA
385
B
ILE
386
n
185
ILE
386
B
PHE
387
n
186
PHE
387
B
ILE
388
n
187
ILE
388
B
ALA
389
n
188
ALA
389
B
VAL
390
n
189
VAL
390
B
ILE
391
n
190
ILE
391
B
ILE
392
n
191
ILE
392
B
LEU
393
n
192
LEU
393
B
SER
394
n
193
SER
394
B
GLY
395
n
194
GLY
395
B
ASP
396
n
195
ASP
396
B
ARG
397
n
196
ARG
397
B
PRO
398
n
197
PRO
398
B
GLY
399
n
198
GLY
399
B
LEU
400
n
199
LEU
400
B
LEU
401
n
200
LEU
401
B
ASN
402
n
201
ASN
402
B
VAL
403
n
202
VAL
403
B
LYS
404
n
203
LYS
404
B
PRO
405
n
204
PRO
405
B
ILE
406
n
205
ILE
406
B
GLU
407
n
206
GLU
407
B
ASP
408
n
207
ASP
408
B
ILE
409
n
208
ILE
409
B
GLN
410
n
209
GLN
410
B
ASP
411
n
210
ASP
411
B
ASN
412
n
211
ASN
412
B
LEU
413
n
212
LEU
413
B
LEU
414
n
213
LEU
414
B
GLN
415
n
214
GLN
415
B
ALA
416
n
215
ALA
416
B
LEU
417
n
216
LEU
417
B
GLU
418
n
217
GLU
418
B
LEU
419
n
218
LEU
419
B
GLN
420
n
219
GLN
420
B
LEU
421
n
220
LEU
421
B
LYS
422
n
221
LYS
422
B
LEU
423
n
222
LEU
423
B
ASN
424
n
223
ASN
424
B
HIS
425
n
224
HIS
425
B
PRO
426
n
225
PRO
426
B
GLU
427
n
226
GLU
427
B
SER
428
n
227
SER
428
B
SER
429
n
228
SER
429
B
GLN
430
n
229
GLN
430
B
LEU
431
n
230
LEU
431
B
PHE
432
n
231
PHE
432
B
ALA
433
n
232
ALA
433
B
LYS
434
n
233
LYS
434
B
LEU
435
n
234
LEU
435
B
LEU
436
n
235
LEU
436
B
GLN
437
n
236
GLN
437
B
LYS
438
n
237
LYS
438
B
MET
439
n
238
MET
439
B
THR
440
n
239
THR
440
B
ASP
441
n
240
ASP
441
B
LEU
442
n
241
LEU
442
B
ARG
443
n
242
ARG
443
B
GLN
444
n
243
GLN
444
B
ILE
445
n
244
ILE
445
B
VAL
446
n
245
VAL
446
B
THR
447
n
246
THR
447
B
GLU
448
n
247
GLU
448
B
HIS
449
n
248
HIS
449
B
VAL
450
n
249
VAL
450
B
GLN
451
n
250
GLN
451
B
LEU
452
n
251
LEU
452
B
LEU
453
n
252
LEU
453
B
GLN
454
n
253
GLN
454
B
VAL
455
n
254
VAL
455
B
ILE
456
n
255
ILE
456
B
LYS
457
n
256
LYS
457
B
LYS
458
n
257
LYS
458
B
THR
459
n
258
THR
459
B
n
259
460
B
n
260
461
B
n
261
462
B
n
262
463
B
n
263
464
B
n
264
465
B
n
265
466
B
PRO
467
n
266
PRO
467
B
LEU
468
n
267
LEU
468
B
LEU
469
n
268
LEU
469
B
GLN
470
n
269
GLN
470
B
GLU
471
n
270
GLU
471
B
ILE
472
n
271
ILE
472
B
TYR
473
n
272
TYR
473
B
LYS
474
n
273
LYS
474
B
n
274
475
B
n
275
476
B
n
276
477
B
author_and_software_defined_assembly
PQS
1
monomeric
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
249
A
N
ILE
48
A
O
PHE
347
A
O
PHE
146
A
N
MET
348
A
N
MET
147
A
O
VAL
339
A
O
VAL
138
A
N
GLY
338
A
N
GLY
137
A
O
ASN
335
A
O
ASN
134
B
N
ILE
249
B
N
ILE
48
B
O
PHE
347
B
O
PHE
146
B
N
MET
348
B
N
MET
147
B
O
VAL
339
B
O
VAL
138
B
N
GLY
338
B
N
GLY
137
B
O
ASN
335
B
O
ASN
134
1
A
GLY
202
A
GLY
1
1
Y
1
A
ALA
203
A
ALA
2
1
Y
1
A
LEU
204
A
LEU
3
1
Y
1
A
ASN
205
A
ASN
4
1
Y
1
A
PRO
206
A
PRO
5
1
Y
1
A
THR
241
A
THR
40
1
Y
1
A
PHE
264
A
PHE
63
1
Y
1
A
LYS
265
A
LYS
64
1
Y
1
A
HIS
266
A
HIS
65
1
Y
1
A
ILE
267
A
ILE
66
1
Y
1
A
THR
268
A
THR
67
1
Y
1
A
PRO
269
A
PRO
68
1
Y
1
A
LEU
270
A
LEU
69
1
Y
1
A
GLN
271
A
GLN
70
1
Y
1
A
GLU
272
A
GLU
71
1
Y
1
A
GLN
273
A
GLN
72
1
Y
1
A
SER
274
A
SER
73
1
Y
1
A
LEU
476
A
LEU
275
1
Y
1
A
TYR
477
A
TYR
276
1
Y
1
B
GLY
202
B
GLY
1
1
Y
1
B
ALA
203
B
ALA
2
1
Y
1
B
LEU
204
B
LEU
3
1
Y
1
B
ASN
205
B
ASN
4
1
Y
1
B
PRO
206
B
PRO
5
1
Y
1
B
THR
241
B
THR
40
1
Y
1
B
THR
242
B
THR
41
1
Y
1
B
LYS
263
B
LYS
62
1
Y
1
B
PHE
264
B
PHE
63
1
Y
1
B
LYS
265
B
LYS
64
1
Y
1
B
HIS
266
B
HIS
65
1
Y
1
B
ILE
267
B
ILE
66
1
Y
1
B
THR
268
B
THR
67
1
Y
1
B
PRO
269
B
PRO
68
1
Y
1
B
LEU
270
B
LEU
69
1
Y
1
B
GLN
271
B
GLN
70
1
Y
1
B
GLU
272
B
GLU
71
1
Y
1
B
GLN
273
B
GLN
72
1
Y
1
B
SER
274
B
SER
73
1
Y
1
B
LYS
275
B
LYS
74
1
Y
1
B
GLU
460
B
GLU
259
1
Y
1
B
THR
461
B
THR
260
1
Y
1
B
ASP
462
B
ASP
261
1
Y
1
B
MET
463
B
MET
262
1
Y
1
B
SER
464
B
SER
263
1
Y
1
B
LEU
465
B
LEU
264
1
Y
1
B
HIS
466
B
HIS
265
1
Y
1
B
ASP
475
B
ASP
274
1
Y
1
B
LEU
476
B
LEU
275
1
Y
1
B
TYR
477
B
TYR
276
1
Y
1
A
LYS
261
-139.03
-31.43
1
A
PRO
304
-40.38
109.02
1
A
PRO
359
-95.43
37.01
1
A
ASP
362
-115.95
70.05
1
A
ASP
396
-99.83
41.68
1
B
PRO
227
-59.19
-76.84
1
B
TYR
250
-145.86
-3.46
1
B
VAL
277
-115.24
-89.71
1
B
ARG
357
-45.58
178.55
1
B
PHE
360
-60.04
3.39
1
B
LEU
393
-85.19
49.94
1
B
GLN
430
45.66
24.95
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
4R8_PA.PARAM
4R8_PA.TOP
46.3
1.09
0.00
2.66
12.60
0.00
-13.70
BULK SOLVENT MODEL USED
0.252
0.007
0.225
0.225
2.85
33.61
1412
28148
5.0
92.0
RANDOM
1223872.57
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 2I4P
MLF
FLAT MODEL
39.2092
0.35
0.41
0.35
5.00
0.52
0.46
2.85
33.61
80
4130
25
0
4025
0.010
1.2
19.7
0.82
1.19
1.50
2.08
2.00
1.63
2.00
2.57
2.50
0.371
0.023
0.321
3.03
257
4459
6
5.4
93.4
44.2
2.85
58.12
2VV3
28148
2.0
0.14
1
8.40
2.8
98.5
0.34
2.85
3.00
3.30
1
2.9
99.9
refinement
CNS
1.2
data reduction
MOSFLM
data scaling
SCALA
phasing
PHASER
hPPARgamma Ligand binding domain in complex with 4-oxoDHA
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
A
GLU
207
A
GLU
6
HELX_P
A
PHE
226
A
PHE
25
1
1
20
A
THR
229
A
THR
28
HELX_P
A
GLY
239
A
GLY
38
1
2
11
A
ASP
251
A
ASP
50
HELX_P
A
GLU
259
A
GLU
58
1
3
9
A
GLU
276
A
GLU
75
HELX_P
A
ILE
303
A
ILE
102
1
4
28
A
GLY
305
A
GLY
104
HELX_P
A
LEU
309
A
LEU
108
5
5
5
A
ASP
310
A
ASP
109
HELX_P
A
LEU
333
A
LEU
132
1
6
24
A
SER
342
A
SER
141
HELX_P
A
GLY
344
A
GLY
143
5
7
3
A
ARG
350
A
ARG
149
HELX_P
A
SER
355
A
SER
154
1
8
6
A
MET
364
A
MET
163
HELX_P
A
ALA
376
A
ALA
175
1
9
13
A
ASP
380
A
ASP
179
HELX_P
A
LEU
393
A
LEU
192
1
10
14
A
ASN
402
A
ASN
201
HELX_P
A
HIS
425
A
HIS
224
1
11
24
A
GLN
430
A
GLN
229
HELX_P
A
GLU
460
A
GLU
259
1
12
31
A
HIS
466
A
HIS
265
HELX_P
A
LYS
474
A
LYS
273
1
13
9
B
GLU
207
B
GLU
6
HELX_P
B
PHE
226
B
PHE
25
1
14
20
B
THR
229
B
THR
28
HELX_P
B
GLY
239
B
GLY
38
1
15
11
B
ASP
251
B
ASP
50
HELX_P
B
ILE
262
B
ILE
61
1
16
12
B
VAL
277
B
VAL
76
HELX_P
B
LYS
301
B
LYS
100
1
17
25
B
ASP
310
B
ASP
109
HELX_P
B
ALA
331
B
ALA
130
1
18
22
B
SER
342
B
SER
141
HELX_P
B
GLY
344
B
GLY
143
5
19
3
B
ARG
350
B
ARG
149
HELX_P
B
LYS
354
B
LYS
153
1
20
5
B
MET
364
B
MET
163
HELX_P
B
ALA
376
B
ALA
175
1
21
13
B
ASP
380
B
ASP
179
HELX_P
B
LEU
393
B
LEU
192
1
22
14
B
VAL
403
B
VAL
202
HELX_P
B
HIS
425
B
HIS
224
1
23
23
B
GLN
430
B
GLN
229
HELX_P
B
GLN
437
B
GLN
236
1
24
8
B
GLN
437
B
GLN
236
HELX_P
B
LYS
457
B
LYS
256
1
25
21
B
LEU
468
B
LEU
267
HELX_P
B
LYS
474
B
LYS
273
1
26
7
covale
1.757
none
A
CYS
285
A
SG
CYS
84
1_555
A
4R8
1476
C
C8
4R8
1_555
RECEPTOR
NUCLEAR RECEPTOR, TRANSCRIPTION REGULATION, ALTERNATIVE SPLICING, LIGAND BINDING DOMAIN, DIABETES MELLITUS, ZINC-FINGER, DNA-BINDING, POLYMORPHISM, TRANSCRIPTION, ZINC, OBESITY, NUCLEUS, RECEPTOR, ACTIVATOR, OXIDISED FATTY ACID, TRANSCRIPTION FACTOR, METAL-BINDING, PHOSPHOPROTEIN, DISEASE MUTATION
A
LYS
358
A
LYS
157
1
A
PRO
359
A
PRO
158
0.95
B
LYS
358
B
LYS
157
1
B
PRO
359
B
PRO
158
1.43
2VV3
PDB
1
2VV3
PPARG_HUMAN
UNP
1
P37231
202
203
2VV3
202
203
2VV3
A
1
1
2
202
475
2VV3
204
477
P37231
A
2
3
276
202
203
2VV3
202
203
2VV3
B
1
1
2
202
475
2VV3
204
477
P37231
B
2
3
276
4
4
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
PHE
247
A
PHE
46
A
ILE
249
A
ILE
48
A
GLY
346
A
GLY
145
A
THR
349
A
THR
148
A
GLY
338
A
GLY
137
A
ILE
341
A
ILE
140
A
MET
334
A
MET
133
A
ASN
335
A
ASN
134
B
PHE
247
B
PHE
46
B
ILE
249
B
ILE
48
B
GLY
346
B
GLY
145
B
THR
349
B
THR
148
B
GLY
338
B
GLY
137
B
ILE
341
B
ILE
140
B
MET
334
B
MET
133
B
ASN
335
B
ASN
134
BINDING SITE FOR RESIDUE 4R8 A 1476
A
4R8
1476
Software
14
A
GLY
284
A
GLY
83
14
1_555
A
CYS
285
A
CYS
84
14
1_555
A
ARG
288
A
ARG
87
14
1_555
A
SER
289
A
SER
88
14
1_555
A
HIS
323
A
HIS
122
14
1_555
A
TYR
327
A
TYR
126
14
1_555
A
LEU
340
A
LEU
139
14
1_555
A
ILE
341
A
ILE
140
14
1_555
A
SER
342
A
SER
141
14
1_555
A
LYS
367
A
LYS
166
14
1_555
A
HIS
449
A
HIS
248
14
1_555
A
LEU
469
A
LEU
268
14
1_555
A
TYR
473
A
TYR
272
14
1_555
A
HOH
2044
D
HOH
14
1_555
5
C 1 2 1