0.009472 0.000000 0.000000 0.000000 0.009472 0.000000 0.000000 0.000000 0.009472 0.00000 0.00000 0.00000 Komander, D. Reyes-Turcu, F. Wilkinson, K.D. Barford, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 105.572 105.572 105.572 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C6 H11 N O3 S 177.221 n N-FORMYLMETHIONINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CL N 75 N N N 76 N C N 77 N O N 78 S C N 79 N C N 80 N C N 81 N S N 82 N C N 83 N C N 84 N O N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 N C N 102 N C N 103 N C N 104 N O N 105 N N N 106 N O N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C N 122 N C N 123 N C N 124 N O N 125 N O N 126 N O N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N N N 137 N C N 138 N C N 139 N O N 140 N O N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 S C N 148 N C N 149 N O N 150 N C Y 151 N C Y 152 N N Y 153 N C Y 154 N C Y 155 N N N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N O N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 S C N 175 N C N 176 N C N 177 N C N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N C N 199 N C N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 N C N 219 N C N 220 N C N 221 N C N 222 N N N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N S N 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C Y 269 N C N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C N 287 N C N 288 N C N 289 N O N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N N N 300 S C N 301 N C N 302 N O N 303 N C N 304 N O N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 R C N 318 N O N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C Y 340 N C N 341 N O N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 N C N 359 N C N 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing Y 148 N sing Y 149 N doub Y 150 N doub N 151 N sing Y 152 N sing N 153 N sing Y 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing Y 256 N doub Y 257 N sing Y 258 N sing N 259 N sing Y 260 N doub N 261 N sing Y 262 N doub N 263 N sing Y 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N sing N 328 N sing Y 329 N doub N 330 N sing Y 331 N doub N 332 N sing Y 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing UK Embo Rep. 1469-221X 10 466 10.1038/EMBOR.2009.55 19373254 Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains. 2009 10.2210/pdb2w9n/pdb pdb_00002w9n 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2007-03-12 ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.9537 1.0 ID23-1 ESRF 0.9537 SYNCHROTRON ESRF BEAMLINE ID23-1 TWO UBIQUITIN MOLECULES FUSED HEAD-TO-TAIL 17163.664 UBIQUITIN 1 man polymer 65.409 ZINC ION 4 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 18.015 water 26 nat water DIUBIQUITIN no yes (FME)QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 562 ESCHERICHIA COLI ROSETTA2 PLYSS PRSET 1 2.8 55 NONE 7 22% PEG 3350 AND 200 MM ZNOAC, pH 7 chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Advisory Version format compliance Data collection Database references Derived calculations Other Refinement description 1 0 2009-04-28 1 1 2011-07-13 1 2 2023-12-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SIMULTANEOUS DETERMINATION OF PROTEIN STRUCTURE AND DYNAMICS CRYSTAL STRUCTURE OF LYS63-LINKED DI- UBIQUITIN CRYSTAL STRUCTURE OF THE 9-10 8 GLYCINE INSERTION MUTANT OFUBIQUITIN. UBIQUITIN SOLUTION STRUCTURE OF THE HUMAN MMS2- UBIQUITIN COMPLEX CO-CRYSTAL STRUCTURE OF ZNF UBP DOMAIN FROM THEDEUBIQUITINATING ENZYME ISOPEPTIDASE T (ISOT) IN COMPLEXWITH UBIQUITIN CRYSTAL STRUCTURE OF THE 9-10 MOAD INSERTION MUTANT OFUBIQUITIN CRYSTAL STRUCTURE OF THE UBIQUITIN-SPECIFIC PROTEASE ENCODED BY MURINE CYTOMEGALOVIRUS TEGUMENT PROTEIN M48 IN COMPLEX WITH A UBQUITIN-BASED SUICIDE SUBSTRATE STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN NMR STRUCTURE OF LYS48-LINKED DI-UBIQUITIN USING CHEMICAL SHIFT PERTURBATION DATA TOGETHER WITH RDCS AND 15N-RELAXATION DATA STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTERCOMPLEX TETRAUBIQUITIN STRUCTURE OF USP14 BOUND TO UBQUITIN ALDEHYDE CRYSTAL STRUCTURE OF UCHL3-UBVME COMPLEX SOLUTION STRUCTURE OF A DIMERIC N-TERMINAL FRAGMENT OF HUMAN UBIQUITIN UBIQUITIN STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSEMICELLES CRYSTAL STRUCTURE OF A UBP-FAMILY DEUBIQUITINATING ENZYMEIN ISOLATION AND IN COMPLEX WITH UBIQUITIN ALDEHYDE CRYSTAL STRUCTURE OF A MULTIPLE HYDROPHOBIC CORE MUTANT OFUBIQUITIN UBIQUITIN NMR STRUCTURE SYNTHETIC UBIQUITIN WITH FLUORO-LEU AT 50 AND 67 CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANTOF UBIQUITIN CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANTOF UBIQUITIN SOLUTION STRUCTURE OF S5A UIM-1/UBIQUITIN COMPLEX ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURALSPECIFICITY UBIQUITIN RECOGNITION BY NPL4 ZINC-FINGERS TSG101(UEV) DOMAIN IN COMPLEX WITH UBIQUITIN SOLUTION STRUCTURE OF S5A UIM-2/UBIQUITIN COMPLEX PDBE Y PDBE 2009-01-27 REL REL ZN ZINC ION CL CHLORIDE ION HOH water TWO COPIES OF ENTRY FUSED HEAD-TO-TAIL 1UBQ PDB ENTRY 1UBQ PDB experimental model ZN 1150 2 ZN ZN 1150 A ZN 1151 2 ZN ZN 1151 A ZN 1152 2 ZN ZN 1152 A ZN 1153 2 ZN ZN 1153 A CL 1154 3 CL CL 1154 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A HOH 2011 4 HOH HOH 2011 A HOH 2012 4 HOH HOH 2012 A HOH 2013 4 HOH HOH 2013 A HOH 2014 4 HOH HOH 2014 A HOH 2015 4 HOH HOH 2015 A HOH 2016 4 HOH HOH 2016 A HOH 2017 4 HOH HOH 2017 A HOH 2018 4 HOH HOH 2018 A HOH 2019 4 HOH HOH 2019 A HOH 2020 4 HOH HOH 2020 A HOH 2021 4 HOH HOH 2021 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2024 4 HOH HOH 2024 A HOH 2025 4 HOH HOH 2025 A HOH 2026 4 HOH HOH 2026 A FME 1 n 1 FME 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A PHE 4 n 4 PHE 4 A VAL 5 n 5 VAL 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A LEU 8 n 8 LEU 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A LYS 11 n 11 LYS 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A THR 14 n 14 THR 14 A LEU 15 n 15 LEU 15 A GLU 16 n 16 GLU 16 A VAL 17 n 17 VAL 17 A GLU 18 n 18 GLU 18 A PRO 19 n 19 PRO 19 A SER 20 n 20 SER 20 A ASP 21 n 21 ASP 21 A THR 22 n 22 THR 22 A ILE 23 n 23 ILE 23 A GLU 24 n 24 GLU 24 A ASN 25 n 25 ASN 25 A VAL 26 n 26 VAL 26 A LYS 27 n 27 LYS 27 A ALA 28 n 28 ALA 28 A LYS 29 n 29 LYS 29 A ILE 30 n 30 ILE 30 A GLN 31 n 31 GLN 31 A ASP 32 n 32 ASP 32 A LYS 33 n 33 LYS 33 A GLU 34 n 34 GLU 34 A GLY 35 n 35 GLY 35 A ILE 36 n 36 ILE 36 A PRO 37 n 37 PRO 37 A PRO 38 n 38 PRO 38 A ASP 39 n 39 ASP 39 A GLN 40 n 40 GLN 40 A GLN 41 n 41 GLN 41 A ARG 42 n 42 ARG 42 A LEU 43 n 43 LEU 43 A ILE 44 n 44 ILE 44 A PHE 45 n 45 PHE 45 A ALA 46 n 46 ALA 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A GLN 49 n 49 GLN 49 A LEU 50 n 50 LEU 50 A GLU 51 n 51 GLU 51 A ASP 52 n 52 ASP 52 A GLY 53 n 53 GLY 53 A ARG 54 n 54 ARG 54 A THR 55 n 55 THR 55 A LEU 56 n 56 LEU 56 A SER 57 n 57 SER 57 A ASP 58 n 58 ASP 58 A TYR 59 n 59 TYR 59 A ASN 60 n 60 ASN 60 A ILE 61 n 61 ILE 61 A GLN 62 n 62 GLN 62 A LYS 63 n 63 LYS 63 A GLU 64 n 64 GLU 64 A SER 65 n 65 SER 65 A THR 66 n 66 THR 66 A LEU 67 n 67 LEU 67 A HIS 68 n 68 HIS 68 A LEU 69 n 69 LEU 69 A VAL 70 n 70 VAL 70 A LEU 71 n 71 LEU 71 A ARG 72 n 72 ARG 72 A LEU 73 n 73 LEU 73 A ARG 74 n 74 ARG 74 A GLY 75 n 75 GLY 75 A GLY 76 n 76 GLY 76 A MET 77 n 77 MET 77 A GLN 78 n 78 GLN 78 A ILE 79 n 79 ILE 79 A PHE 80 n 80 PHE 80 A VAL 81 n 81 VAL 81 A LYS 82 n 82 LYS 82 A THR 83 n 83 THR 83 A LEU 84 n 84 LEU 84 A THR 85 n 85 THR 85 A GLY 86 n 86 GLY 86 A LYS 87 n 87 LYS 87 A THR 88 n 88 THR 88 A ILE 89 n 89 ILE 89 A THR 90 n 90 THR 90 A LEU 91 n 91 LEU 91 A GLU 92 n 92 GLU 92 A VAL 93 n 93 VAL 93 A GLU 94 n 94 GLU 94 A PRO 95 n 95 PRO 95 A SER 96 n 96 SER 96 A ASP 97 n 97 ASP 97 A THR 98 n 98 THR 98 A ILE 99 n 99 ILE 99 A GLU 100 n 100 GLU 100 A ASN 101 n 101 ASN 101 A VAL 102 n 102 VAL 102 A LYS 103 n 103 LYS 103 A ALA 104 n 104 ALA 104 A LYS 105 n 105 LYS 105 A ILE 106 n 106 ILE 106 A GLN 107 n 107 GLN 107 A ASP 108 n 108 ASP 108 A LYS 109 n 109 LYS 109 A GLU 110 n 110 GLU 110 A GLY 111 n 111 GLY 111 A ILE 112 n 112 ILE 112 A PRO 113 n 113 PRO 113 A PRO 114 n 114 PRO 114 A ASP 115 n 115 ASP 115 A GLN 116 n 116 GLN 116 A GLN 117 n 117 GLN 117 A ARG 118 n 118 ARG 118 A LEU 119 n 119 LEU 119 A ILE 120 n 120 ILE 120 A PHE 121 n 121 PHE 121 A ALA 122 n 122 ALA 122 A GLY 123 n 123 GLY 123 A LYS 124 n 124 LYS 124 A GLN 125 n 125 GLN 125 A LEU 126 n 126 LEU 126 A GLU 127 n 127 GLU 127 A ASP 128 n 128 ASP 128 A GLY 129 n 129 GLY 129 A ARG 130 n 130 ARG 130 A THR 131 n 131 THR 131 A LEU 132 n 132 LEU 132 A SER 133 n 133 SER 133 A ASP 134 n 134 ASP 134 A TYR 135 n 135 TYR 135 A ASN 136 n 136 ASN 136 A ILE 137 n 137 ILE 137 A GLN 138 n 138 GLN 138 A LYS 139 n 139 LYS 139 A GLU 140 n 140 GLU 140 A SER 141 n 141 SER 141 A THR 142 n 142 THR 142 A LEU 143 n 143 LEU 143 A HIS 144 n 144 HIS 144 A LEU 145 n 145 LEU 145 A VAL 146 n 146 VAL 146 A LEU 147 n 147 LEU 147 A ARG 148 n 148 ARG 148 A LEU 149 n 149 LEU 149 A n 150 150 A n 151 151 A n 152 152 A 9.0846 3.3463 -0.0458 2.0253 0.1913 0.6035 0.1961 -0.3593 -0.2625 0.0820 -0.0881 -0.3045 -0.0076 0.0864 -0.1080 0.1253 -0.0186 0.0065 0.0273 -0.0099 0.0686 refined 46.5825 74.9048 33.6201 X-RAY DIFFRACTION A 1 A 149 X-RAY DIFFRACTION 1 author_and_software_defined_assembly PQS 1 monomeric A GLU 18 A OE2 GLU 18 1_555 A ZN 1150 B ZN ZN 1_555 A ASP 21 A OD1 ASP 21 6_566 93.0 A GLU 18 A OE2 GLU 18 1_555 A ZN 1150 B ZN ZN 1_555 A CL 1154 F CL CL 6_566 121.6 A ASP 21 A OD1 ASP 21 6_566 A ZN 1150 B ZN ZN 1_555 A CL 1154 F CL CL 6_566 145.5 A GLU 94 A OE1 GLU 94 7_564 A ZN 1151 C ZN ZN 1_555 A ASP 97 A OD1 ASP 97 1_555 101.8 A GLU 94 A OE1 GLU 94 7_564 A ZN 1151 C ZN ZN 1_555 A HOH 2026 G O HOH 1_555 80.0 A ASP 97 A OD1 ASP 97 1_555 A ZN 1151 C ZN ZN 1_555 A HOH 2026 G O HOH 1_555 74.4 A GLU 140 A OE2 GLU 140 1_555 A ZN 1152 D ZN ZN 1_555 A GLU 140 A OE1 GLU 140 1_555 57.8 A GLU 140 A OE2 GLU 140 1_555 A ZN 1152 D ZN ZN 1_555 A HIS 144 A NE2 HIS 144 18_554 77.3 A GLU 140 A OE1 GLU 140 1_555 A ZN 1152 D ZN ZN 1_555 A HIS 144 A NE2 HIS 144 18_554 124.3 A FME 1 N-FORMYLMETHIONINE A FME 1 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 15 A N LEU 15 A O ILE 3 A O ILE 3 A N LYS 6 A N LYS 6 A O LEU 67 A O LEU 67 A N VAL 70 A N VAL 70 A O ARG 42 A O ARG 42 A N PHE 45 A N PHE 45 A O LYS 48 A O LYS 48 A N LEU 91 A N LEU 91 A O ILE 79 A O ILE 79 A N LYS 82 A N LYS 82 A O LEU 143 A O LEU 143 A N VAL 146 A N VAL 146 A O ARG 118 A O ARG 118 A N PHE 121 A N PHE 121 A O LYS 124 A O LYS 124 1 A ARG 150 A ARG 150 1 Y 1 A GLY 151 A GLY 151 1 Y 1 A GLY 152 A GLY 152 1 Y 1 A A OE2 O GLU HOH 140 2023 2.01 77.15 0.919 0.934 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 0.276 0.259 0.260 2.25 30.00 478 9431 4.800 98.7 16.581 0.207 RANDOM LIKELY RESIDUAL 1 THROUGHOUT MOLECULAR REPLACEMENT 0.307 0.228 0.80 0.80 1.40 PDB ENTRY 1UBQ MAXIMUM LIKELIHOOD MASK 2.25 30.00 26 1216 5 0 1185 0.020 0.022 1198 1.927 2.001 1613 7.510 5.000 148 34.869 25.849 53 19.553 15.000 242 24.087 15.000 7 0.120 0.200 193 0.007 0.020 859 0.226 0.200 435 0.308 0.200 792 0.183 0.200 44 0.261 0.200 53 0.214 0.200 9 0.895 1.500 771 1.441 2.000 1211 2.518 3.000 469 3.940 4.500 402 0.7700 0.4810 2.31 30 630 20 2.25 74.74 2W9N 9985 2.0 0.11 1 27.40 17.1 99.1 0.54 2.25 2.37 2.00 1 5.8 96.9 refinement REFMAC 5.2.0019 data reduction MOSFLM data scaling SCALA phasing PHASER crystal structure of linear di-ubiquitin 1 N N 2 N N 2 N N 2 N N 2 N N 3 N N 4 N N A THR 22 A THR 22 HELX_P A GLY 35 A GLY 35 1 1 14 A PRO 37 A PRO 37 HELX_P A ASP 39 A ASP 39 5 2 3 A LEU 56 A LEU 56 HELX_P A ASN 60 A ASN 60 5 3 5 A THR 98 A THR 98 HELX_P A GLY 111 A GLY 111 1 4 14 A PRO 113 A PRO 113 HELX_P A ASP 115 A ASP 115 5 5 3 covale 1.336 both A FME 1 A C FME 1 1_555 A GLN 2 A N GLN 2 1_555 metalc 2.165 A GLU 18 A OE2 GLU 18 1_555 A ZN 1150 B ZN ZN 1_555 metalc 2.111 A ASP 21 A OD1 ASP 21 6_566 A ZN 1150 B ZN ZN 1_555 metalc 2.012 A GLU 94 A OE1 GLU 94 7_564 A ZN 1151 C ZN ZN 1_555 metalc 2.037 A ASP 97 A OD1 ASP 97 1_555 A ZN 1151 C ZN ZN 1_555 metalc 2.018 A ASP 128 A OD2 ASP 128 1_555 A ZN 1153 E ZN ZN 1_555 metalc 2.333 A GLU 140 A OE2 GLU 140 1_555 A ZN 1152 D ZN ZN 1_555 metalc 2.147 A GLU 140 A OE1 GLU 140 1_555 A ZN 1152 D ZN ZN 1_555 metalc 2.118 A HIS 144 A NE2 HIS 144 18_554 A ZN 1152 D ZN ZN 1_555 metalc 2.300 A ZN 1150 B ZN ZN 1_555 A CL 1154 F CL CL 6_566 metalc 1.827 A ZN 1151 C ZN ZN 1_555 A HOH 2026 G O HOH 1_555 CELL CYCLE CELL CYCLE, K63, IKK, NEMO, LYS63, LINEAR, UBIQUITIN, SIGNALLING CELL CYCLE UBIQ_HUMAN UNP 1 P62988 1 76 2W9N 1 76 P62988 A 1 1 76 1 76 2W9N 77 152 P62988 A 1 77 152 5 5 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A THR 12 A THR 12 A LEU 15 A LEU 15 A ILE 3 A ILE 3 A LYS 6 A LYS 6 A THR 66 A THR 66 A LEU 71 A LEU 71 A GLN 41 A GLN 41 A PHE 45 A PHE 45 A LYS 48 A LYS 48 A GLN 49 A GLN 49 A THR 88 A THR 88 A GLU 92 A GLU 92 A GLN 78 A GLN 78 A LYS 82 A LYS 82 A THR 142 A THR 142 A LEU 147 A LEU 147 A GLN 117 A GLN 117 A PHE 121 A PHE 121 A LYS 124 A LYS 124 A GLN 125 A GLN 125 BINDING SITE FOR RESIDUE ZN A 1150 A ZN 1150 Software 4 BINDING SITE FOR RESIDUE ZN A 1151 A ZN 1151 Software 5 BINDING SITE FOR RESIDUE ZN A 1152 A ZN 1152 Software 2 BINDING SITE FOR RESIDUE ZN A 1153 A ZN 1153 Software 2 BINDING SITE FOR RESIDUE CL A 1154 A CL 1154 Software 3 A GLU 18 A GLU 18 4 1_555 A ASP 21 A ASP 21 4 6_566 A CL 1154 F CL 4 6_566 A HOH 2003 G HOH 4 1_555 A GLU 94 A GLU 94 5 7_564 A ASP 97 A ASP 97 5 1_555 A LYS 105 A LYS 105 5 1_555 A HOH 2025 G HOH 5 1_555 A HOH 2026 G HOH 5 1_555 A GLU 140 A GLU 140 2 1_555 A HIS 144 A HIS 144 2 18_554 A LYS 103 A LYS 103 2 1_555 A ASP 128 A ASP 128 2 1_555 A ASP 21 A ASP 21 3 1_555 A ZN 1150 B ZN 3 12_664 A HOH 2002 G HOH 3 1_555 212 P 43 3 2