0.013000
0.000000
0.000000
0.000000
0.010617
0.000000
0.000000
0.000000
0.021744
0.00000
0.00000
0.00000
McTigue, M.
Grodsky, N.
Ryan, K.
Tran-Dube, M.
Cui, J.J.
Mroczkowski, B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
76.926
94.192
45.990
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C21 H22 Cl2 F N5 O
450.337
3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine
CRIZOTINIB
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
CL
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
N
396
N
F
Y
397
N
C
Y
398
N
C
N
399
N
CL
N
400
R
C
N
401
N
C
N
402
N
O
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
N
Y
407
N
N
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
N
Y
414
N
N
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
N
N
419
N
C
N
420
N
C
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
Y
377
N
sing
Y
378
N
doub
Y
379
N
doub
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
Y
398
N
doub
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
US
J.Med.Chem
JMCMAR
0151
0022-2623
54
6342
10.1021/JM2007613
21812414
Structure Based Drug Design of Crizotinib (Pf-02341066), a Potent and Selective Dual Inhibitor of Mesenchymal-Epithelial Transition Factor (C-met) Kinase and Anaplastic Lymphoma Kinase (Alk).
2011
10.2210/pdb2wgj/pdb
pdb_00002wgj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
95
1
PINHOLE COLLIMATOR
CCD
2006-04-30
ADSC CCD
DOUBLE CRYSTAL SI(111)
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
5.0.2
ALS
1.00
SYNCHROTRON
ALS BEAMLINE 5.0.2
34879.414
HEPATOCYTE GROWTH FACTOR RECEPTOR
2.7.10.1
TYROSINE KINASE DOMAIN, RESIDUES 1051-1348
1
man
polymer
450.337
3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine
1
syn
non-polymer
18.015
water
180
nat
water
HGF RECEPTOR, SCATTER FACTOR RECEPTOR, SF RECEPTOR, HGF/SF RECEPTOR, MET PROTO-ONCOGENE TYROSINE KINASE, C-MET
no
no
MVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI
IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN
CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT
FDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHHHHHHHH
MVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI
IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN
CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT
FDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHHHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
SF9
7108
SPODOPTERA FRUGIPERDA
BACULOVIRUS
PFASTBAC1
1
2.36
47.50
NONE
VAPOR DIFFUSION, HANGING DROP
4.6
CRYSTALS WERE GROWN BY HANGING DROP VAPOR DIFFUSION AT 13 DEGREES CELCIUS. 1-2 MICROLITERS OF PROTEIN SOLUTION AT 7-15 MG/ML WAS MIXEDWITH AN EQUAL VOLUME OF PRECIPITATING SOLUTION (0-275 MM SODIUM CHLORIDE, 21% (W/V PEG 3350, 50 MM CITRATE-PHOSPHATE PH 4.6)
286
database_PDB_rev
database_PDB_rev_record
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Database references
Non-polymer description
Structure summary
Version format compliance
Data collection
Experimental preparation
Other
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2009-06-02
1
1
2011-09-28
1
2
2019-05-08
1
3
2023-12-13
_exptl_crystal_grow.method
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF THEHEPATOCYTE GROWTH FACTOR RECEPTOR C-MET
3D STRUCTURE PREDICTION OF AMINO ACIDS 25 TO 656 OF HUMAN HEPATOCYTE GROWTH FACTOR/ SCATTER FACTOR (MET) RECEPTOR
DIMER FORMATION THROUGH DOMAIN SWAPPING IN THE CRYSTALSTRUCTURE OF THE GRB2-SH2 AC- PYVNV COMPLEX
HUMAN C-MET KINASE IN COMPLEX WITH AZAINDOLE INHIBITOR
3D STRUCTURE PREDICTION OF THE IG2-IG4 DOMAINS OF THE ECTODOMAIN REGION OF THE HUMAN HEPATOCYTE GROWTH FACTOR-SCATTER FACTOR RECEPTOR, MET
THE CRYSTAL STRUCTURE OF HGF BETA-CHAIN IN COMPLEX WITH THESEMA DOMAIN OF THE MET RECEPTOR.
STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: CRYSTAL FORM I
STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: LOW RESOLUTION, CRYSTAL FORM II
STRUCTURAL CHARACTERIZATION OF AUTOINHIBITED C- MET KINASE
SOLUTION STRUCTURE OF THE PSI DOMAIN FROM THE MET RECEPTOR
CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF THEHEPATOCYTE GROWTH FACTOR RECEPTOR C-MET IN COMPLEX WITHTHE MICROBIAL ALKALOID K-252A
PDBE
Y
PDBE
2009-04-20
REL
REL
1
A
O
HOH
2027
7.11
1
A
O
HOH
2029
7.75
VGH
3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine
HOH
water
3LCK
PDB ENTRY 3LCK
PDB
experimental model
VGH
2346
2
VGH
VGH
2346
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2045
3
HOH
HOH
2045
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2047
3
HOH
HOH
2047
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2051
3
HOH
HOH
2051
A
HOH
2052
3
HOH
HOH
2052
A
HOH
2053
3
HOH
HOH
2053
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2056
3
HOH
HOH
2056
A
HOH
2057
3
HOH
HOH
2057
A
HOH
2058
3
HOH
HOH
2058
A
HOH
2059
3
HOH
HOH
2059
A
HOH
2060
3
HOH
HOH
2060
A
HOH
2061
3
HOH
HOH
2061
A
HOH
2062
3
HOH
HOH
2062
A
HOH
2063
3
HOH
HOH
2063
A
HOH
2064
3
HOH
HOH
2064
A
HOH
2065
3
HOH
HOH
2065
A
HOH
2066
3
HOH
HOH
2066
A
HOH
2067
3
HOH
HOH
2067
A
HOH
2068
3
HOH
HOH
2068
A
HOH
2069
3
HOH
HOH
2069
A
HOH
2070
3
HOH
HOH
2070
A
HOH
2071
3
HOH
HOH
2071
A
HOH
2072
3
HOH
HOH
2072
A
HOH
2073
3
HOH
HOH
2073
A
HOH
2074
3
HOH
HOH
2074
A
HOH
2075
3
HOH
HOH
2075
A
HOH
2076
3
HOH
HOH
2076
A
HOH
2077
3
HOH
HOH
2077
A
HOH
2078
3
HOH
HOH
2078
A
HOH
2079
3
HOH
HOH
2079
A
HOH
2080
3
HOH
HOH
2080
A
HOH
2081
3
HOH
HOH
2081
A
HOH
2082
3
HOH
HOH
2082
A
HOH
2083
3
HOH
HOH
2083
A
HOH
2084
3
HOH
HOH
2084
A
HOH
2085
3
HOH
HOH
2085
A
HOH
2086
3
HOH
HOH
2086
A
HOH
2087
3
HOH
HOH
2087
A
HOH
2088
3
HOH
HOH
2088
A
HOH
2089
3
HOH
HOH
2089
A
HOH
2090
3
HOH
HOH
2090
A
HOH
2091
3
HOH
HOH
2091
A
HOH
2092
3
HOH
HOH
2092
A
HOH
2093
3
HOH
HOH
2093
A
HOH
2094
3
HOH
HOH
2094
A
HOH
2095
3
HOH
HOH
2095
A
HOH
2096
3
HOH
HOH
2096
A
HOH
2097
3
HOH
HOH
2097
A
HOH
2098
3
HOH
HOH
2098
A
HOH
2099
3
HOH
HOH
2099
A
HOH
2100
3
HOH
HOH
2100
A
HOH
2101
3
HOH
HOH
2101
A
HOH
2102
3
HOH
HOH
2102
A
HOH
2103
3
HOH
HOH
2103
A
HOH
2104
3
HOH
HOH
2104
A
HOH
2105
3
HOH
HOH
2105
A
HOH
2106
3
HOH
HOH
2106
A
HOH
2107
3
HOH
HOH
2107
A
HOH
2108
3
HOH
HOH
2108
A
HOH
2109
3
HOH
HOH
2109
A
HOH
2110
3
HOH
HOH
2110
A
HOH
2111
3
HOH
HOH
2111
A
HOH
2112
3
HOH
HOH
2112
A
HOH
2113
3
HOH
HOH
2113
A
HOH
2114
3
HOH
HOH
2114
A
HOH
2115
3
HOH
HOH
2115
A
HOH
2116
3
HOH
HOH
2116
A
HOH
2117
3
HOH
HOH
2117
A
HOH
2118
3
HOH
HOH
2118
A
HOH
2119
3
HOH
HOH
2119
A
HOH
2120
3
HOH
HOH
2120
A
HOH
2121
3
HOH
HOH
2121
A
HOH
2122
3
HOH
HOH
2122
A
HOH
2123
3
HOH
HOH
2123
A
HOH
2124
3
HOH
HOH
2124
A
HOH
2125
3
HOH
HOH
2125
A
HOH
2126
3
HOH
HOH
2126
A
HOH
2127
3
HOH
HOH
2127
A
HOH
2128
3
HOH
HOH
2128
A
HOH
2129
3
HOH
HOH
2129
A
HOH
2130
3
HOH
HOH
2130
A
HOH
2131
3
HOH
HOH
2131
A
HOH
2132
3
HOH
HOH
2132
A
HOH
2133
3
HOH
HOH
2133
A
HOH
2134
3
HOH
HOH
2134
A
HOH
2135
3
HOH
HOH
2135
A
HOH
2136
3
HOH
HOH
2136
A
HOH
2137
3
HOH
HOH
2137
A
HOH
2138
3
HOH
HOH
2138
A
HOH
2139
3
HOH
HOH
2139
A
HOH
2140
3
HOH
HOH
2140
A
HOH
2141
3
HOH
HOH
2141
A
HOH
2142
3
HOH
HOH
2142
A
HOH
2143
3
HOH
HOH
2143
A
HOH
2144
3
HOH
HOH
2144
A
HOH
2145
3
HOH
HOH
2145
A
HOH
2146
3
HOH
HOH
2146
A
HOH
2147
3
HOH
HOH
2147
A
HOH
2148
3
HOH
HOH
2148
A
HOH
2149
3
HOH
HOH
2149
A
HOH
2150
3
HOH
HOH
2150
A
HOH
2151
3
HOH
HOH
2151
A
HOH
2152
3
HOH
HOH
2152
A
HOH
2153
3
HOH
HOH
2153
A
HOH
2154
3
HOH
HOH
2154
A
HOH
2155
3
HOH
HOH
2155
A
HOH
2156
3
HOH
HOH
2156
A
HOH
2157
3
HOH
HOH
2157
A
HOH
2158
3
HOH
HOH
2158
A
HOH
2159
3
HOH
HOH
2159
A
HOH
2160
3
HOH
HOH
2160
A
HOH
2161
3
HOH
HOH
2161
A
HOH
2162
3
HOH
HOH
2162
A
HOH
2163
3
HOH
HOH
2163
A
HOH
2164
3
HOH
HOH
2164
A
HOH
2165
3
HOH
HOH
2165
A
HOH
2166
3
HOH
HOH
2166
A
HOH
2167
3
HOH
HOH
2167
A
HOH
2168
3
HOH
HOH
2168
A
HOH
2169
3
HOH
HOH
2169
A
HOH
2170
3
HOH
HOH
2170
A
HOH
2171
3
HOH
HOH
2171
A
HOH
2172
3
HOH
HOH
2172
A
HOH
2173
3
HOH
HOH
2173
A
HOH
2174
3
HOH
HOH
2174
A
HOH
2175
3
HOH
HOH
2175
A
HOH
2176
3
HOH
HOH
2176
A
HOH
2177
3
HOH
HOH
2177
A
HOH
2178
3
HOH
HOH
2178
A
HOH
2179
3
HOH
HOH
2179
A
HOH
2180
3
HOH
HOH
2180
A
HOH
2181
3
HOH
HOH
2181
A
n
1
1050
A
n
2
1051
A
HIS
1052
n
3
HIS
1052
A
ILE
1053
n
4
ILE
1053
A
ASP
1054
n
5
ASP
1054
A
LEU
1055
n
6
LEU
1055
A
SER
1056
n
7
SER
1056
A
ALA
1057
n
8
ALA
1057
A
LEU
1058
n
9
LEU
1058
A
ASN
1059
n
10
ASN
1059
A
PRO
1060
n
11
PRO
1060
A
GLU
1061
n
12
GLU
1061
A
LEU
1062
n
13
LEU
1062
A
VAL
1063
n
14
VAL
1063
A
GLN
1064
n
15
GLN
1064
A
ALA
1065
n
16
ALA
1065
A
VAL
1066
n
17
VAL
1066
A
GLN
1067
n
18
GLN
1067
A
HIS
1068
n
19
HIS
1068
A
VAL
1069
n
20
VAL
1069
A
VAL
1070
n
21
VAL
1070
A
ILE
1071
n
22
ILE
1071
A
GLY
1072
n
23
GLY
1072
A
PRO
1073
n
24
PRO
1073
A
SER
1074
n
25
SER
1074
A
SER
1075
n
26
SER
1075
A
LEU
1076
n
27
LEU
1076
A
ILE
1077
n
28
ILE
1077
A
VAL
1078
n
29
VAL
1078
A
HIS
1079
n
30
HIS
1079
A
PHE
1080
n
31
PHE
1080
A
ASN
1081
n
32
ASN
1081
A
GLU
1082
n
33
GLU
1082
A
VAL
1083
n
34
VAL
1083
A
ILE
1084
n
35
ILE
1084
A
GLY
1085
n
36
GLY
1085
A
ARG
1086
n
37
ARG
1086
A
GLY
1087
n
38
GLY
1087
A
HIS
1088
n
39
HIS
1088
A
PHE
1089
n
40
PHE
1089
A
GLY
1090
n
41
GLY
1090
A
CYS
1091
n
42
CYS
1091
A
VAL
1092
n
43
VAL
1092
A
TYR
1093
n
44
TYR
1093
A
HIS
1094
n
45
HIS
1094
A
GLY
1095
n
46
GLY
1095
A
THR
1096
n
47
THR
1096
A
LEU
1097
n
48
LEU
1097
A
LEU
1098
n
49
LEU
1098
A
n
50
1099
A
n
51
1100
A
n
52
1101
A
n
53
1102
A
LYS
1103
n
54
LYS
1103
A
LYS
1104
n
55
LYS
1104
A
ILE
1105
n
56
ILE
1105
A
HIS
1106
n
57
HIS
1106
A
CYS
1107
n
58
CYS
1107
A
ALA
1108
n
59
ALA
1108
A
VAL
1109
n
60
VAL
1109
A
LYS
1110
n
61
LYS
1110
A
SER
1111
n
62
SER
1111
A
LEU
1112
n
63
LEU
1112
A
ASN
1113
n
64
ASN
1113
A
ARG
1114
n
65
ARG
1114
A
ILE
1115
n
66
ILE
1115
A
THR
1116
n
67
THR
1116
A
ASP
1117
n
68
ASP
1117
A
ILE
1118
n
69
ILE
1118
A
GLY
1119
n
70
GLY
1119
A
GLU
1120
n
71
GLU
1120
A
VAL
1121
n
72
VAL
1121
A
SER
1122
n
73
SER
1122
A
GLN
1123
n
74
GLN
1123
A
PHE
1124
n
75
PHE
1124
A
LEU
1125
n
76
LEU
1125
A
THR
1126
n
77
THR
1126
A
GLU
1127
n
78
GLU
1127
A
GLY
1128
n
79
GLY
1128
A
ILE
1129
n
80
ILE
1129
A
ILE
1130
n
81
ILE
1130
A
MET
1131
n
82
MET
1131
A
LYS
1132
n
83
LYS
1132
A
ASP
1133
n
84
ASP
1133
A
PHE
1134
n
85
PHE
1134
A
SER
1135
n
86
SER
1135
A
HIS
1136
n
87
HIS
1136
A
PRO
1137
n
88
PRO
1137
A
ASN
1138
n
89
ASN
1138
A
VAL
1139
n
90
VAL
1139
A
LEU
1140
n
91
LEU
1140
A
SER
1141
n
92
SER
1141
A
LEU
1142
n
93
LEU
1142
A
LEU
1143
n
94
LEU
1143
A
GLY
1144
n
95
GLY
1144
A
ILE
1145
n
96
ILE
1145
A
CYS
1146
n
97
CYS
1146
A
LEU
1147
n
98
LEU
1147
A
ARG
1148
n
99
ARG
1148
A
SER
1149
n
100
SER
1149
A
GLU
1150
n
101
GLU
1150
A
GLY
1151
n
102
GLY
1151
A
SER
1152
n
103
SER
1152
A
PRO
1153
n
104
PRO
1153
A
LEU
1154
n
105
LEU
1154
A
VAL
1155
n
106
VAL
1155
A
VAL
1156
n
107
VAL
1156
A
LEU
1157
n
108
LEU
1157
A
PRO
1158
n
109
PRO
1158
A
TYR
1159
n
110
TYR
1159
A
MET
1160
n
111
MET
1160
A
LYS
1161
n
112
LYS
1161
A
HIS
1162
n
113
HIS
1162
A
GLY
1163
n
114
GLY
1163
A
ASP
1164
n
115
ASP
1164
A
LEU
1165
n
116
LEU
1165
A
ARG
1166
n
117
ARG
1166
A
ASN
1167
n
118
ASN
1167
A
PHE
1168
n
119
PHE
1168
A
ILE
1169
n
120
ILE
1169
A
ARG
1170
n
121
ARG
1170
A
ASN
1171
n
122
ASN
1171
A
GLU
1172
n
123
GLU
1172
A
THR
1173
n
124
THR
1173
A
HIS
1174
n
125
HIS
1174
A
ASN
1175
n
126
ASN
1175
A
PRO
1176
n
127
PRO
1176
A
THR
1177
n
128
THR
1177
A
VAL
1178
n
129
VAL
1178
A
LYS
1179
n
130
LYS
1179
A
ASP
1180
n
131
ASP
1180
A
LEU
1181
n
132
LEU
1181
A
ILE
1182
n
133
ILE
1182
A
GLY
1183
n
134
GLY
1183
A
PHE
1184
n
135
PHE
1184
A
GLY
1185
n
136
GLY
1185
A
LEU
1186
n
137
LEU
1186
A
GLN
1187
n
138
GLN
1187
A
VAL
1188
n
139
VAL
1188
A
ALA
1189
n
140
ALA
1189
A
LYS
1190
n
141
LYS
1190
A
GLY
1191
n
142
GLY
1191
A
MET
1192
n
143
MET
1192
A
LYS
1193
n
144
LYS
1193
A
TYR
1194
n
145
TYR
1194
A
LEU
1195
n
146
LEU
1195
A
ALA
1196
n
147
ALA
1196
A
SER
1197
n
148
SER
1197
A
LYS
1198
n
149
LYS
1198
A
LYS
1199
n
150
LYS
1199
A
PHE
1200
n
151
PHE
1200
A
VAL
1201
n
152
VAL
1201
A
HIS
1202
n
153
HIS
1202
A
ARG
1203
n
154
ARG
1203
A
ASP
1204
n
155
ASP
1204
A
LEU
1205
n
156
LEU
1205
A
ALA
1206
n
157
ALA
1206
A
ALA
1207
n
158
ALA
1207
A
ARG
1208
n
159
ARG
1208
A
ASN
1209
n
160
ASN
1209
A
CYS
1210
n
161
CYS
1210
A
MET
1211
n
162
MET
1211
A
LEU
1212
n
163
LEU
1212
A
ASP
1213
n
164
ASP
1213
A
GLU
1214
n
165
GLU
1214
A
LYS
1215
n
166
LYS
1215
A
PHE
1216
n
167
PHE
1216
A
THR
1217
n
168
THR
1217
A
VAL
1218
n
169
VAL
1218
A
LYS
1219
n
170
LYS
1219
A
VAL
1220
n
171
VAL
1220
A
ALA
1221
n
172
ALA
1221
A
ASP
1222
n
173
ASP
1222
A
PHE
1223
n
174
PHE
1223
A
GLY
1224
n
175
GLY
1224
A
LEU
1225
n
176
LEU
1225
A
ALA
1226
n
177
ALA
1226
A
ARG
1227
n
178
ARG
1227
A
ASP
1228
n
179
ASP
1228
A
MET
1229
n
180
MET
1229
A
TYR
1230
n
181
TYR
1230
A
ASP
1231
n
182
ASP
1231
A
LYS
1232
n
183
LYS
1232
A
GLU
1233
n
184
GLU
1233
A
TYR
1234
n
185
TYR
1234
A
TYR
1235
n
186
TYR
1235
A
SER
1236
n
187
SER
1236
A
VAL
1237
n
188
VAL
1237
A
HIS
1238
n
189
HIS
1238
A
ASN
1239
n
190
ASN
1239
A
LYS
1240
n
191
LYS
1240
A
THR
1241
n
192
THR
1241
A
GLY
1242
n
193
GLY
1242
A
ALA
1243
n
194
ALA
1243
A
LYS
1244
n
195
LYS
1244
A
LEU
1245
n
196
LEU
1245
A
PRO
1246
n
197
PRO
1246
A
VAL
1247
n
198
VAL
1247
A
LYS
1248
n
199
LYS
1248
A
TRP
1249
n
200
TRP
1249
A
MET
1250
n
201
MET
1250
A
ALA
1251
n
202
ALA
1251
A
LEU
1252
n
203
LEU
1252
A
GLU
1253
n
204
GLU
1253
A
SER
1254
n
205
SER
1254
A
LEU
1255
n
206
LEU
1255
A
GLN
1256
n
207
GLN
1256
A
THR
1257
n
208
THR
1257
A
GLN
1258
n
209
GLN
1258
A
LYS
1259
n
210
LYS
1259
A
PHE
1260
n
211
PHE
1260
A
THR
1261
n
212
THR
1261
A
THR
1262
n
213
THR
1262
A
LYS
1263
n
214
LYS
1263
A
SER
1264
n
215
SER
1264
A
ASP
1265
n
216
ASP
1265
A
VAL
1266
n
217
VAL
1266
A
TRP
1267
n
218
TRP
1267
A
SER
1268
n
219
SER
1268
A
PHE
1269
n
220
PHE
1269
A
GLY
1270
n
221
GLY
1270
A
VAL
1271
n
222
VAL
1271
A
LEU
1272
n
223
LEU
1272
A
LEU
1273
n
224
LEU
1273
A
TRP
1274
n
225
TRP
1274
A
GLU
1275
n
226
GLU
1275
A
LEU
1276
n
227
LEU
1276
A
MET
1277
n
228
MET
1277
A
THR
1278
n
229
THR
1278
A
ARG
1279
n
230
ARG
1279
A
GLY
1280
n
231
GLY
1280
A
ALA
1281
n
232
ALA
1281
A
PRO
1282
n
233
PRO
1282
A
PRO
1283
n
234
PRO
1283
A
TYR
1284
n
235
TYR
1284
A
PRO
1285
n
236
PRO
1285
A
ASP
1286
n
237
ASP
1286
A
VAL
1287
n
238
VAL
1287
A
ASN
1288
n
239
ASN
1288
A
THR
1289
n
240
THR
1289
A
PHE
1290
n
241
PHE
1290
A
ASP
1291
n
242
ASP
1291
A
ILE
1292
n
243
ILE
1292
A
THR
1293
n
244
THR
1293
A
VAL
1294
n
245
VAL
1294
A
TYR
1295
n
246
TYR
1295
A
LEU
1296
n
247
LEU
1296
A
LEU
1297
n
248
LEU
1297
A
GLN
1298
n
249
GLN
1298
A
GLY
1299
n
250
GLY
1299
A
ARG
1300
n
251
ARG
1300
A
ARG
1301
n
252
ARG
1301
A
LEU
1302
n
253
LEU
1302
A
LEU
1303
n
254
LEU
1303
A
GLN
1304
n
255
GLN
1304
A
PRO
1305
n
256
PRO
1305
A
GLU
1306
n
257
GLU
1306
A
TYR
1307
n
258
TYR
1307
A
CYS
1308
n
259
CYS
1308
A
PRO
1309
n
260
PRO
1309
A
ASP
1310
n
261
ASP
1310
A
PRO
1311
n
262
PRO
1311
A
LEU
1312
n
263
LEU
1312
A
TYR
1313
n
264
TYR
1313
A
GLU
1314
n
265
GLU
1314
A
VAL
1315
n
266
VAL
1315
A
MET
1316
n
267
MET
1316
A
LEU
1317
n
268
LEU
1317
A
LYS
1318
n
269
LYS
1318
A
CYS
1319
n
270
CYS
1319
A
TRP
1320
n
271
TRP
1320
A
HIS
1321
n
272
HIS
1321
A
PRO
1322
n
273
PRO
1322
A
LYS
1323
n
274
LYS
1323
A
ALA
1324
n
275
ALA
1324
A
GLU
1325
n
276
GLU
1325
A
MET
1326
n
277
MET
1326
A
ARG
1327
n
278
ARG
1327
A
PRO
1328
n
279
PRO
1328
A
SER
1329
n
280
SER
1329
A
PHE
1330
n
281
PHE
1330
A
SER
1331
n
282
SER
1331
A
GLU
1332
n
283
GLU
1332
A
LEU
1333
n
284
LEU
1333
A
VAL
1334
n
285
VAL
1334
A
SER
1335
n
286
SER
1335
A
ARG
1336
n
287
ARG
1336
A
ILE
1337
n
288
ILE
1337
A
SER
1338
n
289
SER
1338
A
ALA
1339
n
290
ALA
1339
A
ILE
1340
n
291
ILE
1340
A
PHE
1341
n
292
PHE
1341
A
SER
1342
n
293
SER
1342
A
THR
1343
n
294
THR
1343
A
PHE
1344
n
295
PHE
1344
A
ILE
1345
n
296
ILE
1345
A
n
297
1346
A
n
298
1347
A
n
299
1348
A
n
300
1349
A
n
301
1350
A
n
302
1351
A
n
303
1352
A
n
304
1353
A
n
305
1354
A
n
306
1355
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
1071
A
N
ILE
22
A
O
ILE
1145
A
O
ILE
96
A
N
CYS
1146
A
N
CYS
97
A
O
LEU
1154
A
O
LEU
105
A
N
LEU
1157
A
N
LEU
108
A
O
ALA
1108
A
O
ALA
59
A
N
SER
1111
A
N
SER
62
A
O
CYS
1091
A
O
CYS
42
A
N
THR
1096
A
N
THR
47
A
O
ILE
1077
A
O
ILE
28
A
N
MET
1211
A
N
MET
162
A
O
LYS
1219
A
O
LYS
170
1
A
CA
ILE
1345
A
CA
ILE
296
1
Y
1
A
C
ILE
1345
A
C
ILE
296
1
Y
1
A
O
ILE
1345
A
O
ILE
296
1
Y
1
A
CB
ILE
1345
A
CB
ILE
296
1
Y
1
A
CG1
ILE
1345
A
CG1
ILE
296
1
Y
1
A
CG2
ILE
1345
A
CG2
ILE
296
1
Y
1
A
CD1
ILE
1345
A
CD1
ILE
296
1
Y
1
A
MET
1050
A
MET
1
1
Y
1
A
VAL
1051
A
VAL
2
1
Y
1
A
ASP
1099
A
ASP
50
1
Y
1
A
ASN
1100
A
ASN
51
1
Y
1
A
ASP
1101
A
ASP
52
1
Y
1
A
GLY
1102
A
GLY
53
1
Y
1
A
GLY
1346
A
GLY
297
1
Y
1
A
GLU
1347
A
GLU
298
1
Y
1
A
HIS
1348
A
HIS
299
1
Y
1
A
HIS
1349
A
HIS
300
1
Y
1
A
HIS
1350
A
HIS
301
1
Y
1
A
HIS
1351
A
HIS
302
1
Y
1
A
HIS
1352
A
HIS
303
1
Y
1
A
HIS
1353
A
HIS
304
1
Y
1
A
HIS
1354
A
HIS
305
1
Y
1
A
HIS
1355
A
HIS
306
1
Y
1
A
GLU
1082
-117.73
78.17
1
A
ARG
1203
85.56
-13.18
1
A
ASP
1204
-149.95
44.33
1
A
ALA
1221
-135.65
-156.26
1
A
GLN
1258
78.58
-4.23
1
A
GLN
1298
-64.00
3.85
40.859
-2.06
0.00
0.00
-4.32
0.00
6.38
0.940
0.932
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.23153
0.21396
0.21485
2.00
19.96
926
17195
5.1
78.05
5.681
0.145
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.282
0.196
0.80
0.80
1.40
PDB ENTRY 3LCK
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.00
19.96
180
2519
30
0
2309
0.008
0.021
2400
1.081
1.971
3251
5.148
5.000
287
0.076
0.200
361
0.003
0.020
1784
0.193
0.200
1117
0.141
0.200
140
0.170
0.200
46
0.213
0.200
6
0.572
1.500
1441
1.086
2.000
2338
1.386
3.000
959
2.347
4.500
913
0.221
0.265
2.052
33
593
20
38.5
2.00
50.00
2WGJ
18192
1.0
0.06
1
20.00
3.9
78.1
0.29
2.00
2.05
2.50
1
2.8
38.5
refinement
REFMAC
5.1.24
data reduction
HKL-2000
data scaling
HKL-2000
phasing
EPMR
X-ray Structure of PF-02341066 bound to the kinase domain of c-Met
1
N
N
2
N
N
3
N
N
A
ASN
1059
A
ASN
10
HELX_P
A
HIS
1068
A
HIS
19
1
1
10
A
GLY
1072
A
GLY
23
HELX_P
A
SER
1074
A
SER
25
5
2
3
A
ASP
1117
A
ASP
68
HELX_P
A
ILE
1129
A
ILE
80
1
3
13
A
ILE
1130
A
ILE
81
HELX_P
A
PHE
1134
A
PHE
85
5
4
5
A
ASP
1164
A
ASP
115
HELX_P
A
ASN
1171
A
ASN
122
1
5
8
A
THR
1177
A
THR
128
HELX_P
A
LYS
1198
A
LYS
149
1
6
22
A
ALA
1206
A
ALA
157
HELX_P
A
ARG
1208
A
ARG
159
5
7
3
A
PHE
1223
A
PHE
174
HELX_P
A
ARG
1227
A
ARG
178
5
8
5
A
ASP
1231
A
ASP
182
HELX_P
A
TYR
1235
A
TYR
186
5
9
5
A
PRO
1246
A
PRO
197
HELX_P
A
MET
1250
A
MET
201
5
10
5
A
ALA
1251
A
ALA
202
HELX_P
A
GLN
1258
A
GLN
209
1
11
8
A
THR
1261
A
THR
212
HELX_P
A
THR
1278
A
THR
229
1
12
18
A
ASP
1291
A
ASP
242
HELX_P
A
GLN
1298
A
GLN
249
1
13
8
A
PRO
1309
A
PRO
260
HELX_P
A
TRP
1320
A
TRP
271
1
14
12
A
LYS
1323
A
LYS
274
HELX_P
A
ARG
1327
A
ARG
278
5
15
5
A
SER
1329
A
SER
280
HELX_P
A
THR
1343
A
THR
294
1
16
15
TRANSFERASE
C-MET, KINASE, INHIBITOR, TRANSFERASE, ATP-BINDING, NUCLEOTIDE-BINDING, TYROSINE-PROTEIN KINASE
2WGJ
PDB
1
2WGJ
MET_HUMAN
UNP
1
P08581
1050
1050
2WGJ
1050
1050
2WGJ
A
1
1
1
1051
1348
2WGJ
1051
1348
P08581
A
2
2
299
1349
1355
2WGJ
1349
1355
2WGJ
A
1
300
306
1
VAL
conflict
LEU
1272
2WGJ
A
P08581
UNP
1272
223
6
2
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
1070
A
VAL
21
A
ILE
1071
A
ILE
22
A
GLY
1144
A
GLY
95
A
CYS
1146
A
CYS
97
A
LEU
1154
A
LEU
105
A
PRO
1158
A
PRO
109
A
ILE
1105
A
ILE
56
A
SER
1111
A
SER
62
A
CYS
1091
A
CYS
42
A
LEU
1097
A
LEU
48
A
LEU
1076
A
LEU
27
A
ARG
1086
A
ARG
37
A
CYS
1210
A
CYS
161
A
LEU
1212
A
LEU
163
A
VAL
1218
A
VAL
169
A
VAL
1220
A
VAL
171
BINDING SITE FOR RESIDUE VGH A 2346
A
VGH
2346
Software
13
A
ILE
1084
A
ILE
35
13
1_555
A
GLY
1085
A
GLY
36
13
1_555
A
ALA
1108
A
ALA
59
13
1_555
A
LEU
1157
A
LEU
108
13
1_555
A
PRO
1158
A
PRO
109
13
1_555
A
TYR
1159
A
TYR
110
13
1_555
A
MET
1160
A
MET
111
13
1_555
A
GLY
1163
A
GLY
114
13
1_555
A
ARG
1208
A
ARG
159
13
1_555
A
MET
1211
A
MET
162
13
1_555
A
ALA
1221
A
ALA
172
13
1_555
A
ASP
1222
A
ASP
173
13
1_555
A
TYR
1230
A
TYR
181
13
1_555
18
P 21 21 2