0.017674 0.000000 0.000000 0.000000 0.017674 0.000000 0.000000 0.000000 0.017674 0.00000 0.00000 0.00000 Hartmann, M.D. Hernandez Alvarez, B. Lupas, A.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 56.580 56.580 56.580 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Br -1 79.904 BROMIDE ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 106 16950 10.1073/PNAS.0907256106 19805097 A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. 2009 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.9184 1.0 X10SA SLS 0.9184 SYNCHROTRON SLS BEAMLINE X10SA 3967.468 GENERAL CONTROL PROTEIN GCN4 COILED-COIL DOMAIN, RESIDUES 249-281 YES 1 syn polymer 79.904 BROMIDE ION 3 syn non-polymer 18.015 water 70 nat water AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN, GCN4 LEUCINE ZIPPER MUTANT no no RMKQLEDKIEENTSKIYHNTNEIARNTKLVGER RMKQLEDKIEENTSKIYHNTNEIARNTKLVGER A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2 39 NONE 20% (W/V) PEG 3350, 200 MM NABR, 100 MM BIS-TRIS PROPANE PH 8.5 repository Initial release Version format compliance Version format compliance 1 0 2009-11-03 1 1 2011-05-08 1 2 2011-07-13 ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TRIGONAL FORM GCN4 LEUCINE ZIPPER CORE MUTANT P-LI STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA GCN4 LEUCINE ZIPPER STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES ANTIPARALLEL CONFIGURATION OF PLI E20S HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS FUSED TO GCN4, P61A MUTANT TMZIP: A CHIMERIC PEPTIDE MODEL OF THE N- TERMINUS OF ALPHA TROPOMYOSIN, NMR, 15 STRUCTURES GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE DIMERIC STATE PLI E20C IS ANTIPARALLEL AN ANTI-PARALLEL TO PARALLEL SWITCH. ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL FORM GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE TRIMERIC STATE STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES AN ANTI-PARALLEL FOUR HELIX BUNDLE CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4-LEUCINE ZIPPER CORE MUTANT ASN16LYS IN THE DIMERIC STATE GCN4 (BASIC REGION, LEUCINE ZIPPER) COMPLEX WITH AP-1 DEOXYRIBONUCLEIC ACID AN ANTI-PARALLEL FOUR HELIX BUNDLE. GCN4-PVTL COILED-COIL TRIMER WITH THREONINE AT THE A(16)POSITION STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES PARALLEL CONFIGURATION OF PLI E20S COILED COIL TRIMER GCN4-PVLS SER AT BURIED D POSITION AN ANTI-PARALLEL FOUR HELIX BUNDLE ( ACETIMIDE MODIFICATION). STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES ANTIPARALLEL FOUR-STRANDED COILED COIL SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REPEAT PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS ANTIPARALLEL FOUR-STRANDED COILED COIL SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REPEAT STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS FUSED TO GCN4 STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A COMPLEXED WITH BENZENE ABA DOES NOT AFFECT TOPOLOGY OF PLI. GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DEOXYRIBONUCLEIC ACID VISUALIZING AN UNSTABLE COILED COIL: THE CRYSTAL STRUCTUREOF AN N-TERMINAL SEGMENT OF THE SCALLOP MYOSIN ROD CRYSTAL STRUCTURE OF THE C-TERMINAL FRAGMENT OF RABBITSKELETAL ALPHA-TROPOMYOSIN GCN4 LEUCINE ZIPPER CORE MUTANT P-LI GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE DIMERIC STATE CRYSTAL STRUCTURE OF THE C-TERMINAL REGION OF STRIATEDMUSCLE ALPHA-TROPOMYOSIN AT 2.7 ANGSTROM RESOLUTION STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL AUTOMATIC SOLUTION GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE N-TERMINUS OF ARAT SHORT ALPHA TROPOMYOSIN WITH THE N-TERMINUS ENCODED BYEXON 1B STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4-PVSL COILED-COIL TRIMER WITH SERINE AT THE A(16)POSITION LEUCINE ZIPPER MONOMER (NMR, 20 STRUCTURES) AN ANTI-PARALLEL FOUR HELIX BUNDLE GCN4-PVLT COILED-COIL TRIMER WITH THREONINE AT THE D(12)POSITION GCN4 LEUCINE ZIPPER COMPLEXED WITH SPECIFIC ATF/CREB SITE DEOXYRIBONUCLEIC ACID GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TRIGONAL AUTOMATICSOLUTION GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE TRIMERIC STATE CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A CROSS-LINKED INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 HYDROPHOBIC POCKET PLI MUTANT E20C L16G Y17H, ANTIPARALLEL SALMONELLA ENTERICA SADA 483-523 FUSED TO GCN4 ADAPTORS (SADAK3B-V2, OUT-OF-REGISTER FUSION) GCN4 LEUCINE ZIPPER MUTANT WITH TWO VXXNXXX MOTIFS COORDINATING CHLORIDE GCN4 LEUCINE ZIPPER MUTANT WITH ONE VXXNXXX MOTIF COORDINATING CHLORIDE GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING CHLORIDE GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING CHLORIDE AND NITRATE SALMONELLA ENTERICA SADA 479-519 FUSED TO GCN4 ADAPTORS (SADAK3, IN-REGISTER FUSION) GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING IODIDE SALMONELLA ENTERICA SADA 483-523 FUSED TO GCN4 ADAPTORS (SADAK3B-V1, OUT-OF-REGISTER FUSION) PDBE Y PDBE 2009-08-12 REL 1 A O HOH 2001 5.83 BR BROMIDE ION HOH water 4932 BAKER'S YEAST SACCHAROMYCES CEREVISIAE sample ENGINEERED RESIDUE IN CHAIN A, VAL 257 TO ILE ENGINEERED RESIDUE IN CHAIN A, LEU 260 TO ASN ENGINEERED RESIDUE IN CHAIN A, LEU 261 TO THR ENGINEERED RESIDUE IN CHAIN A, ASN 264 TO ILE ENGINEERED RESIDUE IN CHAIN A, LEU 267 TO ASN ENGINEERED RESIDUE IN CHAIN A, GLU 268 TO THR ENGINEERED RESIDUE IN CHAIN A, VAL 271 TO ILE ENGINEERED RESIDUE IN CHAIN A, LEU 274 TO ASN ENGINEERED RESIDUE IN CHAIN A, LYS 275 TO THR BR 1033 2 BR BR 1033 A BR 1034 2 BR BR 1034 A BR 1035 2 BR BR 1035 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2062 3 HOH HOH 2062 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2066 3 HOH HOH 2066 A HOH 2067 3 HOH HOH 2067 A HOH 2068 3 HOH HOH 2068 A HOH 2069 3 HOH HOH 2069 A HOH 2070 3 HOH HOH 2070 A ARG 1 n 1 ARG 1 A MET 2 n 2 MET 2 A LYS 3 n 3 LYS 3 A GLN 4 n 4 GLN 4 A LEU 5 n 5 LEU 5 A GLU 6 n 6 GLU 6 A ASP 7 n 7 ASP 7 A LYS 8 n 8 LYS 8 A ILE 9 n 9 ILE 9 A GLU 10 n 10 GLU 10 A GLU 11 n 11 GLU 11 A ASN 12 n 12 ASN 12 A THR 13 n 13 THR 13 A SER 14 n 14 SER 14 A LYS 15 n 15 LYS 15 A ILE 16 n 16 ILE 16 A TYR 17 n 17 TYR 17 A HIS 18 n 18 HIS 18 A ASN 19 n 19 ASN 19 A THR 20 n 20 THR 20 A ASN 21 n 21 ASN 21 A GLU 22 n 22 GLU 22 A ILE 23 n 23 ILE 23 A ALA 24 n 24 ALA 24 A ARG 25 n 25 ARG 25 A ASN 26 n 26 ASN 26 A THR 27 n 27 THR 27 A LYS 28 n 28 LYS 28 A LEU 29 n 29 LEU 29 A VAL 30 n 30 VAL 30 A GLY 31 n 31 GLY 31 A GLU 32 n 32 GLU 32 A n 33 33 A author_and_software_defined_assembly PISA 3 trimeric 3480 -31.49 6650 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 9_555 y,z,x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5_555 z,x,y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1 A BR 1033 B BR 1 A BR 1034 C BR 1 A BR 1035 D BR 1 A HOH 2010 E HOH 1 A HOH 2031 E HOH 1 A CG ARG 1 A CG ARG 1 1 Y 1 A CD ARG 1 A CD ARG 1 1 Y 1 A NE ARG 1 A NE ARG 1 1 Y 1 A CZ ARG 1 A CZ ARG 1 1 Y 1 A NH1 ARG 1 A NH1 ARG 1 1 Y 1 A NH2 ARG 1 A NH2 ARG 1 1 Y 1 A CD LYS 3 A CD LYS 3 1 Y 1 A CE LYS 3 A CE LYS 3 1 Y 1 A NZ LYS 3 A NZ LYS 3 1 Y 1 A ARG 33 A ARG 33 1 Y 11.580 0.977 0.959 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 0.16748 0.12741 0.12938 1.08 16.33 657 12350 5.1 99.85 0.913 0.021 RANDOM 1 THROUGHOUT SAD 0.032 0.035 0.80 0.80 1.20 NONE MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.08 16.33 70 329 3 0 256 0.019 0.021 366 0.003 0.020 247 1.834 1.968 495 1.259 3.000 620 4.897 5.000 45 36.995 28.095 21 14.385 15.000 84 11.299 15.000 1 0.137 0.200 58 0.008 0.020 402 0.003 0.020 55 0.385 0.200 83 0.211 0.200 220 0.184 0.200 126 0.092 0.200 174 0.170 0.200 40 0.091 0.200 16 0.281 0.200 30 0.191 0.200 15 5.237 24.000 254 3.975 24.000 91 5.732 32.000 369 6.889 48.000 145 8.820 72.000 125 2.924 3.000 658 8.898 3.000 73 6.026 3.000 608 0.258 0.203 1.110 48 921 20 100.00 12.0 1.08 18.00 2WQ1 13026 0.0 0.08 1 10.00 4.11 99.5 0.66 1.08 1.15 2.01 1 3.97 98.8 refinement REFMAC 5.2.0019 data reduction XDS data scaling XSCALE phasing SHELX GENERAL CONTROL PROTEIN GCN4 GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating bromide 1 N N 2 N N 2 N N 2 N N 3 N N A ARG 1 A ARG 1 HELX_P A VAL 30 A VAL 30 1 1 30 TRANSCRIPTION TAA, NUCLEUS, COILED COIL, DNA-BINDING, PROTEIN EXPORT, ION COORDINATION, POLAR CORE RESIDUES, TRIMERIC AUTOTRANSPORTER ADHESIN, TRANSCRIPTION GCN4_YEAST UNP 1 P03069 249 281 2WQ1 1 33 P03069 A 1 1 33 1 VAL engineered mutation ILE 9 2WQ1 A P03069 UNP 257 9 1 LEU engineered mutation ASN 12 2WQ1 A P03069 UNP 260 12 1 LEU engineered mutation THR 13 2WQ1 A P03069 UNP 261 13 1 ASN engineered mutation ILE 16 2WQ1 A P03069 UNP 264 16 1 LEU engineered mutation ASN 19 2WQ1 A P03069 UNP 267 19 1 GLU engineered mutation THR 20 2WQ1 A P03069 UNP 268 20 1 VAL engineered mutation ILE 23 2WQ1 A P03069 UNP 271 23 1 LEU engineered mutation ASN 26 2WQ1 A P03069 UNP 274 26 1 LYS engineered mutation THR 27 2WQ1 A P03069 UNP 275 27 BINDING SITE FOR RESIDUE BR A 1033 Software 3 BINDING SITE FOR RESIDUE BR A 1034 Software 3 BINDING SITE FOR RESIDUE BR A 1035 Software 3 A ASN 12 A ASN 12 3 1_555 A ASN 12 A ASN 12 3 5_555 A ASN 12 A ASN 12 3 9_555 A ASN 19 A ASN 19 3 1_555 A ASN 19 A ASN 19 3 9_555 A ASN 19 A ASN 19 3 5_555 A ASN 26 A ASN 26 3 5_555 A ASN 26 A ASN 26 3 1_555 A ASN 26 A ASN 26 3 9_555 199 I 21 3