0.017749
0.000000
0.000000
0.000000
0.017749
0.000000
0.000000
0.000000
0.017749
0.00000
0.00000
0.00000
Hartmann, M.D.
Hernandez Alvarez, B.
Lupas, A.N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
56.340
56.340
56.340
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
I -1
126.904
IODIDE ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
106
16950
10.1073/PNAS.0907256106
19805097
A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core.
2009
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
X10SA
SLS
1.0
SYNCHROTRON
SLS BEAMLINE X10SA
3967.468
GENERAL CONTROL PROTEIN GCN4
COILED-COIL DOMAIN, RESIDUES 249-281
YES
1
syn
polymer
126.904
IODIDE ION
3
syn
non-polymer
18.015
water
58
nat
water
GCN4 LEUCINE ZIPPER MUTANT, AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN
no
no
RMKQLEDKIEENTSKIYHNTNEIARNTKLVGER
RMKQLEDKIEENTSKIYHNTNEIARNTKLVGER
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
2
39
NONE
2.4 M (NH4)2HPO4, 100 MM TRIS PH 8.5
repository
Initial release
Version format compliance
Version format compliance
1
0
2009-11-03
1
1
2011-05-08
1
2
2011-07-13
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TRIGONAL FORM
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA
GCN4 LEUCINE ZIPPER
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
ANTIPARALLEL CONFIGURATION OF PLI E20S
HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER
PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS FUSED TO GCN4, P61A MUTANT
TMZIP: A CHIMERIC PEPTIDE MODEL OF THE N- TERMINUS OF ALPHA TROPOMYOSIN, NMR, 15 STRUCTURES
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE DIMERIC STATE
PLI E20C IS ANTIPARALLEL
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL FORM
AN ANTI-PARALLEL TO PARALLEL SWITCH.
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE TRIMERIC STATE
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
AN ANTI-PARALLEL FOUR HELIX BUNDLE
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16LYS IN THE DIMERIC STATE
GCN4 (BASIC REGION, LEUCINE ZIPPER) COMPLEX WITH AP-1 DEOXYRIBONUCLEIC ACID
AN ANTI-PARALLEL FOUR HELIX BUNDLE.
GCN4-PVTL COILED-COIL TRIMER WITH THREONINE AT THE A(16)POSITION
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
PARALLEL CONFIGURATION OF PLI E20S
COILED COIL TRIMER GCN4-PVLS SER AT BURIED D POSITION
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
AN ANTI-PARALLEL FOUR HELIX BUNDLE ( ACETIMIDE MODIFICATION).
ANTIPARALLEL FOUR-STRANDED COILED COIL SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REPEAT
PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS
ANTIPARALLEL FOUR-STRANDED COILED COIL SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REPEAT
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS FUSED TO GCN4
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A COMPLEXED WITH BENZENE
ABA DOES NOT AFFECT TOPOLOGY OF PLI.
GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DEOXYRIBONUCLEIC ACID
VISUALIZING AN UNSTABLE COILED COIL: THE CRYSTAL STRUCTUREOF AN N-TERMINAL SEGMENT OF THE SCALLOP MYOSIN ROD
CRYSTAL STRUCTURE OF THE C-TERMINAL FRAGMENT OF RABBITSKELETAL ALPHA-TROPOMYOSIN
CRYSTAL STRUCTURE OF THE C-TERMINAL REGION OF STRIATEDMUSCLE ALPHA-TROPOMYOSIN AT 2.7 ANGSTROM RESOLUTION
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE DIMERIC STATE
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL AUTOMATIC SOLUTION
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE N-TERMINUS OF ARAT SHORT ALPHA TROPOMYOSIN WITH THE N-TERMINUS ENCODED BYEXON 1B
LEUCINE ZIPPER MONOMER (NMR, 20 STRUCTURES)
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
GCN4-PVSL COILED-COIL TRIMER WITH SERINE AT THE A(16)POSITION
AN ANTI-PARALLEL FOUR HELIX BUNDLE
GCN4-PVLT COILED-COIL TRIMER WITH THREONINE AT THE D(12)POSITION
GCN4 LEUCINE ZIPPER COMPLEXED WITH SPECIFIC ATF/CREB SITE DEOXYRIBONUCLEIC ACID
GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TRIGONAL AUTOMATICSOLUTION
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE TRIMERIC STATE
PLI MUTANT E20C L16G Y17H, ANTIPARALLEL
CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A CROSS-LINKED INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 HYDROPHOBIC POCKET
SALMONELLA ENTERICA SADA 483-523 FUSED TO GCN4 ADAPTORS (SADAK3B-V2, OUT-OF-REGISTER FUSION)
GCN4 LEUCINE ZIPPER MUTANT WITH TWO VXXNXXX MOTIFS COORDINATING CHLORIDE
GCN4 LEUCINE ZIPPER MUTANT WITH ONE VXXNXXX MOTIF COORDINATING CHLORIDE
GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING CHLORIDE
GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING CHLORIDE AND NITRATE
SALMONELLA ENTERICA SADA 479-519 FUSED TO GCN4 ADAPTORS (SADAK3, IN-REGISTER FUSION)
GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING BROMIDE
GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING IODIDE
SALMONELLA ENTERICA SADA 483-523 FUSED TO GCN4 ADAPTORS (SADAK3B-V1, OUT-OF-REGISTER FUSION)
PDBE
Y
PDBE
2009-08-12
REL
IOD
IODIDE ION
HOH
water
4932
BAKER'S YEAST
SACCHAROMYCES CEREVISIAE
sample
ENGINEERED RESIDUE IN CHAIN A, VAL 257 TO ILE
ENGINEERED RESIDUE IN CHAIN A, LEU 260 TO ASN
ENGINEERED RESIDUE IN CHAIN A, LEU 261 TO THR
ENGINEERED RESIDUE IN CHAIN A, ASN 264 TO ILE
ENGINEERED RESIDUE IN CHAIN A, LEU 267 TO ASN
ENGINEERED RESIDUE IN CHAIN A, GLU 268 TO THR
ENGINEERED RESIDUE IN CHAIN A, VAL 271 TO ILE
ENGINEERED RESIDUE IN CHAIN A, LEU 274 TO ASN
ENGINEERED RESIDUE IN CHAIN A, LYS 275 TO THR
IOD
1001
2
IOD
IOD
1001
A
IOD
1002
2
IOD
IOD
1002
A
IOD
1003
2
IOD
IOD
1003
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2045
3
HOH
HOH
2045
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2047
3
HOH
HOH
2047
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2051
3
HOH
HOH
2051
A
HOH
2052
3
HOH
HOH
2052
A
HOH
2053
3
HOH
HOH
2053
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2055
3
HOH
HOH
2055
A
HOH
2056
3
HOH
HOH
2056
A
HOH
2057
3
HOH
HOH
2057
A
HOH
2058
3
HOH
HOH
2058
A
n
1
1
A
MET
2
n
2
MET
2
A
LYS
3
n
3
LYS
3
A
GLN
4
n
4
GLN
4
A
LEU
5
n
5
LEU
5
A
GLU
6
n
6
GLU
6
A
ASP
7
n
7
ASP
7
A
LYS
8
n
8
LYS
8
A
ILE
9
n
9
ILE
9
A
GLU
10
n
10
GLU
10
A
GLU
11
n
11
GLU
11
A
ASN
12
n
12
ASN
12
A
THR
13
n
13
THR
13
A
SER
14
n
14
SER
14
A
LYS
15
n
15
LYS
15
A
ILE
16
n
16
ILE
16
A
TYR
17
n
17
TYR
17
A
HIS
18
n
18
HIS
18
A
ASN
19
n
19
ASN
19
A
THR
20
n
20
THR
20
A
ASN
21
n
21
ASN
21
A
GLU
22
n
22
GLU
22
A
ILE
23
n
23
ILE
23
A
ALA
24
n
24
ALA
24
A
ARG
25
n
25
ARG
25
A
ASN
26
n
26
ASN
26
A
THR
27
n
27
THR
27
A
LYS
28
n
28
LYS
28
A
LEU
29
n
29
LEU
29
A
VAL
30
n
30
VAL
30
A
GLY
31
n
31
GLY
31
A
n
32
32
A
n
33
33
A
author_and_software_defined_assembly
PISA
3
trimeric
2790
-23.42
6600
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
9_555
y,z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
5_555
z,x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
IOD
1001
B
IOD
1
A
IOD
1002
C
IOD
1
A
IOD
1003
D
IOD
1
A
HOH
2020
E
HOH
1
A
CG
MET
2
A
CG
MET
2
1
Y
1
A
SD
MET
2
A
SD
MET
2
1
Y
1
A
CE
MET
2
A
CE
MET
2
1
Y
1
A
NZ
LYS
3
A
NZ
LYS
3
1
Y
1
A
ARG
1
A
ARG
1
1
Y
1
A
GLU
32
A
GLU
32
1
Y
1
A
ARG
33
A
ARG
33
1
Y
16.774
0.976
0.963
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.18378
0.14154
0.14359
1.36
17.85
331
6254
5.0
99.67
2.187
0.040
RANDOM
1
THROUGHOUT
SAD
0.058
0.056
0.80
0.80
1.40
NONE
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.36
17.85
58
302
3
0
241
0.008
0.022
249
0.002
0.020
168
0.876
1.948
334
0.859
3.000
419
4.426
5.000
29
31.842
27.143
14
13.091
15.000
53
2.869
15.000
1
0.045
0.200
40
0.003
0.020
266
0.000
0.020
39
3.155
24.000
150
1.751
24.000
60
4.541
32.000
245
5.215
48.000
99
7.692
72.000
89
2.067
3.000
417
2.768
3.000
61
2.552
3.000
416
0.282
0.202
1.390
24
439
20
100.00
23.3
1.35
18.00
2WQ2
6605
0.0
0.03
1
16.30
2.83
99.4
0.50
1.35
1.44
2.08
1
2.76
99.7
refinement
REFMAC
5.5.0072
data reduction
XDS
data scaling
XSCALE
phasing
SHELX
GENERAL CONTROL PROTEIN GCN4
GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating iodide
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
MET
2
A
MET
2
HELX_P
A
VAL
30
A
VAL
30
1
1
29
TRANSCRIPTION
TRANSCRIPTION, TAA, NUCLEUS, COILED COIL, DNA-BINDING, PROTEIN EXPORT, ION COORDINATION, POLAR CORE RESIDUES, TRIMERIC AUTOTRANSPORTER ADHESIN, TRANSCRIPTION REGULATION, ACTIVATOR
GCN4_YEAST
UNP
1
P03069
249
281
2WQ2
1
33
P03069
A
1
1
33
1
VAL
engineered mutation
ILE
9
2WQ2
A
P03069
UNP
257
9
1
LEU
engineered mutation
ASN
12
2WQ2
A
P03069
UNP
260
12
1
LEU
engineered mutation
THR
13
2WQ2
A
P03069
UNP
261
13
1
ASN
engineered mutation
ILE
16
2WQ2
A
P03069
UNP
264
16
1
LEU
engineered mutation
ASN
19
2WQ2
A
P03069
UNP
267
19
1
GLU
engineered mutation
THR
20
2WQ2
A
P03069
UNP
268
20
1
VAL
engineered mutation
ILE
23
2WQ2
A
P03069
UNP
271
23
1
LEU
engineered mutation
ASN
26
2WQ2
A
P03069
UNP
274
26
1
LYS
engineered mutation
THR
27
2WQ2
A
P03069
UNP
275
27
BINDING SITE FOR RESIDUE IOD A 1001
Software
3
BINDING SITE FOR RESIDUE IOD A 1002
Software
3
BINDING SITE FOR RESIDUE IOD A 1003
Software
3
A
ASN
12
A
ASN
12
3
1_555
A
ASN
12
A
ASN
12
3
9_555
A
ASN
12
A
ASN
12
3
5_555
A
ASN
19
A
ASN
19
3
1_555
A
ASN
19
A
ASN
19
3
9_555
A
ASN
19
A
ASN
19
3
5_555
A
ASN
26
A
ASN
26
3
1_555
A
ASN
26
A
ASN
26
3
9_555
A
ASN
26
A
ASN
26
3
5_555
199
I 21 3