0.017749 0.000000 0.000000 0.000000 0.017749 0.000000 0.000000 0.000000 0.017749 0.00000 0.00000 0.00000 Hartmann, M.D. Hernandez Alvarez, B. Lupas, A.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 56.340 56.340 56.340 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking I -1 126.904 IODIDE ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 106 16950 10.1073/PNAS.0907256106 19805097 A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. 2009 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.0 1.0 X10SA SLS 1.0 SYNCHROTRON SLS BEAMLINE X10SA 3967.468 GENERAL CONTROL PROTEIN GCN4 COILED-COIL DOMAIN, RESIDUES 249-281 YES 1 syn polymer 126.904 IODIDE ION 3 syn non-polymer 18.015 water 58 nat water GCN4 LEUCINE ZIPPER MUTANT, AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN no no RMKQLEDKIEENTSKIYHNTNEIARNTKLVGER RMKQLEDKIEENTSKIYHNTNEIARNTKLVGER A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2 39 NONE 2.4 M (NH4)2HPO4, 100 MM TRIS PH 8.5 repository Initial release Version format compliance Version format compliance 1 0 2009-11-03 1 1 2011-05-08 1 2 2011-07-13 ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TRIGONAL FORM STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4 LEUCINE ZIPPER CORE MUTANT P-LI CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA GCN4 LEUCINE ZIPPER STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES ANTIPARALLEL CONFIGURATION OF PLI E20S HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS FUSED TO GCN4, P61A MUTANT TMZIP: A CHIMERIC PEPTIDE MODEL OF THE N- TERMINUS OF ALPHA TROPOMYOSIN, NMR, 15 STRUCTURES GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE DIMERIC STATE PLI E20C IS ANTIPARALLEL ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL FORM AN ANTI-PARALLEL TO PARALLEL SWITCH. GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE TRIMERIC STATE STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES AN ANTI-PARALLEL FOUR HELIX BUNDLE STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4-LEUCINE ZIPPER CORE MUTANT ASN16LYS IN THE DIMERIC STATE GCN4 (BASIC REGION, LEUCINE ZIPPER) COMPLEX WITH AP-1 DEOXYRIBONUCLEIC ACID AN ANTI-PARALLEL FOUR HELIX BUNDLE. GCN4-PVTL COILED-COIL TRIMER WITH THREONINE AT THE A(16)POSITION STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES PARALLEL CONFIGURATION OF PLI E20S COILED COIL TRIMER GCN4-PVLS SER AT BURIED D POSITION STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES AN ANTI-PARALLEL FOUR HELIX BUNDLE ( ACETIMIDE MODIFICATION). ANTIPARALLEL FOUR-STRANDED COILED COIL SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REPEAT PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS ANTIPARALLEL FOUR-STRANDED COILED COIL SPECIFIED BY A 3-3-1HYDROPHOBIC HEPTAD REPEAT STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES PROTEASOME-ACTIVATING NUCLEOTIDASE (PAN) N- DOMAIN (57-134) FROM ARCHAEOGLOBUS FULGIDUS FUSED TO GCN4 STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A COMPLEXED WITH BENZENE ABA DOES NOT AFFECT TOPOLOGY OF PLI. GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DEOXYRIBONUCLEIC ACID VISUALIZING AN UNSTABLE COILED COIL: THE CRYSTAL STRUCTUREOF AN N-TERMINAL SEGMENT OF THE SCALLOP MYOSIN ROD CRYSTAL STRUCTURE OF THE C-TERMINAL FRAGMENT OF RABBITSKELETAL ALPHA-TROPOMYOSIN CRYSTAL STRUCTURE OF THE C-TERMINAL REGION OF STRIATEDMUSCLE ALPHA-TROPOMYOSIN AT 2.7 ANGSTROM RESOLUTION GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE DIMERIC STATE GCN4 LEUCINE ZIPPER CORE MUTANT P-LI ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL AUTOMATIC SOLUTION STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE N-TERMINUS OF ARAT SHORT ALPHA TROPOMYOSIN WITH THE N-TERMINUS ENCODED BYEXON 1B LEUCINE ZIPPER MONOMER (NMR, 20 STRUCTURES) STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES GCN4-PVSL COILED-COIL TRIMER WITH SERINE AT THE A(16)POSITION AN ANTI-PARALLEL FOUR HELIX BUNDLE GCN4-PVLT COILED-COIL TRIMER WITH THREONINE AT THE D(12)POSITION GCN4 LEUCINE ZIPPER COMPLEXED WITH SPECIFIC ATF/CREB SITE DEOXYRIBONUCLEIC ACID GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TRIGONAL AUTOMATICSOLUTION GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE TRIMERIC STATE PLI MUTANT E20C L16G Y17H, ANTIPARALLEL CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A CROSS-LINKED INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 HYDROPHOBIC POCKET SALMONELLA ENTERICA SADA 483-523 FUSED TO GCN4 ADAPTORS (SADAK3B-V2, OUT-OF-REGISTER FUSION) GCN4 LEUCINE ZIPPER MUTANT WITH TWO VXXNXXX MOTIFS COORDINATING CHLORIDE GCN4 LEUCINE ZIPPER MUTANT WITH ONE VXXNXXX MOTIF COORDINATING CHLORIDE GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING CHLORIDE GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING CHLORIDE AND NITRATE SALMONELLA ENTERICA SADA 479-519 FUSED TO GCN4 ADAPTORS (SADAK3, IN-REGISTER FUSION) GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING BROMIDE GCN4 LEUCINE ZIPPER MUTANT WITH THREE IXXNTXX MOTIFS COORDINATING IODIDE SALMONELLA ENTERICA SADA 483-523 FUSED TO GCN4 ADAPTORS (SADAK3B-V1, OUT-OF-REGISTER FUSION) PDBE Y PDBE 2009-08-12 REL IOD IODIDE ION HOH water 4932 BAKER'S YEAST SACCHAROMYCES CEREVISIAE sample ENGINEERED RESIDUE IN CHAIN A, VAL 257 TO ILE ENGINEERED RESIDUE IN CHAIN A, LEU 260 TO ASN ENGINEERED RESIDUE IN CHAIN A, LEU 261 TO THR ENGINEERED RESIDUE IN CHAIN A, ASN 264 TO ILE ENGINEERED RESIDUE IN CHAIN A, LEU 267 TO ASN ENGINEERED RESIDUE IN CHAIN A, GLU 268 TO THR ENGINEERED RESIDUE IN CHAIN A, VAL 271 TO ILE ENGINEERED RESIDUE IN CHAIN A, LEU 274 TO ASN ENGINEERED RESIDUE IN CHAIN A, LYS 275 TO THR IOD 1001 2 IOD IOD 1001 A IOD 1002 2 IOD IOD 1002 A IOD 1003 2 IOD IOD 1003 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A n 1 1 A MET 2 n 2 MET 2 A LYS 3 n 3 LYS 3 A GLN 4 n 4 GLN 4 A LEU 5 n 5 LEU 5 A GLU 6 n 6 GLU 6 A ASP 7 n 7 ASP 7 A LYS 8 n 8 LYS 8 A ILE 9 n 9 ILE 9 A GLU 10 n 10 GLU 10 A GLU 11 n 11 GLU 11 A ASN 12 n 12 ASN 12 A THR 13 n 13 THR 13 A SER 14 n 14 SER 14 A LYS 15 n 15 LYS 15 A ILE 16 n 16 ILE 16 A TYR 17 n 17 TYR 17 A HIS 18 n 18 HIS 18 A ASN 19 n 19 ASN 19 A THR 20 n 20 THR 20 A ASN 21 n 21 ASN 21 A GLU 22 n 22 GLU 22 A ILE 23 n 23 ILE 23 A ALA 24 n 24 ALA 24 A ARG 25 n 25 ARG 25 A ASN 26 n 26 ASN 26 A THR 27 n 27 THR 27 A LYS 28 n 28 LYS 28 A LEU 29 n 29 LEU 29 A VAL 30 n 30 VAL 30 A GLY 31 n 31 GLY 31 A n 32 32 A n 33 33 A author_and_software_defined_assembly PISA 3 trimeric 2790 -23.42 6600 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 9_555 y,z,x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5_555 z,x,y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1 A IOD 1001 B IOD 1 A IOD 1002 C IOD 1 A IOD 1003 D IOD 1 A HOH 2020 E HOH 1 A CG MET 2 A CG MET 2 1 Y 1 A SD MET 2 A SD MET 2 1 Y 1 A CE MET 2 A CE MET 2 1 Y 1 A NZ LYS 3 A NZ LYS 3 1 Y 1 A ARG 1 A ARG 1 1 Y 1 A GLU 32 A GLU 32 1 Y 1 A ARG 33 A ARG 33 1 Y 16.774 0.976 0.963 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 0.18378 0.14154 0.14359 1.36 17.85 331 6254 5.0 99.67 2.187 0.040 RANDOM 1 THROUGHOUT SAD 0.058 0.056 0.80 0.80 1.40 NONE MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.36 17.85 58 302 3 0 241 0.008 0.022 249 0.002 0.020 168 0.876 1.948 334 0.859 3.000 419 4.426 5.000 29 31.842 27.143 14 13.091 15.000 53 2.869 15.000 1 0.045 0.200 40 0.003 0.020 266 0.000 0.020 39 3.155 24.000 150 1.751 24.000 60 4.541 32.000 245 5.215 48.000 99 7.692 72.000 89 2.067 3.000 417 2.768 3.000 61 2.552 3.000 416 0.282 0.202 1.390 24 439 20 100.00 23.3 1.35 18.00 2WQ2 6605 0.0 0.03 1 16.30 2.83 99.4 0.50 1.35 1.44 2.08 1 2.76 99.7 refinement REFMAC 5.5.0072 data reduction XDS data scaling XSCALE phasing SHELX GENERAL CONTROL PROTEIN GCN4 GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating iodide 1 N N 2 N N 2 N N 2 N N 3 N N A MET 2 A MET 2 HELX_P A VAL 30 A VAL 30 1 1 29 TRANSCRIPTION TRANSCRIPTION, TAA, NUCLEUS, COILED COIL, DNA-BINDING, PROTEIN EXPORT, ION COORDINATION, POLAR CORE RESIDUES, TRIMERIC AUTOTRANSPORTER ADHESIN, TRANSCRIPTION REGULATION, ACTIVATOR GCN4_YEAST UNP 1 P03069 249 281 2WQ2 1 33 P03069 A 1 1 33 1 VAL engineered mutation ILE 9 2WQ2 A P03069 UNP 257 9 1 LEU engineered mutation ASN 12 2WQ2 A P03069 UNP 260 12 1 LEU engineered mutation THR 13 2WQ2 A P03069 UNP 261 13 1 ASN engineered mutation ILE 16 2WQ2 A P03069 UNP 264 16 1 LEU engineered mutation ASN 19 2WQ2 A P03069 UNP 267 19 1 GLU engineered mutation THR 20 2WQ2 A P03069 UNP 268 20 1 VAL engineered mutation ILE 23 2WQ2 A P03069 UNP 271 23 1 LEU engineered mutation ASN 26 2WQ2 A P03069 UNP 274 26 1 LYS engineered mutation THR 27 2WQ2 A P03069 UNP 275 27 BINDING SITE FOR RESIDUE IOD A 1001 Software 3 BINDING SITE FOR RESIDUE IOD A 1002 Software 3 BINDING SITE FOR RESIDUE IOD A 1003 Software 3 A ASN 12 A ASN 12 3 1_555 A ASN 12 A ASN 12 3 9_555 A ASN 12 A ASN 12 3 5_555 A ASN 19 A ASN 19 3 1_555 A ASN 19 A ASN 19 3 9_555 A ASN 19 A ASN 19 3 5_555 A ASN 26 A ASN 26 3 1_555 A ASN 26 A ASN 26 3 9_555 A ASN 26 A ASN 26 3 5_555 199 I 21 3