0.012444
0.000000
0.000000
0.000000
0.006762
0.000000
0.000000
0.000000
0.006832
0.00000
0.00000
0.00000
Ganesan, R.
Eigenbrot, C.
Shia, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
80.359
147.889
146.371
C H3 Cl
50.488
chloromethane
Chloro Methyl group
non-polymer
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H17 N4 O2 1
177.225
n
amino{[(4S)-4-amino-5,5-dihydroxypentyl]amino}methaniminium
peptide-like
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
CL
N
3
N
H
N
4
N
H
N
5
N
H
N
6
N
C
N
7
N
O
N
8
N
C
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
N
N
14
S
C
N
15
N
C
N
16
N
O
N
17
N
C
N
18
N
O
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
N
N
27
S
C
N
28
N
C
N
29
N
O
N
30
N
C
N
31
N
C
N
32
N
C
N
33
N
N
N
34
N
C
N
35
N
N
N
36
N
N
N
37
N
O
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
N
N
56
S
C
N
57
N
C
N
58
N
O
N
59
N
C
N
60
N
C
N
61
N
C
N
62
N
N
N
63
N
C
N
64
N
N
N
65
N
N
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
N
N
100
S
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
O
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
R
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
S
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
N
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
O
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
N
N
179
S
C
N
180
N
C
N
181
N
O
N
182
N
C
Y
183
N
C
Y
184
N
N
Y
185
N
C
Y
186
N
C
Y
187
N
N
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
S
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
N
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
N
276
N
C
N
277
N
S
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
R
C
N
292
R
C
N
293
R
C
N
294
S
C
N
295
R
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
N
N
300
N
O
N
301
N
O
N
302
N
O
N
303
N
O
N
304
N
O
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
R
C
N
380
N
O
N
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
N
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
N
448
N
C
N
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
doub
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
Y
178
N
sing
Y
179
N
doub
Y
180
N
doub
N
181
N
sing
Y
182
N
sing
N
183
N
sing
Y
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
Y
413
N
doub
Y
414
N
sing
Y
415
N
sing
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
UK
Structure
STRUE6
2005
0969-2126
17
1614
10.1016/J.STR.2009.09.014
20004165
Unraveling the Allosteric Mechanism of Serine Protease Inhibition by an Antibody
2009
10.2210/pdb2wuc/pdb
pdb_00002wuc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2008-06-11
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.97607
1.0
BL7-1
SSRL
0.97607
SYNCHROTRON
SSRL BEAMLINE BL7-1
N-GLYCOSYLATION AT ASN74
27982.635
HEPATOCYTE GROWTH FACTOR ACTIVATOR LONG CHAIN
3.4.21.-
1
man
polymer
3962.654
HEPATOCYTE GROWTH FACTOR ACTIVATOR SHORT CHAIN
3.4.21.-
1
man
polymer
23584.395
FAB FRAGMENT FAB40.DELTATRP HEAVY CHAIN
1
man
polymer
606.202
ACE-KQLR-CHLOROMETHYLKETONE INHIBITOR
1
syn
polymer
23238.748
FAB FRAGMENT FAB40.DELTATRP LIGHT CHAIN
1
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
18.015
water
131
nat
water
no
no
IIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTL
YSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKC
SSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIRP
PRRLVAPSAAAHHHHHH
IIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTL
YSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKC
SSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIRP
PRRLVAPSAAAHHHHHH
A
polypeptide(L)
no
no
VQLSPDLLATLPEPASPGRQACGRRHKKRTFLRPR
VQLSPDLLATLPEPASPGRQACGRRHKKRTFLRPR
B
polypeptide(L)
no
no
EVQLVESGGGLVQPGGSLRLSCAASGFTINGTYIHWVRQAPGKGLEWVGGIYPAGGATYYADSVKGRFTISADTSKNTAY
LQMNSLRAEDTAVYYCAKWAWPAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS
GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EVQLVESGGGLVQPGGSLRLSCAASGFTINGTYIHWVRQAPGKGLEWVGGIYPAGGATYYADSVKGRFTISADTSKNTAY
LQMNSLRAEDTAVYYCAKWAWPAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS
GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
H
polypeptide(L)
no
yes
(ACE)KQL(AR7)(0QE)
XKQLRX
I
polypeptide(L)
no
no
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP
EDFATYYCQQSNRAPATFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ
ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP
EDFATYYCQQSNRAPATFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ
ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
CABBAGE LOOPER
sample
9606
HOMO SAPIENS
7111
TRICHOPLUSIA NI
BACULOGOLD
BACULOVIRUS
HUMAN
CABBAGE LOOPER
sample
9606
HOMO SAPIENS
7111
TRICHOPLUSIA NI
BACULOGOLD
BACULOVIRUS
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
33D3
PLASMID
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
33D3
PLASMID
1
2.92
57.55
7.2
14% PEG 10,000, 100 MM HEPES PH 7.2
atom_site
chem_comp
pdbx_database_status
pdbx_unobs_or_zero_occ_atoms
struct_conn
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_validate_close_contact
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_sheet
repository
Initial release
Carbohydrate remediation
repository
Remediation
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Other
Other
Source and taxonomy
Advisory
Atomic model
Data collection
Derived calculations
Other
Advisory
Atomic model
Data collection
Derived calculations
Structure summary
Data collection
Database references
Derived calculations
Refinement description
Structure summary
1
0
2009-12-15
1
1
2011-07-13
1
2
2012-06-06
1
3
2013-03-06
1
4
2016-12-21
2
0
2020-07-01
3
0
2020-07-29
3
1
2023-12-20
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.label_atom_id
_atom_site.type_symbol
_chem_comp.type
_pdbx_database_status.status_code_sf
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_label_atom_id
_atom_site.auth_asym_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_chem_comp.name
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_sheet.number_strands
A
NAG
1244
n
C
NAG
1
A
NAG
1245
n
C
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
PROTEASE DOMAIN OF HGFA WITH NO INHIBITOR
SHORT FORM HGFA WITH FIRST KUNITZ DOMAIN FROM HAI-1
CRYSTAL STRUCTURE OF HGFA IN COMPLEX WITH THE ALLOSTERIC NON-INHIBITORY ANTIBODY FAB40. DELTATRP
SHEET
DETERMINATION METHOD: DSSP
THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS
BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY
A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS
ARE IDENTICAL.
THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN
ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW,
TWO SHEETS ARE DEFINED.
PDBE
Y
PDBE
2009-10-01
REL
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
6
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
6
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
6
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
6
O1
HO4
sing
n
n
HOH
water
32630
SYNTHETIC CONSTRUCT
sample
THE UNBOUND FORM OF THE INHIBITOR IS ACE-KQLR-CHLOROMETHYLKETONE.
UPON REACTION WITH PROTEIN IT FORMS TWO COVALENT BONDS: 1) A
COVALENT BOND TO SER 195 FORMING A HEMIKETAL AR7 AND 2) A COVALENT
BOND TO NE2 OF HIS 57
2WUB
PDB ENTRY 2WUB
PDB
experimental model
Inhibitor
N-acetyl-6-ammonio-L-norleucyl-L-glutaminyl-N-[(1S)-4-{[amino(iminio)methyl]amino}-1-(chloroacetyl)butyl]-L-leucinamide
Peptide-like
HOH
2001
7
HOH
HOH
2001
A
HOH
2002
7
HOH
HOH
2002
A
HOH
2003
7
HOH
HOH
2003
A
HOH
2004
7
HOH
HOH
2004
A
HOH
2005
7
HOH
HOH
2005
A
HOH
2006
7
HOH
HOH
2006
A
HOH
2007
7
HOH
HOH
2007
A
HOH
2008
7
HOH
HOH
2008
A
HOH
2009
7
HOH
HOH
2009
A
HOH
2010
7
HOH
HOH
2010
A
HOH
2011
7
HOH
HOH
2011
A
HOH
2012
7
HOH
HOH
2012
A
HOH
2013
7
HOH
HOH
2013
A
HOH
2014
7
HOH
HOH
2014
A
HOH
2015
7
HOH
HOH
2015
A
HOH
2016
7
HOH
HOH
2016
A
HOH
2017
7
HOH
HOH
2017
A
HOH
2018
7
HOH
HOH
2018
A
HOH
2019
7
HOH
HOH
2019
A
HOH
2020
7
HOH
HOH
2020
A
HOH
2021
7
HOH
HOH
2021
A
HOH
2022
7
HOH
HOH
2022
A
HOH
2023
7
HOH
HOH
2023
A
HOH
2024
7
HOH
HOH
2024
A
HOH
2025
7
HOH
HOH
2025
A
HOH
2026
7
HOH
HOH
2026
A
HOH
2027
7
HOH
HOH
2027
A
HOH
2028
7
HOH
HOH
2028
A
HOH
2029
7
HOH
HOH
2029
A
HOH
2030
7
HOH
HOH
2030
A
HOH
2031
7
HOH
HOH
2031
A
HOH
2032
7
HOH
HOH
2032
A
HOH
2033
7
HOH
HOH
2033
A
HOH
2034
7
HOH
HOH
2034
A
HOH
2035
7
HOH
HOH
2035
A
HOH
2036
7
HOH
HOH
2036
A
HOH
2037
7
HOH
HOH
2037
A
HOH
2038
7
HOH
HOH
2038
A
HOH
2039
7
HOH
HOH
2039
A
HOH
2040
7
HOH
HOH
2040
A
HOH
2041
7
HOH
HOH
2041
A
HOH
2042
7
HOH
HOH
2042
A
HOH
2001
7
HOH
HOH
2001
B
HOH
2001
7
HOH
HOH
2001
H
HOH
2002
7
HOH
HOH
2002
H
HOH
2003
7
HOH
HOH
2003
H
HOH
2004
7
HOH
HOH
2004
H
HOH
2005
7
HOH
HOH
2005
H
HOH
2006
7
HOH
HOH
2006
H
HOH
2007
7
HOH
HOH
2007
H
HOH
2008
7
HOH
HOH
2008
H
HOH
2009
7
HOH
HOH
2009
H
HOH
2010
7
HOH
HOH
2010
H
HOH
2011
7
HOH
HOH
2011
H
HOH
2012
7
HOH
HOH
2012
H
HOH
2013
7
HOH
HOH
2013
H
HOH
2014
7
HOH
HOH
2014
H
HOH
2015
7
HOH
HOH
2015
H
HOH
2016
7
HOH
HOH
2016
H
HOH
2017
7
HOH
HOH
2017
H
HOH
2018
7
HOH
HOH
2018
H
HOH
2019
7
HOH
HOH
2019
H
HOH
2020
7
HOH
HOH
2020
H
HOH
2021
7
HOH
HOH
2021
H
HOH
2022
7
HOH
HOH
2022
H
HOH
2023
7
HOH
HOH
2023
H
HOH
2024
7
HOH
HOH
2024
H
HOH
2025
7
HOH
HOH
2025
H
HOH
2026
7
HOH
HOH
2026
H
HOH
2027
7
HOH
HOH
2027
H
HOH
2028
7
HOH
HOH
2028
H
HOH
2029
7
HOH
HOH
2029
H
HOH
2030
7
HOH
HOH
2030
H
HOH
2001
7
HOH
HOH
2001
I
HOH
2002
7
HOH
HOH
2002
I
HOH
2001
7
HOH
HOH
2001
L
HOH
2002
7
HOH
HOH
2002
L
HOH
2003
7
HOH
HOH
2003
L
HOH
2004
7
HOH
HOH
2004
L
HOH
2005
7
HOH
HOH
2005
L
HOH
2006
7
HOH
HOH
2006
L
HOH
2007
7
HOH
HOH
2007
L
HOH
2008
7
HOH
HOH
2008
L
HOH
2009
7
HOH
HOH
2009
L
HOH
2010
7
HOH
HOH
2010
L
HOH
2011
7
HOH
HOH
2011
L
HOH
2012
7
HOH
HOH
2012
L
HOH
2013
7
HOH
HOH
2013
L
HOH
2014
7
HOH
HOH
2014
L
HOH
2015
7
HOH
HOH
2015
L
HOH
2016
7
HOH
HOH
2016
L
HOH
2017
7
HOH
HOH
2017
L
HOH
2018
7
HOH
HOH
2018
L
HOH
2019
7
HOH
HOH
2019
L
HOH
2020
7
HOH
HOH
2020
L
HOH
2021
7
HOH
HOH
2021
L
HOH
2022
7
HOH
HOH
2022
L
HOH
2023
7
HOH
HOH
2023
L
HOH
2024
7
HOH
HOH
2024
L
HOH
2025
7
HOH
HOH
2025
L
HOH
2026
7
HOH
HOH
2026
L
HOH
2027
7
HOH
HOH
2027
L
HOH
2028
7
HOH
HOH
2028
L
HOH
2029
7
HOH
HOH
2029
L
HOH
2030
7
HOH
HOH
2030
L
HOH
2031
7
HOH
HOH
2031
L
HOH
2032
7
HOH
HOH
2032
L
HOH
2033
7
HOH
HOH
2033
L
HOH
2034
7
HOH
HOH
2034
L
HOH
2035
7
HOH
HOH
2035
L
HOH
2036
7
HOH
HOH
2036
L
HOH
2037
7
HOH
HOH
2037
L
HOH
2038
7
HOH
HOH
2038
L
HOH
2039
7
HOH
HOH
2039
L
HOH
2040
7
HOH
HOH
2040
L
HOH
2041
7
HOH
HOH
2041
L
HOH
2042
7
HOH
HOH
2042
L
HOH
2043
7
HOH
HOH
2043
L
HOH
2044
7
HOH
HOH
2044
L
HOH
2045
7
HOH
HOH
2045
L
HOH
2046
7
HOH
HOH
2046
L
HOH
2047
7
HOH
HOH
2047
L
HOH
2048
7
HOH
HOH
2048
L
HOH
2049
7
HOH
HOH
2049
L
HOH
2050
7
HOH
HOH
2050
L
HOH
2051
7
HOH
HOH
2051
L
HOH
2052
7
HOH
HOH
2052
L
HOH
2053
7
HOH
HOH
2053
L
HOH
2054
7
HOH
HOH
2054
L
HOH
2055
7
HOH
HOH
2055
L
HOH
2056
7
HOH
HOH
2056
L
ILE
16
n
1
ILE
16
A
ILE
17
n
2
ILE
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
SER
20
n
5
SER
20
A
SER
21
n
6
SER
21
A
SER
22
n
7
SER
22
A
LEU
23
n
8
LEU
23
A
PRO
24
n
9
PRO
24
A
GLY
25
n
10
GLY
25
A
SER
26
n
11
SER
26
A
HIS
27
n
12
HIS
27
A
PRO
28
n
13
PRO
28
A
TRP
29
n
14
TRP
29
A
LEU
30
n
15
LEU
30
A
ALA
31
n
16
ALA
31
A
ALA
32
n
17
ALA
32
A
ILE
33
n
18
ILE
33
A
TYR
34
n
19
TYR
34
A
ILE
35
n
20
ILE
35
A
GLY
36
n
21
GLY
36
A
ASP
39
n
22
ASP
39
A
SER
40
n
23
SER
40
A
PHE
41
n
24
PHE
41
A
CYS
42
n
25
CYS
42
A
ALA
43
n
26
ALA
43
A
GLY
44
n
27
GLY
44
A
SER
45
n
28
SER
45
A
LEU
46
n
29
LEU
46
A
VAL
47
n
30
VAL
47
A
HIS
48
n
31
HIS
48
A
THR
49
n
32
THR
49
A
CYS
50
n
33
CYS
50
A
TRP
51
n
34
TRP
51
A
VAL
52
n
35
VAL
52
A
VAL
53
n
36
VAL
53
A
SER
54
n
37
SER
54
A
ALA
55
n
38
ALA
55
A
ALA
56
n
39
ALA
56
A
HIS
57
n
40
HIS
57
A
CYS
58
n
41
CYS
58
A
PHE
59
n
42
PHE
59
A
SER
60
n
43
SER
60
A
HIS
60
n
44
A
HIS
60
A
SER
60
n
45
B
SER
60
A
PRO
60
n
46
C
PRO
60
A
PRO
60
n
47
D
PRO
60
A
ARG
61
n
48
ARG
61
A
ASP
62
n
49
ASP
62
A
SER
63
n
50
SER
63
A
VAL
64
n
51
VAL
64
A
SER
65
n
52
SER
65
A
VAL
66
n
53
VAL
66
A
VAL
67
n
54
VAL
67
A
LEU
68
n
55
LEU
68
A
GLY
69
n
56
GLY
69
A
GLN
70
n
57
GLN
70
A
HIS
71
n
58
HIS
71
A
PHE
72
n
59
PHE
72
A
PHE
73
n
60
PHE
73
A
ASN
74
n
61
ASN
74
A
ARG
75
n
62
ARG
75
A
THR
76
n
63
THR
76
A
THR
77
n
64
THR
77
A
ASP
78
n
65
ASP
78
A
VAL
79
n
66
VAL
79
A
THR
80
n
67
THR
80
A
GLN
81
n
68
GLN
81
A
THR
82
n
69
THR
82
A
PHE
83
n
70
PHE
83
A
GLY
84
n
71
GLY
84
A
ILE
85
n
72
ILE
85
A
GLU
86
n
73
GLU
86
A
LYS
87
n
74
LYS
87
A
TYR
88
n
75
TYR
88
A
ILE
89
n
76
ILE
89
A
PRO
90
n
77
PRO
90
A
TYR
91
n
78
TYR
91
A
THR
92
n
79
THR
92
A
LEU
93
n
80
LEU
93
A
TYR
94
n
81
TYR
94
A
SER
95
n
82
SER
95
A
VAL
96
n
83
VAL
96
A
PHE
97
n
84
PHE
97
A
ASN
98
n
85
ASN
98
A
PRO
99
n
86
A
PRO
99
A
SER
99
n
87
SER
99
A
ASP
100
n
88
ASP
100
A
HIS
101
n
89
HIS
101
A
ASP
102
n
90
ASP
102
A
LEU
103
n
91
LEU
103
A
VAL
104
n
92
VAL
104
A
LEU
105
n
93
LEU
105
A
ILE
106
n
94
ILE
106
A
ARG
107
n
95
ARG
107
A
LEU
108
n
96
LEU
108
A
LYS
109
n
97
LYS
109
A
LYS
110
n
98
LYS
110
A
LYS
111
n
99
LYS
111
A
GLY
111
n
100
A
GLY
111
A
ASP
111
n
101
B
ASP
111
A
ARG
111
n
102
C
ARG
111
A
CYS
111
n
103
D
CYS
111
A
ALA
112
n
104
ALA
112
A
THR
113
n
105
THR
113
A
ARG
114
n
106
ARG
114
A
SER
115
n
107
SER
115
A
GLN
116
n
108
GLN
116
A
PHE
117
n
109
PHE
117
A
VAL
118
n
110
VAL
118
A
GLN
119
n
111
GLN
119
A
PRO
120
n
112
PRO
120
A
ILE
121
n
113
ILE
121
A
CYS
122
n
114
CYS
122
A
LEU
123
n
115
LEU
123
A
PRO
124
n
116
PRO
124
A
GLU
125
n
117
GLU
125
A
PRO
126
n
118
PRO
126
A
GLY
127
n
119
GLY
127
A
SER
128
n
120
SER
128
A
THR
129
n
121
THR
129
A
PHE
130
n
122
PHE
130
A
PRO
131
n
123
PRO
131
A
ALA
132
n
124
ALA
132
A
GLY
133
n
125
GLY
133
A
HIS
134
n
126
HIS
134
A
LYS
135
n
127
LYS
135
A
CYS
136
n
128
CYS
136
A
GLN
137
n
129
GLN
137
A
ILE
138
n
130
ILE
138
A
ALA
139
n
131
ALA
139
A
GLY
140
n
132
GLY
140
A
TRP
141
n
133
TRP
141
A
GLY
142
n
134
GLY
142
A
HIS
143
n
135
HIS
143
A
LEU
144
n
136
LEU
144
A
ASP
145
n
137
ASP
145
A
GLU
146
n
138
GLU
146
A
ASN
147
n
139
ASN
147
A
VAL
148
n
140
VAL
148
A
SER
149
n
141
SER
149
A
GLY
150
n
142
GLY
150
A
TYR
151
n
143
TYR
151
A
SER
152
n
144
SER
152
A
SER
153
n
145
SER
153
A
SER
154
n
146
SER
154
A
LEU
155
n
147
LEU
155
A
ARG
156
n
148
ARG
156
A
GLU
157
n
149
GLU
157
A
ALA
158
n
150
ALA
158
A
LEU
159
n
151
LEU
159
A
VAL
160
n
152
VAL
160
A
PRO
161
n
153
PRO
161
A
LEU
162
n
154
LEU
162
A
VAL
163
n
155
VAL
163
A
ALA
164
n
156
ALA
164
A
ASP
165
n
157
ASP
165
A
HIS
166
n
158
HIS
166
A
LYS
167
n
159
LYS
167
A
CYS
168
n
160
CYS
168
A
SER
169
n
161
SER
169
A
SER
170
n
162
SER
170
A
PRO
170
n
163
A
PRO
170
A
GLU
170
n
164
B
GLU
170
A
VAL
171
n
165
VAL
171
A
TYR
172
n
166
TYR
172
A
GLY
173
n
167
GLY
173
A
ALA
174
n
168
ALA
174
A
ASP
175
n
169
ASP
175
A
ILE
176
n
170
ILE
176
A
SER
177
n
171
SER
177
A
PRO
178
n
172
PRO
178
A
ASN
179
n
173
ASN
179
A
MET
180
n
174
MET
180
A
LEU
181
n
175
LEU
181
A
CYS
182
n
176
CYS
182
A
ALA
183
n
177
ALA
183
A
GLY
184
n
178
A
GLY
184
A
TYR
184
n
179
TYR
184
A
PHE
185
n
180
PHE
185
A
ASP
186
n
181
ASP
186
A
CYS
187
n
182
CYS
187
A
LYS
188
n
183
LYS
188
A
SER
188
n
184
A
SER
188
A
ASP
189
n
185
ASP
189
A
ALA
190
n
186
ALA
190
A
CYS
191
n
187
CYS
191
A
GLN
192
n
188
GLN
192
A
GLY
193
n
189
GLY
193
A
ASP
194
n
190
ASP
194
A
SER
195
n
191
SER
195
A
GLY
196
n
192
GLY
196
A
GLY
197
n
193
GLY
197
A
PRO
198
n
194
PRO
198
A
LEU
199
n
195
LEU
199
A
ALA
200
n
196
ALA
200
A
CYS
201
n
197
CYS
201
A
GLU
202
n
198
GLU
202
A
LYS
203
n
199
LYS
203
A
ASN
204
n
200
ASN
204
A
GLY
205
n
201
GLY
205
A
VAL
206
n
202
VAL
206
A
ALA
207
n
203
ALA
207
A
TYR
208
n
204
TYR
208
A
LEU
209
n
205
LEU
209
A
TYR
210
n
206
TYR
210
A
GLY
211
n
207
GLY
211
A
ILE
212
n
208
ILE
212
A
ILE
213
n
209
ILE
213
A
SER
214
n
210
SER
214
A
TRP
215
n
211
TRP
215
A
GLY
216
n
212
GLY
216
A
ASP
217
n
213
ASP
217
A
GLY
219
n
214
GLY
219
A
CYS
220
n
215
CYS
220
A
GLY
221
n
216
A
GLY
221
A
ARG
221
n
217
ARG
221
A
LEU
222
n
218
LEU
222
A
HIS
223
n
219
HIS
223
A
LYS
224
n
220
LYS
224
A
PRO
225
n
221
PRO
225
A
GLY
226
n
222
GLY
226
A
VAL
227
n
223
VAL
227
A
TYR
228
n
224
TYR
228
A
THR
229
n
225
THR
229
A
ARG
230
n
226
ARG
230
A
VAL
231
n
227
VAL
231
A
ALA
232
n
228
ALA
232
A
ASN
233
n
229
ASN
233
A
TYR
234
n
230
TYR
234
A
VAL
235
n
231
VAL
235
A
ASP
236
n
232
ASP
236
A
TRP
237
n
233
TRP
237
A
ILE
238
n
234
ILE
238
A
ASN
239
n
235
ASN
239
A
ASP
240
n
236
ASP
240
A
ARG
241
n
237
ARG
241
A
ILE
242
n
238
ILE
242
A
ARG
243
n
239
ARG
243
A
PRO
244
n
240
PRO
244
A
n
241
245
A
n
242
246
A
n
243
247
A
n
244
248
A
n
245
249
A
n
246
250
A
n
247
251
A
n
248
252
A
n
249
253
A
n
250
254
A
n
251
255
A
n
252
256
A
n
253
257
A
n
254
258
A
n
255
259
A
n
256
260
A
n
257
261
A
n
1
372
B
n
2
373
B
n
3
374
B
n
4
375
B
n
5
376
B
n
6
377
B
n
7
378
B
n
8
379
B
n
9
380
B
n
10
381
B
n
11
382
B
n
12
383
B
n
13
384
B
n
14
385
B
n
15
386
B
n
16
387
B
n
17
388
B
n
18
389
B
n
19
390
B
n
20
391
B
ALA
392
n
21
ALA
392
B
CYS
393
n
22
CYS
393
B
GLY
394
n
23
GLY
394
B
ARG
395
n
24
ARG
395
B
ARG
396
n
25
ARG
396
B
HIS
397
n
26
HIS
397
B
LYS
398
n
27
LYS
398
B
n
28
399
B
n
29
400
B
n
30
401
B
n
31
402
B
n
32
403
B
n
33
404
B
n
34
405
B
n
35
406
B
GLU
1
n
1
GLU
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
GLY
9
n
9
GLY
9
H
GLY
10
n
10
GLY
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
GLN
13
n
13
GLN
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
GLY
16
n
16
GLY
16
H
SER
17
n
17
SER
17
H
LEU
18
n
18
LEU
18
H
ARG
19
n
19
ARG
19
H
LEU
20
n
20
LEU
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
ALA
23
n
23
ALA
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
PHE
27
n
27
PHE
27
H
THR
28
n
28
THR
28
H
ILE
29
n
29
ILE
29
H
ASN
30
n
30
ASN
30
H
GLY
31
n
31
GLY
31
H
THR
32
n
32
THR
32
H
TYR
33
n
33
TYR
33
H
ILE
34
n
34
ILE
34
H
HIS
35
n
35
HIS
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
ARG
38
n
38
ARG
38
H
GLN
39
n
39
GLN
39
H
ALA
40
n
40
ALA
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
LYS
43
n
43
LYS
43
H
GLY
44
n
44
GLY
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
VAL
48
n
48
VAL
48
H
GLY
49
n
49
GLY
49
H
GLY
50
n
50
GLY
50
H
ILE
51
n
51
ILE
51
H
TYR
52
n
52
TYR
52
H
PRO
52
n
53
A
PRO
52
H
ALA
53
n
54
ALA
53
H
GLY
54
n
55
GLY
54
H
GLY
55
n
56
GLY
55
H
ALA
56
n
57
ALA
56
H
THR
57
n
58
THR
57
H
TYR
58
n
59
TYR
58
H
TYR
59
n
60
TYR
59
H
ALA
60
n
61
ALA
60
H
ASP
61
n
62
ASP
61
H
SER
62
n
63
SER
62
H
VAL
63
n
64
VAL
63
H
LYS
64
n
65
LYS
64
H
GLY
65
n
66
GLY
65
H
ARG
66
n
67
ARG
66
H
PHE
67
n
68
PHE
67
H
THR
68
n
69
THR
68
H
ILE
69
n
70
ILE
69
H
SER
70
n
71
SER
70
H
ALA
71
n
72
ALA
71
H
ASP
72
n
73
ASP
72
H
THR
73
n
74
THR
73
H
SER
74
n
75
SER
74
H
LYS
75
n
76
LYS
75
H
ASN
76
n
77
ASN
76
H
THR
77
n
78
THR
77
H
ALA
78
n
79
ALA
78
H
TYR
79
n
80
TYR
79
H
LEU
80
n
81
LEU
80
H
GLN
81
n
82
GLN
81
H
MET
82
n
83
MET
82
H
ASN
82
n
84
A
ASN
82
H
SER
82
n
85
B
SER
82
H
LEU
82
n
86
C
LEU
82
H
ARG
83
n
87
ARG
83
H
ALA
84
n
88
ALA
84
H
GLU
85
n
89
GLU
85
H
ASP
86
n
90
ASP
86
H
THR
87
n
91
THR
87
H
ALA
88
n
92
ALA
88
H
VAL
89
n
93
VAL
89
H
TYR
90
n
94
TYR
90
H
TYR
91
n
95
TYR
91
H
CYS
92
n
96
CYS
92
H
ALA
93
n
97
ALA
93
H
LYS
94
n
98
LYS
94
H
TRP
95
n
99
TRP
95
H
ALA
97
n
100
ALA
97
H
TRP
98
n
101
TRP
98
H
PRO
99
n
102
PRO
99
H
ALA
100
n
103
A
ALA
100
H
PHE
100
n
104
PHE
100
H
ASP
101
n
105
ASP
101
H
TYR
102
n
106
TYR
102
H
TRP
103
n
107
TRP
103
H
GLY
104
n
108
GLY
104
H
GLN
105
n
109
GLN
105
H
GLY
106
n
110
GLY
106
H
THR
107
n
111
THR
107
H
LEU
108
n
112
LEU
108
H
VAL
109
n
113
VAL
109
H
THR
110
n
114
THR
110
H
VAL
111
n
115
VAL
111
H
SER
112
n
116
SER
112
H
SER
113
n
117
SER
113
H
ALA
114
n
118
ALA
114
H
SER
115
n
119
SER
115
H
THR
116
n
120
THR
116
H
LYS
117
n
121
LYS
117
H
GLY
118
n
122
GLY
118
H
PRO
119
n
123
PRO
119
H
SER
120
n
124
SER
120
H
VAL
121
n
125
VAL
121
H
PHE
122
n
126
PHE
122
H
PRO
123
n
127
PRO
123
H
LEU
124
n
128
LEU
124
H
ALA
125
n
129
ALA
125
H
PRO
126
n
130
PRO
126
H
SER
127
n
131
SER
127
H
SER
128
n
132
SER
128
H
n
133
129
H
n
134
130
H
THR
131
n
135
THR
131
H
SER
132
n
136
SER
132
H
GLY
133
n
137
GLY
133
H
GLY
134
n
138
GLY
134
H
THR
135
n
139
THR
135
H
ALA
136
n
140
ALA
136
H
ALA
137
n
141
ALA
137
H
LEU
138
n
142
LEU
138
H
GLY
139
n
143
GLY
139
H
CYS
140
n
144
CYS
140
H
LEU
141
n
145
LEU
141
H
VAL
142
n
146
VAL
142
H
LYS
143
n
147
LYS
143
H
ASP
144
n
148
ASP
144
H
TYR
145
n
149
TYR
145
H
PHE
146
n
150
PHE
146
H
PRO
147
n
151
PRO
147
H
GLU
148
n
152
GLU
148
H
PRO
149
n
153
PRO
149
H
VAL
150
n
154
VAL
150
H
THR
151
n
155
THR
151
H
VAL
152
n
156
VAL
152
H
SER
153
n
157
SER
153
H
TRP
154
n
158
TRP
154
H
ASN
155
n
159
ASN
155
H
SER
156
n
160
SER
156
H
GLY
157
n
161
GLY
157
H
ALA
158
n
162
ALA
158
H
LEU
159
n
163
LEU
159
H
THR
160
n
164
THR
160
H
SER
161
n
165
SER
161
H
GLY
162
n
166
GLY
162
H
VAL
163
n
167
VAL
163
H
HIS
164
n
168
HIS
164
H
THR
165
n
169
THR
165
H
PHE
166
n
170
PHE
166
H
PRO
167
n
171
PRO
167
H
ALA
168
n
172
ALA
168
H
VAL
169
n
173
VAL
169
H
LEU
170
n
174
LEU
170
H
GLN
171
n
175
GLN
171
H
SER
172
n
176
SER
172
H
SER
173
n
177
SER
173
H
GLY
174
n
178
GLY
174
H
LEU
175
n
179
LEU
175
H
TYR
176
n
180
TYR
176
H
SER
177
n
181
SER
177
H
LEU
178
n
182
LEU
178
H
SER
179
n
183
SER
179
H
SER
180
n
184
SER
180
H
VAL
181
n
185
VAL
181
H
VAL
182
n
186
VAL
182
H
THR
183
n
187
THR
183
H
VAL
184
n
188
VAL
184
H
PRO
185
n
189
PRO
185
H
SER
186
n
190
SER
186
H
SER
187
n
191
SER
187
H
SER
188
n
192
SER
188
H
LEU
189
n
193
LEU
189
H
GLY
190
n
194
GLY
190
H
THR
191
n
195
THR
191
H
GLN
192
n
196
GLN
192
H
THR
193
n
197
THR
193
H
TYR
194
n
198
TYR
194
H
ILE
195
n
199
ILE
195
H
CYS
196
n
200
CYS
196
H
ASN
197
n
201
ASN
197
H
VAL
198
n
202
VAL
198
H
ASN
199
n
203
ASN
199
H
HIS
200
n
204
HIS
200
H
LYS
201
n
205
LYS
201
H
PRO
202
n
206
PRO
202
H
SER
203
n
207
SER
203
H
ASN
204
n
208
ASN
204
H
THR
205
n
209
THR
205
H
LYS
206
n
210
LYS
206
H
VAL
207
n
211
VAL
207
H
ASP
208
n
212
ASP
208
H
LYS
209
n
213
LYS
209
H
LYS
210
n
214
LYS
210
H
VAL
211
n
215
VAL
211
H
GLU
212
n
216
GLU
212
H
PRO
213
n
217
PRO
213
H
LYS
214
n
218
LYS
214
H
SER
215
n
219
SER
215
H
CYS
216
n
220
CYS
216
H
ASP
217
n
221
ASP
217
H
n
222
218
H
n
223
219
H
n
224
220
H
ACE
1
n
1
ACE
1
I
LYS
2
n
2
LYS
2
I
GLN
3
n
3
GLN
3
I
LEU
4
n
4
LEU
4
I
AR7
5
n
5
AR7
5
I
0QE
6
n
6
0QE
6
I
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
GLN
3
n
3
GLN
3
L
MET
4
n
4
MET
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
SER
9
n
9
SER
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
SER
12
n
12
SER
12
L
ALA
13
n
13
ALA
13
L
SER
14
n
14
SER
14
L
VAL
15
n
15
VAL
15
L
GLY
16
n
16
GLY
16
L
ASP
17
n
17
ASP
17
L
ARG
18
n
18
ARG
18
L
VAL
19
n
19
VAL
19
L
THR
20
n
20
THR
20
L
ILE
21
n
21
ILE
21
L
THR
22
n
22
THR
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
ALA
25
n
25
ALA
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
ASP
28
n
28
ASP
28
L
VAL
29
n
29
VAL
29
L
SER
30
n
30
SER
30
L
THR
31
n
31
THR
31
L
ALA
32
n
32
ALA
32
L
VAL
33
n
33
VAL
33
L
ALA
34
n
34
ALA
34
L
TRP
35
n
35
TRP
35
L
TYR
36
n
36
TYR
36
L
GLN
37
n
37
GLN
37
L
GLN
38
n
38
GLN
38
L
LYS
39
n
39
LYS
39
L
PRO
40
n
40
PRO
40
L
GLY
41
n
41
GLY
41
L
LYS
42
n
42
LYS
42
L
ALA
43
n
43
ALA
43
L
PRO
44
n
44
PRO
44
L
LYS
45
n
45
LYS
45
L
LEU
46
n
46
LEU
46
L
LEU
47
n
47
LEU
47
L
ILE
48
n
48
ILE
48
L
TYR
49
n
49
TYR
49
L
SER
50
n
50
SER
50
L
ALA
51
n
51
ALA
51
L
SER
52
n
52
SER
52
L
PHE
53
n
53
PHE
53
L
LEU
54
n
54
LEU
54
L
TYR
55
n
55
TYR
55
L
SER
56
n
56
SER
56
L
GLY
57
n
57
GLY
57
L
VAL
58
n
58
VAL
58
L
PRO
59
n
59
PRO
59
L
SER
60
n
60
SER
60
L
ARG
61
n
61
ARG
61
L
PHE
62
n
62
PHE
62
L
SER
63
n
63
SER
63
L
GLY
64
n
64
GLY
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
GLY
68
n
68
GLY
68
L
THR
69
n
69
THR
69
L
ASP
70
n
70
ASP
70
L
PHE
71
n
71
PHE
71
L
THR
72
n
72
THR
72
L
LEU
73
n
73
LEU
73
L
THR
74
n
74
THR
74
L
ILE
75
n
75
ILE
75
L
SER
76
n
76
SER
76
L
SER
77
n
77
SER
77
L
LEU
78
n
78
LEU
78
L
GLN
79
n
79
GLN
79
L
PRO
80
n
80
PRO
80
L
GLU
81
n
81
GLU
81
L
ASP
82
n
82
ASP
82
L
PHE
83
n
83
PHE
83
L
ALA
84
n
84
ALA
84
L
THR
85
n
85
THR
85
L
TYR
86
n
86
TYR
86
L
TYR
87
n
87
TYR
87
L
CYS
88
n
88
CYS
88
L
GLN
89
n
89
GLN
89
L
GLN
90
n
90
GLN
90
L
SER
91
n
91
SER
91
L
ASN
92
n
92
ASN
92
L
ARG
93
n
93
ARG
93
L
ALA
94
n
94
ALA
94
L
PRO
95
n
95
PRO
95
L
ALA
96
n
96
ALA
96
L
THR
97
n
97
THR
97
L
PHE
98
n
98
PHE
98
L
GLY
99
n
99
GLY
99
L
GLN
100
n
100
GLN
100
L
GLY
101
n
101
GLY
101
L
THR
102
n
102
THR
102
L
LYS
103
n
103
LYS
103
L
VAL
104
n
104
VAL
104
L
GLU
105
n
105
GLU
105
L
ILE
106
n
106
ILE
106
L
LYS
107
n
107
LYS
107
L
ARG
108
n
108
ARG
108
L
THR
109
n
109
THR
109
L
VAL
110
n
110
VAL
110
L
ALA
111
n
111
ALA
111
L
ALA
112
n
112
ALA
112
L
PRO
113
n
113
PRO
113
L
SER
114
n
114
SER
114
L
VAL
115
n
115
VAL
115
L
PHE
116
n
116
PHE
116
L
ILE
117
n
117
ILE
117
L
PHE
118
n
118
PHE
118
L
PRO
119
n
119
PRO
119
L
PRO
120
n
120
PRO
120
L
SER
121
n
121
SER
121
L
ASP
122
n
122
ASP
122
L
GLU
123
n
123
GLU
123
L
GLN
124
n
124
GLN
124
L
LEU
125
n
125
LEU
125
L
LYS
126
n
126
LYS
126
L
SER
127
n
127
SER
127
L
GLY
128
n
128
GLY
128
L
THR
129
n
129
THR
129
L
ALA
130
n
130
ALA
130
L
SER
131
n
131
SER
131
L
VAL
132
n
132
VAL
132
L
VAL
133
n
133
VAL
133
L
CYS
134
n
134
CYS
134
L
LEU
135
n
135
LEU
135
L
LEU
136
n
136
LEU
136
L
ASN
137
n
137
ASN
137
L
ASN
138
n
138
ASN
138
L
PHE
139
n
139
PHE
139
L
TYR
140
n
140
TYR
140
L
PRO
141
n
141
PRO
141
L
ARG
142
n
142
ARG
142
L
GLU
143
n
143
GLU
143
L
ALA
144
n
144
ALA
144
L
LYS
145
n
145
LYS
145
L
VAL
146
n
146
VAL
146
L
GLN
147
n
147
GLN
147
L
TRP
148
n
148
TRP
148
L
LYS
149
n
149
LYS
149
L
VAL
150
n
150
VAL
150
L
ASP
151
n
151
ASP
151
L
ASN
152
n
152
ASN
152
L
ALA
153
n
153
ALA
153
L
LEU
154
n
154
LEU
154
L
GLN
155
n
155
GLN
155
L
SER
156
n
156
SER
156
L
GLY
157
n
157
GLY
157
L
ASN
158
n
158
ASN
158
L
SER
159
n
159
SER
159
L
GLN
160
n
160
GLN
160
L
GLU
161
n
161
GLU
161
L
SER
162
n
162
SER
162
L
VAL
163
n
163
VAL
163
L
THR
164
n
164
THR
164
L
GLU
165
n
165
GLU
165
L
GLN
166
n
166
GLN
166
L
ASP
167
n
167
ASP
167
L
SER
168
n
168
SER
168
L
LYS
169
n
169
LYS
169
L
ASP
170
n
170
ASP
170
L
SER
171
n
171
SER
171
L
THR
172
n
172
THR
172
L
TYR
173
n
173
TYR
173
L
SER
174
n
174
SER
174
L
LEU
175
n
175
LEU
175
L
SER
176
n
176
SER
176
L
SER
177
n
177
SER
177
L
THR
178
n
178
THR
178
L
LEU
179
n
179
LEU
179
L
THR
180
n
180
THR
180
L
LEU
181
n
181
LEU
181
L
SER
182
n
182
SER
182
L
LYS
183
n
183
LYS
183
L
ALA
184
n
184
ALA
184
L
ASP
185
n
185
ASP
185
L
TYR
186
n
186
TYR
186
L
GLU
187
n
187
GLU
187
L
LYS
188
n
188
LYS
188
L
HIS
189
n
189
HIS
189
L
LYS
190
n
190
LYS
190
L
VAL
191
n
191
VAL
191
L
TYR
192
n
192
TYR
192
L
ALA
193
n
193
ALA
193
L
CYS
194
n
194
CYS
194
L
GLU
195
n
195
GLU
195
L
VAL
196
n
196
VAL
196
L
THR
197
n
197
THR
197
L
HIS
198
n
198
HIS
198
L
GLN
199
n
199
GLN
199
L
GLY
200
n
200
GLY
200
L
LEU
201
n
201
LEU
201
L
SER
202
n
202
SER
202
L
SER
203
n
203
SER
203
L
PRO
204
n
204
PRO
204
L
VAL
205
n
205
VAL
205
L
THR
206
n
206
THR
206
L
LYS
207
n
207
LYS
207
L
SER
208
n
208
SER
208
L
PHE
209
n
209
PHE
209
L
ASN
210
n
210
ASN
210
L
ARG
211
n
211
ARG
211
L
GLY
212
n
212
GLY
212
L
GLU
213
n
213
GLU
213
L
CYS
214
n
214
CYS
214
L
author_and_software_defined_assembly
PISA
5
pentameric
8190
-33.8
28360
A
ASN
74
GLYCOSYLATION SITE
A
ASN
61
ASN
I
AR7
5
D
AR7
5
ARG
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
20
A
N
SER
5
A
O
GLU
157
A
O
GLU
149
A
N
VAL
160
A
N
VAL
152
A
O
CYS
136
A
O
CYS
128
A
N
GLN
137
A
N
GLN
129
A
O
ALA
200
A
O
ALA
196
A
N
LYS
203
A
N
LYS
199
A
O
VAL
206
A
O
VAL
202
A
N
TRP
215
A
N
TRP
211
A
O
VAL
227
A
O
VAL
223
A
N
TYR
228
A
N
TYR
224
A
O
LEU
181
A
O
LEU
175
A
N
ILE
35
A
N
ILE
20
A
O
SER
40
A
O
SER
23
A
N
VAL
47
A
N
VAL
30
A
O
TRP
51
A
O
TRP
34
A
N
SER
54
A
N
SER
37
A
O
VAL
104
A
O
VAL
92
A
O
ARG
107
A
O
ARG
95
A
N
GLU
86
A
N
GLU
73
A
N
ILE
85
A
N
ILE
72
A
O
VAL
64
A
O
VAL
51
A
N
VAL
67
A
N
VAL
54
A
O
ALA
32
A
O
ALA
17
H
N
SER
7
C
N
SER
7
H
O
SER
21
C
O
SER
21
H
N
CYS
22
C
N
CYS
22
H
O
ALA
78
C
O
ALA
79
H
N
GLN
81
C
N
GLN
82
H
O
THR
68
C
O
THR
69
H
N
GLY
10
C
N
GLY
10
H
O
LEU
108
C
O
LEU
112
H
N
VAL
109
C
N
VAL
113
H
O
ALA
88
C
O
ALA
92
H
N
TYR
91
C
N
TYR
95
H
O
VAL
37
C
O
VAL
37
H
N
TYR
58
C
N
TYR
59
H
O
GLY
50
C
O
GLY
50
H
N
TYR
33
C
N
TYR
33
H
O
TRP
95
C
O
TRP
99
H
N
TRP
95
C
N
TRP
99
H
O
TYR
33
C
O
TYR
33
H
N
LEU
124
C
N
LEU
128
H
O
GLY
139
C
O
GLY
143
H
N
TYR
145
C
N
TYR
149
H
O
TYR
176
C
O
TYR
180
H
N
VAL
181
C
N
VAL
185
H
O
HIS
164
C
O
HIS
168
H
N
SER
177
C
N
SER
181
H
O
VAL
169
C
O
VAL
173
H
N
VAL
169
C
N
VAL
173
H
O
SER
177
C
O
SER
181
H
N
SER
153
C
N
SER
157
H
O
ASN
197
C
O
ASN
201
H
N
HIS
200
C
N
HIS
204
H
O
THR
205
C
O
THR
209
L
N
SER
7
E
N
SER
7
L
O
THR
22
E
O
THR
22
L
N
CYS
23
E
N
CYS
23
L
O
PHE
71
E
O
PHE
71
L
N
THR
74
E
N
THR
74
L
O
SER
63
E
O
SER
63
L
N
LEU
11
E
N
LEU
11
L
O
LYS
103
E
O
LYS
103
L
N
VAL
104
E
N
VAL
104
L
O
ALA
84
E
O
ALA
84
L
N
PHE
53
E
N
PHE
53
L
O
TYR
49
E
O
TYR
49
L
N
LEU
47
E
N
LEU
47
L
O
TRP
35
E
O
TRP
35
L
N
GLN
90
E
N
GLN
90
L
O
THR
97
E
O
THR
97
L
N
THR
97
E
N
THR
97
L
O
GLN
90
E
O
GLN
90
L
N
PHE
118
E
N
PHE
118
L
O
VAL
133
E
O
VAL
133
L
N
PHE
139
E
N
PHE
139
L
O
TYR
173
E
O
TYR
173
L
N
THR
178
E
N
THR
178
L
O
GLN
160
E
O
GLN
160
L
N
ALA
153
E
N
ALA
153
L
O
VAL
150
E
O
VAL
150
L
N
LYS
149
E
N
LYS
149
L
O
ALA
193
E
O
ALA
193
L
N
VAL
196
E
N
VAL
196
L
O
VAL
205
E
O
VAL
205
1
A
CA
PRO
244
A
CA
PRO
240
1
Y
1
A
C
PRO
244
A
C
PRO
240
1
Y
1
A
O
PRO
244
A
O
PRO
240
1
Y
1
A
CB
PRO
244
A
CB
PRO
240
1
Y
1
A
CG
PRO
244
A
CG
PRO
240
1
Y
1
A
CD
PRO
244
A
CD
PRO
240
1
Y
1
B
CA
LYS
398
B
CA
LYS
27
1
Y
1
B
C
LYS
398
B
C
LYS
27
1
Y
1
B
O
LYS
398
B
O
LYS
27
1
Y
1
B
CB
LYS
398
B
CB
LYS
27
1
Y
1
B
CG
LYS
398
B
CG
LYS
27
1
Y
1
B
CD
LYS
398
B
CD
LYS
27
1
Y
1
B
CE
LYS
398
B
CE
LYS
27
1
Y
1
B
NZ
LYS
398
B
NZ
LYS
27
1
Y
1
H
CA
ASP
217
C
CA
ASP
221
1
Y
1
H
C
ASP
217
C
C
ASP
221
1
Y
1
H
O
ASP
217
C
O
ASP
221
1
Y
1
H
CB
ASP
217
C
CB
ASP
221
1
Y
1
H
CG
ASP
217
C
CG
ASP
221
1
Y
1
H
OD1
ASP
217
C
OD1
ASP
221
1
Y
1
H
OD2
ASP
217
C
OD2
ASP
221
1
Y
1
A
PRO
245
A
PRO
241
1
Y
1
A
ARG
246
A
ARG
242
1
Y
1
A
ARG
247
A
ARG
243
1
Y
1
A
LEU
248
A
LEU
244
1
Y
1
A
VAL
249
A
VAL
245
1
Y
1
A
ALA
250
A
ALA
246
1
Y
1
A
PRO
251
A
PRO
247
1
Y
1
A
SER
252
A
SER
248
1
Y
1
A
ALA
253
A
ALA
249
1
Y
1
A
ALA
254
A
ALA
250
1
Y
1
A
ALA
255
A
ALA
251
1
Y
1
A
HIS
256
A
HIS
252
1
Y
1
A
HIS
257
A
HIS
253
1
Y
1
A
HIS
258
A
HIS
254
1
Y
1
A
HIS
259
A
HIS
255
1
Y
1
A
HIS
260
A
HIS
256
1
Y
1
A
HIS
261
A
HIS
257
1
Y
1
B
VAL
372
B
VAL
1
1
Y
1
B
GLN
373
B
GLN
2
1
Y
1
B
LEU
374
B
LEU
3
1
Y
1
B
SER
375
B
SER
4
1
Y
1
B
PRO
376
B
PRO
5
1
Y
1
B
ASP
377
B
ASP
6
1
Y
1
B
LEU
378
B
LEU
7
1
Y
1
B
LEU
379
B
LEU
8
1
Y
1
B
ALA
380
B
ALA
9
1
Y
1
B
THR
381
B
THR
10
1
Y
1
B
LEU
382
B
LEU
11
1
Y
1
B
PRO
383
B
PRO
12
1
Y
1
B
GLU
384
B
GLU
13
1
Y
1
B
PRO
385
B
PRO
14
1
Y
1
B
ALA
386
B
ALA
15
1
Y
1
B
SER
387
B
SER
16
1
Y
1
B
PRO
388
B
PRO
17
1
Y
1
B
GLY
389
B
GLY
18
1
Y
1
B
ARG
390
B
ARG
19
1
Y
1
B
GLN
391
B
GLN
20
1
Y
1
B
LYS
399
B
LYS
28
1
Y
1
B
ARG
400
B
ARG
29
1
Y
1
B
THR
401
B
THR
30
1
Y
1
B
PHE
402
B
PHE
31
1
Y
1
B
LEU
403
B
LEU
32
1
Y
1
B
ARG
404
B
ARG
33
1
Y
1
B
PRO
405
B
PRO
34
1
Y
1
B
ARG
406
B
ARG
35
1
Y
1
H
LYS
129
C
LYS
133
1
Y
1
H
SER
130
C
SER
134
1
Y
1
H
LYS
218
C
LYS
222
1
Y
1
H
THR
219
C
THR
223
1
Y
1
H
HIS
220
C
HIS
224
1
Y
1
A
C
ND2
C2
ASN
NAG
74
1
2.16
1
A
I
CD2
C1
HIS
0QE
57
6
2.17
1
I
LEU
4
-15.75
1
7.02
1.10
114.20
121.22
H
H
H
CA
CB
SG
CYS
CYS
CYS
22
22
22
N
1
L
L
O
O
HOH
HOH
2002
2002
2.14
1_555
4_545
1
A
ASN
98
-164.44
55.53
1
A
LYS
111
-111.84
53.18
C
1
A
ARG
111
-151.17
-158.45
D
1
A
CYS
111
-109.27
-91.31
1
A
ALA
158
-172.67
138.28
1
A
VAL
171
-87.16
-92.42
1
A
CYS
187
73.03
47.90
1
A
LYS
188
-84.81
-72.94
1
A
SER
214
-124.61
-64.23
1
A
ARG
243
37.65
63.63
1
B
ARG
396
-89.09
-140.67
1
B
HIS
397
-148.10
-65.25
1
H
PHE
27
175.26
151.42
1
H
PRO
41
-37.16
114.74
1
H
ALA
88
170.43
170.77
A
1
H
ALA
100
-176.89
-177.19
1
H
SER
127
-89.89
-119.40
1
H
SER
132
-167.87
118.93
1
H
ASP
144
48.24
77.57
1
L
SER
30
56.76
-112.81
1
L
ALA
32
-77.37
48.91
1
L
PRO
40
-38.39
129.54
1
L
ALA
51
67.19
-40.43
1
L
ALA
84
-178.95
-171.42
1
L
ASN
138
33.47
92.20
1
L
ASN
152
70.95
-15.52
1
L
SER
156
-171.37
142.00
1
L
GLN
166
-39.29
135.40
PROTEIN_REP.PARAM
PROTEIN.TOP
CARBOHYDRATE.PARAM
CARBOHYDRATE.TOP
WATER_REP.PARAM
WATER.TOP
NAG.PAR
NAG.TOP
MAI.PAR
MAI.TOP
38.40
-2.23000
0.00000
0.00000
-5.28000
0.00000
7.51000
BULK SOLVENT MODEL USED
0.274
0.006
0.226
0.226
2.70
19.93
2388
24111
9.900
99.3
RANDOM
2076852.150
0.0000
1
RESTRAINED
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
PDB ENTRY 2WUB
FLAT MODEL
22.22
0.30
0.45
0.36
5.00
0.51
0.38
2.70
19.93
131
5319
28
0
5160
0.008
1.30
26.50
0.92
1
RESTRAINTS
1
X-RAY DIFFRACTION
0.3960
0.021
0.3220
2.87
370
3498
6
9.60
96.80
48.40
2.700
50.000
2WUC
24263
2.000
0.14000
1
15.0000
7.300
99.4
0.65000
2.70
2.80
2.900
1
7.40
97.3
refinement
CNS
1.2
data reduction
HKL-2000
data scaling
SCALA
phasing
PHENIX
Crystal structure of HGFA in complex with the allosteric non- inhibitory antibody Fab40.deltaTrp and Ac-KQLR-chloromethylketone
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
7
N
N
7
N
N
7
N
N
7
N
N
A
ALA
55
A
ALA
38
HELX_P
A
PHE
59
A
PHE
42
5
1
5
A
PRO
60
A
PRO
47
HELX_P
A
ASP
62
A
ASP
49
5
2
3
D
A
ALA
164
A
ALA
156
HELX_P
A
SER
169
A
SER
161
1
3
6
A
TYR
172
A
TYR
166
HELX_P
A
ILE
176
A
ILE
170
5
4
5
A
VAL
231
A
VAL
227
HELX_P
A
ASN
233
A
ASN
229
5
5
3
A
TYR
234
A
TYR
230
HELX_P
A
ARG
243
A
ARG
239
1
6
10
H
ASP
61
C
ASP
62
HELX_P
H
LYS
64
C
LYS
65
5
7
4
H
ARG
83
C
ARG
87
HELX_P
H
THR
87
C
THR
91
5
8
5
H
SER
156
C
SER
160
HELX_P
H
ALA
158
C
ALA
162
5
9
3
H
LYS
201
C
LYS
205
HELX_P
H
ASN
204
C
ASN
208
5
10
4
L
GLN
79
E
GLN
79
HELX_P
L
PHE
83
E
PHE
83
5
11
5
L
GLN
124
E
GLN
124
HELX_P
L
SER
127
E
SER
127
5
12
4
L
LYS
183
E
LYS
183
HELX_P
L
LYS
188
E
LYS
188
1
13
6
disulf
2.035
A
CYS
42
A
SG
CYS
25
1_555
A
CYS
58
A
SG
CYS
41
1_555
disulf
2.043
D
A
CYS
50
A
SG
CYS
33
1_555
A
CYS
111
A
SG
CYS
103
1_555
disulf
2.033
A
CYS
122
A
SG
CYS
114
1_555
B
CYS
393
B
SG
CYS
22
1_555
disulf
2.040
A
CYS
136
A
SG
CYS
128
1_555
A
CYS
201
A
SG
CYS
197
1_555
disulf
2.033
A
CYS
168
A
SG
CYS
160
1_555
A
CYS
182
A
SG
CYS
176
1_555
disulf
2.035
A
CYS
191
A
SG
CYS
187
1_555
A
CYS
220
A
SG
CYS
215
1_555
disulf
2.028
H
CYS
22
C
SG
CYS
22
1_555
H
CYS
92
C
SG
CYS
96
1_555
disulf
2.031
H
CYS
140
C
SG
CYS
144
1_555
H
CYS
196
C
SG
CYS
200
1_555
disulf
2.030
H
CYS
216
C
SG
CYS
220
1_555
L
CYS
214
E
SG
CYS
214
1_555
disulf
2.055
L
CYS
23
E
SG
CYS
23
1_555
L
CYS
88
E
SG
CYS
88
1_555
disulf
2.035
L
CYS
134
E
SG
CYS
134
1_555
L
CYS
194
E
SG
CYS
194
1_555
covale
1.426
one
A
HIS
57
A
NE2
HIS
40
1_555
I
0QE
6
D
C1
0QE
6
1_555
covale
1.521
one
N-Glycosylation
A
ASN
74
A
ND2
ASN
61
1_555
C
NAG
1
F
C1
NAG
1_555
covale
1.461
one
A
SER
195
A
OG
SER
191
1_555
I
AR7
5
D
C
AR7
5
1_555
covale
1.341
both
I
ACE
1
D
C
ACE
1
1_555
I
LYS
2
D
N
LYS
2
1_555
covale
1.329
both
I
LEU
4
D
C
LEU
4
1_555
I
AR7
5
D
N
AR7
5
1_555
covale
1.545
both
I
AR7
5
D
C
AR7
5
1_555
I
0QE
6
D
C1
0QE
6
1_555
covale
1.587
both
C
NAG
1
F
O4
NAG
1_555
C
NAG
2
F
C1
NAG
1_555
HYDROLASE/HYDROLASE INHIBITOR
SERINE PROTEASE, EGF-LIKE DOMAIN, ALLOSTERIC INHIBITOR, KRINGLE, ANTIBODY, HYDROLASE, FAB COMPLEX, GLYCOPROTEIN, IMMUNE SYSTEM, HYDROLASE-HYDROLASE INHIBITOR COMPLEX
H
PHE
146
C
PHE
150
1
H
PRO
147
C
PRO
151
0.08
H
GLU
148
C
GLU
152
1
H
PRO
149
C
PRO
153
0.70
L
SER
7
E
SER
7
1
L
PRO
8
E
PRO
8
-1.11
L
ALA
94
E
ALA
94
1
L
PRO
95
E
PRO
95
1.17
L
TYR
140
E
TYR
140
1
L
PRO
141
E
PRO
141
2.12
HGFA_HUMAN
UNP
1
Q04756
2WUC
PDB
1
2WUC
HGFA_HUMAN
UNP
2
Q04756
2WUC
PDB
3
2WUC
2WUC
PDB
4
2WUC
2WUC
PDB
5
2WUC
408
655
2WUC
16
251
Q04756
A
1
1
247
252
260
2WUC
252
260
2WUC
A
2
248
256
373
407
2WUC
372
406
Q04756
B
3
1
35
1
220
2WUC
1
220
2WUC
H
4
1
224
1
6
2WUC
1
6
2WUC
I
5
1
6
1
214
2WUC
1
214
2WUC
L
6
1
214
7
7
4
8
6
3
4
8
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
20
A
SER
5
A
SER
21
A
SER
6
A
ARG
156
A
ARG
148
A
PRO
161
A
PRO
153
A
LYS
135
A
LYS
127
A
GLY
140
A
GLY
132
A
PRO
198
A
PRO
194
A
LYS
203
A
LYS
199
A
VAL
206
A
VAL
202
A
TRP
215
A
TRP
211
A
GLY
226
A
GLY
222
A
THR
229
A
THR
225
A
MET
180
A
MET
174
A
ALA
183
A
ALA
177
A
LEU
30
A
LEU
15
A
ILE
35
A
ILE
20
A
SER
40
A
SER
23
A
HIS
48
A
HIS
31
A
TRP
51
A
TRP
34
A
SER
54
A
SER
37
A
VAL
104
A
VAL
92
A
LEU
108
A
LEU
96
A
GLN
81
A
GLN
68
A
PRO
90
A
PRO
77
A
VAL
64
A
VAL
51
A
LEU
68
A
LEU
55
A
LEU
30
A
LEU
15
A
ILE
35
A
ILE
20
H
GLN
3
C
GLN
3
H
SER
7
C
SER
7
H
LEU
18
C
LEU
18
H
SER
25
C
SER
25
H
THR
77
C
THR
78
H
MET
82
C
MET
83
H
PHE
67
C
PHE
68
H
ASP
72
C
ASP
73
H
GLY
10
C
GLY
10
H
VAL
12
C
VAL
12
H
THR
107
C
THR
111
H
VAL
111
C
VAL
115
H
ALA
88
C
ALA
92
H
TYR
91
C
TYR
95
H
TYR
33
C
TYR
33
H
GLN
39
C
GLN
39
H
ALA
56
C
ALA
57
H
TYR
59
C
TYR
60
H
GLU
46
C
GLU
46
H
TYR
52
C
TYR
52
H
LYS
94
C
LYS
98
H
TRP
95
C
TRP
99
H
TYR
33
C
TYR
33
H
GLN
39
C
GLN
39
H
SER
120
C
SER
124
H
LEU
124
C
LEU
128
H
THR
135
C
THR
139
H
TYR
145
C
TYR
149
H
TYR
176
C
TYR
180
H
PRO
185
C
PRO
189
H
VAL
163
C
VAL
167
H
THR
165
C
THR
169
H
VAL
169
C
VAL
173
H
LEU
170
C
LEU
174
H
TYR
176
C
TYR
180
H
PRO
185
C
PRO
189
H
THR
151
C
THR
155
H
TRP
154
C
TRP
158
H
TYR
194
C
TYR
198
H
HIS
200
C
HIS
204
H
THR
205
C
THR
209
H
VAL
211
C
VAL
215
L
MET
4
E
MET
4
L
SER
7
E
SER
7
L
VAL
19
E
VAL
19
L
ALA
25
E
ALA
25
L
ASP
70
E
ASP
70
L
ILE
75
E
ILE
75
L
PHE
62
E
PHE
62
L
GLY
66
E
GLY
66
L
SER
10
E
SER
10
L
SER
14
E
SER
14
L
THR
102
E
THR
102
L
LYS
107
E
LYS
107
L
ALA
84
E
ALA
84
L
GLN
90
E
GLN
90
L
PHE
53
E
PHE
53
L
LEU
54
E
LEU
54
L
LYS
45
E
LYS
45
L
TYR
49
E
TYR
49
L
VAL
33
E
VAL
33
L
GLN
38
E
GLN
38
L
THR
97
E
THR
97
L
PHE
98
E
PHE
98
L
ALA
84
E
ALA
84
L
GLN
90
E
GLN
90
L
SER
114
E
SER
114
L
PHE
118
E
PHE
118
L
THR
129
E
THR
129
L
PHE
139
E
PHE
139
L
TYR
173
E
TYR
173
L
SER
182
E
SER
182
L
SER
159
E
SER
159
L
VAL
163
E
VAL
163
L
ALA
153
E
ALA
153
L
LEU
154
E
LEU
154
L
LYS
145
E
LYS
145
L
VAL
150
E
VAL
150
L
VAL
191
E
VAL
191
L
THR
197
E
THR
197
L
VAL
205
E
VAL
205
L
ASN
210
E
ASN
210
20
C 2 2 21