0.016835 0.000000 0.004754 0.000000 0.014954 0.000000 0.000000 0.000000 0.013336 0.00000 0.00000 0.00000 Perez-Dorado, I. Sanles, R. Hermoso, J.A. Gonzalez, A. Garcia, A. Garcia, P. Garcia, J.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 105.77 90.00 59.400 66.870 77.920 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H14 N O 1 104.171 CHOLINE ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C11 H19 N O8 293.270 N-acetyl-alpha-muramic acid N-acetyl-muramic acid; N-ACETYLMURAMIC ACID D-saccharide, alpha linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N C N 76 N C N 77 N C N 78 N C N 79 N O N 80 N N N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N C N 102 N O N 103 N N N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N O N 123 N O N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N N N 135 N C N 136 N C N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N C N 145 N O N 146 N C N 147 N O N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 N C Y 163 N C Y 164 N N Y 165 N C Y 166 N C Y 167 N N N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N H N 181 N H N 182 N N N 183 S C N 184 N C N 185 N O N 186 S C N 187 N C N 188 N C N 189 N C N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 S C N 206 N C N 207 N O N 208 N C N 209 N C N 210 N C N 211 N C N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N N N 227 S C N 228 N C N 229 N O N 230 N C N 231 N C N 232 N C N 233 N C N 234 N N N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N S N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 S C N 272 R C N 273 R C N 274 S C N 275 R C N 276 N C N 277 N C N 278 N C N 279 R C N 280 N C N 281 N C N 282 N O N 283 N O N 284 N O N 285 N O N 286 N O N 287 N O N 288 N O N 289 N O N 290 N N N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 R C N 311 R C N 312 R C N 313 S C N 314 R C N 315 N C N 316 N C N 317 N C N 318 N N N 319 N O N 320 N O N 321 N O N 322 N O N 323 N O N 324 N O N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C Y 349 N C Y 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N C N 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 R C N 399 N O N 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N N Y 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C N 449 N O N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C N 467 N C N 468 N C N 469 N O N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing Y 160 N sing Y 161 N doub Y 162 N doub N 163 N sing Y 164 N sing N 165 N sing Y 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing Y 337 N doub Y 338 N sing Y 339 N sing N 340 N sing Y 341 N doub N 342 N sing Y 343 N doub N 344 N sing Y 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing Y 406 N doub Y 407 N sing Y 408 N sing N 409 N sing Y 410 N doub Y 411 N sing Y 412 N sing N 413 N sing Y 414 N sing Y 415 N doub N 416 N sing Y 417 N doub N 418 N sing Y 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N doub N 430 N sing N 431 N sing N 432 N sing N 433 N sing Y 434 N doub Y 435 N sing Y 436 N sing N 437 N sing Y 438 N doub N 439 N sing Y 440 N doub N 441 N sing Y 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N doub N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing US Nat.Struct.Mol.Biol. 1545-9993 17 576 10.1038/NSMB.1817 20400948 Insights Into Pneumococcal Fratricide from the Crystal Structures of the Modular Killing Factor Lytc. 2010 US J.Biol.Chem. JBCHA3 0071 0021-9258 283 28618 10.1074/JBC.M802808200 18667432 Insights Into the Structure-Function Relationships of Pneumococcal Cell Wall Lysozymes, Lytc and Cpl- 1. 2008 UK Biochem.J. BIJOAK 0043 0264-6021 391 41 10.1042/BJ20050612 15943581 Unravelling the Structure of the Pneumococcal Autolytic Lysozyme. 2005 UK Mol.Microbiol. MOMIEE 2007 0950-382X 33 128 10411730 The Molecular Characterization of the First Autolytic Lysozyme of Streptococcus Pneumoniae Reveals Evolutionary Mobile Domains. 1999 10.2210/pdb2wwd/pdb pdb_00002wwd GLN A 618 HAS WRONG CHIRALITY AT ATOM CA 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2008-07-14 ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.9795 1.0 ID14-4 ESRF 0.9795 SYNCHROTRON ESRF BEAMLINE ID14-4 55270.633 1,4-BETA-N-ACETYLMURAMIDASE 3.2.1.17 1 man polymer 496.463 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid 1 man branched 92.094 GLYCEROL 7 syn non-polymer 104.171 CHOLINE ION 7 syn non-polymer 89.093 ALANINE 1 syn non-polymer 146.144 GLUTAMINE 1 syn non-polymer 18.015 water 136 nat water LYTC AUTOLYSIN no no NETEVAKTSQDTTTASSSSEQNQSSNKTQTSAEVQTNAAAYWDGDYYVKDDGSKAQSEWIFDNYYKAWFYINSDGRYSQN EWHGNYYLKSGGYMAQNEWIYDSNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKWGYMAKSQWQGSYFLNGQGAMIQNEW LYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGAMATDEVIMDGARYIFAASGELKEKK DLNVGWVHRDGKRYFFNNREEQVGTEHAKKIIDISEHNGRINDWKKVIDENEVDGVIVRLGYSGKEDKELAHNIKELNRL GIPYGVYLYTYAENETDAENDAKQTIELIKKYNMNLSYPIYYDVENWEYVNKSKRAPSDTDTWVKIINKYMDTMKQAGYQ NVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPYYSGEKGWQYTSSEYMKGIQGRVDVSVWY NETEVAKTSQDTTTASSSSEQNQSSNKTQTSAEVQTNAAAYWDGDYYVKDDGSKAQSEWIFDNYYKAWFYINSDGRYSQN EWHGNYYLKSGGYMAQNEWIYDSNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKWGYMAKSQWQGSYFLNGQGAMIQNEW LYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGAMATDEVIMDGARYIFAASGELKEKK DLNVGWVHRDGKRYFFNNREEQVGTEHAKKIIDISEHNGRINDWKKVIDENEVDGVIVRLGYSGKEDKELAHNIKELNRL GIPYGVYLYTYAENETDAENDAKQTIELIKKYNMNLSYPIYYDVENWEYVNKSKRAPSDTDTWVKIINKYMDTMKQAGYQ NVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPYYSGEKGWQYTSSEYMKGIQGRVDVSVWY A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n R6 sample 171101 STREPTOCOCCUS PNEUMONIAE 511693 ESCHERICHIA COLI BL21 PLASMID PLCC14 1 2.74 55.1 NONE atom_site chem_comp database_PDB_caveat entity pdbx_database_status pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_unobs_or_zero_occ_atoms pdbx_validate_chiral struct_asym struct_conn struct_site struct_site_gen atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_unobs_or_zero_occ_atoms struct_asym struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_sheet repository Initial release Carbohydrate remediation repository Remediation Advisory Version format compliance Database references Derived calculations Non-polymer description Advisory Atomic model Data collection Derived calculations Non-polymer description Other Structure summary Advisory Atomic model Data collection Derived calculations Structure summary Data collection Database references Derived calculations Refinement description Structure summary 1 0 2010-04-21 1 1 2011-07-13 1 2 2013-04-03 2 0 2020-07-01 3 0 2020-07-29 3 1 2023-12-20 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.occupancy _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.name _chem_comp.type _pdbx_database_status.status_code_sf _pdbx_struct_assembly_gen.asym_id_list _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _struct_site.pdbx_num_residues _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.name _pdbx_struct_assembly_gen.asym_id_list _pdbx_unobs_or_zero_occ_atoms.label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_sheet.number_strands A MU2 470 n B MUB 1 A NAG 469 n B NAG 2 a-D-GlcpNAc3<C3O2> MurNAc DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc 3D-STRUCTURE OF THE MODULAR AUTOLYSIN LYTC FROM STREPTOCOCCUS PNEUMONIAE AT 1.6 A RESOLUTION 3D-STRUCTURE OF THE MODULAR AUTOLYSIN LYTC FROM STREPTOCOCCUS PNEUMONIAE IN COMPLEX WITH SYNTHETIC PEPTIDOGLYCAN LIGAND SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AL" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. PDBE Y PDBE 2009-10-22 REL REL oligosaccharide DGlcpNAcb1-4MurNAc1-ROH 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*NCC/3=O_3*OC^RCO/4=O/3C][a2122h-1b_1-5_2*NCC/3=O]/1-2/a4-b1 2 PDB2Glycan 1.1.0 WURCS [][a-D-GlcpNAc]{[(3+1)][&lt;C3O1&gt;]{}[(4+1)][b-D-GlcpNAc]{}} 2 PDB-CARE LINUCS C1 O4 NAG MUB 2 1 2 O1 HO4 sing n n GOL GLYCEROL CHT CHOLINE ION ALA ALANINE GLN GLUTAMINE HOH water ENTRY ACCESSION CODE CORRESPONDS TO THE IMMATURE PROTEIN WHICH POSSESSES A SIGNAL PEPTIDE OF 33 AMINO-ACIDS BUT THE STRUCTURE HERE REPORTED CORRESPONDS TO THE MATURE FORM. THE FIRST AMINO-ACID OF THE MATURE PROTEIN IS REFERED AS TO RESIDUE 1. 2WW5 PDB ENTRY 2WW5 PDB experimental model GOL 601 3 GOL GOL 601 A GOL 602 3 GOL GOL 602 A GOL 603 3 GOL GOL 603 A GOL 604 3 GOL GOL 604 A GOL 605 3 GOL GOL 605 A GOL 606 3 GOL GOL 606 A GOL 607 3 GOL GOL 607 A CHT 701 4 CHT CHT 608 A CHT 702 4 CHT CHT 609 A CHT 703 4 CHT CHT 610 A CHT 704 4 CHT CHT 611 A CHT 705 4 CHT CHT 612 A CHT 706 4 CHT CHT 613 A CHT 707 4 CHT CHT 614 A MU2 470 5 ALA ALA 617 A MU2 470 6 GLN GLN 618 A HOH 2048 7 HOH HOH 701 A HOH 2020 7 HOH HOH 702 A HOH 2010 7 HOH HOH 703 A HOH 2110 7 HOH HOH 704 A HOH 2103 7 HOH HOH 705 A HOH 2038 7 HOH HOH 706 A HOH 2105 7 HOH HOH 707 A HOH 2124 7 HOH HOH 708 A HOH 2116 7 HOH HOH 709 A HOH 2101 7 HOH HOH 710 A HOH 2091 7 HOH HOH 711 A HOH 2054 7 HOH HOH 712 A HOH 2034 7 HOH HOH 713 A HOH 2072 7 HOH HOH 714 A HOH 2065 7 HOH HOH 715 A HOH 2067 7 HOH HOH 716 A HOH 2104 7 HOH HOH 717 A HOH 2064 7 HOH HOH 718 A HOH 2135 7 HOH HOH 719 A HOH 2017 7 HOH HOH 720 A HOH 2107 7 HOH HOH 721 A HOH 2039 7 HOH HOH 722 A HOH 2005 7 HOH HOH 723 A HOH 2083 7 HOH HOH 724 A HOH 2071 7 HOH HOH 725 A HOH 2044 7 HOH HOH 726 A HOH 2026 7 HOH HOH 727 A HOH 2078 7 HOH HOH 728 A HOH 2098 7 HOH HOH 729 A HOH 2096 7 HOH HOH 730 A HOH 2059 7 HOH HOH 731 A HOH 2040 7 HOH HOH 732 A HOH 2035 7 HOH HOH 733 A HOH 2115 7 HOH HOH 734 A HOH 2075 7 HOH HOH 735 A HOH 2095 7 HOH HOH 736 A HOH 2077 7 HOH HOH 737 A HOH 2045 7 HOH HOH 738 A HOH 2004 7 HOH HOH 739 A HOH 2066 7 HOH HOH 740 A HOH 2051 7 HOH HOH 741 A HOH 2090 7 HOH HOH 742 A HOH 2126 7 HOH HOH 743 A HOH 2027 7 HOH HOH 744 A HOH 2073 7 HOH HOH 745 A HOH 2016 7 HOH HOH 746 A HOH 2023 7 HOH HOH 747 A HOH 2120 7 HOH HOH 748 A HOH 2001 7 HOH HOH 749 A HOH 2130 7 HOH HOH 750 A HOH 2018 7 HOH HOH 751 A HOH 2089 7 HOH HOH 752 A HOH 2114 7 HOH HOH 753 A HOH 2118 7 HOH HOH 754 A HOH 2011 7 HOH HOH 755 A HOH 2081 7 HOH HOH 756 A HOH 2117 7 HOH HOH 757 A HOH 2012 7 HOH HOH 758 A HOH 2062 7 HOH HOH 759 A HOH 2070 7 HOH HOH 760 A HOH 2041 7 HOH HOH 761 A HOH 2136 7 HOH HOH 762 A HOH 2019 7 HOH HOH 763 A HOH 2022 7 HOH HOH 764 A HOH 2084 7 HOH HOH 765 A HOH 2076 7 HOH HOH 766 A HOH 2042 7 HOH HOH 767 A HOH 2025 7 HOH HOH 768 A HOH 2125 7 HOH HOH 769 A HOH 2015 7 HOH HOH 770 A HOH 2112 7 HOH HOH 771 A HOH 2049 7 HOH HOH 772 A HOH 2133 7 HOH HOH 773 A HOH 2008 7 HOH HOH 774 A HOH 2131 7 HOH HOH 775 A HOH 2119 7 HOH HOH 776 A HOH 2092 7 HOH HOH 777 A HOH 2043 7 HOH HOH 778 A HOH 2123 7 HOH HOH 779 A HOH 2099 7 HOH HOH 780 A HOH 2087 7 HOH HOH 781 A HOH 2006 7 HOH HOH 782 A HOH 2028 7 HOH HOH 783 A HOH 2132 7 HOH HOH 784 A HOH 2109 7 HOH HOH 785 A HOH 2021 7 HOH HOH 786 A HOH 2079 7 HOH HOH 787 A HOH 2030 7 HOH HOH 788 A HOH 2013 7 HOH HOH 789 A HOH 2056 7 HOH HOH 790 A HOH 2097 7 HOH HOH 791 A HOH 2121 7 HOH HOH 792 A HOH 2108 7 HOH HOH 793 A HOH 2127 7 HOH HOH 794 A HOH 2060 7 HOH HOH 795 A HOH 2033 7 HOH HOH 796 A HOH 2046 7 HOH HOH 797 A HOH 2055 7 HOH HOH 798 A HOH 2053 7 HOH HOH 799 A HOH 2094 7 HOH HOH 800 A HOH 2088 7 HOH HOH 801 A HOH 2086 7 HOH HOH 802 A HOH 2037 7 HOH HOH 803 A HOH 2100 7 HOH HOH 804 A HOH 2003 7 HOH HOH 805 A HOH 2122 7 HOH HOH 806 A HOH 2074 7 HOH HOH 807 A HOH 2068 7 HOH HOH 808 A HOH 2082 7 HOH HOH 809 A HOH 2002 7 HOH HOH 810 A HOH 2058 7 HOH HOH 811 A HOH 2047 7 HOH HOH 812 A HOH 2106 7 HOH HOH 813 A HOH 2032 7 HOH HOH 814 A HOH 2029 7 HOH HOH 815 A HOH 2134 7 HOH HOH 816 A HOH 2061 7 HOH HOH 817 A HOH 2129 7 HOH HOH 818 A HOH 2014 7 HOH HOH 819 A HOH 2031 7 HOH HOH 820 A HOH 2063 7 HOH HOH 821 A HOH 2052 7 HOH HOH 822 A HOH 2111 7 HOH HOH 823 A HOH 2009 7 HOH HOH 824 A HOH 2093 7 HOH HOH 825 A HOH 2128 7 HOH HOH 826 A HOH 2085 7 HOH HOH 827 A HOH 2024 7 HOH HOH 828 A HOH 2036 7 HOH HOH 829 A HOH 2080 7 HOH HOH 830 A HOH 2113 7 HOH HOH 831 A HOH 2102 7 HOH HOH 832 A HOH 2050 7 HOH HOH 833 A HOH 2007 7 HOH HOH 834 A HOH 2069 7 HOH HOH 835 A HOH 2057 7 HOH HOH 836 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A n 13 13 A n 14 14 A n 15 15 A n 16 16 A n 17 17 A n 18 18 A n 19 19 A n 20 20 A n 21 21 A n 22 22 A n 23 23 A n 24 24 A n 25 25 A n 26 26 A n 27 27 A n 28 28 A n 29 29 A n 30 30 A n 31 31 A n 32 32 A n 33 33 A n 34 34 A n 35 35 A n 36 36 A ASN 37 n 37 ASN 37 A ALA 38 n 38 ALA 38 A ALA 39 n 39 ALA 39 A ALA 40 n 40 ALA 40 A TYR 41 n 41 TYR 41 A TRP 42 n 42 TRP 42 A ASP 43 n 43 ASP 43 A GLY 44 n 44 GLY 44 A ASP 45 n 45 ASP 45 A TYR 46 n 46 TYR 46 A TYR 47 n 47 TYR 47 A VAL 48 n 48 VAL 48 A LYS 49 n 49 LYS 49 A ASP 50 n 50 ASP 50 A ASP 51 n 51 ASP 51 A GLY 52 n 52 GLY 52 A SER 53 n 53 SER 53 A LYS 54 n 54 LYS 54 A ALA 55 n 55 ALA 55 A GLN 56 n 56 GLN 56 A SER 57 n 57 SER 57 A GLU 58 n 58 GLU 58 A TRP 59 n 59 TRP 59 A ILE 60 n 60 ILE 60 A PHE 61 n 61 PHE 61 A ASP 62 n 62 ASP 62 A ASN 63 n 63 ASN 63 A TYR 64 n 64 TYR 64 A TYR 65 n 65 TYR 65 A LYS 66 n 66 LYS 66 A ALA 67 n 67 ALA 67 A TRP 68 n 68 TRP 68 A PHE 69 n 69 PHE 69 A TYR 70 n 70 TYR 70 A ILE 71 n 71 ILE 71 A ASN 72 n 72 ASN 72 A SER 73 n 73 SER 73 A ASP 74 n 74 ASP 74 A GLY 75 n 75 GLY 75 A ARG 76 n 76 ARG 76 A TYR 77 n 77 TYR 77 A SER 78 n 78 SER 78 A GLN 79 n 79 GLN 79 A ASN 80 n 80 ASN 80 A GLU 81 n 81 GLU 81 A TRP 82 n 82 TRP 82 A HIS 83 n 83 HIS 83 A GLY 84 n 84 GLY 84 A ASN 85 n 85 ASN 85 A TYR 86 n 86 TYR 86 A TYR 87 n 87 TYR 87 A LEU 88 n 88 LEU 88 A LYS 89 n 89 LYS 89 A SER 90 n 90 SER 90 A GLY 91 n 91 GLY 91 A GLY 92 n 92 GLY 92 A TYR 93 n 93 TYR 93 A MET 94 n 94 MET 94 A ALA 95 n 95 ALA 95 A GLN 96 n 96 GLN 96 A ASN 97 n 97 ASN 97 A GLU 98 n 98 GLU 98 A TRP 99 n 99 TRP 99 A ILE 100 n 100 ILE 100 A TYR 101 n 101 TYR 101 A ASP 102 n 102 ASP 102 A SER 103 n 103 SER 103 A ASN 104 n 104 ASN 104 A TYR 105 n 105 TYR 105 A LYS 106 n 106 LYS 106 A SER 107 n 107 SER 107 A TRP 108 n 108 TRP 108 A PHE 109 n 109 PHE 109 A TYR 110 n 110 TYR 110 A LEU 111 n 111 LEU 111 A LYS 112 n 112 LYS 112 A SER 113 n 113 SER 113 A ASP 114 n 114 ASP 114 A GLY 115 n 115 GLY 115 A ALA 116 n 116 ALA 116 A TYR 117 n 117 TYR 117 A ALA 118 n 118 ALA 118 A HIS 119 n 119 HIS 119 A GLN 120 n 120 GLN 120 A GLU 121 n 121 GLU 121 A TRP 122 n 122 TRP 122 A GLN 123 n 123 GLN 123 A LEU 124 n 124 LEU 124 A ILE 125 n 125 ILE 125 A GLY 126 n 126 GLY 126 A ASN 127 n 127 ASN 127 A LYS 128 n 128 LYS 128 A TRP 129 n 129 TRP 129 A TYR 130 n 130 TYR 130 A TYR 131 n 131 TYR 131 A PHE 132 n 132 PHE 132 A LYS 133 n 133 LYS 133 A LYS 134 n 134 LYS 134 A TRP 135 n 135 TRP 135 A GLY 136 n 136 GLY 136 A TYR 137 n 137 TYR 137 A MET 138 n 138 MET 138 A ALA 139 n 139 ALA 139 A LYS 140 n 140 LYS 140 A SER 141 n 141 SER 141 A GLN 142 n 142 GLN 142 A TRP 143 n 143 TRP 143 A GLN 144 n 144 GLN 144 A GLY 145 n 145 GLY 145 A SER 146 n 146 SER 146 A TYR 147 n 147 TYR 147 A PHE 148 n 148 PHE 148 A LEU 149 n 149 LEU 149 A ASN 150 n 150 ASN 150 A GLY 151 n 151 GLY 151 A GLN 152 n 152 GLN 152 A GLY 153 n 153 GLY 153 A ALA 154 n 154 ALA 154 A MET 155 n 155 MET 155 A ILE 156 n 156 ILE 156 A GLN 157 n 157 GLN 157 A ASN 158 n 158 ASN 158 A GLU 159 n 159 GLU 159 A TRP 160 n 160 TRP 160 A LEU 161 n 161 LEU 161 A TYR 162 n 162 TYR 162 A ASP 163 n 163 ASP 163 A PRO 164 n 164 PRO 164 A ALA 165 n 165 ALA 165 A TYR 166 n 166 TYR 166 A SER 167 n 167 SER 167 A ALA 168 n 168 ALA 168 A TYR 169 n 169 TYR 169 A PHE 170 n 170 PHE 170 A TYR 171 n 171 TYR 171 A LEU 172 n 172 LEU 172 A LYS 173 n 173 LYS 173 A SER 174 n 174 SER 174 A ASP 175 n 175 ASP 175 A GLY 176 n 176 GLY 176 A THR 177 n 177 THR 177 A TYR 178 n 178 TYR 178 A ALA 179 n 179 ALA 179 A ASN 180 n 180 ASN 180 A GLN 181 n 181 GLN 181 A GLU 182 n 182 GLU 182 A TRP 183 n 183 TRP 183 A GLN 184 n 184 GLN 184 A LYS 185 n 185 LYS 185 A VAL 186 n 186 VAL 186 A GLY 187 n 187 GLY 187 A GLY 188 n 188 GLY 188 A LYS 189 n 189 LYS 189 A TRP 190 n 190 TRP 190 A TYR 191 n 191 TYR 191 A TYR 192 n 192 TYR 192 A PHE 193 n 193 PHE 193 A LYS 194 n 194 LYS 194 A LYS 195 n 195 LYS 195 A TRP 196 n 196 TRP 196 A GLY 197 n 197 GLY 197 A TYR 198 n 198 TYR 198 A MET 199 n 199 MET 199 A ALA 200 n 200 ALA 200 A ARG 201 n 201 ARG 201 A ASN 202 n 202 ASN 202 A GLU 203 n 203 GLU 203 A TRP 204 n 204 TRP 204 A GLN 205 n 205 GLN 205 A GLY 206 n 206 GLY 206 A ASN 207 n 207 ASN 207 A TYR 208 n 208 TYR 208 A TYR 209 n 209 TYR 209 A LEU 210 n 210 LEU 210 A THR 211 n 211 THR 211 A GLY 212 n 212 GLY 212 A SER 213 n 213 SER 213 A GLY 214 n 214 GLY 214 A ALA 215 n 215 ALA 215 A MET 216 n 216 MET 216 A ALA 217 n 217 ALA 217 A THR 218 n 218 THR 218 A ASP 219 n 219 ASP 219 A GLU 220 n 220 GLU 220 A VAL 221 n 221 VAL 221 A ILE 222 n 222 ILE 222 A MET 223 n 223 MET 223 A ASP 224 n 224 ASP 224 A GLY 225 n 225 GLY 225 A ALA 226 n 226 ALA 226 A ARG 227 n 227 ARG 227 A TYR 228 n 228 TYR 228 A ILE 229 n 229 ILE 229 A PHE 230 n 230 PHE 230 A ALA 231 n 231 ALA 231 A ALA 232 n 232 ALA 232 A SER 233 n 233 SER 233 A GLY 234 n 234 GLY 234 A GLU 235 n 235 GLU 235 A LEU 236 n 236 LEU 236 A LYS 237 n 237 LYS 237 A GLU 238 n 238 GLU 238 A LYS 239 n 239 LYS 239 A LYS 240 n 240 LYS 240 A ASP 241 n 241 ASP 241 A LEU 242 n 242 LEU 242 A ASN 243 n 243 ASN 243 A VAL 244 n 244 VAL 244 A GLY 245 n 245 GLY 245 A TRP 246 n 246 TRP 246 A VAL 247 n 247 VAL 247 A HIS 248 n 248 HIS 248 A ARG 249 n 249 ARG 249 A ASP 250 n 250 ASP 250 A GLY 251 n 251 GLY 251 A LYS 252 n 252 LYS 252 A ARG 253 n 253 ARG 253 A TYR 254 n 254 TYR 254 A PHE 255 n 255 PHE 255 A PHE 256 n 256 PHE 256 A ASN 257 n 257 ASN 257 A ASN 258 n 258 ASN 258 A ARG 259 n 259 ARG 259 A GLU 260 n 260 GLU 260 A GLU 261 n 261 GLU 261 A GLN 262 n 262 GLN 262 A VAL 263 n 263 VAL 263 A GLY 264 n 264 GLY 264 A THR 265 n 265 THR 265 A GLU 266 n 266 GLU 266 A HIS 267 n 267 HIS 267 A ALA 268 n 268 ALA 268 A LYS 269 n 269 LYS 269 A LYS 270 n 270 LYS 270 A ILE 271 n 271 ILE 271 A ILE 272 n 272 ILE 272 A ASP 273 n 273 ASP 273 A ILE 274 n 274 ILE 274 A SER 275 n 275 SER 275 A GLU 276 n 276 GLU 276 A HIS 277 n 277 HIS 277 A ASN 278 n 278 ASN 278 A GLY 279 n 279 GLY 279 A ARG 280 n 280 ARG 280 A ILE 281 n 281 ILE 281 A ASN 282 n 282 ASN 282 A ASP 283 n 283 ASP 283 A TRP 284 n 284 TRP 284 A LYS 285 n 285 LYS 285 A LYS 286 n 286 LYS 286 A VAL 287 n 287 VAL 287 A ILE 288 n 288 ILE 288 A ASP 289 n 289 ASP 289 A GLU 290 n 290 GLU 290 A ASN 291 n 291 ASN 291 A GLU 292 n 292 GLU 292 A VAL 293 n 293 VAL 293 A ASP 294 n 294 ASP 294 A GLY 295 n 295 GLY 295 A VAL 296 n 296 VAL 296 A ILE 297 n 297 ILE 297 A VAL 298 n 298 VAL 298 A ARG 299 n 299 ARG 299 A LEU 300 n 300 LEU 300 A GLY 301 n 301 GLY 301 A TYR 302 n 302 TYR 302 A SER 303 n 303 SER 303 A GLY 304 n 304 GLY 304 A LYS 305 n 305 LYS 305 A GLU 306 n 306 GLU 306 A ASP 307 n 307 ASP 307 A LYS 308 n 308 LYS 308 A GLU 309 n 309 GLU 309 A LEU 310 n 310 LEU 310 A ALA 311 n 311 ALA 311 A HIS 312 n 312 HIS 312 A ASN 313 n 313 ASN 313 A ILE 314 n 314 ILE 314 A LYS 315 n 315 LYS 315 A GLU 316 n 316 GLU 316 A LEU 317 n 317 LEU 317 A ASN 318 n 318 ASN 318 A ARG 319 n 319 ARG 319 A LEU 320 n 320 LEU 320 A GLY 321 n 321 GLY 321 A ILE 322 n 322 ILE 322 A PRO 323 n 323 PRO 323 A TYR 324 n 324 TYR 324 A GLY 325 n 325 GLY 325 A VAL 326 n 326 VAL 326 A TYR 327 n 327 TYR 327 A LEU 328 n 328 LEU 328 A TYR 329 n 329 TYR 329 A THR 330 n 330 THR 330 A TYR 331 n 331 TYR 331 A ALA 332 n 332 ALA 332 A GLU 333 n 333 GLU 333 A ASN 334 n 334 ASN 334 A GLU 335 n 335 GLU 335 A THR 336 n 336 THR 336 A ASP 337 n 337 ASP 337 A ALA 338 n 338 ALA 338 A GLU 339 n 339 GLU 339 A ASN 340 n 340 ASN 340 A ASP 341 n 341 ASP 341 A ALA 342 n 342 ALA 342 A LYS 343 n 343 LYS 343 A GLN 344 n 344 GLN 344 A THR 345 n 345 THR 345 A ILE 346 n 346 ILE 346 A GLU 347 n 347 GLU 347 A LEU 348 n 348 LEU 348 A ILE 349 n 349 ILE 349 A LYS 350 n 350 LYS 350 A LYS 351 n 351 LYS 351 A TYR 352 n 352 TYR 352 A ASN 353 n 353 ASN 353 A MET 354 n 354 MET 354 A ASN 355 n 355 ASN 355 A LEU 356 n 356 LEU 356 A SER 357 n 357 SER 357 A TYR 358 n 358 TYR 358 A PRO 359 n 359 PRO 359 A ILE 360 n 360 ILE 360 A TYR 361 n 361 TYR 361 A TYR 362 n 362 TYR 362 A ASP 363 n 363 ASP 363 A VAL 364 n 364 VAL 364 A GLU 365 n 365 GLU 365 A ASN 366 n 366 ASN 366 A TRP 367 n 367 TRP 367 A GLU 368 n 368 GLU 368 A TYR 369 n 369 TYR 369 A VAL 370 n 370 VAL 370 A ASN 371 n 371 ASN 371 A LYS 372 n 372 LYS 372 A SER 373 n 373 SER 373 A LYS 374 n 374 LYS 374 A ARG 375 n 375 ARG 375 A ALA 376 n 376 ALA 376 A PRO 377 n 377 PRO 377 A SER 378 n 378 SER 378 A ASP 379 n 379 ASP 379 A THR 380 n 380 THR 380 A ASP 381 n 381 ASP 381 A THR 382 n 382 THR 382 A TRP 383 n 383 TRP 383 A VAL 384 n 384 VAL 384 A LYS 385 n 385 LYS 385 A ILE 386 n 386 ILE 386 A ILE 387 n 387 ILE 387 A ASN 388 n 388 ASN 388 A LYS 389 n 389 LYS 389 A TYR 390 n 390 TYR 390 A MET 391 n 391 MET 391 A ASP 392 n 392 ASP 392 A THR 393 n 393 THR 393 A MET 394 n 394 MET 394 A LYS 395 n 395 LYS 395 A GLN 396 n 396 GLN 396 A ALA 397 n 397 ALA 397 A GLY 398 n 398 GLY 398 A TYR 399 n 399 TYR 399 A GLN 400 n 400 GLN 400 A ASN 401 n 401 ASN 401 A VAL 402 n 402 VAL 402 A TYR 403 n 403 TYR 403 A VAL 404 n 404 VAL 404 A TYR 405 n 405 TYR 405 A SER 406 n 406 SER 406 A TYR 407 n 407 TYR 407 A ARG 408 n 408 ARG 408 A SER 409 n 409 SER 409 A LEU 410 n 410 LEU 410 A LEU 411 n 411 LEU 411 A GLN 412 n 412 GLN 412 A THR 413 n 413 THR 413 A ARG 414 n 414 ARG 414 A LEU 415 n 415 LEU 415 A LYS 416 n 416 LYS 416 A HIS 417 n 417 HIS 417 A PRO 418 n 418 PRO 418 A ASP 419 n 419 ASP 419 A ILE 420 n 420 ILE 420 A LEU 421 n 421 LEU 421 A LYS 422 n 422 LYS 422 A HIS 423 n 423 HIS 423 A VAL 424 n 424 VAL 424 A ASN 425 n 425 ASN 425 A TRP 426 n 426 TRP 426 A VAL 427 n 427 VAL 427 A ALA 428 n 428 ALA 428 A ALA 429 n 429 ALA 429 A TYR 430 n 430 TYR 430 A THR 431 n 431 THR 431 A ASN 432 n 432 ASN 432 A ALA 433 n 433 ALA 433 A LEU 434 n 434 LEU 434 A GLU 435 n 435 GLU 435 A TRP 436 n 436 TRP 436 A GLU 437 n 437 GLU 437 A ASN 438 n 438 ASN 438 A PRO 439 n 439 PRO 439 A TYR 440 n 440 TYR 440 A TYR 441 n 441 TYR 441 A SER 442 n 442 SER 442 A GLY 443 n 443 GLY 443 A GLU 444 n 444 GLU 444 A LYS 445 n 445 LYS 445 A GLY 446 n 446 GLY 446 A TRP 447 n 447 TRP 447 A GLN 448 n 448 GLN 448 A TYR 449 n 449 TYR 449 A THR 450 n 450 THR 450 A SER 451 n 451 SER 451 A SER 452 n 452 SER 452 A GLU 453 n 453 GLU 453 A TYR 454 n 454 TYR 454 A MET 455 n 455 MET 455 A LYS 456 n 456 LYS 456 A GLY 457 n 457 GLY 457 A ILE 458 n 458 ILE 458 A GLN 459 n 459 GLN 459 A GLY 460 n 460 GLY 460 A ARG 461 n 461 ARG 461 A VAL 462 n 462 VAL 462 A ASP 463 n 463 ASP 463 A VAL 464 n 464 VAL 464 A SER 465 n 465 SER 465 A VAL 466 n 466 VAL 466 A TRP 467 n 467 TRP 467 A TYR 468 n 468 TYR 468 A 1.4282 -1.2355 -0.7335 4.0716 0.1858 3.7297 -0.0663 0.1623 -0.0304 0.3172 0.1602 -0.0195 0.2591 0.1184 -0.0938 0.0382 -0.0273 -0.0006 -0.0326 -0.0479 -0.0848 refined 31.3182 -53.4008 3.5460 X-RAY DIFFRACTION 0.2619 0.6412 0.1485 2.3662 0.9195 0.4722 -0.0588 -0.0331 0.0435 -0.1201 0.0700 0.0609 0.0182 0.0197 -0.0112 0.0209 -0.0344 -0.0320 -0.0374 -0.0020 -0.0175 refined 31.5136 -16.2703 18.3963 X-RAY DIFFRACTION 5.9565 -5.6482 -5.2786 11.4282 8.5951 10.3428 -0.0234 -0.0059 0.3414 -0.1347 -0.6668 0.9701 -0.1516 -0.0861 0.6903 -0.1437 -0.0589 -0.0350 -0.0625 -0.1624 0.2304 refined 33.7124 21.7035 28.5084 X-RAY DIFFRACTION 7.4975 0.4970 -1.4500 2.7944 -0.0155 3.1545 0.5791 -0.3526 0.8101 0.2118 -0.2556 -0.0134 -0.4455 0.2864 -0.3234 -0.0329 -0.0632 0.1402 -0.1221 -0.0332 0.1414 refined 14.8410 31.1129 33.0489 X-RAY DIFFRACTION 1.8615 0.3784 0.2693 0.4488 0.1732 0.8365 0.0254 0.1954 -0.1032 -0.0244 0.0215 -0.0593 0.0023 -0.0229 -0.0469 -0.0341 0.0059 0.0262 -0.0207 -0.0032 -0.0245 refined 1.9399 14.5061 22.6326 X-RAY DIFFRACTION 1.7998 -0.4356 -2.6028 0.2358 1.1710 6.0100 0.1679 0.5722 -0.8409 -0.4009 0.2757 -0.3135 0.4192 0.6253 -0.4436 0.0198 0.0599 -0.0775 0.0465 -0.1525 0.0308 refined 9.0133 1.9002 8.7140 X-RAY DIFFRACTION A 37 A 76 X-RAY DIFFRACTION 1 A 77 A 217 X-RAY DIFFRACTION 2 A 218 A 242 X-RAY DIFFRACTION 3 A 243 A 267 X-RAY DIFFRACTION 4 A 268 A 365 X-RAY DIFFRACTION 5 A 381 A 468 X-RAY DIFFRACTION 5 A 366 A 380 X-RAY DIFFRACTION 6 author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASP 43 A N ASP 43 A O TYR 46 A O TYR 46 A N ASP 62 A N ASP 62 A O ALA 67 A O ALA 67 A N HIS 83 A N HIS 83 A O TYR 86 A O TYR 86 A N ASP 102 A N ASP 102 A O SER 107 A O SER 107 A N ILE 125 A N ILE 125 A O LYS 128 A O LYS 128 A N GLN 144 A N GLN 144 A O TYR 147 A O TYR 147 A N ASP 163 A N ASP 163 A O ALA 168 A O ALA 168 A N VAL 186 A N VAL 186 A O LYS 189 A O LYS 189 A N GLN 205 A N GLN 205 A O TYR 208 A O TYR 208 A N MET 223 A N MET 223 A O ALA 226 A O ALA 226 A O ILE 229 A O ILE 229 A N LYS 237 A N LYS 237 A N ARG 249 A N ARG 249 A O LYS 252 A O LYS 252 A N PHE 255 A N PHE 255 A O VAL 263 A O VAL 263 A N ASP 273 A N ASP 273 A O ASP 463 A O ASP 463 A N TYR 468 A N TYR 468 A O LYS 445 A O LYS 445 A N GLY 446 A N GLY 446 A O ASN 425 A O ASN 425 A N ASN 425 A N ASN 425 A O VAL 404 A O VAL 404 A N TYR 403 A N TYR 403 A O ILE 360 A O ILE 360 A N TYR 361 A N TYR 361 A O VAL 326 A O VAL 326 A N GLY 325 A N GLY 325 A O VAL 296 A O VAL 296 1 A NE2 GLN 618 R NE2 GLN 1 1 N 1 A ASN 1 A ASN 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 A THR 3 A THR 3 1 Y 1 A GLU 4 A GLU 4 1 Y 1 A VAL 5 A VAL 5 1 Y 1 A ALA 6 A ALA 6 1 Y 1 A LYS 7 A LYS 7 1 Y 1 A THR 8 A THR 8 1 Y 1 A SER 9 A SER 9 1 Y 1 A GLN 10 A GLN 10 1 Y 1 A ASP 11 A ASP 11 1 Y 1 A THR 12 A THR 12 1 Y 1 A THR 13 A THR 13 1 Y 1 A THR 14 A THR 14 1 Y 1 A ALA 15 A ALA 15 1 Y 1 A SER 16 A SER 16 1 Y 1 A SER 17 A SER 17 1 Y 1 A SER 18 A SER 18 1 Y 1 A SER 19 A SER 19 1 Y 1 A GLU 20 A GLU 20 1 Y 1 A GLN 21 A GLN 21 1 Y 1 A ASN 22 A ASN 22 1 Y 1 A GLN 23 A GLN 23 1 Y 1 A SER 24 A SER 24 1 Y 1 A SER 25 A SER 25 1 Y 1 A ASN 26 A ASN 26 1 Y 1 A LYS 27 A LYS 27 1 Y 1 A THR 28 A THR 28 1 Y 1 A GLN 29 A GLN 29 1 Y 1 A THR 30 A THR 30 1 Y 1 A SER 31 A SER 31 1 Y 1 A ALA 32 A ALA 32 1 Y 1 A GLU 33 A GLU 33 1 Y 1 A VAL 34 A VAL 34 1 Y 1 A GLN 35 A GLN 35 1 Y 1 A THR 36 A THR 36 1 Y 1 A CA GLN 618 WRONG HAND 1 A ALA 38 -173.43 96.37 1 A ASP 43 -113.52 79.85 1 A ASP 51 -58.41 -93.81 1 A ASP 219 -140.69 -83.56 1 A ARG 259 -93.51 30.40 1 A THR 265 -119.02 -162.02 1 A SER 303 -42.70 104.91 1 A GLU 333 -142.33 -12.84 1 A THR 413 -111.70 -105.68 1 A ARG 414 -67.85 4.32 38.15 0.58000 0.00000 0.73000 -0.42000 0.00000 0.24000 0.947 0.931 THE FIRST 37 AA OF THE POLYPEPTIDE CHAIN WERE NOT MODELLED DUE TO POOR ELECTRON DENSITY. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 0.232 0.204 0.206 2.25 57.17 1925 25982 6.900 99.3 12.134 0.153 RANDOM LIKELY RESIDUAL 1 THROUGHOUT MOLECULAR REPLACEMENT 0.291 0.208 0.80 0.80 1.20 PDB ENTRY 2WW5 MAXIMUM LIKELIHOOD MASK 2.25 57.17 136 3927 138 0 3653 0.008 0.022 3899 1.097 1.936 5273 5.465 5.000 431 37.205 24.434 212 14.444 15.000 614 23.612 15.000 13 0.079 0.200 494 0.004 0.020 3025 0.196 0.200 1690 0.308 0.200 2589 0.133 0.200 192 0.211 0.200 72 0.148 0.200 15 0.542 1.500 2181 0.981 2.000 3395 1.158 3.000 2098 1.802 4.500 1878 0.3210 0.2750 2.31 152 1897 20 99.76 2.25 75.00 2WWD 27909 0.0 0.08 1 12.70 3.5 99.4 0.50 2.25 2.37 2.60 1 3.6 99.8 refinement REFMAC 5.2.0019 data reduction MOSFLM data scaling SCALA phasing MOLREP 3D-structure of the modular autolysin LytC from Streptococcus pneumoniae in complex with pneummococcal peptidoglycan fragment 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 5 N N 6 N N 7 N N A LYS 133 A LYS 133 HELX_P A TYR 137 A TYR 137 5 1 5 A LYS 194 A LYS 194 HELX_P A TYR 198 A TYR 198 5 2 5 A SER 275 A SER 275 HELX_P A GLY 279 A GLY 279 5 3 5 A ASP 283 A ASP 283 HELX_P A ASN 291 A ASN 291 1 4 9 A GLU 309 A GLU 309 HELX_P A GLY 321 A GLY 321 1 5 13 A ASN 334 A ASN 334 HELX_P A TYR 352 A TYR 352 1 6 19 A ASP 379 A ASP 379 HELX_P A ALA 397 A ALA 397 1 7 19 A ARG 408 A ARG 408 HELX_P A THR 413 A THR 413 1 8 6 A HIS 417 A HIS 417 HELX_P A LYS 422 A LYS 422 1 9 6 covale 1.342 both sing A ALA 617 Q C ALA 1_555 A GLN 618 R N GLN 1_555 covale 1.332 one sing A ALA 617 Q N ALA 1_555 B MUB 1 B C10 MUB 1_555 covale 1.433 both B MUB 1 B O4 MUB 1_555 B NAG 2 B C1 NAG 1_555 HYDROLASE HYDROLASE, GLYCOSIDASE, CHOLINE-BINDING PROTEINS Q9Z4J8_STRPN UNP 1 Q9Z4J8 34 501 2WWD 1 468 Q9Z4J8 A 1 1 468 2 2 2 2 2 2 2 2 2 3 3 9 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel A TYR 41 A TYR 41 A ASP 43 A ASP 43 A TYR 46 A TYR 46 A VAL 48 A VAL 48 A GLU 58 A GLU 58 A ASP 62 A ASP 62 A ALA 67 A ALA 67 A ILE 71 A ILE 71 A GLU 81 A GLU 81 A HIS 83 A HIS 83 A TYR 86 A TYR 86 A LEU 88 A LEU 88 A GLU 98 A GLU 98 A ASP 102 A ASP 102 A SER 107 A SER 107 A LEU 111 A LEU 111 A GLU 121 A GLU 121 A ILE 125 A ILE 125 A LYS 128 A LYS 128 A PHE 132 A PHE 132 A GLN 142 A GLN 142 A GLN 144 A GLN 144 A TYR 147 A TYR 147 A LEU 149 A LEU 149 A GLU 159 A GLU 159 A ASP 163 A ASP 163 A ALA 168 A ALA 168 A LEU 172 A LEU 172 A GLU 182 A GLU 182 A VAL 186 A VAL 186 A LYS 189 A LYS 189 A PHE 193 A PHE 193 A GLU 203 A GLU 203 A GLN 205 A GLN 205 A TYR 208 A TYR 208 A LEU 210 A LEU 210 A GLU 220 A GLU 220 A MET 223 A MET 223 A ALA 226 A ALA 226 A PHE 230 A PHE 230 A LEU 236 A LEU 236 A ASP 241 A ASP 241 A GLY 245 A GLY 245 A ARG 249 A ARG 249 A LYS 252 A LYS 252 A PHE 256 A PHE 256 A GLN 262 A GLN 262 A VAL 263 A VAL 263 A LYS 269 A LYS 269 A ILE 274 A ILE 274 A VAL 462 A VAL 462 A TYR 468 A TYR 468 A LYS 445 A LYS 445 A GLU 453 A GLU 453 A VAL 424 A VAL 424 A ALA 428 A ALA 428 A VAL 402 A VAL 402 A TYR 407 A TYR 407 A ILE 360 A ILE 360 A ASP 363 A ASP 363 A TYR 324 A TYR 324 A TYR 329 A TYR 329 A GLY 295 A GLY 295 A TYR 302 A TYR 302 A LYS 269 A LYS 269 A ILE 274 A ILE 274 4 P 1 21 1