0.021939
0.012667
0.000000
0.000000
0.025333
0.000000
0.000000
0.000000
0.019293
0.00000
0.00000
0.00000
Badarau, A.
Firbank, S.J.
McCarthy, A.A.
Banfield, M.J.
Dennison, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
45.580
45.580
51.831
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 1
63.546
COPPER (I) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
49
7798
10.1021/BI101064W
20726513
Visualizing the Metal-Binding Versatility of Copper Trafficking Sites .
2010
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
CCD
2009-09-15
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
1.37
1.0
I03
Diamond
1.37
SYNCHROTRON
DIAMOND BEAMLINE I03
7653.774
CATION-TRANSPORTING ATPASE PACS
N-TERMINAL, COPPER-BINDING DOMAIN, RESIDUES 1-71
1
man
polymer
63.546
COPPER (I) ION
1
syn
non-polymer
18.015
water
12
nat
water
PACS-N
no
no
MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVLK
MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVLK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1148
SYNECHOCYSTIS SP. PCC 6803
469008
ESCHERICHIA COLI
BL21(DE3)
PLASMID
PET29A
1
2.03
39.43
NONE
4.6
40 % (W/V) PEG 300 AND 100 MM CITRATE -PHOSPHATE PH 4.6
repository
Initial release
Version format compliance
Version format compliance
1
0
2010-08-18
1
1
2011-05-12
1
2
2011-07-13
SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF THECOPPPER(I) ATPASE PACS IN ITS APO FORM
COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU1 FORM)
COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU1, TRIMERIC FORM, HIS61TYR MUTANT)
VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING SITES: H61Y ATX1 SIDE-TO-SIDE
VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING SITES: ATX1 SIDE-TO-SIDE (ANAEROBIC)
VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING SITES: ATX1 SIDE-TO-SIDE (AEROBIC)
COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU2 FORM)
PDBE
Y
PDBE
2010-07-29
REL
CU1
COPPER (I) ION
HOH
water
CU1
101
2
CU1
CU1
101
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
n
1
1
A
ALA
2
n
2
ALA
2
A
GLN
3
n
3
GLN
3
A
THR
4
n
4
THR
4
A
ILE
5
n
5
ILE
5
A
ASN
6
n
6
ASN
6
A
LEU
7
n
7
LEU
7
A
GLN
8
n
8
GLN
8
A
LEU
9
n
9
LEU
9
A
GLU
10
n
10
GLU
10
A
GLY
11
n
11
GLY
11
A
MET
12
n
12
MET
12
A
ARG
13
n
13
ARG
13
A
CYS
14
n
14
CYS
14
A
ALA
15
n
15
ALA
15
A
ALA
16
n
16
ALA
16
A
CYS
17
n
17
CYS
17
A
ALA
18
n
18
ALA
18
A
SER
19
n
19
SER
19
A
SER
20
n
20
SER
20
A
ILE
21
n
21
ILE
21
A
GLU
22
n
22
GLU
22
A
ARG
23
n
23
ARG
23
A
ALA
24
n
24
ALA
24
A
ILE
25
n
25
ILE
25
A
ALA
26
n
26
ALA
26
A
LYS
27
n
27
LYS
27
A
VAL
28
n
28
VAL
28
A
PRO
29
n
29
PRO
29
A
GLY
30
n
30
GLY
30
A
VAL
31
n
31
VAL
31
A
GLN
32
n
32
GLN
32
A
SER
33
n
33
SER
33
A
CYS
34
n
34
CYS
34
A
GLN
35
n
35
GLN
35
A
VAL
36
n
36
VAL
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ALA
39
n
39
ALA
39
A
LEU
40
n
40
LEU
40
A
GLU
41
n
41
GLU
41
A
GLN
42
n
42
GLN
42
A
ALA
43
n
43
ALA
43
A
VAL
44
n
44
VAL
44
A
VAL
45
n
45
VAL
45
A
SER
46
n
46
SER
46
A
TYR
47
n
47
TYR
47
A
HIS
48
n
48
HIS
48
A
n
49
49
A
n
50
50
A
n
51
51
A
THR
52
n
52
THR
52
A
PRO
53
n
53
PRO
53
A
GLN
54
n
54
GLN
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
THR
57
n
57
THR
57
A
ASP
58
n
58
ASP
58
A
ALA
59
n
59
ALA
59
A
VAL
60
n
60
VAL
60
A
GLU
61
n
61
GLU
61
A
ARG
62
n
62
ARG
62
A
ALA
63
n
63
ALA
63
A
GLY
64
n
64
GLY
64
A
TYR
65
n
65
TYR
65
A
HIS
66
n
66
HIS
66
A
ALA
67
n
67
ALA
67
A
ARG
68
n
68
ARG
68
A
VAL
69
n
69
VAL
69
A
LEU
70
n
70
LEU
70
A
LYS
71
n
71
LYS
71
A
author_and_software_defined_assembly
PISA
1
monomeric
A
CYS
14
A
SG
CYS
14
1_555
A
CU1
101
B
CU
CU1
1_555
A
CYS
14
A
SG
CYS
14
3_655
117.0
A
CYS
14
A
SG
CYS
14
1_555
A
CU1
101
B
CU
CU1
1_555
A
CYS
17
A
SG
CYS
17
1_555
141.0
A
CYS
14
A
SG
CYS
14
3_655
A
CU1
101
B
CU
CU1
1_555
A
CYS
17
A
SG
CYS
17
1_555
101.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ASN
37
A
N
ASN
37
A
O
GLN
42
A
O
GLN
42
A
N
TYR
47
A
N
TYR
47
A
O
GLN
3
A
O
GLN
3
A
N
GLU
10
A
N
GLU
10
A
O
HIS
66
A
O
HIS
66
1
A
CD
ARG
23
A
CD
ARG
23
0
Y
1
A
NE
ARG
23
A
NE
ARG
23
0
Y
1
A
CZ
ARG
23
A
CZ
ARG
23
0
Y
1
A
NH1
ARG
23
A
NH1
ARG
23
0
Y
1
A
NH2
ARG
23
A
NH2
ARG
23
0
Y
1
A
CG
LYS
27
A
CG
LYS
27
1
Y
1
A
CD
LYS
27
A
CD
LYS
27
1
Y
1
A
CE
LYS
27
A
CE
LYS
27
1
Y
1
A
NZ
LYS
27
A
NZ
LYS
27
1
Y
1
A
CG
GLN
32
A
CG
GLN
32
1
Y
1
A
CD
GLN
32
A
CD
GLN
32
1
Y
1
A
OE1
GLN
32
A
OE1
GLN
32
1
Y
1
A
NE2
GLN
32
A
NE2
GLN
32
1
Y
1
A
CG
GLN
54
A
CG
GLN
54
1
Y
1
A
CD
GLN
54
A
CD
GLN
54
1
Y
1
A
OE1
GLN
54
A
OE1
GLN
54
1
Y
1
A
NE2
GLN
54
A
NE2
GLN
54
1
Y
1
A
CG1
ILE
55
A
CG1
ILE
55
1
Y
1
A
CG2
ILE
55
A
CG2
ILE
55
1
Y
1
A
CD1
ILE
55
A
CD1
ILE
55
1
Y
1
A
CG
ARG
62
A
CG
ARG
62
1
Y
1
A
CD
ARG
62
A
CD
ARG
62
1
Y
1
A
NE
ARG
62
A
NE
ARG
62
1
Y
1
A
CZ
ARG
62
A
CZ
ARG
62
1
Y
1
A
NH1
ARG
62
A
NH1
ARG
62
1
Y
1
A
NH2
ARG
62
A
NH2
ARG
62
1
Y
1
A
NE
ARG
68
A
NE
ARG
68
1
Y
1
A
CZ
ARG
68
A
CZ
ARG
68
1
Y
1
A
NH1
ARG
68
A
NH1
ARG
68
1
Y
1
A
NH2
ARG
68
A
NH2
ARG
68
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
GLY
49
A
GLY
49
1
Y
1
A
GLU
50
A
GLU
50
1
Y
1
A
THR
51
A
THR
51
1
Y
23.632
0.65
0.32
0.00
0.65
0.00
-0.97
0.927
0.930
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.
0.25922
0.24332
0.24496
1.80
51.85
586
5475
9.7
99.47
2.233
0.069
RANDOM
1
THROUGHOUT
SAD
0.172
0.146
0.80
0.80
1.20
NONE
MAXIMUM LIKELIHOOD
MASK
1.80
51.85
12
493
1
0
480
0.018
0.021
493
0.003
0.020
298
1.553
1.944
675
0.896
3.000
740
6.560
5.000
69
43.871
25.556
18
14.170
15.000
72
1.435
15.000
1
0.099
0.200
84
0.007
0.020
565
0.001
0.020
88
1.130
1.500
339
0.250
1.500
136
2.006
2.000
538
2.891
3.000
154
4.646
4.500
135
0.288
0.237
1.847
46
386
20
99.08
1.80
39.47
2XMW
6085
0.0
0.07
1
39.00
23.5
100.0
0.42
1.80
1.90
10.30
1
23.9
100.0
refinement
REFMAC
5.5.0035
data reduction
MOSFLM
data scaling
SCALA
phasing
PHENIX.HYSS
phasing
MLPHARE
phasing
DM
CATION-TRANSPORTING ATPASE PACS
PacS, N-terminal domain, from Synechocystis PCC6803
1
N
N
2
N
N
3
N
N
A
CYS
14
A
CYS
14
HELX_P
A
LYS
27
A
LYS
27
1
1
14
A
THR
52
A
THR
52
HELX_P
A
GLY
64
A
GLY
64
1
2
13
metalc
2.166
A
CU1
101
B
CU
CU1
1_555
A
CYS
14
A
SG
CYS
14
1_555
metalc
2.387
A
CU1
101
B
CU
CU1
1_555
A
CYS
14
A
SG
CYS
14
3_655
metalc
2.161
A
CU1
101
B
CU
CU1
1_555
A
CYS
17
A
SG
CYS
17
1_555
HYDROLASE
HYDROLASE, CU(I)-BINDING, TRAFFICKING
ATCS_SYNY3
UNP
1
P73241
1
71
2XMW
1
71
P73241
A
1
1
71
4
anti-parallel
anti-parallel
anti-parallel
A
VAL
31
A
VAL
31
A
ASN
37
A
ASN
37
A
GLN
42
A
GLN
42
A
TYR
47
A
TYR
47
A
GLN
3
A
GLN
3
A
GLU
10
A
GLU
10
A
HIS
66
A
HIS
66
A
LEU
70
A
LEU
70
BINDING SITE FOR RESIDUE CU1 A 101
Software
3
A
CYS
14
A
CYS
14
3
1_555
A
CYS
14
A
CYS
14
3
3_655
A
CYS
17
A
CYS
17
3
1_555
150
P 3 2 1