0.010696
0.000000
0.008670
0.000000
0.019227
0.000000
0.000000
0.000000
0.018653
0.00000
0.00000
0.00000
Jauch, R.
Choo, S.H.
Ng, C.K.L.
Kolatkar, P.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
129.03
90.00
93.497
52.009
69.013
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
S
C
N
243
N
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
N
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
O
N
269
N
O
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
N
C
N
282
N
C
N
283
N
O
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
Y
295
N
C
Y
296
N
N
Y
297
N
C
Y
298
N
C
Y
299
N
N
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
S
C
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
N
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
N
388
N
C
N
389
N
S
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
N
429
N
O
N
430
N
C
N
431
N
C
N
432
N
C
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
N
448
N
O
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
N
N
458
S
C
N
459
N
C
N
460
N
O
N
461
R
C
N
462
N
O
N
463
N
C
N
464
N
O
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
N
N
475
S
C
N
476
N
C
N
477
N
O
N
478
N
C
Y
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
N
Y
483
N
C
Y
484
N
C
Y
485
N
C
Y
486
N
C
Y
487
N
C
N
488
N
O
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
N
N
502
S
C
N
503
N
C
N
504
N
O
N
505
N
C
Y
506
N
C
Y
507
N
C
Y
508
N
C
Y
509
N
C
Y
510
N
C
Y
511
N
C
N
512
N
O
N
513
N
O
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
N
N
526
S
C
N
527
N
C
N
528
N
O
N
529
N
C
N
530
N
C
N
531
N
C
N
532
N
O
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
doub
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
Y
298
N
sing
Y
299
N
doub
Y
300
N
doub
N
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
Y
406
N
doub
Y
407
N
sing
Y
408
N
sing
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
doub
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
Y
475
N
doub
Y
476
N
sing
Y
477
N
sing
N
478
N
sing
Y
479
N
doub
Y
480
N
sing
Y
481
N
sing
N
482
N
sing
Y
483
N
sing
Y
484
N
doub
N
485
N
sing
Y
486
N
doub
N
487
N
sing
Y
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
doub
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
Y
503
N
doub
Y
504
N
sing
Y
505
N
sing
N
506
N
sing
Y
507
N
doub
N
508
N
sing
Y
509
N
doub
N
510
N
sing
Y
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
doub
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
US
Proteins
PSFGEY
0867
0887-3585
79
674
10.1002/PROT.22916
21117060
Crystal Structure of the Dimeric Oct6 (POU3F1) POU Domain Bound to Palindromic More DNA.
2011
10.2210/pdb2xsd/pdb
pdb_00002xsd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-09-19
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
1.075
1.0
X29A
NSLS
1.075
SYNCHROTRON
NSLS BEAMLINE X29A
3422.260
5'-D(*AP*TP*GP*CP*AP*TP*GP*AP*GP*GP*AP)-3'
1
syn
polymer
3293.174
5'-D(*CP*CP*TP*CP*AP*TP*GP*CP*AP*TP*AP)-3'
1
syn
polymer
18255.854
POU DOMAIN, CLASS 3, TRANSCRIPTION FACTOR 1
RESIDUES 240-402
1
man
polymer
62.068
1,2-ETHANEDIOL
4
syn
non-polymer
18.015
water
38
nat
water
OCTAMER-BINDING TRANSCRIPTION FACTOR 6, OCTAMER-BINDING PROTEIN 6, POU DOMAIN TRANSCRIPTION FACTOR SCIP, OTF-6, OCT-6
no
no
(DA)(DT)(DG)(DC)(DA)(DT)(DG)(DA)(DG)(DG)(DA)
ATGCATGAGGA
A
polydeoxyribonucleotide
no
no
(DC)(DC)(DT)(DC)(DA)(DT)(DG)(DC)(DA)(DT)(DA)
CCTCATGCATA
B
polydeoxyribonucleotide
no
no
GGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEET
DSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPA
AGAG
GGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEET
DSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPA
AGAG
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MOUSE
sample
10090
MUS MUSCULUS
511693
ESCHERICHIA COLI
BL21
PDEST-HISMBP
1
2.69
59.25
POLYALA MODEL WITH TERMINAL NT REMOVED
5.6
RESERVOIR: 0.2M MGCL2, 14%PEG4000 AND 0.1 SODIUM CITRATE PH5.6 PROTEIN-DNA COMPLEX: 10MG/ML IN 10 MM HEPES PH 7.0; 100 MM NACL EUQAL RESERVOIR AND PROTEIN VOLUMES MIXED
-6.733
1
20
A
201
B
211
7.602
A_DA201:DT211_B
1
-12.689
0.175
-0.006
-0.089
-7.515
1
20
A
202
B
210
3.985
A_DT202:DA210_B
2
-15.747
0.049
0.278
-0.072
-17.330
1
19
A
203
B
209
-6.058
A_DG203:DC209_B
3
-23.457
-0.003
0.031
-0.204
-8.549
1
19
A
204
B
208
-1.934
A_DC204:DG208_B
4
7.221
0.270
-0.205
-0.228
-5.940
1
20
A
205
B
207
7.027
A_DA205:DT207_B
5
-6.023
0.019
0.039
-0.142
-0.084
1
20
A
206
B
206
0.061
A_DT206:DA206_B
6
-5.806
-0.190
-0.046
0.029
7.866
1
19
A
207
B
205
0.348
A_DG207:DC205_B
7
-8.590
-0.314
-0.146
-0.238
1.728
1
20
A
208
B
204
0.012
A_DA208:DT204_B
8
-11.804
0.049
-0.089
-0.048
1.489
1
19
A
209
B
203
7.128
A_DG209:DC203_B
9
-19.226
-0.301
0.313
-0.186
-3.451
1
19
A
210
B
202
-0.542
A_DG210:DC202_B
10
-15.170
0.172
0.069
-0.050
3.214
29.475
A
A
201
202
6.161
B
B
211
210
3.279
3.128
-0.352
-0.557
AA_DA201DT202:DA210DT211_BB
1
-1.061
2.090
29.294
-1.760
0.467
3.594
39.369
A
A
202
203
5.830
B
B
210
209
3.501
3.920
-1.378
0.484
AA_DT202DG203:DC209DA210_BB
2
-1.991
2.961
39.132
0.213
1.790
2.940
39.890
A
A
203
204
-14.505
B
B
209
208
3.171
-9.802
1.004
0.579
AA_DG203DC204:DG208DC209_BB
3
-0.166
0.245
38.714
1.923
-1.490
3.185
31.387
A
A
204
205
6.177
B
B
208
207
3.305
3.335
0.727
-0.746
AA_DC204DA205:DT207DG208_BB
4
-1.017
1.884
31.198
-2.002
-1.534
2.849
28.545
A
A
205
206
10.411
B
B
207
206
3.120
5.102
-1.179
-0.743
AA_DA205DT206:DA206DT207_BB
5
2.083
-4.250
28.019
-2.578
2.828
3.283
30.619
A
A
206
207
15.264
B
B
206
205
3.229
7.972
0.212
0.625
AA_DT206DG207:DC205DA206_BB
6
0.125
-0.240
29.587
-0.412
-0.377
3.411
39.393
A
A
207
208
7.846
B
B
205
204
3.350
5.267
-0.828
0.215
AA_DG207DA208:DT204DC205_BB
7
-3.742
5.575
38.881
-0.330
0.767
3.058
33.045
A
A
208
209
12.753
B
B
204
203
3.296
7.181
0.661
-0.287
AA_DA208DG209:DC203DT204_BB
8
-4.037
7.168
32.030
-1.704
-1.838
3.300
36.950
A
A
209
210
5.422
B
B
203
202
3.333
3.431
-0.586
-0.456
AA_DG209DG210:DC202DC203_BB
9
-1.574
2.488
36.764
-1.190
0.709
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2010-10-20
1
1
2011-05-08
1
2
2011-07-13
1
3
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBE
Y
PDBE
2010-09-28
REL
REL
EDO
1,2-ETHANEDIOL
HOH
water
1E3O
PDB ENTRY 1E3O
PDB
experimental model
EDO
1398
4
EDO
EDO
1398
C
EDO
1399
4
EDO
EDO
1399
C
EDO
1400
4
EDO
EDO
1400
C
EDO
1401
4
EDO
EDO
1401
C
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2001
5
HOH
HOH
2001
B
HOH
2002
5
HOH
HOH
2002
B
HOH
2003
5
HOH
HOH
2003
B
HOH
2004
5
HOH
HOH
2004
B
HOH
2005
5
HOH
HOH
2005
B
HOH
2006
5
HOH
HOH
2006
B
HOH
2007
5
HOH
HOH
2007
B
HOH
2008
5
HOH
HOH
2008
B
HOH
2009
5
HOH
HOH
2009
B
HOH
2010
5
HOH
HOH
2010
B
HOH
2011
5
HOH
HOH
2011
B
HOH
2012
5
HOH
HOH
2012
B
HOH
2013
5
HOH
HOH
2013
B
HOH
2014
5
HOH
HOH
2014
B
HOH
2015
5
HOH
HOH
2015
B
HOH
2001
5
HOH
HOH
2001
C
HOH
2002
5
HOH
HOH
2002
C
HOH
2003
5
HOH
HOH
2003
C
HOH
2004
5
HOH
HOH
2004
C
HOH
2005
5
HOH
HOH
2005
C
HOH
2006
5
HOH
HOH
2006
C
HOH
2007
5
HOH
HOH
2007
C
HOH
2008
5
HOH
HOH
2008
C
HOH
2009
5
HOH
HOH
2009
C
HOH
2010
5
HOH
HOH
2010
C
HOH
2011
5
HOH
HOH
2011
C
HOH
2012
5
HOH
HOH
2012
C
HOH
2013
5
HOH
HOH
2013
C
HOH
2014
5
HOH
HOH
2014
C
HOH
2015
5
HOH
HOH
2015
C
HOH
2016
5
HOH
HOH
2016
C
HOH
2017
5
HOH
HOH
2017
C
HOH
2018
5
HOH
HOH
2018
C
DA
201
n
1
DA
201
A
DT
202
n
2
DT
202
A
DG
203
n
3
DG
203
A
DC
204
n
4
DC
204
A
DA
205
n
5
DA
205
A
DT
206
n
6
DT
206
A
DG
207
n
7
DG
207
A
DA
208
n
8
DA
208
A
DG
209
n
9
DG
209
A
DG
210
n
10
DG
210
A
DA
211
n
11
DA
211
A
DC
202
n
1
DC
202
B
DC
203
n
2
DC
203
B
DT
204
n
3
DT
204
B
DC
205
n
4
DC
205
B
DA
206
n
5
DA
206
B
DT
207
n
6
DT
207
B
DG
208
n
7
DG
208
B
DC
209
n
8
DC
209
B
DA
210
n
9
DA
210
B
DT
211
n
10
DT
211
B
DA
212
n
11
DA
212
B
n
1
239
C
n
2
240
C
n
3
241
C
n
4
242
C
n
5
243
C
n
6
244
C
n
7
245
C
n
8
246
C
ALA
247
n
9
ALA
247
C
PRO
248
n
10
PRO
248
C
SER
249
n
11
SER
249
C
SER
250
n
12
SER
250
C
ASP
251
n
13
ASP
251
C
ASP
252
n
14
ASP
252
C
LEU
253
n
15
LEU
253
C
GLU
254
n
16
GLU
254
C
GLN
255
n
17
GLN
255
C
PHE
256
n
18
PHE
256
C
ALA
257
n
19
ALA
257
C
LYS
258
n
20
LYS
258
C
GLN
259
n
21
GLN
259
C
PHE
260
n
22
PHE
260
C
LYS
261
n
23
LYS
261
C
GLN
262
n
24
GLN
262
C
ARG
263
n
25
ARG
263
C
ARG
264
n
26
ARG
264
C
ILE
265
n
27
ILE
265
C
LYS
266
n
28
LYS
266
C
LEU
267
n
29
LEU
267
C
GLY
268
n
30
GLY
268
C
PHE
269
n
31
PHE
269
C
THR
270
n
32
THR
270
C
GLN
271
n
33
GLN
271
C
ALA
272
n
34
ALA
272
C
ASP
273
n
35
ASP
273
C
VAL
274
n
36
VAL
274
C
GLY
275
n
37
GLY
275
C
LEU
276
n
38
LEU
276
C
ALA
277
n
39
ALA
277
C
LEU
278
n
40
LEU
278
C
GLY
279
n
41
GLY
279
C
THR
280
n
42
THR
280
C
LEU
281
n
43
LEU
281
C
TYR
282
n
44
TYR
282
C
GLY
283
n
45
GLY
283
C
ASN
284
n
46
ASN
284
C
VAL
285
n
47
VAL
285
C
PHE
286
n
48
PHE
286
C
SER
287
n
49
SER
287
C
GLN
288
n
50
GLN
288
C
THR
289
n
51
THR
289
C
THR
290
n
52
THR
290
C
ILE
291
n
53
ILE
291
C
CYS
292
n
54
CYS
292
C
ARG
293
n
55
ARG
293
C
PHE
294
n
56
PHE
294
C
GLU
295
n
57
GLU
295
C
ALA
296
n
58
ALA
296
C
LEU
297
n
59
LEU
297
C
GLN
298
n
60
GLN
298
C
LEU
299
n
61
LEU
299
C
SER
300
n
62
SER
300
C
PHE
301
n
63
PHE
301
C
LYS
302
n
64
LYS
302
C
ASN
303
n
65
ASN
303
C
MET
304
n
66
MET
304
C
CYS
305
n
67
CYS
305
C
LYS
306
n
68
LYS
306
C
LEU
307
n
69
LEU
307
C
LYS
308
n
70
LYS
308
C
PRO
309
n
71
PRO
309
C
LEU
310
n
72
LEU
310
C
LEU
311
n
73
LEU
311
C
ASN
312
n
74
ASN
312
C
LYS
313
n
75
LYS
313
C
TRP
314
n
76
TRP
314
C
LEU
315
n
77
LEU
315
C
GLU
316
n
78
GLU
316
C
GLU
317
n
79
GLU
317
C
THR
318
n
80
THR
318
C
ASP
319
n
81
ASP
319
C
n
82
320
C
n
83
321
C
n
84
322
C
n
85
323
C
n
86
324
C
n
87
325
C
n
88
326
C
n
89
327
C
n
90
328
C
n
91
329
C
n
92
330
C
n
93
331
C
n
94
332
C
n
95
333
C
n
96
334
C
n
97
335
C
n
98
336
C
n
99
337
C
n
100
338
C
n
101
339
C
n
102
340
C
n
103
341
C
n
104
342
C
SER
343
n
105
SER
343
C
ILE
344
n
106
ILE
344
C
GLU
345
n
107
GLU
345
C
VAL
346
n
108
VAL
346
C
GLY
347
n
109
GLY
347
C
VAL
348
n
110
VAL
348
C
LYS
349
n
111
LYS
349
C
GLY
350
n
112
GLY
350
C
ALA
351
n
113
ALA
351
C
LEU
352
n
114
LEU
352
C
GLU
353
n
115
GLU
353
C
SER
354
n
116
SER
354
C
HIS
355
n
117
HIS
355
C
PHE
356
n
118
PHE
356
C
LEU
357
n
119
LEU
357
C
LYS
358
n
120
LYS
358
C
CYS
359
n
121
CYS
359
C
PRO
360
n
122
PRO
360
C
LYS
361
n
123
LYS
361
C
PRO
362
n
124
PRO
362
C
SER
363
n
125
SER
363
C
ALA
364
n
126
ALA
364
C
HIS
365
n
127
HIS
365
C
GLU
366
n
128
GLU
366
C
ILE
367
n
129
ILE
367
C
THR
368
n
130
THR
368
C
GLY
369
n
131
GLY
369
C
LEU
370
n
132
LEU
370
C
ALA
371
n
133
ALA
371
C
ASP
372
n
134
ASP
372
C
SER
373
n
135
SER
373
C
LEU
374
n
136
LEU
374
C
GLN
375
n
137
GLN
375
C
LEU
376
n
138
LEU
376
C
GLU
377
n
139
GLU
377
C
LYS
378
n
140
LYS
378
C
GLU
379
n
141
GLU
379
C
VAL
380
n
142
VAL
380
C
VAL
381
n
143
VAL
381
C
ARG
382
n
144
ARG
382
C
VAL
383
n
145
VAL
383
C
TRP
384
n
146
TRP
384
C
PHE
385
n
147
PHE
385
C
CYS
386
n
148
CYS
386
C
ASN
387
n
149
ASN
387
C
ARG
388
n
150
ARG
388
C
ARG
389
n
151
ARG
389
C
GLN
390
n
152
GLN
390
C
LYS
391
n
153
LYS
391
C
GLU
392
n
154
GLU
392
C
LYS
393
n
155
LYS
393
C
ARG
394
n
156
ARG
394
C
MET
395
n
157
MET
395
C
THR
396
n
158
THR
396
C
PRO
397
n
159
PRO
397
C
n
160
398
C
n
161
399
C
n
162
400
C
n
163
401
C
n
164
402
C
4.8088
-1.4276
-0.7499
1.7959
0.1441
0.1806
-0.0403
-1.2790
-0.0708
0.7314
0.2267
0.0953
0.2249
0.5224
-0.2452
0.5997
0.1115
-0.0939
0.5720
-0.0337
0.3564
refined
-3.5520
846.7952
38.2165
X-RAY DIFFRACTION
0.8828
0.3605
0.5584
0.1655
0.1076
1.0046
0.1365
-0.1973
0.0959
0.1326
-0.1934
-0.1058
-0.0954
-0.0666
0.0191
0.3738
-0.0112
0.0155
0.3752
-0.0274
0.4646
refined
-8.9087
854.9192
29.5247
X-RAY DIFFRACTION
0.1904
0.1074
-0.1231
0.1995
-0.6044
2.3901
-0.0858
0.0379
0.1246
0.0656
0.0380
-0.5674
0.3187
0.3448
-0.0070
0.3382
0.0011
-0.1134
0.3453
-0.0285
0.5510
refined
-0.6780
851.2381
31.5557
X-RAY DIFFRACTION
6.6646
0.1063
1.6122
1.9528
-1.1005
3.7820
0.5054
1.4054
-0.9477
-0.6820
-0.1727
0.0733
2.6305
-0.1654
-0.0355
1.5153
-0.2198
-0.0258
0.8037
-0.2321
0.7742
refined
-15.7938
831.1885
7.4362
X-RAY DIFFRACTION
8.2923
-0.9409
-0.2339
1.9143
-0.2394
0.0455
0.3935
1.6933
0.2525
-1.1756
-0.1261
-0.3613
1.1584
0.2374
-0.2419
0.9559
-0.0776
0.0256
0.7796
-0.0912
0.4879
refined
-14.8282
839.0312
7.4425
X-RAY DIFFRACTION
5.7902
3.8949
6.0263
6.9746
5.8898
7.0428
0.5475
-0.8835
0.1709
0.6126
-1.3153
-0.5177
1.1006
-0.7968
0.3208
0.6779
0.0521
0.0885
0.5638
-0.1469
0.4930
refined
-6.1938
837.0064
20.0448
X-RAY DIFFRACTION
4.7212
0.1495
0.8426
1.0964
-0.3255
1.6271
0.0797
1.1136
0.3153
-0.4195
0.0554
-0.2289
0.4492
0.1341
-0.0613
0.4788
0.0376
0.1238
0.6443
0.0056
0.4182
refined
-9.9642
847.5584
13.8428
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(CHAIN C AND RESID 247:269)
X-RAY DIFFRACTION
2
(CHAIN C AND RESID 270:296)
X-RAY DIFFRACTION
3
(CHAIN C AND RESID 297:319)
X-RAY DIFFRACTION
4
(CHAIN C AND RESID 343:375)
X-RAY DIFFRACTION
5
(CHAIN C AND RESID 376:387)
X-RAY DIFFRACTION
6
(CHAIN C AND RESID 388:397)
X-RAY DIFFRACTION
7
(CHAIN A OR CHAIN B)
author_and_software_defined_assembly
PISA
3
trimeric
4070
-14.5
10000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HOH
2001
H
HOH
1
B
HOH
2013
I
HOH
1
A
O5'
DA
201
A
O5'
DA
1
1
Y
1
B
C5'
DA
212
B
C5'
DA
11
1
Y
1
B
C4'
DA
212
B
C4'
DA
11
1
Y
1
B
O4'
DA
212
B
O4'
DA
11
1
Y
1
B
C3'
DA
212
B
C3'
DA
11
1
Y
1
B
O3'
DA
212
B
O3'
DA
11
1
Y
1
B
C2'
DA
212
B
C2'
DA
11
1
Y
1
B
C1'
DA
212
B
C1'
DA
11
1
Y
1
B
N9
DA
212
B
N9
DA
11
1
Y
1
B
C8
DA
212
B
C8
DA
11
1
Y
1
B
N7
DA
212
B
N7
DA
11
1
Y
1
B
C5
DA
212
B
C5
DA
11
1
Y
1
B
C6
DA
212
B
C6
DA
11
1
Y
1
B
N6
DA
212
B
N6
DA
11
1
Y
1
B
N1
DA
212
B
N1
DA
11
1
Y
1
B
C2
DA
212
B
C2
DA
11
1
Y
1
B
N3
DA
212
B
N3
DA
11
1
Y
1
B
C4
DA
212
B
C4
DA
11
1
Y
1
C
GLY
239
C
GLY
1
1
Y
1
C
GLY
240
C
GLY
2
1
Y
1
C
GLU
241
C
GLU
3
1
Y
1
C
HIS
242
C
HIS
4
1
Y
1
C
SER
243
C
SER
5
1
Y
1
C
ASP
244
C
ASP
6
1
Y
1
C
GLU
245
C
GLU
7
1
Y
1
C
ASP
246
C
ASP
8
1
Y
1
C
SER
320
C
SER
82
1
Y
1
C
SER
321
C
SER
83
1
Y
1
C
SER
322
C
SER
84
1
Y
1
C
GLY
323
C
GLY
85
1
Y
1
C
SER
324
C
SER
86
1
Y
1
C
PRO
325
C
PRO
87
1
Y
1
C
THR
326
C
THR
88
1
Y
1
C
ASN
327
C
ASN
89
1
Y
1
C
LEU
328
C
LEU
90
1
Y
1
C
ASP
329
C
ASP
91
1
Y
1
C
LYS
330
C
LYS
92
1
Y
1
C
ILE
331
C
ILE
93
1
Y
1
C
ALA
332
C
ALA
94
1
Y
1
C
ALA
333
C
ALA
95
1
Y
1
C
GLN
334
C
GLN
96
1
Y
1
C
GLY
335
C
GLY
97
1
Y
1
C
ARG
336
C
ARG
98
1
Y
1
C
LYS
337
C
LYS
99
1
Y
1
C
ARG
338
C
ARG
100
1
Y
1
C
LYS
339
C
LYS
101
1
Y
1
C
LYS
340
C
LYS
102
1
Y
1
C
ARG
341
C
ARG
103
1
Y
1
C
THR
342
C
THR
104
1
Y
1
C
ALA
398
C
ALA
160
1
Y
1
C
ALA
399
C
ALA
161
1
Y
1
C
GLY
400
C
GLY
162
1
Y
1
C
ALA
401
C
ALA
163
1
Y
1
C
GLY
402
C
GLY
164
1
Y
1
-5.01
0.70
108.00
102.99
A
A
A
O4'
C1'
N9
DA
DA
DA
201
201
201
N
1
-5.61
0.80
102.40
96.79
A
A
A
C3'
C2'
C1'
DG
DG
DG
207
207
207
N
1
-5.35
0.70
108.00
102.65
B
B
B
O4'
C1'
N1
DC
DC
DC
209
209
209
N
1
C
GLN
298
-95.17
43.60
72.2
-0.7021
0.0000
8.0745
5.6341
-0.0000
-4.9321
0.2317
0.1940
0.1978
2.049
41.389
1599
15949
10.03
97.63
0.32
1
1.34
MOLECULAR REPLACEMENT
25.22
0.90
1.11
PDB ENTRY 1E3O
ML
FLAT BULK SOLVENT MODEL
54.941
0.336
2.049
41.389
38
1510
16
431
1025
0.007
1537
1.153
2148
21.582
606
0.057
239
0.004
199
0.2924
0.2696
2.1152
138
1108
85.00
0.2699
0.2451
2.1908
134
1289
96.00
0.2727
0.2286
2.2785
135
1320
100.00
0.2719
0.2185
2.3822
158
1332
100.00
0.2788
0.2300
2.5077
143
1336
100.00
0.2590
0.2086
2.6648
153
1318
100.00
0.2264
0.2104
2.8705
144
1332
100.00
0.3097
0.2187
3.1593
151
1345
100.00
0.2209
0.1942
3.6163
141
1277
96.00
0.2138
0.1646
4.5552
147
1329
98.00
0.1859
0.1643
41.3979
155
1364
99.00
2.05
50.00
2XSD
15965
2.0
0.04
1
31.70
7.2
98.1
0.45
2.05
2.12
1.90
1
5.1
89.2
refinement
PHENIX
(PHENIX.REFINE)
phasing
PHASER
Crystal Structure of the dimeric Oct-6 (Pou3f1) POU domain bound to palindromic MORE DNA
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
C
SER
249
C
SER
11
HELX_P
C
LEU
267
C
LEU
29
1
1
19
C
THR
270
C
THR
32
HELX_P
C
GLY
283
C
GLY
45
1
2
14
C
SER
287
C
SER
49
HELX_P
C
ALA
296
C
ALA
58
1
3
10
C
SER
300
C
SER
62
HELX_P
C
ASP
319
C
ASP
81
1
4
20
C
GLU
345
C
GLU
107
HELX_P
C
CYS
359
C
CYS
121
1
5
15
C
SER
363
C
SER
125
HELX_P
C
GLN
375
C
GLN
137
1
6
13
C
GLU
377
C
GLU
139
HELX_P
C
LYS
393
C
LYS
155
1
7
17
hydrog
WATSON-CRICK
A
DA
201
A
N1
DA
1
1_555
B
DT
211
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
A
DA
201
A
N6
DA
1
1_555
B
DT
211
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
A
DT
202
A
N3
DT
2
1_555
B
DA
210
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
202
A
O4
DT
2
1_555
B
DA
210
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
A
DG
203
A
N1
DG
3
1_555
B
DC
209
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
203
A
N2
DG
3
1_555
B
DC
209
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
203
A
O6
DG
3
1_555
B
DC
209
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
DC
204
A
N3
DC
4
1_555
B
DG
208
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
204
A
N4
DC
4
1_555
B
DG
208
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
204
A
O2
DC
4
1_555
B
DG
208
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
DA
205
A
N1
DA
5
1_555
B
DT
207
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DA
205
A
N6
DA
5
1_555
B
DT
207
B
O4
DT
6
1_555
hydrog
WATSON-CRICK
A
DT
206
A
N3
DT
6
1_555
B
DA
206
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
206
A
O4
DT
6
1_555
B
DA
206
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DG
207
A
N1
DG
7
1_555
B
DC
205
B
N3
DC
4
1_555
hydrog
WATSON-CRICK
A
DG
207
A
N2
DG
7
1_555
B
DC
205
B
O2
DC
4
1_555
hydrog
WATSON-CRICK
A
DG
207
A
O6
DG
7
1_555
B
DC
205
B
N4
DC
4
1_555
hydrog
WATSON-CRICK
A
DA
208
A
N1
DA
8
1_555
B
DT
204
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
A
DA
208
A
N6
DA
8
1_555
B
DT
204
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
A
DG
209
A
N1
DG
9
1_555
B
DC
203
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
209
A
N2
DG
9
1_555
B
DC
203
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
209
A
O6
DG
9
1_555
B
DC
203
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
210
A
N1
DG
10
1_555
B
DC
202
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
210
A
N2
DG
10
1_555
B
DC
202
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
210
A
O6
DG
10
1_555
B
DC
202
B
N4
DC
1
1_555
TRANSCRIPTION/DNA
TRANSCRIPTION-DNA COMPLEX, SOX
2XSD
PDB
1
2XSD
2XSD
PDB
2
2XSD
PO3F1_MOUSE
UNP
3
P21952
201
211
2XSD
201
211
2XSD
A
1
1
11
202
212
2XSD
202
212
2XSD
B
2
1
11
240
402
2XSD
240
402
P21952
C
3
2
164
3
expression tag
GLY
239
2XSD
C
P21952
UNP
1
BINDING SITE FOR RESIDUE EDO C 1398
C
EDO
1398
Software
6
BINDING SITE FOR RESIDUE EDO C 1399
C
EDO
1399
Software
4
BINDING SITE FOR RESIDUE EDO C 1400
C
EDO
1400
Software
6
BINDING SITE FOR RESIDUE EDO C 1401
C
EDO
1401
Software
4
C
LEU
281
C
LEU
43
6
4_546
C
TYR
282
C
TYR
44
6
4_546
C
SER
300
C
SER
62
6
1_555
C
PHE
301
C
PHE
63
6
1_555
C
LYS
302
C
LYS
64
6
1_555
C
LYS
393
C
LYS
155
6
1_555
B
DT
211
B
DT
10
4
2_556
C
ARG
264
C
ARG
26
4
1_555
C
PHE
269
C
PHE
31
4
1_555
C
HOH
2018
J
HOH
4
1_555
A
DT
206
A
DT
6
6
1_555
A
DG
207
A
DG
7
6
1_555
B
DC
205
B
DC
4
6
1_555
C
CYS
386
C
CYS
148
6
1_555
C
ASN
387
C
ASN
149
6
1_555
C
GLN
390
C
GLN
152
6
1_555
B
DA
210
B
DA
9
4
2_556
C
ASP
273
C
ASP
35
4
1_555
C
HOH
2004
J
HOH
4
1_555
C
HOH
2018
J
HOH
4
1_555
5
C 1 2 1