0.016973
0.000000
0.000000
0.000000
0.014009
0.000000
0.000000
0.000000
0.013227
0.00000
0.00000
0.00000
Lee, E.F.
Smith, B.J.
Horne, W.S.
Mayer, K.N.
Evangelista, M.
Colman, P.M.
Gellman, S.H.
Fairlie, W.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
58.918
71.382
75.605
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C4 H9 N O2
103.120
n
(3S)-3-AMINOBUTANOIC ACID
L-peptide linking
C5 H9 N O4
147.129
n
3-AMINOPENTANEDIOIC ACID
BETA-HOMOASPARTATE
peptide-like
C6 H11 N O4
161.156
n
(3S)-3-AMINOHEXANEDIOIC ACID
L-peptide linking
C6 H12 N2 O3
160.171
(3S)-3,6-diamino-6-oxohexanoic acid
(S)-beta-3-homoglutamine
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C7 H16 N4 O2
188.228
n
(3S)-3-amino-6-[(diaminomethylidene)amino]hexanoic acid
BETA-HOMOARGININE
L-peptide linking
C12 H14 N2 O2
218.252
n
(3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTANOIC ACID
BETA-HOMOTRYPTOPHAN
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
C
N
82
S
C
N
83
N
N
N
84
N
C
N
85
N
C
N
86
N
O
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
O
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
C
N
102
N
N
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
O
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
C
N
120
N
C
N
121
N
O
N
122
N
O
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
R
C
N
163
N
C
N
164
N
O
N
165
N
C
N
166
N
S
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
N
N
184
N
O
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
O
N
203
N
O
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
N
N
215
N
C
N
216
N
C
N
217
N
O
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
Y
229
N
C
Y
230
N
N
Y
231
N
C
Y
232
N
C
Y
233
N
N
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
N
N
249
S
C
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
N
N
254
N
C
N
255
N
N
N
256
N
N
N
257
N
C
N
258
N
O
N
259
N
C
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
N
Y
288
N
C
N
289
N
C
N
290
N
C
N
291
N
O
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
S
C
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
C
N
335
N
C
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
C
N
359
N
N
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
N
381
N
C
N
382
N
S
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
N
444
N
O
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
N
N
454
S
C
N
455
N
C
N
456
N
O
N
457
R
C
N
458
N
O
N
459
N
C
N
460
N
O
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
N
N
471
S
C
N
472
N
C
N
473
N
O
N
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
N
Y
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
N
484
N
O
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
N
N
498
S
C
N
499
N
C
N
500
N
O
N
501
N
C
Y
502
N
C
Y
503
N
C
Y
504
N
C
Y
505
N
C
Y
506
N
C
Y
507
N
C
N
508
N
O
N
509
N
O
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
N
N
522
S
C
N
523
N
C
N
524
N
O
N
525
N
C
N
526
N
C
N
527
N
C
N
528
N
O
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
sing
Y
223
N
doub
Y
224
N
doub
N
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
Y
266
N
sing
Y
267
N
doub
Y
268
N
sing
Y
269
N
doub
Y
270
N
doub
Y
271
N
sing
Y
272
N
doub
Y
273
N
sing
Y
274
N
sing
Y
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
doub
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
Y
460
N
doub
Y
461
N
sing
Y
462
N
sing
N
463
N
sing
Y
464
N
doub
Y
465
N
sing
Y
466
N
sing
N
467
N
sing
Y
468
N
sing
Y
469
N
doub
N
470
N
sing
Y
471
N
doub
N
472
N
sing
Y
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
doub
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
Y
488
N
doub
Y
489
N
sing
Y
490
N
sing
N
491
N
sing
Y
492
N
doub
N
493
N
sing
Y
494
N
doub
N
495
N
sing
Y
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
doub
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
GE
Chembiochem
1439-4227
12
2025
10.1002/CBIC.201100314
21744457
Structural Basis of Bcl-Xl Recognition by a Bh3-Mimetic Alpha-Beta-Peptide Generated Via Sequence-Based Design
2011
10.2210/pdb2yj1/pdb
pdb_00002yj1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-11-05
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.953692
1.0
MX2
Australian Synchrotron
0.953692
SYNCHROTRON
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
17917.959
BCL-2-LIKE PROTEIN 1
RESIDUES 1-26,83-209
2
man
polymer
2616.975
ALPHA-BETA-PUMA BH3 FOLDAMER
2
syn
polymer
18.015
water
68
nat
water
BCL2-L-1, APOPTOSIS REGULATOR BCL-X BCL-XL
no
no
GPLGSMSQSNRELVVDFLSYKLSQKGYSWSQMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF
RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQER
GPLGSMSQSNRELVVDFLSYKLSQKGYSWSQMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF
RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQER
A,C
polypeptide(L)
no
yes
(ACE)(HT7)AR(B3E)IGA(B3Q)LR(HR7)MAD(B3D)LN(B3A)QYE(NH2)
XWAREIGAXLRRMADDLNAQYEX
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
PGEX
PLASMID
1
1.99
38.15
NONE
7.5
0.05 M CADMIUM SULPHATE 1.0 M SODIUM ACETATE 0.1 M HEPES PH 7.5.
database_PDB_rev
database_PDB_rev_record
diffrn_source
entity_poly
pdbx_database_proc
pdbx_database_status
pdbx_seq_map_depositor_info
struct_conn
diffrn_source
atom_site
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_validate_main_chain_plane
pdbx_validate_peptide_omega
pdbx_validate_rmsd_angle
pdbx_validate_torsion
struct_conn
pdbx_initial_refinement_model
repository
Initial release
Data collection
Derived calculations
Other
Polymer sequence
Data collection
Atomic model
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2011-10-12
2
0
2019-04-24
2
1
2019-07-10
3
0
2023-11-15
3
1
2023-12-20
_diffrn_source.pdbx_synchrotron_site
_entity_poly.pdbx_seq_one_letter_code_can
_pdbx_database_status.recvd_author_approval
_pdbx_seq_map_depositor_info.one_letter_code
_struct_conn.pdbx_leaving_atom_flag
_diffrn_source.pdbx_synchrotron_site
_atom_site.auth_atom_id
_atom_site.label_atom_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_validate_peptide_omega.auth_comp_id_1
_pdbx_validate_peptide_omega.auth_comp_id_2
_pdbx_validate_peptide_omega.auth_seq_id_1
_pdbx_validate_peptide_omega.auth_seq_id_2
_pdbx_validate_peptide_omega.omega
_struct_conn.pdbx_leaving_atom_flag
STRUCTURE OF BCL-XL/BAK PEPTIDE COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE
SOLUTION STRUCTURE OF THE ANTI-APOPTOTIC PROTEIN BCL- XL INCOMPLEX WITH AN ACYL-SULFONAMIDE-BASED LIGAND
BCL-XL 3D DOMAIN SWAPPED DIMER
HUMAN BCL-XL CONTAINING A GLU TO LEU MUTATION AT POSITION 92
SOLUTION STRUCTURE OF THE ANTI-APOPTOTIC PROTEIN BCL- XL INCOMPLEX WITH "SAR BY NMR" LIGANDS
SOLUTION STRUCTURE OF THE ANTI-APOPTOTIC PROTEIN BCL- XLCOMPLEXED WITH AN ACYL-SULFONAMIDE-BASED LIGAND
HUMAN BCL-XL CONTAINING A PHE TO TRP MUTATION AT POSITION 97
HUMAN BCL-XL CONTAINING AN ALA TO LEU MUTATION AT POSITION142
NMR STRUCTURE OF BCL-XL, AN INHIBITOR OF PROGRAMMED CELL DEATH, MINIMIZED AVERAGE STRUCTURE
STRUCTURE OF HUMAN BCL-XL AT 1.95 ANGSTROMS
COMPLEX OF BCL-XL WITH PEPTIDE FROM BAD
X-RAY STRUCTURE OF BCL-XL, AN INHIBITOR OF PROGRAMMED CELL DEATH
HUMAN BCL-XL CONTAINING A PHE TO LEU MUTATION AT POSITION146
PDBE
Y
PDBE
2011-05-18
REL
REL
HOH
water
32630
SYNTHETIC CONSTRUCT
sample
N-TERMINAL AMINO ACID RESIDUES GPLGS ARE A RESULT OF A
CLONING ARTIFACT, DELETION OF AMINO ACID RESIDUES 27 TO 82
AND 210 TO 233
2P1L
PDB ENTRY 2P1L
PDB
experimental model
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2001
3
HOH
HOH
2001
B
HOH
2002
3
HOH
HOH
2002
B
HOH
2001
3
HOH
HOH
2001
C
HOH
2002
3
HOH
HOH
2002
C
HOH
2003
3
HOH
HOH
2003
C
HOH
2004
3
HOH
HOH
2004
C
HOH
2005
3
HOH
HOH
2005
C
HOH
2006
3
HOH
HOH
2006
C
HOH
2007
3
HOH
HOH
2007
C
HOH
2008
3
HOH
HOH
2008
C
HOH
2009
3
HOH
HOH
2009
C
HOH
2010
3
HOH
HOH
2010
C
HOH
2011
3
HOH
HOH
2011
C
HOH
2012
3
HOH
HOH
2012
C
HOH
2013
3
HOH
HOH
2013
C
HOH
2014
3
HOH
HOH
2014
C
HOH
2015
3
HOH
HOH
2015
C
HOH
2016
3
HOH
HOH
2016
C
HOH
2017
3
HOH
HOH
2017
C
HOH
2018
3
HOH
HOH
2018
C
HOH
2019
3
HOH
HOH
2019
C
HOH
2020
3
HOH
HOH
2020
C
HOH
2021
3
HOH
HOH
2021
C
HOH
2022
3
HOH
HOH
2022
C
HOH
2023
3
HOH
HOH
2023
C
HOH
2024
3
HOH
HOH
2024
C
HOH
2025
3
HOH
HOH
2025
C
HOH
2026
3
HOH
HOH
2026
C
HOH
2001
3
HOH
HOH
2001
D
HOH
2002
3
HOH
HOH
2002
D
HOH
2003
3
HOH
HOH
2003
D
GLY
-4
n
1
GLY
-4
A
PRO
-3
n
2
PRO
-3
A
LEU
-2
n
3
LEU
-2
A
GLY
-1
n
4
GLY
-1
A
SER
0
n
5
SER
0
A
MET
1
n
6
MET
1
A
SER
2
n
7
SER
2
A
GLN
3
n
8
GLN
3
A
SER
4
n
9
SER
4
A
ASN
5
n
10
ASN
5
A
ARG
6
n
11
ARG
6
A
GLU
7
n
12
GLU
7
A
LEU
8
n
13
LEU
8
A
VAL
9
n
14
VAL
9
A
VAL
10
n
15
VAL
10
A
ASP
11
n
16
ASP
11
A
PHE
12
n
17
PHE
12
A
LEU
13
n
18
LEU
13
A
SER
14
n
19
SER
14
A
TYR
15
n
20
TYR
15
A
LYS
16
n
21
LYS
16
A
LEU
17
n
22
LEU
17
A
SER
18
n
23
SER
18
A
GLN
19
n
24
GLN
19
A
LYS
20
n
25
LYS
20
A
GLY
21
n
26
GLY
21
A
TYR
22
n
27
TYR
22
A
SER
23
n
28
SER
23
A
TRP
24
n
29
TRP
24
A
SER
25
n
30
SER
25
A
GLN
26
n
31
GLN
26
A
MET
83
n
32
MET
83
A
ALA
84
n
33
ALA
84
A
ALA
85
n
34
ALA
85
A
VAL
86
n
35
VAL
86
A
LYS
87
n
36
LYS
87
A
GLN
88
n
37
GLN
88
A
ALA
89
n
38
ALA
89
A
LEU
90
n
39
LEU
90
A
ARG
91
n
40
ARG
91
A
GLU
92
n
41
GLU
92
A
ALA
93
n
42
ALA
93
A
GLY
94
n
43
GLY
94
A
ASP
95
n
44
ASP
95
A
GLU
96
n
45
GLU
96
A
PHE
97
n
46
PHE
97
A
GLU
98
n
47
GLU
98
A
LEU
99
n
48
LEU
99
A
ARG
100
n
49
ARG
100
A
TYR
101
n
50
TYR
101
A
ARG
102
n
51
ARG
102
A
ARG
103
n
52
ARG
103
A
ALA
104
n
53
ALA
104
A
PHE
105
n
54
PHE
105
A
SER
106
n
55
SER
106
A
ASP
107
n
56
ASP
107
A
LEU
108
n
57
LEU
108
A
THR
109
n
58
THR
109
A
SER
110
n
59
SER
110
A
GLN
111
n
60
GLN
111
A
LEU
112
n
61
LEU
112
A
HIS
113
n
62
HIS
113
A
ILE
114
n
63
ILE
114
A
THR
115
n
64
THR
115
A
PRO
116
n
65
PRO
116
A
GLY
117
n
66
GLY
117
A
THR
118
n
67
THR
118
A
ALA
119
n
68
ALA
119
A
TYR
120
n
69
TYR
120
A
GLN
121
n
70
GLN
121
A
SER
122
n
71
SER
122
A
PHE
123
n
72
PHE
123
A
GLU
124
n
73
GLU
124
A
GLN
125
n
74
GLN
125
A
VAL
126
n
75
VAL
126
A
VAL
127
n
76
VAL
127
A
ASN
128
n
77
ASN
128
A
GLU
129
n
78
GLU
129
A
LEU
130
n
79
LEU
130
A
PHE
131
n
80
PHE
131
A
ARG
132
n
81
ARG
132
A
ASP
133
n
82
ASP
133
A
GLY
134
n
83
GLY
134
A
VAL
135
n
84
VAL
135
A
ASN
136
n
85
ASN
136
A
TRP
137
n
86
TRP
137
A
GLY
138
n
87
GLY
138
A
ARG
139
n
88
ARG
139
A
ILE
140
n
89
ILE
140
A
VAL
141
n
90
VAL
141
A
ALA
142
n
91
ALA
142
A
PHE
143
n
92
PHE
143
A
PHE
144
n
93
PHE
144
A
SER
145
n
94
SER
145
A
PHE
146
n
95
PHE
146
A
GLY
147
n
96
GLY
147
A
GLY
148
n
97
GLY
148
A
ALA
149
n
98
ALA
149
A
LEU
150
n
99
LEU
150
A
CYS
151
n
100
CYS
151
A
VAL
152
n
101
VAL
152
A
GLU
153
n
102
GLU
153
A
SER
154
n
103
SER
154
A
VAL
155
n
104
VAL
155
A
ASP
156
n
105
ASP
156
A
LYS
157
n
106
LYS
157
A
GLU
158
n
107
GLU
158
A
MET
159
n
108
MET
159
A
GLN
160
n
109
GLN
160
A
VAL
161
n
110
VAL
161
A
LEU
162
n
111
LEU
162
A
VAL
163
n
112
VAL
163
A
SER
164
n
113
SER
164
A
ARG
165
n
114
ARG
165
A
ILE
166
n
115
ILE
166
A
ALA
167
n
116
ALA
167
A
ALA
168
n
117
ALA
168
A
TRP
169
n
118
TRP
169
A
MET
170
n
119
MET
170
A
ALA
171
n
120
ALA
171
A
THR
172
n
121
THR
172
A
TYR
173
n
122
TYR
173
A
LEU
174
n
123
LEU
174
A
ASN
175
n
124
ASN
175
A
ASP
176
n
125
ASP
176
A
HIS
177
n
126
HIS
177
A
LEU
178
n
127
LEU
178
A
GLU
179
n
128
GLU
179
A
PRO
180
n
129
PRO
180
A
TRP
181
n
130
TRP
181
A
ILE
182
n
131
ILE
182
A
GLN
183
n
132
GLN
183
A
GLU
184
n
133
GLU
184
A
ASN
185
n
134
ASN
185
A
GLY
186
n
135
GLY
186
A
GLY
187
n
136
GLY
187
A
TRP
188
n
137
TRP
188
A
ASP
189
n
138
ASP
189
A
THR
190
n
139
THR
190
A
PHE
191
n
140
PHE
191
A
VAL
192
n
141
VAL
192
A
GLU
193
n
142
GLU
193
A
LEU
194
n
143
LEU
194
A
TYR
195
n
144
TYR
195
A
GLY
196
n
145
GLY
196
A
ASN
197
n
146
ASN
197
A
ASN
198
n
147
ASN
198
A
ALA
199
n
148
ALA
199
A
ALA
200
n
149
ALA
200
A
ALA
201
n
150
ALA
201
A
GLU
202
n
151
GLU
202
A
n
152
203
A
n
153
204
A
n
154
205
A
n
155
206
A
n
156
207
A
n
157
208
A
n
158
209
A
n
1
85
B
HT7
86
n
2
HT7
86
B
ALA
87
n
3
ALA
87
B
ARG
88
n
4
ARG
88
B
B3E
89
n
5
B3E
89
B
ILE
90
n
6
ILE
90
B
GLY
91
n
7
GLY
91
B
ALA
92
n
8
ALA
92
B
B3Q
93
n
9
B3Q
93
B
LEU
94
n
10
LEU
94
B
ARG
95
n
11
ARG
95
B
HR7
96
n
12
HR7
96
B
MET
97
n
13
MET
97
B
ALA
98
n
14
ALA
98
B
ASP
99
n
15
ASP
99
B
B3D
100
n
16
B3D
100
B
LEU
101
n
17
LEU
101
B
ASN
102
n
18
ASN
102
B
B3A
103
n
19
B3A
103
B
GLN
104
n
20
GLN
104
B
TYR
105
n
21
TYR
105
B
GLU
106
n
22
GLU
106
B
NH2
107
n
23
NH2
107
B
n
1
-4
C
n
2
-3
C
n
3
-2
C
n
4
-1
C
n
5
0
C
MET
1
n
6
MET
1
C
SER
2
n
7
SER
2
C
GLN
3
n
8
GLN
3
C
SER
4
n
9
SER
4
C
ASN
5
n
10
ASN
5
C
ARG
6
n
11
ARG
6
C
GLU
7
n
12
GLU
7
C
LEU
8
n
13
LEU
8
C
VAL
9
n
14
VAL
9
C
VAL
10
n
15
VAL
10
C
ASP
11
n
16
ASP
11
C
PHE
12
n
17
PHE
12
C
LEU
13
n
18
LEU
13
C
SER
14
n
19
SER
14
C
TYR
15
n
20
TYR
15
C
LYS
16
n
21
LYS
16
C
LEU
17
n
22
LEU
17
C
SER
18
n
23
SER
18
C
GLN
19
n
24
GLN
19
C
LYS
20
n
25
LYS
20
C
GLY
21
n
26
GLY
21
C
TYR
22
n
27
TYR
22
C
SER
23
n
28
SER
23
C
TRP
24
n
29
TRP
24
C
SER
25
n
30
SER
25
C
GLN
26
n
31
GLN
26
C
MET
83
n
32
MET
83
C
ALA
84
n
33
ALA
84
C
ALA
85
n
34
ALA
85
C
VAL
86
n
35
VAL
86
C
LYS
87
n
36
LYS
87
C
GLN
88
n
37
GLN
88
C
ALA
89
n
38
ALA
89
C
LEU
90
n
39
LEU
90
C
ARG
91
n
40
ARG
91
C
GLU
92
n
41
GLU
92
C
ALA
93
n
42
ALA
93
C
GLY
94
n
43
GLY
94
C
ASP
95
n
44
ASP
95
C
GLU
96
n
45
GLU
96
C
PHE
97
n
46
PHE
97
C
GLU
98
n
47
GLU
98
C
LEU
99
n
48
LEU
99
C
ARG
100
n
49
ARG
100
C
TYR
101
n
50
TYR
101
C
ARG
102
n
51
ARG
102
C
ARG
103
n
52
ARG
103
C
ALA
104
n
53
ALA
104
C
PHE
105
n
54
PHE
105
C
SER
106
n
55
SER
106
C
ASP
107
n
56
ASP
107
C
LEU
108
n
57
LEU
108
C
THR
109
n
58
THR
109
C
SER
110
n
59
SER
110
C
GLN
111
n
60
GLN
111
C
LEU
112
n
61
LEU
112
C
HIS
113
n
62
HIS
113
C
ILE
114
n
63
ILE
114
C
THR
115
n
64
THR
115
C
PRO
116
n
65
PRO
116
C
GLY
117
n
66
GLY
117
C
THR
118
n
67
THR
118
C
ALA
119
n
68
ALA
119
C
TYR
120
n
69
TYR
120
C
GLN
121
n
70
GLN
121
C
SER
122
n
71
SER
122
C
PHE
123
n
72
PHE
123
C
GLU
124
n
73
GLU
124
C
GLN
125
n
74
GLN
125
C
VAL
126
n
75
VAL
126
C
VAL
127
n
76
VAL
127
C
ASN
128
n
77
ASN
128
C
GLU
129
n
78
GLU
129
C
LEU
130
n
79
LEU
130
C
PHE
131
n
80
PHE
131
C
ARG
132
n
81
ARG
132
C
ASP
133
n
82
ASP
133
C
GLY
134
n
83
GLY
134
C
VAL
135
n
84
VAL
135
C
ASN
136
n
85
ASN
136
C
TRP
137
n
86
TRP
137
C
GLY
138
n
87
GLY
138
C
ARG
139
n
88
ARG
139
C
ILE
140
n
89
ILE
140
C
VAL
141
n
90
VAL
141
C
ALA
142
n
91
ALA
142
C
PHE
143
n
92
PHE
143
C
PHE
144
n
93
PHE
144
C
SER
145
n
94
SER
145
C
PHE
146
n
95
PHE
146
C
GLY
147
n
96
GLY
147
C
GLY
148
n
97
GLY
148
C
ALA
149
n
98
ALA
149
C
LEU
150
n
99
LEU
150
C
CYS
151
n
100
CYS
151
C
VAL
152
n
101
VAL
152
C
GLU
153
n
102
GLU
153
C
SER
154
n
103
SER
154
C
VAL
155
n
104
VAL
155
C
ASP
156
n
105
ASP
156
C
LYS
157
n
106
LYS
157
C
GLU
158
n
107
GLU
158
C
MET
159
n
108
MET
159
C
GLN
160
n
109
GLN
160
C
VAL
161
n
110
VAL
161
C
LEU
162
n
111
LEU
162
C
VAL
163
n
112
VAL
163
C
SER
164
n
113
SER
164
C
ARG
165
n
114
ARG
165
C
ILE
166
n
115
ILE
166
C
ALA
167
n
116
ALA
167
C
ALA
168
n
117
ALA
168
C
TRP
169
n
118
TRP
169
C
MET
170
n
119
MET
170
C
ALA
171
n
120
ALA
171
C
THR
172
n
121
THR
172
C
TYR
173
n
122
TYR
173
C
LEU
174
n
123
LEU
174
C
ASN
175
n
124
ASN
175
C
ASP
176
n
125
ASP
176
C
HIS
177
n
126
HIS
177
C
LEU
178
n
127
LEU
178
C
GLU
179
n
128
GLU
179
C
PRO
180
n
129
PRO
180
C
TRP
181
n
130
TRP
181
C
ILE
182
n
131
ILE
182
C
GLN
183
n
132
GLN
183
C
GLU
184
n
133
GLU
184
C
ASN
185
n
134
ASN
185
C
GLY
186
n
135
GLY
186
C
GLY
187
n
136
GLY
187
C
TRP
188
n
137
TRP
188
C
ASP
189
n
138
ASP
189
C
THR
190
n
139
THR
190
C
PHE
191
n
140
PHE
191
C
VAL
192
n
141
VAL
192
C
GLU
193
n
142
GLU
193
C
LEU
194
n
143
LEU
194
C
TYR
195
n
144
TYR
195
C
GLY
196
n
145
GLY
196
C
n
146
197
C
n
147
198
C
n
148
199
C
n
149
200
C
n
150
201
C
n
151
202
C
n
152
203
C
n
153
204
C
n
154
205
C
n
155
206
C
n
156
207
C
n
157
208
C
n
158
209
C
ACE
85
n
1
ACE
85
D
HT7
86
n
2
HT7
86
D
ALA
87
n
3
ALA
87
D
ARG
88
n
4
ARG
88
D
B3E
89
n
5
B3E
89
D
ILE
90
n
6
ILE
90
D
GLY
91
n
7
GLY
91
D
ALA
92
n
8
ALA
92
D
B3Q
93
n
9
B3Q
93
D
LEU
94
n
10
LEU
94
D
ARG
95
n
11
ARG
95
D
HR7
96
n
12
HR7
96
D
MET
97
n
13
MET
97
D
ALA
98
n
14
ALA
98
D
ASP
99
n
15
ASP
99
D
B3D
100
n
16
B3D
100
D
LEU
101
n
17
LEU
101
D
ASN
102
n
18
ASN
102
D
B3A
103
n
19
B3A
103
D
GLN
104
n
20
GLN
104
D
TYR
105
n
21
TYR
105
D
GLU
106
n
22
GLU
106
D
n
23
107
D
author_and_software_defined_assembly
PISA
4
tetrameric
11080
-56.8
15070
B
HT7
86
B
HT7
2
TRP
B
B3E
89
(3S)-3-AMINOHEXANEDIOIC ACID
B
B3E
5
GLU
B
HR7
96
B
HR7
12
ARG
B
B3D
100
3-AMINOPENTANEDIOIC ACID
B
B3D
16
ASP
B
B3A
103
(3S)-3-AMINOBUTANOIC ACID
B
B3A
19
ALA
D
HT7
86
D
HT7
2
TRP
D
B3E
89
(3S)-3-AMINOHEXANEDIOIC ACID
D
B3E
5
GLU
D
HR7
96
D
HR7
12
ARG
D
B3D
100
3-AMINOPENTANEDIOIC ACID
D
B3D
16
ASP
D
B3A
103
(3S)-3-AMINOBUTANOIC ACID
D
B3A
19
ALA
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CD
GLN
3
A
CD
GLN
8
1
Y
1
A
CD
GLN
121
A
CD
GLN
70
1
Y
1
A
CD
GLU
158
A
CD
GLU
107
1
Y
1
C
OE2
GLU
92
C
OE2
GLU
41
1
Y
1
C
CD
GLU
124
C
CD
GLU
73
1
Y
1
C
OE1
GLU
124
C
OE1
GLU
73
1
Y
1
C
OE2
GLU
124
C
OE2
GLU
73
1
Y
1
C
CD
GLU
193
C
CD
GLU
142
1
Y
1
C
OE1
GLU
193
C
OE1
GLU
142
1
Y
1
C
OE2
GLU
193
C
OE2
GLU
142
1
Y
1
A
SER
203
A
SER
152
1
Y
1
A
ARG
204
A
ARG
153
1
Y
1
A
LYS
205
A
LYS
154
1
Y
1
A
GLY
206
A
GLY
155
1
Y
1
A
GLN
207
A
GLN
156
1
Y
1
A
GLU
208
A
GLU
157
1
Y
1
A
ARG
209
A
ARG
158
1
Y
1
B
ACE
85
B
ACE
1
1
Y
1
C
GLY
-4
C
GLY
1
1
Y
1
C
PRO
-3
C
PRO
2
1
Y
1
C
LEU
-2
C
LEU
3
1
Y
1
C
GLY
-1
C
GLY
4
1
Y
1
C
SER
0
C
SER
5
1
Y
1
C
ASN
197
C
ASN
146
1
Y
1
C
ASN
198
C
ASN
147
1
Y
1
C
ALA
199
C
ALA
148
1
Y
1
C
ALA
200
C
ALA
149
1
Y
1
C
ALA
201
C
ALA
150
1
Y
1
C
GLU
202
C
GLU
151
1
Y
1
C
SER
203
C
SER
152
1
Y
1
C
ARG
204
C
ARG
153
1
Y
1
C
LYS
205
C
LYS
154
1
Y
1
C
GLY
206
C
GLY
155
1
Y
1
C
GLN
207
C
GLN
156
1
Y
1
C
GLU
208
C
GLU
157
1
Y
1
C
ARG
209
C
ARG
158
1
Y
1
D
NH2
107
D
NH2
23
1
Y
1
B
B3E
89
-18.36
1
B
B3Q
93
-18.56
1
B
B3D
100
-19.07
1
B
B3A
103
-17.67
1
D
B3E
89
-19.70
1
D
B3Q
93
-20.20
1
D
B3D
100
-16.85
1
D
B3A
103
-19.81
1
B
B
B3E
ILE
89
90
144.89
1
B
B
B3Q
LEU
93
94
141.94
1
B
B
ARG
HR7
95
96
139.62
1
B
B
B3D
LEU
100
101
142.58
1
B
B
B3A
GLN
103
104
144.85
1
D
D
B3E
ILE
89
90
141.73
1
D
D
B3Q
LEU
93
94
141.33
1
D
D
ARG
HR7
95
96
136.41
1
D
D
B3D
LEU
100
101
146.71
1
D
D
B3A
GLN
103
104
140.50
1
B
HR7
96
-11.19
-77.84
1
D
HR7
96
-11.33
-79.10
1
D
TYR
105
-101.68
56.59
-3.6550
0.0000
0.0000
0.5477
0.0000
3.1073
0.2531
0.1904
0.1936
2.24
45.439
787
15803
5.0
99.33
0.21
1
1.35
MOLECULAR REPLACEMENT
23.88
0.95
1.20
PDB ENTRY 2P1L
ML
FLAT BULK SOLVENT MODEL
55.640
0.441
2.24
45.439
68
2761
0
0
2693
0.008
2758
1.164
3725
19.642
1047
0.080
384
0.004
484
0.2930
0.1974
2.3795
130
2404
97.00
0.2820
0.1954
2.5632
125
2468
100.00
0.2635
0.1863
2.8211
139
2483
100.00
0.2676
0.1819
3.2292
145
2476
100.00
0.2037
0.1583
4.0680
129
2526
100.00
0.2599
0.2165
45.4484
119
2659
99.00
29.22
2.24
50.00
2YJ1
15846
2.0
0.18
1
14.20
8.7
99.4
0.52
2.24
2.32
3.30
1
4.8
97.1
refinement
PHENIX
(PHENIX.REFINE)
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
PHASER
FOR MR
Puma BH3 foldamer in complex with Bcl-xL
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
GLY
-1
A
GLY
4
HELX_P
A
GLN
3
A
GLN
8
5
1
5
A
SER
4
A
SER
9
HELX_P
A
LYS
20
A
LYS
25
1
2
17
A
SER
25
A
SER
30
HELX_P
A
TYR
101
A
TYR
50
1
3
21
A
TYR
101
A
TYR
50
HELX_P
A
LEU
112
A
LEU
61
1
4
12
A
THR
118
A
THR
67
HELX_P
A
PHE
131
A
PHE
80
1
5
14
A
ASN
136
A
ASN
85
HELX_P
A
LYS
157
A
LYS
106
1
6
22
A
VAL
161
A
VAL
110
HELX_P
A
HIS
177
A
HIS
126
1
7
17
A
LEU
178
A
LEU
127
HELX_P
A
ASN
185
A
ASN
134
1
8
8
A
GLY
187
A
GLY
136
HELX_P
A
GLY
196
A
GLY
145
1
9
10
B
ILE
90
B
ILE
6
HELX_P
B
ARG
95
B
ARG
11
1
10
6
C
MET
1
C
MET
6
HELX_P
C
GLN
19
C
GLN
24
1
11
19
C
SER
25
C
SER
30
HELX_P
C
TYR
101
C
TYR
50
1
12
21
C
TYR
101
C
TYR
50
HELX_P
C
SER
110
C
SER
59
1
13
10
C
THR
118
C
THR
67
HELX_P
C
PHE
131
C
PHE
80
1
14
14
C
ASN
136
C
ASN
85
HELX_P
C
LYS
157
C
LYS
106
1
15
22
C
VAL
161
C
VAL
110
HELX_P
C
LEU
178
C
LEU
127
1
16
18
C
LEU
178
C
LEU
127
HELX_P
C
ASN
185
C
ASN
134
1
17
8
C
GLY
187
C
GLY
136
HELX_P
C
TYR
195
C
TYR
144
1
18
9
D
ILE
90
D
ILE
6
HELX_P
D
ARG
95
D
ARG
11
1
19
6
covale
1.330
both
B
HT7
86
B
C
HT7
2
1_555
B
ALA
87
B
N
ALA
3
1_555
covale
1.325
both
B
ARG
88
B
C
ARG
4
1_555
B
B3E
89
B
N
B3E
5
1_555
covale
1.322
both
B
B3E
89
B
C
B3E
5
1_555
B
ILE
90
B
N
ILE
6
1_555
covale
1.326
both
B
ALA
92
B
C
ALA
8
1_555
B
B3Q
93
B
N
B3Q
9
1_555
covale
1.333
both
B
B3Q
93
B
C
B3Q
9
1_555
B
LEU
94
B
N
LEU
10
1_555
covale
1.327
both
B
ARG
95
B
C
ARG
11
1_555
B
HR7
96
B
N
HR7
12
1_555
covale
1.329
both
B
HR7
96
B
C
HR7
12
1_555
B
MET
97
B
N
MET
13
1_555
covale
1.332
both
B
ASP
99
B
C
ASP
15
1_555
B
B3D
100
B
N
B3D
16
1_555
covale
1.328
both
B
B3D
100
B
C
B3D
16
1_555
B
LEU
101
B
N
LEU
17
1_555
covale
1.325
both
B
ASN
102
B
C
ASN
18
1_555
B
B3A
103
B
N
B3A
19
1_555
covale
1.328
both
B
B3A
103
B
C
B3A
19
1_555
B
GLN
104
B
N
GLN
20
1_555
covale
1.328
both
B
GLU
106
B
C
GLU
22
1_555
B
NH2
107
B
N
NH2
23
1_555
covale
1.332
both
D
ACE
85
D
C
ACE
1
1_555
D
HT7
86
D
N
HT7
2
1_555
covale
1.329
both
D
HT7
86
D
C
HT7
2
1_555
D
ALA
87
D
N
ALA
3
1_555
covale
1.327
both
D
ARG
88
D
C
ARG
4
1_555
D
B3E
89
D
N
B3E
5
1_555
covale
1.327
both
D
B3E
89
D
C
B3E
5
1_555
D
ILE
90
D
N
ILE
6
1_555
covale
1.335
both
D
ALA
92
D
C
ALA
8
1_555
D
B3Q
93
D
N
B3Q
9
1_555
covale
1.324
both
D
B3Q
93
D
C
B3Q
9
1_555
D
LEU
94
D
N
LEU
10
1_555
covale
1.330
both
D
ARG
95
D
C
ARG
11
1_555
D
HR7
96
D
N
HR7
12
1_555
covale
1.329
both
D
HR7
96
D
C
HR7
12
1_555
D
MET
97
D
N
MET
13
1_555
covale
1.330
both
D
ASP
99
D
C
ASP
15
1_555
D
B3D
100
D
N
B3D
16
1_555
covale
1.333
both
D
B3D
100
D
C
B3D
16
1_555
D
LEU
101
D
N
LEU
17
1_555
covale
1.332
both
D
ASN
102
D
C
ASN
18
1_555
D
B3A
103
D
N
B3A
19
1_555
covale
1.329
both
D
B3A
103
D
C
B3A
19
1_555
D
GLN
104
D
N
GLN
20
1_555
APOPTOSIS
APOPTOSIS, MEMBRANE PROTEIN, FOLDAMER, BH3 DOMAIN, AUTOPHAGY
B2CL1_HUMAN
UNP
1
Q07817
2YJ1
PDB
2
2YJ1
1
26
2YJ1
1
26
Q07817
A
1
6
31
83
209
2YJ1
83
209
Q07817
A
1
32
158
1
26
2YJ1
1
26
Q07817
C
1
6
31
83
209
2YJ1
83
209
Q07817
C
1
32
158
85
107
2YJ1
85
107
2YJ1
B
2
1
23
85
107
2YJ1
85
107
2YJ1
D
2
1
23
1
cloning artifact
GLY
-4
2YJ1
A
Q07817
UNP
1
1
cloning artifact
PRO
-3
2YJ1
A
Q07817
UNP
2
1
cloning artifact
LEU
-2
2YJ1
A
Q07817
UNP
3
1
cloning artifact
GLY
-1
2YJ1
A
Q07817
UNP
4
1
cloning artifact
SER
0
2YJ1
A
Q07817
UNP
5
3
cloning artifact
GLY
-4
2YJ1
C
Q07817
UNP
1
3
cloning artifact
PRO
-3
2YJ1
C
Q07817
UNP
2
3
cloning artifact
LEU
-2
2YJ1
C
Q07817
UNP
3
3
cloning artifact
GLY
-1
2YJ1
C
Q07817
UNP
4
3
cloning artifact
SER
0
2YJ1
C
Q07817
UNP
5
19
P 21 21 21