1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Kasahara, N. Tsuda, K. Muto, Y. Inoue, M. Kigawa, T. Terada, T. Shirouzu, M. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 10.2210/pdb2ytc/pdb pdb_00002ytc 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9465.602 Pre-mRNA-splicing factor RBM22 RNA binding motif 1 man polymer RNA-binding motif protein 22, Zinc finger CCCH domain-containing protein 16 no no GSSGSSGEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLN VKWGR GSSGSSGEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLN VKWGR A hss001002688.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample Cell-free protein synthesis RBM22 9606 Homo sapiens PLASMID P060313-05 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Data collection Database references Derived calculations 1 0 2007-10-09 1 1 2011-07-13 1 2 2022-03-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2007-04-05 REL REL structures with the least restraint violations, structures with the lowest energy, target function 100 20 3D_13C-separated_NOESY 3D_15N-separated_NOESY 120mM 7.0 ambient 298 K torsion angle dynamics,restrainted molecular dynamics 1 lowest energy 20mM d-Tris-HCl(pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O 90% H2O/10% D2O Bruker collection XwinNMR 3.5 Delaglio,F processing NMRPipe 20060702 Jonson,B.A data analysis NMRView 5.0.4 Kobayashi,N data analysis KUJIRA 0.9820 Guntert,P structure solution CYANA 2.0.17 Guntert,P refinement CYANA 2.0.17 800 Bruker AVANCE GLY 227 n 1 GLY 227 A SER 228 n 2 SER 228 A SER 229 n 3 SER 229 A GLY 230 n 4 GLY 230 A SER 231 n 5 SER 231 A SER 232 n 6 SER 232 A GLY 233 n 7 GLY 233 A GLU 234 n 8 GLU 234 A ASP 235 n 9 ASP 235 A LYS 236 n 10 LYS 236 A THR 237 n 11 THR 237 A ILE 238 n 12 ILE 238 A THR 239 n 13 THR 239 A THR 240 n 14 THR 240 A LEU 241 n 15 LEU 241 A TYR 242 n 16 TYR 242 A VAL 243 n 17 VAL 243 A GLY 244 n 18 GLY 244 A GLY 245 n 19 GLY 245 A LEU 246 n 20 LEU 246 A GLY 247 n 21 GLY 247 A ASP 248 n 22 ASP 248 A THR 249 n 23 THR 249 A ILE 250 n 24 ILE 250 A THR 251 n 25 THR 251 A GLU 252 n 26 GLU 252 A THR 253 n 27 THR 253 A ASP 254 n 28 ASP 254 A LEU 255 n 29 LEU 255 A ARG 256 n 30 ARG 256 A ASN 257 n 31 ASN 257 A HIS 258 n 32 HIS 258 A PHE 259 n 33 PHE 259 A TYR 260 n 34 TYR 260 A GLN 261 n 35 GLN 261 A PHE 262 n 36 PHE 262 A GLY 263 n 37 GLY 263 A GLU 264 n 38 GLU 264 A ILE 265 n 39 ILE 265 A ARG 266 n 40 ARG 266 A THR 267 n 41 THR 267 A ILE 268 n 42 ILE 268 A THR 269 n 43 THR 269 A VAL 270 n 44 VAL 270 A VAL 271 n 45 VAL 271 A GLN 272 n 46 GLN 272 A ARG 273 n 47 ARG 273 A GLN 274 n 48 GLN 274 A GLN 275 n 49 GLN 275 A CYS 276 n 50 CYS 276 A ALA 277 n 51 ALA 277 A PHE 278 n 52 PHE 278 A ILE 279 n 53 ILE 279 A GLN 280 n 54 GLN 280 A PHE 281 n 55 PHE 281 A ALA 282 n 56 ALA 282 A THR 283 n 57 THR 283 A ARG 284 n 58 ARG 284 A GLN 285 n 59 GLN 285 A ALA 286 n 60 ALA 286 A ALA 287 n 61 ALA 287 A GLU 288 n 62 GLU 288 A VAL 289 n 63 VAL 289 A ALA 290 n 64 ALA 290 A ALA 291 n 65 ALA 291 A GLU 292 n 66 GLU 292 A LYS 293 n 67 LYS 293 A SER 294 n 68 SER 294 A PHE 295 n 69 PHE 295 A ASN 296 n 70 ASN 296 A LYS 297 n 71 LYS 297 A LEU 298 n 72 LEU 298 A ILE 299 n 73 ILE 299 A VAL 300 n 74 VAL 300 A ASN 301 n 75 ASN 301 A GLY 302 n 76 GLY 302 A ARG 303 n 77 ARG 303 A ARG 304 n 78 ARG 304 A LEU 305 n 79 LEU 305 A ASN 306 n 80 ASN 306 A VAL 307 n 81 VAL 307 A LYS 308 n 82 LYS 308 A TRP 309 n 83 TRP 309 A GLY 310 n 84 GLY 310 A ARG 311 n 85 ARG 311 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 267 A N THR 41 A O GLN 280 A O GLN 54 A O ILE 279 A O ILE 53 A N LEU 241 A N LEU 15 A N TYR 242 A N TYR 16 A O LYS 308 A O LYS 82 A N VAL 300 A N VAL 74 A O ARG 303 A O ARG 77 1 A GLU 234 -109.98 42.25 1 A LYS 236 -93.36 -66.89 1 A GLN 275 34.25 43.94 1 A ARG 284 -36.72 -36.95 1 A PHE 295 -47.86 97.07 1 A ASN 296 45.17 25.50 2 A SER 229 38.60 41.90 2 A LYS 236 -63.03 89.43 2 A THR 237 38.44 31.05 2 A GLN 275 33.04 51.09 2 A ARG 284 -36.13 -35.31 2 A PHE 295 -55.10 109.42 2 A LYS 297 -130.96 -38.43 3 A ARG 256 -39.72 -38.67 3 A GLN 275 34.37 46.90 3 A ARG 284 -36.90 -34.54 3 A ASN 296 40.51 25.03 3 A LEU 298 -61.82 96.52 4 A SER 228 -66.98 83.50 4 A GLU 234 -63.50 90.31 4 A TYR 260 -39.93 -36.19 4 A GLN 275 35.15 47.91 4 A ARG 284 -37.88 -35.69 4 A PHE 295 -57.00 103.11 4 A ASN 296 42.13 27.69 5 A SER 229 -104.66 42.25 5 A THR 237 37.51 36.80 5 A GLN 275 33.63 47.37 5 A PHE 295 -50.35 109.47 5 A LYS 297 -133.71 -33.69 5 A LEU 298 -67.62 98.30 6 A SER 231 -166.88 108.99 6 A THR 239 -95.35 35.39 6 A TYR 260 -39.92 -35.67 6 A ARG 284 -38.29 -39.62 6 A ASN 296 40.18 26.16 7 A THR 239 -97.57 36.19 7 A GLN 275 32.26 50.45 7 A ARG 284 -36.31 -34.20 7 A PHE 295 -54.08 109.79 7 A ASN 296 41.51 29.71 7 A LEU 298 -63.40 98.03 8 A SER 229 -126.13 -50.98 8 A THR 237 39.00 38.10 8 A GLN 275 34.25 53.14 8 A PHE 295 -46.37 107.06 8 A ASN 296 40.12 27.73 9 A GLN 275 32.25 50.16 9 A ARG 284 -36.00 -37.01 9 A PHE 295 -57.13 104.11 9 A LEU 298 -65.96 96.40 10 A SER 231 -175.00 134.31 10 A ASP 235 -57.40 109.12 10 A LYS 236 -102.26 -69.48 10 A THR 239 -98.75 38.34 10 A GLN 275 34.91 53.21 10 A PHE 295 -52.43 95.91 10 A ASN 296 48.10 29.37 11 A PHE 295 -55.57 105.76 11 A ASN 296 40.67 29.88 11 A LEU 298 -67.04 93.33 12 A LYS 236 -124.46 -56.48 12 A THR 239 -99.20 36.27 12 A GLN 275 34.38 43.99 12 A ARG 284 -36.14 -39.30 12 A PHE 295 -50.20 102.23 13 A THR 237 36.44 44.82 13 A ARG 284 -37.21 -38.83 13 A ASN 296 41.90 25.82 14 A THR 237 35.84 40.64 14 A GLN 275 33.73 50.82 14 A ARG 284 -39.00 -33.04 14 A ASN 296 43.36 27.79 14 A LEU 298 -67.80 97.37 15 A THR 239 -99.61 32.20 15 A GLN 275 34.32 47.26 15 A ARG 284 -38.44 -35.52 15 A PHE 295 -58.19 102.50 15 A LEU 298 -68.65 98.53 16 A SER 228 -88.28 42.26 16 A ASP 248 -40.00 -37.88 16 A GLN 275 33.34 53.79 16 A ARG 284 -35.97 -39.46 16 A PHE 295 -53.73 106.57 16 A LYS 297 -131.02 -33.31 16 A LEU 298 -66.90 98.17 17 A SER 228 -57.36 108.04 17 A LYS 236 -55.17 94.12 17 A THR 237 31.90 46.74 17 A THR 239 -86.34 30.22 17 A TYR 260 -39.94 -36.73 17 A GLN 275 34.66 52.76 17 A ARG 284 -37.94 -32.49 17 A PHE 295 -58.73 104.86 17 A ASN 296 47.82 29.12 17 A LEU 298 -67.81 97.04 18 A ASP 235 34.71 45.81 18 A THR 237 34.43 39.30 18 A THR 239 -98.45 39.83 18 A ARG 284 -37.29 -32.74 18 A PHE 295 -54.81 106.12 18 A ASN 296 42.27 25.94 19 A LYS 236 -132.69 -36.13 19 A THR 239 -98.51 30.01 19 A GLN 275 36.87 44.30 19 A ARG 284 -35.89 -36.43 19 A PHE 295 -48.32 98.48 19 A LEU 298 -66.45 97.75 20 A THR 237 37.62 40.37 20 A THR 239 -93.92 38.11 20 A TYR 260 -39.84 -27.58 20 A ARG 284 -36.01 -38.12 20 A PHE 295 -53.95 103.01 20 A ASN 296 43.51 26.54 20 A LEU 298 -68.03 98.26 Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 1 N N A THR 251 A THR 25 HELX_P A GLN 261 A GLN 35 1 1 11 A GLN 272 A GLN 46 HELX_P A GLN 274 A GLN 48 5 2 3 A THR 283 A THR 57 HELX_P A LYS 293 A LYS 67 1 3 11 TRANSCRIPTION RRM domain, RBD, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION RBM22_HUMAN UNP 1 227 Q9NW64 EDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGR 227 304 2YTC 234 311 Q9NW64 A 1 8 85 1 expression tag GLY 227 2YTC A Q9NW64 UNP 1 1 expression tag SER 228 2YTC A Q9NW64 UNP 2 1 expression tag SER 229 2YTC A Q9NW64 UNP 3 1 expression tag GLY 230 2YTC A Q9NW64 UNP 4 1 expression tag SER 231 2YTC A Q9NW64 UNP 5 1 expression tag SER 232 2YTC A Q9NW64 UNP 6 1 expression tag GLY 233 2YTC A Q9NW64 UNP 7 4 2 anti-parallel anti-parallel anti-parallel anti-parallel A ILE 265 A ILE 39 A VAL 271 A VAL 45 A CYS 276 A CYS 50 A PHE 281 A PHE 55 A LEU 241 A LEU 15 A GLY 244 A GLY 18 A VAL 307 A VAL 81 A TRP 309 A TRP 83 A ILE 299 A ILE 73 A VAL 300 A VAL 74 A ARG 303 A ARG 77 A ARG 304 A ARG 78