1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Goroncy, A.K. Tomizawa, T. Koshiba, S. Inoue, M. Kigawa, T. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE J.Struct.Funct.Genom. 1345-711X 11 181 188 10.1007/s10969-010-9081-z 20213426 The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein. 2010 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9422.335 Cold shock domain-containing protein E1 FOURTH COLD-SHOCK DOMAIN 1 man polymer UNR protein, N-ras upstream gene protein no no GSSGSSGRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVN KTSGPSSG GSSGSSGRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVN KTSGPSSG A hsk002000864.5 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample CELL-FREE PROTEIN SYNTHESIS KIAA0885 9606 Homo sapiens PLASMID P040114-51 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses repository Initial release Version format compliance 1 0 2008-04-08 1 1 2011-07-13 Y PDBJ Y PDBJ 2007-04-05 REL REL structures with the least restraint violations 100 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY 120 mM 6.0 AMBIENT 296 K torsion angle dynamics 1 fewest violations 1.09mM COLD-SHOCK DOMAIN, 20mM PHOSPHATE BUFFER NA, 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O 90% H2O/10% D2O P.GUNTERT ET AL. refinement CYANA 2.2.2 P.GUNTERT ET AL. structure solution CYANA 2.2.2 BRUKER collection XWINNMR 3.5 FRANK DELAGLIO processing NMRPipe 20060702 BRUCE A. JOHNSON data analysis NMRVIEW 5.0.4 NAOHIRO KOBAYASHI data analysis KUJIRA 0.9821 600 Bruker Avance GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A ARG 8 n 8 ARG 8 A LEU 9 n 9 LEU 9 A LEU 10 n 10 LEU 10 A GLY 11 n 11 GLY 11 A ARG 12 n 12 ARG 12 A ASN 13 n 13 ASN 13 A SER 14 n 14 SER 14 A ASN 15 n 15 ASN 15 A SER 16 n 16 SER 16 A LYS 17 n 17 LYS 17 A ARG 18 n 18 ARG 18 A LEU 19 n 19 LEU 19 A LEU 20 n 20 LEU 20 A GLY 21 n 21 GLY 21 A TYR 22 n 22 TYR 22 A VAL 23 n 23 VAL 23 A ALA 24 n 24 ALA 24 A THR 25 n 25 THR 25 A LEU 26 n 26 LEU 26 A LYS 27 n 27 LYS 27 A ASP 28 n 28 ASP 28 A ASN 29 n 29 ASN 29 A PHE 30 n 30 PHE 30 A GLY 31 n 31 GLY 31 A PHE 32 n 32 PHE 32 A ILE 33 n 33 ILE 33 A GLU 34 n 34 GLU 34 A THR 35 n 35 THR 35 A ALA 36 n 36 ALA 36 A ASN 37 n 37 ASN 37 A HIS 38 n 38 HIS 38 A ASP 39 n 39 ASP 39 A LYS 40 n 40 LYS 40 A GLU 41 n 41 GLU 41 A ILE 42 n 42 ILE 42 A PHE 43 n 43 PHE 43 A PHE 44 n 44 PHE 44 A HIS 45 n 45 HIS 45 A TYR 46 n 46 TYR 46 A SER 47 n 47 SER 47 A GLU 48 n 48 GLU 48 A PHE 49 n 49 PHE 49 A SER 50 n 50 SER 50 A GLY 51 n 51 GLY 51 A ASP 52 n 52 ASP 52 A VAL 53 n 53 VAL 53 A ASP 54 n 54 ASP 54 A SER 55 n 55 SER 55 A LEU 56 n 56 LEU 56 A GLU 57 n 57 GLU 57 A LEU 58 n 58 LEU 58 A GLY 59 n 59 GLY 59 A ASP 60 n 60 ASP 60 A MET 61 n 61 MET 61 A VAL 62 n 62 VAL 62 A GLU 63 n 63 GLU 63 A TYR 64 n 64 TYR 64 A SER 65 n 65 SER 65 A LEU 66 n 66 LEU 66 A SER 67 n 67 SER 67 A LYS 68 n 68 LYS 68 A GLY 69 n 69 GLY 69 A LYS 70 n 70 LYS 70 A GLY 71 n 71 GLY 71 A ASN 72 n 72 ASN 72 A LYS 73 n 73 LYS 73 A VAL 74 n 74 VAL 74 A SER 75 n 75 SER 75 A ALA 76 n 76 ALA 76 A GLU 77 n 77 GLU 77 A LYS 78 n 78 LYS 78 A VAL 79 n 79 VAL 79 A ASN 80 n 80 ASN 80 A LYS 81 n 81 LYS 81 A THR 82 n 82 THR 82 A SER 83 n 83 SER 83 A GLY 84 n 84 GLY 84 A PRO 85 n 85 PRO 85 A SER 86 n 86 SER 86 A SER 87 n 87 SER 87 A GLY 88 n 88 GLY 88 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 42 A O ILE 42 A N ILE 33 A N ILE 33 A O GLU 34 A O GLU 34 A N TYR 22 A N TYR 22 A N LEU 19 A N LEU 19 A O TYR 64 A O TYR 64 A N GLU 63 A N GLU 63 A O ASN 80 A O ASN 80 1 A SER 2 58.34 -171.96 1 A SER 6 59.81 96.92 1 A SER 14 -170.74 -40.39 1 A VAL 23 -53.36 107.80 1 A ASP 28 -98.06 48.76 1 A ASN 29 -178.35 -39.46 1 A THR 35 -62.80 -175.65 1 A SER 67 -153.90 54.62 2 A SER 2 55.49 89.77 2 A SER 6 -107.03 79.71 2 A LEU 10 -172.74 137.88 2 A SER 14 63.01 162.87 2 A SER 16 -160.67 101.92 2 A ARG 18 54.05 85.05 2 A ASP 28 -97.77 40.47 2 A ASN 29 -171.06 -39.96 2 A LYS 70 52.65 89.00 2 A ASN 72 -159.02 -61.41 2 A PRO 85 -69.75 -177.98 3 A SER 3 56.28 -176.82 3 A SER 14 58.33 -174.12 3 A ASP 28 -97.12 40.65 3 A ASN 29 -176.47 -38.10 3 A LYS 73 61.92 179.53 3 A SER 86 60.16 -178.08 4 A ARG 12 56.42 84.93 4 A SER 16 63.13 61.28 4 A VAL 23 -57.82 100.31 4 A ASP 28 -96.10 42.11 4 A ASN 29 -175.03 -41.27 4 A HIS 38 62.94 98.25 4 A ASP 39 -175.85 -38.31 4 A SER 67 -118.04 51.59 4 A LYS 68 -150.52 -62.02 4 A LYS 78 52.95 76.80 4 A SER 83 54.33 85.38 4 A SER 86 -140.96 -67.23 5 A SER 3 -106.27 -68.85 5 A LYS 17 -173.09 92.08 5 A ASP 28 -92.19 47.91 5 A ASN 29 -178.91 -35.51 5 A LYS 68 60.31 175.44 5 A SER 87 -162.18 74.88 6 A SER 3 56.75 -175.90 6 A LEU 9 -161.82 106.17 6 A VAL 23 -58.67 104.66 6 A ASP 28 -101.08 47.47 6 A ASN 29 -178.82 -41.03 6 A PRO 85 -69.78 93.27 6 A SER 87 -114.54 70.89 7 A ARG 8 -167.61 119.15 7 A SER 14 63.13 163.67 7 A VAL 23 -59.88 106.15 7 A ASP 28 -99.09 41.34 7 A ASN 29 -174.96 -39.45 8 A SER 2 -162.31 117.54 8 A SER 5 61.21 178.97 8 A SER 16 56.67 -171.79 8 A VAL 23 -54.16 107.57 8 A ASP 28 -98.47 44.11 8 A ASN 29 -173.75 -42.82 8 A HIS 38 62.86 86.82 8 A ASP 39 -160.02 -41.08 8 A ASP 52 59.83 94.75 8 A LYS 68 59.27 87.06 8 A LYS 70 -155.05 43.22 8 A LYS 73 -161.99 109.20 8 A SER 86 -126.06 -64.32 9 A SER 5 -68.32 88.18 9 A SER 6 -69.02 -178.40 9 A SER 14 56.43 71.60 9 A SER 16 61.90 -172.01 9 A ASP 28 -100.26 42.18 9 A ASN 29 -176.91 -39.71 9 A LYS 73 61.09 99.32 9 A SER 86 -66.47 -174.19 10 A ASN 13 -174.40 -51.81 10 A SER 16 -166.54 -40.09 10 A VAL 23 -53.78 105.41 10 A ASP 28 -91.58 46.81 10 A ASN 29 -177.27 -44.38 10 A ASP 52 -101.65 71.92 10 A LYS 68 61.30 94.88 10 A ASN 72 -153.07 -51.91 10 A LYS 78 57.37 74.63 10 A SER 83 58.03 -176.98 11 A SER 6 -147.27 -69.52 11 A ARG 8 -168.23 105.38 11 A VAL 23 -58.34 104.33 11 A ASP 28 -97.38 45.07 11 A ASN 29 -177.21 -40.74 11 A LYS 70 -151.31 46.49 11 A ASN 72 61.21 179.83 12 A ASN 13 -171.42 98.93 12 A SER 14 -172.18 122.46 12 A LYS 17 -160.13 89.44 12 A ASP 28 -96.17 38.32 12 A ASN 29 -168.64 -46.16 12 A HIS 38 62.84 81.73 12 A ASP 39 -160.12 -41.70 12 A ASP 52 62.61 90.76 12 A LYS 70 -53.68 104.81 12 A SER 86 -152.55 -65.61 13 A LEU 10 57.94 179.74 13 A SER 16 -164.37 34.21 13 A VAL 23 -55.93 104.89 13 A ASP 28 -94.85 38.50 13 A ASN 29 -167.23 -43.70 13 A ASN 72 61.18 169.60 14 A SER 2 57.80 -171.98 14 A ARG 8 -154.01 55.98 14 A ARG 12 -129.82 -55.29 14 A SER 14 60.05 92.01 14 A LYS 17 -170.15 -47.41 14 A ARG 18 57.59 88.44 14 A ASP 28 -95.63 41.53 14 A ASN 29 -174.48 -37.36 14 A LYS 70 62.21 98.98 14 A LYS 73 61.81 93.46 14 A SER 83 55.51 72.01 14 A SER 87 -113.22 -73.68 15 A LEU 9 53.02 80.79 15 A ASN 13 54.46 90.97 15 A SER 14 -111.53 66.03 15 A ASN 15 -156.18 27.59 15 A ASN 29 -178.60 -42.36 15 A SER 67 -114.71 79.86 15 A LYS 68 53.52 85.26 15 A LYS 70 -154.40 62.34 15 A THR 82 -152.22 40.41 15 A SER 86 61.29 86.16 16 A SER 2 62.63 164.53 16 A ARG 8 60.31 94.01 16 A ASN 13 -156.57 29.17 16 A ASN 15 -96.24 43.21 16 A ARG 18 -110.96 77.66 16 A ASP 28 -92.19 45.48 16 A ASN 29 -173.21 -39.90 16 A SER 83 -172.45 -68.96 17 A SER 2 -92.95 56.55 17 A SER 6 -115.60 71.34 17 A ARG 8 -168.60 98.78 17 A ARG 12 -140.70 -45.52 17 A ASP 28 -100.56 40.97 17 A ASN 29 -173.48 -37.47 17 A LYS 68 61.75 170.12 17 A LYS 73 -173.22 119.62 17 A SER 83 -163.96 41.50 18 A SER 2 -168.02 83.25 18 A ASN 13 57.22 82.96 18 A SER 14 -97.34 58.94 18 A ASP 28 -95.14 37.10 18 A ASN 29 -169.41 -50.39 18 A ASP 52 54.63 75.24 18 A LYS 68 59.53 93.99 18 A LYS 73 59.42 74.25 19 A SER 6 -172.34 101.16 19 A ASP 28 -98.30 43.82 19 A ASN 29 -176.42 -36.59 19 A HIS 38 63.19 73.06 19 A ASP 39 -148.91 -47.44 19 A LYS 78 59.65 72.49 19 A THR 82 -140.38 38.58 20 A SER 2 62.54 163.72 20 A SER 3 -138.28 -43.22 20 A ARG 8 57.31 -175.27 20 A LYS 17 -176.03 129.62 20 A ASP 28 -98.20 46.41 20 A ASN 29 -176.70 -37.93 20 A LYS 70 -145.37 29.49 20 A ASN 72 59.27 -174.07 Cold shock domain-containing protein E1 Solution structure of the fourth cold-shock domain of the human KIAA0885 protein (UNR protein) 1 N N RNA BINDING PROTEIN CELL-FREE PROTEIN SYNTHESIS, BETA-BARREL, TRANSLATIONAL REGULATION, RNA CHAPERONE, RNA/DNA BINDING, QB FOLD, GREEK-KEY TOPOLOGY, UNR PROTEIN, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN CSDE1_HUMAN UNP 1 508 O75534 RLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKT 508 582 2YTY 8 82 O75534 A 1 8 82 1 EXPRESSION TAG GLY 1 2YTY A O75534 UNP 1 1 EXPRESSION TAG SER 2 2YTY A O75534 UNP 2 1 EXPRESSION TAG SER 3 2YTY A O75534 UNP 3 1 EXPRESSION TAG GLY 4 2YTY A O75534 UNP 4 1 EXPRESSION TAG SER 5 2YTY A O75534 UNP 5 1 EXPRESSION TAG SER 6 2YTY A O75534 UNP 6 1 EXPRESSION TAG GLY 7 2YTY A O75534 UNP 7 1 EXPRESSION TAG SER 83 2YTY A O75534 UNP 83 1 EXPRESSION TAG GLY 84 2YTY A O75534 UNP 84 1 EXPRESSION TAG PRO 85 2YTY A O75534 UNP 85 1 EXPRESSION TAG SER 86 2YTY A O75534 UNP 86 1 EXPRESSION TAG SER 87 2YTY A O75534 UNP 87 1 EXPRESSION TAG GLY 88 2YTY A O75534 UNP 88 5 anti-parallel anti-parallel anti-parallel anti-parallel A GLU 41 A GLU 41 A HIS 45 A HIS 45 A PHE 30 A PHE 30 A GLU 34 A GLU 34 A LEU 19 A LEU 19 A LEU 26 A LEU 26 A MET 61 A MET 61 A TYR 64 A TYR 64 A ASN 80 A ASN 80 A LYS 81 A LYS 81 1 P 1