1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Niraula, T.N.
Yoneyama, M.
Koshiba, S.
Inoue, M.
Kigawa, T.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
10.2210/pdb2yuy/pdb
pdb_00002yuy
13501.110
Rho GTPase activating protein 21
PDZ domain
1
man
polymer
no
no
GSSGSSGGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLC
TGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSGPSSG
GSSGSSGGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLC
TGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSGPSSG
A
hsk002201396.2
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
cell-free protein synthesis
ARHGAP21
9606
Homo sapiens
plasmid
P051017-09
RIKEN Structural Genomics/Proteomics Initiative
RSGI
NPPSFA, National Project on Protein Structural and Functional Analyses
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
1
0
2008-04-08
1
1
2011-07-13
1
2
2022-03-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Y
PDBJ
Y
PDBJ
2007-04-06
REL
REL
structures with the least restraint violations, target function
100
20
3D_13C-separated_NOESY
3D_15N-separated_NOESY
120mM
7.0
ambient
296
K
torsion angle dynamics
1
lowest energy
1.22mM sample U-15N, 13C; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O
90% H2O/10% D2O
Bruker
collection
XwinNMR
2.6
Delaglio, F.
processing
NMRPipe
20030801
Johnson, B.A.
data analysis
NMRView
5.0.4
Kobayashi, N.
data analysis
KUJIRA
0.9820
Guntert, P.
structure solution
CYANA
1.0.8
Guntert, P.
refinement
CYANA
1.0.8
800
Bruker
AVANCE
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
GLY
8
n
8
GLY
8
A
PRO
9
n
9
PRO
9
A
LYS
10
n
10
LYS
10
A
THR
11
n
11
THR
11
A
VAL
12
n
12
VAL
12
A
THR
13
n
13
THR
13
A
LEU
14
n
14
LEU
14
A
LYS
15
n
15
LYS
15
A
ARG
16
n
16
ARG
16
A
THR
17
n
17
THR
17
A
SER
18
n
18
SER
18
A
GLN
19
n
19
GLN
19
A
GLY
20
n
20
GLY
20
A
PHE
21
n
21
PHE
21
A
GLY
22
n
22
GLY
22
A
PHE
23
n
23
PHE
23
A
THR
24
n
24
THR
24
A
LEU
25
n
25
LEU
25
A
ARG
26
n
26
ARG
26
A
HIS
27
n
27
HIS
27
A
PHE
28
n
28
PHE
28
A
ILE
29
n
29
ILE
29
A
VAL
30
n
30
VAL
30
A
TYR
31
n
31
TYR
31
A
PRO
32
n
32
PRO
32
A
PRO
33
n
33
PRO
33
A
GLU
34
n
34
GLU
34
A
SER
35
n
35
SER
35
A
ALA
36
n
36
ALA
36
A
ILE
37
n
37
ILE
37
A
GLN
38
n
38
GLN
38
A
PHE
39
n
39
PHE
39
A
SER
40
n
40
SER
40
A
TYR
41
n
41
TYR
41
A
LYS
42
n
42
LYS
42
A
ASP
43
n
43
ASP
43
A
GLU
44
n
44
GLU
44
A
GLU
45
n
45
GLU
45
A
ASN
46
n
46
ASN
46
A
GLY
47
n
47
GLY
47
A
ASN
48
n
48
ASN
48
A
ARG
49
n
49
ARG
49
A
GLY
50
n
50
GLY
50
A
GLY
51
n
51
GLY
51
A
LYS
52
n
52
LYS
52
A
GLN
53
n
53
GLN
53
A
ARG
54
n
54
ARG
54
A
ASN
55
n
55
ASN
55
A
ARG
56
n
56
ARG
56
A
LEU
57
n
57
LEU
57
A
GLU
58
n
58
GLU
58
A
PRO
59
n
59
PRO
59
A
MET
60
n
60
MET
60
A
ASP
61
n
61
ASP
61
A
THR
62
n
62
THR
62
A
ILE
63
n
63
ILE
63
A
PHE
64
n
64
PHE
64
A
VAL
65
n
65
VAL
65
A
LYS
66
n
66
LYS
66
A
GLN
67
n
67
GLN
67
A
VAL
68
n
68
VAL
68
A
LYS
69
n
69
LYS
69
A
GLU
70
n
70
GLU
70
A
GLY
71
n
71
GLY
71
A
GLY
72
n
72
GLY
72
A
PRO
73
n
73
PRO
73
A
ALA
74
n
74
ALA
74
A
PHE
75
n
75
PHE
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
GLY
78
n
78
GLY
78
A
LEU
79
n
79
LEU
79
A
CYS
80
n
80
CYS
80
A
THR
81
n
81
THR
81
A
GLY
82
n
82
GLY
82
A
ASP
83
n
83
ASP
83
A
ARG
84
n
84
ARG
84
A
ILE
85
n
85
ILE
85
A
ILE
86
n
86
ILE
86
A
LYS
87
n
87
LYS
87
A
VAL
88
n
88
VAL
88
A
ASN
89
n
89
ASN
89
A
GLY
90
n
90
GLY
90
A
GLU
91
n
91
GLU
91
A
SER
92
n
92
SER
92
A
VAL
93
n
93
VAL
93
A
ILE
94
n
94
ILE
94
A
GLY
95
n
95
GLY
95
A
LYS
96
n
96
LYS
96
A
THR
97
n
97
THR
97
A
TYR
98
n
98
TYR
98
A
SER
99
n
99
SER
99
A
GLN
100
n
100
GLN
100
A
VAL
101
n
101
VAL
101
A
ILE
102
n
102
ILE
102
A
ALA
103
n
103
ALA
103
A
LEU
104
n
104
LEU
104
A
ILE
105
n
105
ILE
105
A
GLN
106
n
106
GLN
106
A
ASN
107
n
107
ASN
107
A
SER
108
n
108
SER
108
A
ASP
109
n
109
ASP
109
A
THR
110
n
110
THR
110
A
THR
111
n
111
THR
111
A
LEU
112
n
112
LEU
112
A
GLU
113
n
113
GLU
113
A
LEU
114
n
114
LEU
114
A
SER
115
n
115
SER
115
A
VAL
116
n
116
VAL
116
A
MET
117
n
117
MET
117
A
PRO
118
n
118
PRO
118
A
LYS
119
n
119
LYS
119
A
ASP
120
n
120
ASP
120
A
SER
121
n
121
SER
121
A
GLY
122
n
122
GLY
122
A
PRO
123
n
123
PRO
123
A
SER
124
n
124
SER
124
A
SER
125
n
125
SER
125
A
GLY
126
n
126
GLY
126
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
14
A
N
LEU
14
A
O
LEU
112
A
O
LEU
112
A
O
SER
115
A
O
SER
115
A
N
LYS
87
A
N
LYS
87
A
N
VAL
88
A
N
VAL
88
A
O
GLU
91
A
O
GLU
91
1
A
A
O
H
LEU
LEU
14
112
1.53
1
A
A
O
H
THR
GLN
97
100
1.56
2
A
A
O
H
ALA
ASN
103
107
1.50
2
A
A
O
H
VAL
GLU
88
91
1.56
2
A
A
O
H
PRO
ALA
73
77
1.58
2
A
A
H
O
ARG
THR
16
110
1.59
5
A
A
O
H
ALA
ASN
103
107
1.53
5
A
A
H
O
ILE
SER
86
115
1.59
6
A
A
H
O
ARG
THR
16
110
1.54
7
A
A
O
H
VAL
GLU
88
91
1.56
8
A
A
O
H
TYR
ILE
98
102
1.50
8
A
A
O
H
VAL
LEU
12
114
1.58
8
A
A
O
H
THR
LYS
24
66
1.59
9
A
A
O
HG
ILE
SER
105
108
1.49
9
A
A
O
H
ALA
ASN
103
107
1.54
9
A
A
O
H
PRO
ALA
73
77
1.57
9
A
A
O
H
TYR
ILE
98
102
1.60
10
A
A
O
H
VAL
LEU
12
114
1.57
11
A
A
O
H
TYR
ILE
98
102
1.52
11
A
A
O
H
LEU
LEU
14
112
1.57
11
A
A
O
H
PRO
ALA
73
77
1.57
12
A
A
O
H
TYR
ILE
98
102
1.53
14
A
A
O
H
PRO
ALA
73
77
1.53
14
A
A
O
HG
LEU
SER
104
108
1.59
17
A
A
O
H
THR
LYS
24
66
1.56
17
A
A
O
H
TYR
ILE
98
102
1.57
17
A
A
O
H
GLY
LYS
22
69
1.58
18
A
A
O
H
PRO
ALA
73
77
1.58
19
A
A
O
H
VAL
LEU
12
114
1.51
19
A
A
O
H
PRO
ALA
73
77
1.52
20
A
A
O
HG
ILE
SER
105
108
1.47
20
A
A
H
O
ILE
SER
86
115
1.53
1
A
SER
2
60.30
161.26
1
A
SER
5
66.08
108.82
1
A
GLN
19
67.01
-70.86
1
A
PHE
23
-66.59
-178.61
1
A
HIS
27
-39.45
140.88
1
A
ILE
29
-51.94
98.52
1
A
VAL
30
-39.75
147.52
1
A
ALA
36
-176.91
-108.55
1
A
ILE
37
59.45
80.80
1
A
GLN
38
-166.37
39.90
1
A
SER
40
56.89
-178.65
1
A
GLU
44
-52.29
173.09
1
A
ARG
49
60.14
164.82
1
A
GLN
53
-123.94
-59.88
1
A
ARG
54
-102.14
-61.88
1
A
ASN
55
68.74
112.50
1
A
PRO
59
-75.04
-83.93
1
A
MET
60
45.07
76.22
1
A
ASP
61
-94.62
-65.24
1
A
PHE
64
61.16
134.24
1
A
LYS
69
-45.27
161.01
1
A
ALA
77
-39.59
-30.59
1
A
CYS
80
-165.22
-164.08
1
A
ASP
109
61.26
-95.38
1
A
THR
110
-92.78
-63.11
2
A
SER
2
-122.94
-59.01
2
A
SER
3
61.88
107.46
2
A
SER
5
-171.61
85.56
2
A
SER
18
169.76
-75.91
2
A
PHE
21
-56.00
171.91
2
A
PHE
23
-46.96
174.22
2
A
HIS
27
69.20
145.44
2
A
ILE
29
40.23
85.51
2
A
SER
35
67.55
-66.07
2
A
ALA
36
65.54
152.26
2
A
ILE
37
-93.43
-101.33
2
A
GLN
38
-101.37
-60.25
2
A
PHE
39
57.19
111.90
2
A
LYS
42
-56.52
-169.92
2
A
ASP
43
-146.07
-52.22
2
A
GLU
45
-166.53
-60.00
2
A
ASN
46
-174.86
-57.17
2
A
ARG
49
-172.49
135.83
2
A
GLN
53
57.65
164.49
2
A
ARG
54
63.66
145.76
2
A
ASN
55
61.07
147.10
2
A
ARG
56
-61.74
-150.62
2
A
LEU
57
-76.63
-153.45
2
A
PRO
59
-74.97
-161.23
2
A
ILE
63
67.92
-68.74
2
A
PHE
64
58.00
158.94
2
A
LYS
69
-49.64
97.18
2
A
GLU
70
-58.91
94.58
2
A
ALA
77
-39.53
-30.46
2
A
CYS
80
-173.45
-155.45
2
A
ASP
109
81.47
-158.78
2
A
LYS
119
-144.71
-67.40
2
A
SER
125
-173.67
113.67
3
A
SER
6
-125.39
-51.74
3
A
SER
18
160.74
-91.08
3
A
PHE
23
-48.80
171.30
3
A
HIS
27
172.64
-71.35
3
A
PHE
28
46.80
28.43
3
A
TYR
31
-159.60
68.12
3
A
PRO
33
-74.96
-162.21
3
A
GLU
34
-95.53
-79.24
3
A
SER
35
-116.79
53.95
3
A
SER
40
-76.85
-167.51
3
A
LYS
42
61.81
94.80
3
A
GLU
44
38.85
84.30
3
A
GLU
45
68.00
165.69
3
A
ASN
48
-164.53
97.25
3
A
LYS
52
-167.45
-59.73
3
A
ASN
55
61.34
123.77
3
A
ARG
56
59.15
-166.24
3
A
PRO
59
-75.04
-88.44
3
A
MET
60
50.17
79.17
3
A
LYS
66
-110.46
-71.07
3
A
GLU
70
-66.99
95.40
3
A
ALA
77
-39.16
-31.96
3
A
LEU
79
-52.08
-179.73
3
A
ASN
89
70.56
37.92
3
A
ILE
94
-50.63
104.93
3
A
TYR
98
66.30
-63.03
3
A
ASP
109
81.86
-157.87
3
A
LEU
114
-128.78
-169.09
3
A
SER
124
66.50
142.78
3
A
SER
125
-101.49
-60.12
4
A
SER
3
-131.60
-55.82
4
A
SER
5
-170.27
149.86
4
A
SER
6
59.72
167.40
4
A
SER
18
52.67
80.61
4
A
GLN
19
42.31
91.94
4
A
PHE
23
46.36
178.33
4
A
HIS
27
-175.32
106.54
4
A
ILE
29
-38.30
114.29
4
A
TYR
31
-179.73
61.82
4
A
GLU
34
62.37
147.46
4
A
ILE
37
61.66
121.06
4
A
GLN
38
-175.67
48.90
4
A
SER
40
175.08
109.26
4
A
GLU
44
-63.71
-169.51
4
A
ASN
48
-174.56
117.12
4
A
ARG
49
-137.72
-56.90
4
A
GLN
53
67.37
168.84
4
A
ARG
54
-173.30
-41.64
4
A
ASN
55
62.23
161.99
4
A
ARG
56
-152.92
66.68
4
A
LEU
57
174.91
73.06
4
A
PRO
59
-74.95
-73.09
4
A
MET
60
-136.66
-45.35
4
A
SER
92
59.00
94.28
4
A
ILE
94
-68.07
90.05
4
A
ASP
109
60.05
-96.22
4
A
THR
110
-92.66
-63.12
4
A
ASP
120
-50.60
108.62
4
A
SER
121
71.18
139.49
4
A
SER
124
178.59
81.06
5
A
SER
2
44.06
88.97
5
A
SER
5
42.89
87.35
5
A
SER
6
-149.96
-51.82
5
A
SER
18
65.07
178.72
5
A
PHE
23
-46.36
169.42
5
A
HIS
27
65.97
114.36
5
A
ILE
29
-123.92
-53.64
5
A
VAL
30
54.28
171.15
5
A
ALA
36
53.24
93.02
5
A
GLN
38
-177.84
86.54
5
A
SER
40
50.88
99.88
5
A
TYR
41
-171.19
124.86
5
A
LYS
42
-178.73
149.00
5
A
ASP
43
60.08
110.54
5
A
GLU
45
27.21
82.99
5
A
ASN
48
-160.96
97.06
5
A
LEU
57
174.81
96.51
5
A
PRO
59
-74.87
-81.95
5
A
MET
60
58.88
166.54
5
A
ASP
61
-148.79
32.03
5
A
THR
62
72.21
-0.99
5
A
ILE
63
57.74
100.67
5
A
LEU
79
-54.89
-177.76
5
A
CYS
80
-172.48
-164.78
5
A
ASN
89
68.06
71.34
5
A
SER
92
-91.31
30.75
5
A
ILE
94
-57.89
99.22
5
A
ASP
109
81.77
-156.02
5
A
SER
121
70.32
132.79
6
A
SER
5
176.29
179.22
6
A
THR
17
-98.42
54.93
6
A
GLN
19
-176.89
-172.72
6
A
PHE
21
55.06
-176.69
6
A
PHE
23
-46.99
169.37
6
A
HIS
27
60.85
152.85
6
A
ILE
29
-68.90
-88.00
6
A
VAL
30
51.40
175.96
6
A
GLU
34
-143.76
-83.08
6
A
ALA
36
-61.73
-93.45
6
A
ILE
37
63.96
77.75
6
A
PHE
39
51.65
174.54
6
A
SER
40
70.42
156.37
6
A
ARG
54
174.50
-50.61
6
A
ASN
55
63.49
84.59
6
A
LEU
57
65.37
75.36
6
A
GLU
58
58.10
157.09
6
A
MET
60
36.03
83.54
6
A
ASP
61
165.08
80.79
6
A
THR
62
-157.85
-95.10
6
A
ILE
63
66.59
116.31
6
A
PHE
75
-38.75
-34.63
6
A
SER
92
58.59
101.22
6
A
VAL
93
-99.21
50.17
6
A
ASP
109
82.98
178.49
6
A
LYS
119
-150.68
-74.49
6
A
SER
124
-178.09
-56.90
6
A
SER
125
56.81
104.86
7
A
SER
2
66.61
170.56
7
A
SER
3
175.97
140.42
7
A
SER
5
63.26
161.37
7
A
SER
6
61.12
153.09
7
A
PHE
21
52.48
173.90
7
A
PHE
23
-53.61
177.96
7
A
HIS
27
-179.28
63.45
7
A
ILE
29
-45.40
-79.09
7
A
VAL
30
50.84
177.59
7
A
TYR
31
-157.81
82.38
7
A
PRO
33
-74.91
-165.77
7
A
GLU
34
-66.04
-78.70
7
A
ALA
36
61.22
167.50
7
A
PHE
39
-157.08
-54.82
7
A
TYR
41
-173.92
-53.33
7
A
ARG
49
60.98
147.04
7
A
GLN
53
54.66
170.95
7
A
ASN
55
66.03
121.48
7
A
ARG
56
-104.88
-160.60
7
A
GLU
58
-47.30
159.94
7
A
PRO
59
-75.05
-75.62
7
A
MET
60
-113.17
-70.92
7
A
ASP
61
64.12
96.15
7
A
THR
62
165.21
-27.23
7
A
ILE
63
66.80
116.80
7
A
LYS
66
-98.11
-60.92
7
A
ALA
77
-39.10
-30.96
7
A
LEU
79
-58.25
-177.98
7
A
CYS
80
-175.46
-165.68
7
A
GLN
100
-77.55
-70.73
7
A
ASP
109
62.46
-100.24
7
A
THR
110
-92.97
-63.77
7
A
SER
121
61.38
155.37
7
A
SER
124
-168.28
99.79
8
A
SER
6
-165.51
111.90
8
A
SER
18
-135.97
-81.70
8
A
PHE
21
-43.37
150.63
8
A
PHE
23
-49.22
174.49
8
A
HIS
27
80.61
91.64
8
A
VAL
30
-102.46
-127.47
8
A
PRO
33
-74.97
-166.60
8
A
GLU
34
-66.53
-171.16
8
A
ALA
36
42.30
-101.71
8
A
ILE
37
-40.15
158.16
8
A
SER
40
-174.19
142.74
8
A
TYR
41
-126.22
-56.36
8
A
GLU
44
57.03
163.63
8
A
GLU
45
64.90
155.10
8
A
ASN
48
177.64
116.59
8
A
GLN
53
-41.75
155.21
8
A
ARG
56
61.69
129.48
8
A
LEU
57
70.77
81.66
8
A
MET
60
-35.73
143.17
8
A
ASP
61
-153.44
40.02
8
A
THR
62
70.90
159.49
8
A
PHE
64
58.98
123.11
8
A
GLU
70
-64.86
93.91
8
A
VAL
88
-114.25
-115.54
8
A
ASN
89
-104.61
58.45
8
A
SER
92
70.12
128.16
8
A
ILE
94
-67.85
94.07
8
A
GLN
100
-57.27
-71.94
8
A
ASP
109
81.41
-151.70
8
A
SER
121
60.89
106.16
9
A
SER
2
58.04
107.54
9
A
SER
5
-160.20
100.80
9
A
SER
6
52.20
88.49
9
A
THR
17
-141.60
13.30
9
A
SER
18
176.39
-152.63
9
A
PHE
21
38.27
40.82
9
A
PHE
23
-51.14
176.45
9
A
HIS
27
72.90
92.42
9
A
VAL
30
54.45
170.74
9
A
TYR
41
-85.22
44.46
9
A
ASP
43
71.42
159.04
9
A
GLU
44
-40.86
108.26
9
A
ARG
49
59.07
-87.56
9
A
ARG
54
60.82
176.00
9
A
ARG
56
-163.68
68.38
9
A
GLU
58
64.60
160.50
9
A
PRO
59
-75.03
-90.31
9
A
ASP
61
76.03
154.66
9
A
ILE
63
-60.12
84.20
9
A
CYS
80
-142.91
-159.94
9
A
VAL
88
-124.26
-122.20
9
A
ASP
109
81.11
-154.67
9
A
ASP
120
71.06
-62.86
9
A
SER
121
168.59
79.62
9
A
SER
125
173.96
-53.42
10
A
SER
5
-173.55
-58.51
10
A
THR
17
-112.34
79.92
10
A
SER
18
77.97
-67.94
10
A
HIS
27
-176.48
82.92
10
A
VAL
30
50.93
177.19
10
A
TYR
31
176.35
75.01
10
A
PRO
33
-74.97
-78.42
10
A
GLU
34
-131.40
-72.10
10
A
ILE
37
52.91
-108.06
10
A
GLN
38
69.49
109.60
10
A
SER
40
67.25
86.42
10
A
ASP
43
-178.49
93.50
10
A
GLU
45
40.66
91.71
10
A
GLN
53
-176.60
131.74
10
A
ASN
55
174.90
-67.08
10
A
PRO
59
-74.98
-72.32
10
A
ILE
63
-96.33
-65.39
10
A
PHE
64
54.69
107.23
10
A
CYS
80
178.15
-165.62
10
A
THR
97
-113.45
51.67
10
A
TYR
98
58.01
-75.30
10
A
SER
99
-37.94
-30.91
10
A
ASP
109
60.34
-91.42
10
A
THR
110
-91.57
-61.64
10
A
VAL
116
-124.04
-168.75
10
A
SER
121
72.63
89.67
10
A
PRO
123
-74.95
-70.92
11
A
SER
3
60.61
87.61
11
A
SER
5
-157.04
-57.85
11
A
THR
17
-83.21
-92.12
11
A
SER
18
-141.03
-66.93
11
A
PHE
21
59.40
-165.92
11
A
HIS
27
67.82
104.99
11
A
TYR
31
-152.20
61.93
11
A
TYR
41
-93.64
48.91
11
A
ASP
43
-173.94
107.70
11
A
GLU
45
-139.62
-59.44
11
A
ARG
54
-39.39
154.75
11
A
ASN
55
-169.60
91.17
11
A
PRO
59
-74.85
-160.77
11
A
ASP
61
-169.88
105.99
11
A
ILE
63
59.82
152.51
11
A
GLU
70
-65.31
98.73
11
A
CYS
80
-164.70
-158.89
11
A
VAL
88
-109.99
-115.34
11
A
ASN
89
-105.19
53.67
11
A
TYR
98
67.56
-61.76
11
A
ASP
109
70.77
-69.80
11
A
THR
110
-94.21
-63.36
11
A
VAL
116
-121.59
-167.23
11
A
SER
121
64.76
-78.23
12
A
SER
3
-160.98
89.99
12
A
SER
5
-161.43
-50.59
12
A
SER
6
-49.50
152.49
12
A
ARG
16
-39.11
111.56
12
A
PHE
21
-142.18
21.46
12
A
HIS
27
179.76
130.33
12
A
ILE
29
79.25
84.61
12
A
PRO
33
-74.96
-162.75
12
A
ALA
36
-110.32
-74.70
12
A
ILE
37
-66.51
95.90
12
A
SER
40
177.74
97.24
12
A
TYR
41
-167.55
-59.59
12
A
LYS
42
-160.53
115.75
12
A
LYS
52
-176.24
132.22
12
A
ARG
54
-178.42
-51.28
12
A
ASN
55
56.53
98.58
12
A
ASP
61
-80.99
-78.05
12
A
LYS
69
-49.96
106.56
12
A
GLU
70
-62.91
86.39
12
A
GLN
100
-51.28
-70.29
12
A
ASP
109
81.78
-152.10
12
A
VAL
116
-127.40
-164.84
12
A
PRO
123
-75.01
-73.04
12
A
SER
124
62.31
72.36
13
A
SER
6
40.44
82.92
13
A
ARG
16
-39.30
113.76
13
A
THR
17
-125.81
-53.39
13
A
GLN
19
54.93
-178.76
13
A
PHE
23
-45.92
173.02
13
A
HIS
27
59.05
80.75
13
A
VAL
30
-108.18
-128.99
13
A
PRO
33
-75.08
-162.47
13
A
GLU
34
-122.60
-51.22
13
A
PHE
39
42.95
84.48
13
A
SER
40
51.62
99.75
13
A
TYR
41
60.78
175.07
13
A
ASP
43
178.50
110.08
13
A
GLU
45
-174.99
-57.70
13
A
ASN
46
-172.55
126.45
13
A
ASN
48
62.84
116.53
13
A
LYS
52
60.74
96.73
13
A
ARG
54
24.14
83.90
13
A
ARG
56
-109.61
73.07
13
A
LEU
57
52.99
79.68
13
A
GLU
58
-45.09
160.11
13
A
PRO
59
-74.99
-160.82
13
A
MET
60
-123.82
-54.55
13
A
ASP
61
-40.67
152.03
13
A
THR
62
-137.47
-152.11
13
A
LYS
66
-122.60
-60.94
13
A
SER
92
61.33
105.26
13
A
VAL
93
-89.77
48.75
13
A
LYS
96
-42.65
151.72
13
A
THR
97
-85.47
-154.29
13
A
ASP
109
76.84
-156.03
13
A
ASP
120
63.41
102.09
13
A
SER
121
-40.80
-72.52
13
A
SER
125
39.90
83.66
14
A
SER
3
-59.97
170.54
14
A
SER
6
51.18
91.43
14
A
PRO
9
-74.91
-162.90
14
A
SER
18
-172.24
-75.40
14
A
PHE
23
-45.88
170.68
14
A
HIS
27
-178.14
102.42
14
A
VAL
30
50.19
177.92
14
A
GLU
34
85.97
-45.44
14
A
ALA
36
177.80
108.34
14
A
SER
40
-51.35
175.63
14
A
TYR
41
-85.67
44.00
14
A
ASP
43
-155.48
-57.71
14
A
ASN
48
-121.68
-59.34
14
A
LYS
52
-179.54
99.04
14
A
GLN
53
-176.69
-61.40
14
A
PRO
59
-74.96
-161.09
14
A
ASP
61
-178.06
94.92
14
A
GLU
70
-69.22
92.82
14
A
ASN
89
48.39
27.74
14
A
SER
92
62.46
144.46
14
A
THR
97
-114.80
62.38
14
A
TYR
98
55.53
-83.39
14
A
SER
99
-35.61
-34.62
14
A
ASP
109
84.15
-176.72
14
A
MET
117
-141.58
49.25
14
A
SER
124
72.42
-61.61
15
A
SER
2
-153.52
-62.03
15
A
SER
3
58.78
155.99
15
A
ARG
16
-38.13
111.79
15
A
THR
17
-122.06
-51.86
15
A
PHE
21
50.80
178.17
15
A
PHE
23
-51.09
172.27
15
A
HIS
27
-94.58
41.87
15
A
PHE
28
-48.50
179.97
15
A
SER
35
39.88
34.95
15
A
ALA
36
-109.32
73.35
15
A
ILE
37
-105.73
-99.86
15
A
GLN
38
65.38
75.57
15
A
TYR
41
-168.22
-67.93
15
A
LYS
42
-115.59
57.75
15
A
GLU
45
-43.75
164.14
15
A
ASN
46
56.21
102.69
15
A
ASN
48
-160.96
-55.81
15
A
LYS
52
-176.09
130.51
15
A
ASP
61
-151.16
88.49
15
A
GLU
70
-65.68
91.79
15
A
VAL
93
-92.16
37.21
15
A
LYS
96
-44.59
153.48
15
A
ASP
109
75.23
-157.42
15
A
SER
121
66.91
128.95
15
A
SER
124
-140.33
-61.83
16
A
SER
5
61.00
111.90
16
A
SER
18
68.18
-79.24
16
A
GLN
19
-143.95
-55.11
16
A
PHE
23
-48.06
167.63
16
A
ARG
26
-172.29
132.69
16
A
PHE
28
-141.92
-47.80
16
A
ILE
29
-40.73
102.87
16
A
VAL
30
-93.79
-105.20
16
A
TYR
31
60.58
101.87
16
A
GLU
34
-144.93
-70.67
16
A
SER
35
-141.09
39.35
16
A
SER
40
72.89
153.35
16
A
GLU
44
-69.52
82.16
16
A
GLU
45
177.92
73.40
16
A
ASN
46
176.77
167.86
16
A
ARG
49
177.08
156.20
16
A
LYS
52
-171.82
60.83
16
A
GLN
53
65.65
134.00
16
A
ASN
55
179.22
155.40
16
A
MET
60
-168.37
103.52
16
A
LYS
69
-42.39
98.36
16
A
GLU
70
-59.27
86.44
16
A
ASN
89
39.09
57.38
16
A
SER
92
65.27
128.83
16
A
VAL
93
-109.53
54.57
16
A
ASP
109
79.72
-157.07
16
A
LYS
119
-140.20
-64.54
16
A
SER
124
177.35
158.21
17
A
SER
2
-40.05
107.40
17
A
SER
18
-163.20
119.67
17
A
GLN
19
63.82
-172.97
17
A
PHE
28
-170.63
-150.48
17
A
ILE
29
52.70
92.80
17
A
GLU
34
-174.25
-52.66
17
A
SER
35
-127.53
-53.61
17
A
ALA
36
-47.47
105.91
17
A
TYR
41
39.59
-156.58
17
A
LYS
42
40.00
74.14
17
A
ASP
43
175.53
139.18
17
A
GLU
45
41.60
-162.34
17
A
ASN
46
178.14
177.48
17
A
ASN
48
-171.92
139.88
17
A
ARG
49
-171.12
142.41
17
A
ARG
54
64.06
-76.62
17
A
ASN
55
79.10
155.26
17
A
GLU
58
-42.97
165.40
17
A
MET
60
73.40
88.27
17
A
PHE
64
55.52
112.13
17
A
ASN
89
45.18
27.61
17
A
SER
92
58.27
98.78
17
A
GLN
100
-69.68
-72.24
17
A
ASP
109
75.37
-175.67
17
A
MET
117
-163.98
54.07
17
A
LYS
119
-154.73
-76.67
17
A
ASP
120
-60.06
99.46
17
A
SER
125
59.20
154.26
18
A
SER
2
54.36
92.87
18
A
PRO
9
-75.05
-165.29
18
A
SER
18
-52.91
-173.49
18
A
GLN
19
-49.19
103.03
18
A
PHE
21
-90.57
41.29
18
A
HIS
27
68.51
119.30
18
A
TYR
31
-153.95
60.06
18
A
PRO
33
-75.03
-166.86
18
A
SER
35
-127.28
-57.63
18
A
ALA
36
55.01
173.79
18
A
SER
40
-170.01
96.10
18
A
GLU
44
-110.69
-74.75
18
A
ASN
46
59.22
169.96
18
A
ASN
48
179.51
92.41
18
A
LYS
52
64.67
-80.18
18
A
GLN
53
60.81
175.38
18
A
ARG
54
63.45
170.29
18
A
ARG
56
-179.20
141.49
18
A
GLU
58
67.59
164.58
18
A
MET
60
-145.07
-64.38
18
A
LYS
69
-46.22
170.72
18
A
LEU
79
-64.50
-176.14
18
A
CYS
80
-178.29
-161.46
18
A
ASN
89
48.20
24.85
18
A
SER
92
73.50
138.88
18
A
VAL
93
-90.66
41.90
18
A
LYS
96
-44.39
161.18
18
A
TYR
98
56.68
-78.58
18
A
SER
99
-37.35
-31.91
18
A
ASP
109
80.58
-151.63
18
A
VAL
116
-129.34
-166.27
18
A
MET
117
-165.82
55.24
18
A
LYS
119
-141.59
-62.23
19
A
ARG
16
-39.20
113.20
19
A
THR
17
-152.80
28.66
19
A
SER
18
-172.08
-172.14
19
A
PHE
21
-166.90
-77.71
19
A
PHE
23
-177.37
-177.04
19
A
HIS
27
163.17
168.42
19
A
PHE
28
173.52
-33.08
19
A
ILE
29
-53.51
95.66
19
A
GLU
34
61.44
-75.79
19
A
ALA
36
177.96
171.15
19
A
PHE
39
-178.83
125.59
19
A
LYS
42
-103.33
-61.15
19
A
ASP
43
-178.75
-54.05
19
A
ASN
48
176.34
-55.02
19
A
LYS
52
-131.25
-65.55
19
A
ARG
54
-179.62
135.42
19
A
ARG
56
-148.71
45.57
19
A
LEU
57
67.34
72.49
19
A
GLU
58
56.45
163.10
19
A
PRO
59
-74.99
-161.19
19
A
ASP
61
-60.02
84.09
19
A
ILE
63
-107.33
-63.95
19
A
PHE
64
57.72
117.57
19
A
LYS
69
-39.86
136.53
19
A
LEU
79
-68.37
-177.07
19
A
CYS
80
179.36
-165.43
19
A
SER
92
-38.65
115.42
19
A
THR
97
-119.25
60.93
19
A
TYR
98
56.15
-80.63
19
A
SER
99
-37.43
-31.17
19
A
ASP
109
81.18
-152.18
19
A
LEU
112
-160.48
114.53
19
A
LYS
119
-138.96
-51.02
19
A
ASP
120
-146.57
-55.48
19
A
SER
121
-44.21
163.75
20
A
SER
2
60.76
79.19
20
A
SER
18
175.23
-177.51
20
A
PHE
23
-43.90
167.80
20
A
HIS
27
67.52
111.98
20
A
TYR
31
-158.06
75.09
20
A
SER
35
68.31
-61.42
20
A
SER
40
179.04
97.16
20
A
LYS
42
62.42
139.09
20
A
ASP
43
-174.32
-53.70
20
A
GLU
44
51.29
175.89
20
A
GLU
45
59.66
150.73
20
A
ASN
46
57.97
163.90
20
A
ASN
48
173.44
125.74
20
A
ASN
55
179.89
151.75
20
A
ARG
56
-166.92
34.35
20
A
LEU
57
-105.66
73.17
20
A
PRO
59
-74.92
-71.46
20
A
MET
60
62.14
166.09
20
A
LYS
69
-40.93
153.37
20
A
ALA
77
-39.42
-30.74
20
A
LEU
79
-51.52
-178.73
20
A
CYS
80
-168.14
-164.89
20
A
ASN
89
33.21
44.00
20
A
SER
92
85.33
111.26
20
A
GLN
100
-72.65
-71.04
20
A
ASP
109
81.06
-151.79
20
A
VAL
116
-118.34
-168.91
20
A
LYS
119
-153.20
-77.15
Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
1
N
N
A
GLY
72
A
GLY
72
HELX_P
A
GLY
78
A
GLY
78
1
1
7
A
THR
97
A
THR
97
HELX_P
A
ASN
107
A
ASN
107
1
2
11
SIGNALING PROTEIN
PDZ domain, Rho GTPase activating protein 21, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN
Q5T5U3_HUMAN
UNP
1
46
Q5T5U3
GPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRIIK
VNGESVIGKTYSQVIALIQNSDTTLELSVMPKD
46
158
2YUY
8
120
Q5T5U3
A
1
8
120
1
expression tag
GLY
1
2YUY
A
Q5T5U3
UNP
1
1
expression tag
SER
2
2YUY
A
Q5T5U3
UNP
2
1
expression tag
SER
3
2YUY
A
Q5T5U3
UNP
3
1
expression tag
GLY
4
2YUY
A
Q5T5U3
UNP
4
1
expression tag
SER
5
2YUY
A
Q5T5U3
UNP
5
1
expression tag
SER
6
2YUY
A
Q5T5U3
UNP
6
1
expression tag
GLY
7
2YUY
A
Q5T5U3
UNP
7
1
expression tag
SER
121
2YUY
A
Q5T5U3
UNP
121
1
expression tag
GLY
122
2YUY
A
Q5T5U3
UNP
122
1
expression tag
PRO
123
2YUY
A
Q5T5U3
UNP
123
1
expression tag
SER
124
2YUY
A
Q5T5U3
UNP
124
1
expression tag
SER
125
2YUY
A
Q5T5U3
UNP
125
1
expression tag
GLY
126
2YUY
A
Q5T5U3
UNP
126
4
anti-parallel
anti-parallel
anti-parallel
A
VAL
12
A
VAL
12
A
LYS
15
A
LYS
15
A
THR
111
A
THR
111
A
SER
115
A
SER
115
A
LYS
87
A
LYS
87
A
VAL
88
A
VAL
88
A
GLU
91
A
GLU
91
A
SER
92
A
SER
92