0.007434
0.000000
0.000000
0.000000
0.007434
0.000000
0.000000
0.000000
0.010075
0.00000
0.00000
0.00000
Hashiguchi, T.
Kajikawa, M.
Maita, N.
Takeda, M.
Kuroki, K.
Sasaki, K.
Kohda, D.
Yanagi, Y.
Maenaka, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
134.523
134.523
99.251
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.Usa
PNASA6
0040
0027-8424
104
19535
19540
10.1073/pnas.0707830104
18003910
Crystal structure of measles virus hemagglutinin provides insight into effective vaccines
2007
10.2210/pdb2zb5/pdb
pdb_00002zb5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2007-04-18
ADSC QUANTUM 315
Numerical link type Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
BL-5A
Photon Factory
0.979
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-5A
53423.656
Hemagglutinin protein
head domain, UNP residues 149-617
N484T, E492G
1
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
non-polymer
no
no
ETGDYDQYCADVAAEELMNALVNSTLLETRTTNQFLAVSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQ
GMYGGTYLVEKPNLSSKRSELSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDS
ITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQA
CKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALG
VINTLEWIPRFKVSPYLFTVPIKEAGGDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSP
SRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCTVTREDGTNRRGTKHHHHH
H
ETGDYDQYCADVAAEELMNALVNSTLLETRTTNQFLAVSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQ
GMYGGTYLVEKPNLSSKRSELSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDS
ITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQA
CKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALG
VINTLEWIPRFKVSPYLFTVPIKEAGGDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSP
SRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCTVTREDGTNRRGTKHHHHH
H
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Morbillivirus
Measles virus
Edmonston B
human
Homo
sample
70146
Measles virus strain Edmonston-B
HEK293T
9606
Kidney
Homo sapiens
PLASMID
pCA7sec
1
4.20
70.73
VAPOR DIFFUSION, HANGING DROP
6.5
200mM NaCl, 100mM sodium cacodylate, pH 6.5, 10% polyethylene glycol 8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
database_2
struct_ref_seq_dif
repository
Initial release
Carbohydrate remediation
repository
Remediation
Non-polymer description
Version format compliance
Data collection
Database references
Derived calculations
Structure summary
Database references
Structure summary
1
0
2007-11-06
1
1
2011-07-13
1
2
2020-07-29
1
3
2021-11-10
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
The same protein in complex with oligo sugar
PDBJ
Y
PDBJ
2007-10-16
REL
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
NAG
1
2
NAG
NAG
1
A
NAG
11
2
NAG
NAG
11
A
n
1
146
A
n
2
147
A
n
3
148
A
n
4
149
A
n
5
150
A
n
6
151
A
n
7
152
A
n
8
153
A
CYS
154
n
9
CYS
154
A
ALA
155
n
10
ALA
155
A
ALA
156
n
11
ASP
156
A
ALA
157
n
12
VAL
157
A
ALA
158
n
13
ALA
158
A
ALA
159
n
14
ALA
159
A
ALA
160
n
15
GLU
160
A
ALA
161
n
16
GLU
161
A
ALA
162
n
17
LEU
162
A
MET
163
n
18
MET
163
A
ALA
164
n
19
ASN
164
A
ALA
165
n
20
ALA
165
A
ALA
166
n
21
LEU
166
A
ALA
167
n
22
VAL
167
A
ALA
168
n
23
ASN
168
A
n
24
169
A
n
25
170
A
n
26
171
A
n
27
172
A
n
28
173
A
n
29
174
A
n
30
175
A
n
31
176
A
n
32
177
A
n
33
178
A
n
34
179
A
n
35
180
A
n
36
181
A
n
37
182
A
n
38
183
A
n
39
184
A
n
40
185
A
n
41
186
A
ALA
187
n
42
ASN
187
A
CYS
188
n
43
CYS
188
A
SER
189
n
44
SER
189
A
GLY
190
n
45
GLY
190
A
PRO
191
n
46
PRO
191
A
THR
192
n
47
THR
192
A
THR
193
n
48
THR
193
A
ILE
194
n
49
ILE
194
A
ARG
195
n
50
ARG
195
A
GLY
196
n
51
GLY
196
A
GLN
197
n
52
GLN
197
A
PHE
198
n
53
PHE
198
A
SER
199
n
54
SER
199
A
ASN
200
n
55
ASN
200
A
MET
201
n
56
MET
201
A
SER
202
n
57
SER
202
A
LEU
203
n
58
LEU
203
A
SER
204
n
59
SER
204
A
LEU
205
n
60
LEU
205
A
LEU
206
n
61
LEU
206
A
ASP
207
n
62
ASP
207
A
LEU
208
n
63
LEU
208
A
TYR
209
n
64
TYR
209
A
LEU
210
n
65
LEU
210
A
GLY
211
n
66
GLY
211
A
ARG
212
n
67
ARG
212
A
GLY
213
n
68
GLY
213
A
TYR
214
n
69
TYR
214
A
ASN
215
n
70
ASN
215
A
VAL
216
n
71
VAL
216
A
SER
217
n
72
SER
217
A
SER
218
n
73
SER
218
A
ILE
219
n
74
ILE
219
A
VAL
220
n
75
VAL
220
A
THR
221
n
76
THR
221
A
MET
222
n
77
MET
222
A
THR
223
n
78
THR
223
A
SER
224
n
79
SER
224
A
GLN
225
n
80
GLN
225
A
GLY
226
n
81
GLY
226
A
MET
227
n
82
MET
227
A
TYR
228
n
83
TYR
228
A
GLY
229
n
84
GLY
229
A
GLY
230
n
85
GLY
230
A
THR
231
n
86
THR
231
A
TYR
232
n
87
TYR
232
A
LEU
233
n
88
LEU
233
A
VAL
234
n
89
VAL
234
A
GLU
235
n
90
GLU
235
A
LYS
236
n
91
LYS
236
A
PRO
237
n
92
PRO
237
A
ASN
238
n
93
ASN
238
A
n
94
239
A
n
95
240
A
n
96
241
A
n
97
242
A
n
98
243
A
n
99
244
A
n
100
245
A
n
101
246
A
n
102
247
A
ALA
248
n
103
GLN
248
A
LEU
249
n
104
LEU
249
A
SER
250
n
105
SER
250
A
MET
251
n
106
MET
251
A
TYR
252
n
107
TYR
252
A
ARG
253
n
108
ARG
253
A
VAL
254
n
109
VAL
254
A
PHE
255
n
110
PHE
255
A
GLU
256
n
111
GLU
256
A
VAL
257
n
112
VAL
257
A
GLY
258
n
113
GLY
258
A
VAL
259
n
114
VAL
259
A
ILE
260
n
115
ILE
260
A
ARG
261
n
116
ARG
261
A
ASN
262
n
117
ASN
262
A
PRO
263
n
118
PRO
263
A
GLY
264
n
119
GLY
264
A
LEU
265
n
120
LEU
265
A
GLY
266
n
121
GLY
266
A
ALA
267
n
122
ALA
267
A
PRO
268
n
123
PRO
268
A
VAL
269
n
124
VAL
269
A
PHE
270
n
125
PHE
270
A
HIS
271
n
126
HIS
271
A
MET
272
n
127
MET
272
A
THR
273
n
128
THR
273
A
ASN
274
n
129
ASN
274
A
TYR
275
n
130
TYR
275
A
LEU
276
n
131
LEU
276
A
GLU
277
n
132
GLU
277
A
GLN
278
n
133
GLN
278
A
PRO
279
n
134
PRO
279
A
VAL
280
n
135
VAL
280
A
SER
281
n
136
SER
281
A
ASN
282
n
137
ASN
282
A
ASP
283
n
138
ASP
283
A
LEU
284
n
139
LEU
284
A
SER
285
n
140
SER
285
A
ASN
286
n
141
ASN
286
A
CYS
287
n
142
CYS
287
A
MET
288
n
143
MET
288
A
VAL
289
n
144
VAL
289
A
ALA
290
n
145
ALA
290
A
LEU
291
n
146
LEU
291
A
GLY
292
n
147
GLY
292
A
GLU
293
n
148
GLU
293
A
LEU
294
n
149
LEU
294
A
LYS
295
n
150
LYS
295
A
LEU
296
n
151
LEU
296
A
ALA
297
n
152
ALA
297
A
ALA
298
n
153
ALA
298
A
LEU
299
n
154
LEU
299
A
CYS
300
n
155
CYS
300
A
HIS
301
n
156
HIS
301
A
GLY
302
n
157
GLY
302
A
GLU
303
n
158
GLU
303
A
ASP
304
n
159
ASP
304
A
SER
305
n
160
SER
305
A
ILE
306
n
161
ILE
306
A
THR
307
n
162
THR
307
A
ILE
308
n
163
ILE
308
A
PRO
309
n
164
PRO
309
A
TYR
310
n
165
TYR
310
A
GLN
311
n
166
GLN
311
A
GLY
312
n
167
GLY
312
A
SER
313
n
168
SER
313
A
GLY
314
n
169
GLY
314
A
LYS
315
n
170
LYS
315
A
GLY
316
n
171
GLY
316
A
VAL
317
n
172
VAL
317
A
SER
318
n
173
SER
318
A
PHE
319
n
174
PHE
319
A
GLN
320
n
175
GLN
320
A
LEU
321
n
176
LEU
321
A
VAL
322
n
177
VAL
322
A
LYS
323
n
178
LYS
323
A
LEU
324
n
179
LEU
324
A
GLY
325
n
180
GLY
325
A
VAL
326
n
181
VAL
326
A
TRP
327
n
182
TRP
327
A
LYS
328
n
183
LYS
328
A
SER
329
n
184
SER
329
A
PRO
330
n
185
PRO
330
A
THR
331
n
186
THR
331
A
ASP
332
n
187
ASP
332
A
MET
333
n
188
MET
333
A
GLN
334
n
189
GLN
334
A
SER
335
n
190
SER
335
A
TRP
336
n
191
TRP
336
A
VAL
337
n
192
VAL
337
A
PRO
338
n
193
PRO
338
A
LEU
339
n
194
LEU
339
A
SER
340
n
195
SER
340
A
THR
341
n
196
THR
341
A
ASP
342
n
197
ASP
342
A
ASP
343
n
198
ASP
343
A
PRO
344
n
199
PRO
344
A
VAL
345
n
200
VAL
345
A
ILE
346
n
201
ILE
346
A
ASP
347
n
202
ASP
347
A
ARG
348
n
203
ARG
348
A
LEU
349
n
204
LEU
349
A
TYR
350
n
205
TYR
350
A
LEU
351
n
206
LEU
351
A
SER
352
n
207
SER
352
A
SER
353
n
208
SER
353
A
HIS
354
n
209
HIS
354
A
ARG
355
n
210
ARG
355
A
GLY
356
n
211
GLY
356
A
VAL
357
n
212
VAL
357
A
ILE
358
n
213
ILE
358
A
ALA
359
n
214
ALA
359
A
ASP
360
n
215
ASP
360
A
ASN
361
n
216
ASN
361
A
GLN
362
n
217
GLN
362
A
ALA
363
n
218
ALA
363
A
LYS
364
n
219
LYS
364
A
TRP
365
n
220
TRP
365
A
ALA
366
n
221
ALA
366
A
VAL
367
n
222
VAL
367
A
PRO
368
n
223
PRO
368
A
THR
369
n
224
THR
369
A
THR
370
n
225
THR
370
A
ARG
371
n
226
ARG
371
A
THR
372
n
227
THR
372
A
ASP
373
n
228
ASP
373
A
ASP
374
n
229
ASP
374
A
LYS
375
n
230
LYS
375
A
LEU
376
n
231
LEU
376
A
ARG
377
n
232
ARG
377
A
MET
378
n
233
MET
378
A
GLU
379
n
234
GLU
379
A
THR
380
n
235
THR
380
A
CYS
381
n
236
CYS
381
A
PHE
382
n
237
PHE
382
A
GLN
383
n
238
GLN
383
A
GLN
384
n
239
GLN
384
A
ALA
385
n
240
ALA
385
A
CYS
386
n
241
CYS
386
A
LYS
387
n
242
LYS
387
A
GLY
388
n
243
GLY
388
A
LYS
389
n
244
LYS
389
A
ILE
390
n
245
ILE
390
A
GLN
391
n
246
GLN
391
A
ALA
392
n
247
ALA
392
A
LEU
393
n
248
LEU
393
A
CYS
394
n
249
CYS
394
A
GLU
395
n
250
GLU
395
A
ASN
396
n
251
ASN
396
A
PRO
397
n
252
PRO
397
A
GLU
398
n
253
GLU
398
A
TRP
399
n
254
TRP
399
A
ALA
400
n
255
ALA
400
A
PRO
401
n
256
PRO
401
A
LEU
402
n
257
LEU
402
A
LYS
403
n
258
LYS
403
A
ASP
404
n
259
ASP
404
A
ASN
405
n
260
ASN
405
A
ARG
406
n
261
ARG
406
A
ILE
407
n
262
ILE
407
A
PRO
408
n
263
PRO
408
A
SER
409
n
264
SER
409
A
TYR
410
n
265
TYR
410
A
GLY
411
n
266
GLY
411
A
VAL
412
n
267
VAL
412
A
LEU
413
n
268
LEU
413
A
SER
414
n
269
SER
414
A
VAL
415
n
270
VAL
415
A
ASP
416
n
271
ASP
416
A
LEU
417
n
272
LEU
417
A
SER
418
n
273
SER
418
A
LEU
419
n
274
LEU
419
A
THR
420
n
275
THR
420
A
VAL
421
n
276
VAL
421
A
GLU
422
n
277
GLU
422
A
LEU
423
n
278
LEU
423
A
LYS
424
n
279
LYS
424
A
ILE
425
n
280
ILE
425
A
LYS
426
n
281
LYS
426
A
ILE
427
n
282
ILE
427
A
ALA
428
n
283
ALA
428
A
SER
429
n
284
SER
429
A
GLY
430
n
285
GLY
430
A
PHE
431
n
286
PHE
431
A
GLY
432
n
287
GLY
432
A
PRO
433
n
288
PRO
433
A
LEU
434
n
289
LEU
434
A
ILE
435
n
290
ILE
435
A
THR
436
n
291
THR
436
A
HIS
437
n
292
HIS
437
A
GLY
438
n
293
GLY
438
A
SER
439
n
294
SER
439
A
GLY
440
n
295
GLY
440
A
MET
441
n
296
MET
441
A
ASP
442
n
297
ASP
442
A
LEU
443
n
298
LEU
443
A
TYR
444
n
299
TYR
444
A
LYS
445
n
300
LYS
445
A
SER
446
n
301
SER
446
A
ASN
447
n
302
ASN
447
A
HIS
448
n
303
HIS
448
A
ASN
449
n
304
ASN
449
A
ASN
450
n
305
ASN
450
A
VAL
451
n
306
VAL
451
A
TYR
452
n
307
TYR
452
A
TRP
453
n
308
TRP
453
A
LEU
454
n
309
LEU
454
A
THR
455
n
310
THR
455
A
ILE
456
n
311
ILE
456
A
PRO
457
n
312
PRO
457
A
PRO
458
n
313
PRO
458
A
MET
459
n
314
MET
459
A
LYS
460
n
315
LYS
460
A
ASN
461
n
316
ASN
461
A
LEU
462
n
317
LEU
462
A
ALA
463
n
318
ALA
463
A
LEU
464
n
319
LEU
464
A
GLY
465
n
320
GLY
465
A
VAL
466
n
321
VAL
466
A
ILE
467
n
322
ILE
467
A
ASN
468
n
323
ASN
468
A
THR
469
n
324
THR
469
A
LEU
470
n
325
LEU
470
A
GLU
471
n
326
GLU
471
A
TRP
472
n
327
TRP
472
A
ILE
473
n
328
ILE
473
A
PRO
474
n
329
PRO
474
A
ARG
475
n
330
ARG
475
A
PHE
476
n
331
PHE
476
A
LYS
477
n
332
LYS
477
A
VAL
478
n
333
VAL
478
A
SER
479
n
334
SER
479
A
PRO
480
n
335
PRO
480
A
TYR
481
n
336
TYR
481
A
LEU
482
n
337
LEU
482
A
PHE
483
n
338
PHE
483
A
THR
484
n
339
THR
484
A
VAL
485
n
340
VAL
485
A
PRO
486
n
341
PRO
486
A
ILE
487
n
342
ILE
487
A
LYS
488
n
343
LYS
488
A
GLU
489
n
344
GLU
489
A
ALA
490
n
345
ALA
490
A
GLY
491
n
346
GLY
491
A
GLY
492
n
347
GLY
492
A
ASP
493
n
348
ASP
493
A
CYS
494
n
349
CYS
494
A
HIS
495
n
350
HIS
495
A
ALA
496
n
351
ALA
496
A
PRO
497
n
352
PRO
497
A
THR
498
n
353
THR
498
A
TYR
499
n
354
TYR
499
A
LEU
500
n
355
LEU
500
A
PRO
501
n
356
PRO
501
A
n
357
502
A
n
358
503
A
n
359
504
A
ALA
505
n
360
ASP
505
A
GLY
506
n
361
GLY
506
A
ASP
507
n
362
ASP
507
A
VAL
508
n
363
VAL
508
A
LYS
509
n
364
LYS
509
A
LEU
510
n
365
LEU
510
A
SER
511
n
366
SER
511
A
SER
512
n
367
SER
512
A
ASN
513
n
368
ASN
513
A
LEU
514
n
369
LEU
514
A
VAL
515
n
370
VAL
515
A
ILE
516
n
371
ILE
516
A
LEU
517
n
372
LEU
517
A
PRO
518
n
373
PRO
518
A
GLY
519
n
374
GLY
519
A
GLN
520
n
375
GLN
520
A
ASP
521
n
376
ASP
521
A
LEU
522
n
377
LEU
522
A
GLN
523
n
378
GLN
523
A
TYR
524
n
379
TYR
524
A
VAL
525
n
380
VAL
525
A
LEU
526
n
381
LEU
526
A
ALA
527
n
382
ALA
527
A
THR
528
n
383
THR
528
A
TYR
529
n
384
TYR
529
A
ASP
530
n
385
ASP
530
A
THR
531
n
386
THR
531
A
SER
532
n
387
SER
532
A
ARG
533
n
388
ARG
533
A
VAL
534
n
389
VAL
534
A
GLU
535
n
390
GLU
535
A
HIS
536
n
391
HIS
536
A
ALA
537
n
392
ALA
537
A
VAL
538
n
393
VAL
538
A
VAL
539
n
394
VAL
539
A
TYR
540
n
395
TYR
540
A
TYR
541
n
396
TYR
541
A
VAL
542
n
397
VAL
542
A
TYR
543
n
398
TYR
543
A
SER
544
n
399
SER
544
A
PRO
545
n
400
PRO
545
A
SER
546
n
401
SER
546
A
ARG
547
n
402
ARG
547
A
SER
548
n
403
SER
548
A
PHE
549
n
404
PHE
549
A
SER
550
n
405
SER
550
A
TYR
551
n
406
TYR
551
A
PHE
552
n
407
PHE
552
A
TYR
553
n
408
TYR
553
A
PRO
554
n
409
PRO
554
A
PHE
555
n
410
PHE
555
A
SER
556
n
411
ARG
556
A
LEU
557
n
412
LEU
557
A
PRO
558
n
413
PRO
558
A
ALA
559
n
414
ILE
559
A
ALA
560
n
415
LYS
560
A
GLY
561
n
416
GLY
561
A
VAL
562
n
417
VAL
562
A
PRO
563
n
418
PRO
563
A
ILE
564
n
419
ILE
564
A
GLU
565
n
420
GLU
565
A
LEU
566
n
421
LEU
566
A
GLN
567
n
422
GLN
567
A
VAL
568
n
423
VAL
568
A
GLU
569
n
424
GLU
569
A
CYS
570
n
425
CYS
570
A
PHE
571
n
426
PHE
571
A
THR
572
n
427
THR
572
A
TRP
573
n
428
TRP
573
A
ASP
574
n
429
ASP
574
A
GLN
575
n
430
GLN
575
A
LYS
576
n
431
LYS
576
A
LEU
577
n
432
LEU
577
A
TRP
578
n
433
TRP
578
A
CYS
579
n
434
CYS
579
A
ARG
580
n
435
ARG
580
A
HIS
581
n
436
HIS
581
A
PHE
582
n
437
PHE
582
A
CYS
583
n
438
CYS
583
A
VAL
584
n
439
VAL
584
A
LEU
585
n
440
LEU
585
A
ALA
586
n
441
ALA
586
A
ASP
587
n
442
ASP
587
A
SER
588
n
443
SER
588
A
GLU
589
n
444
GLU
589
A
SER
590
n
445
SER
590
A
GLY
591
n
446
GLY
591
A
GLY
592
n
447
GLY
592
A
HIS
593
n
448
HIS
593
A
ILE
594
n
449
ILE
594
A
THR
595
n
450
THR
595
A
HIS
596
n
451
HIS
596
A
SER
597
n
452
SER
597
A
GLY
598
n
453
GLY
598
A
MET
599
n
454
MET
599
A
VAL
600
n
455
VAL
600
A
GLY
601
n
456
GLY
601
A
MET
602
n
457
MET
602
A
GLY
603
n
458
GLY
603
A
VAL
604
n
459
VAL
604
A
SER
605
n
460
SER
605
A
CYS
606
n
461
CYS
606
A
THR
607
n
462
THR
607
A
n
463
608
A
n
464
609
A
n
465
610
A
n
466
611
A
n
467
612
A
n
468
613
A
n
469
614
A
n
470
615
A
n
471
616
A
n
472
617
A
n
473
618
A
n
474
619
A
n
475
620
A
n
476
621
A
n
477
622
A
n
478
623
A
n
479
624
A
n
480
625
A
n
481
626
A
author_and_software_defined_assembly
PISA
2
dimeric
3380
A
ASN
200
GLYCOSYLATION SITE
A
ASN
55
ASN
A
ASN
215
GLYCOSYLATION SITE
A
ASN
70
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_555
-y,-x,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
49.6255000000
A
N
GLN
197
A
N
GLN
52
A
O
GLY
601
A
O
GLY
456
A
O
HIS
596
A
O
HIS
451
A
N
CYS
583
A
N
CYS
438
A
O
ALA
586
A
O
ALA
441
A
N
VAL
562
A
N
VAL
417
A
N
SER
217
A
N
SER
72
A
O
LEU
233
A
O
LEU
88
A
N
TYR
232
A
N
TYR
87
A
O
VAL
254
A
O
VAL
109
A
N
ARG
253
A
N
ARG
108
A
O
GLN
278
A
O
GLN
133
A
N
ILE
306
A
N
ILE
161
A
O
LEU
349
A
O
LEU
204
A
N
TYR
350
A
N
TYR
205
A
O
PRO
368
A
O
PRO
223
A
O
GLN
362
A
O
GLN
217
A
N
ALA
359
A
N
ALA
214
A
O
GLY
356
A
O
GLY
211
A
N
VAL
289
A
N
VAL
144
A
N
ALA
290
A
N
ALA
145
A
O
ALA
297
A
O
ALA
152
A
N
LEU
296
A
N
LEU
151
A
O
LEU
324
A
O
LEU
179
A
N
LEU
321
A
N
LEU
176
A
O
SER
335
A
O
SER
190
A
N
ILE
306
A
N
ILE
161
A
O
LEU
349
A
O
LEU
204
A
N
TYR
350
A
N
TYR
205
A
O
PRO
368
A
O
PRO
223
A
N
THR
369
A
N
THR
224
A
O
SER
409
A
O
SER
264
A
N
TYR
410
A
N
TYR
265
A
O
GLY
430
A
O
GLY
285
A
N
TYR
444
A
N
TYR
299
A
O
TRP
453
A
O
TRP
308
A
N
LEU
454
A
N
LEU
309
A
O
ASN
468
A
O
ASN
323
A
N
THR
469
A
N
THR
324
A
O
SER
479
A
O
SER
334
A
N
VAL
485
A
N
VAL
340
A
O
ALA
496
A
O
ALA
351
A
N
LEU
510
A
N
LEU
365
A
O
TYR
529
A
O
TYR
384
A
O
VAL
525
A
O
VAL
380
A
N
VAL
515
A
N
VAL
370
A
N
LEU
510
A
N
LEU
365
A
O
TYR
529
A
O
TYR
384
A
N
THR
528
A
N
THR
383
A
O
VAL
539
A
O
VAL
394
A
N
VAL
542
A
N
VAL
397
A
O
PHE
549
A
O
PHE
404
1
A
CG
ASP
156
A
CG
ASP
11
1
Y
1
A
OD1
ASP
156
A
OD1
ASP
11
1
Y
1
A
OD2
ASP
156
A
OD2
ASP
11
1
Y
1
A
CG1
VAL
157
A
CG1
VAL
12
1
Y
1
A
CG2
VAL
157
A
CG2
VAL
12
1
Y
1
A
CG
GLU
160
A
CG
GLU
15
1
Y
1
A
CD
GLU
160
A
CD
GLU
15
1
Y
1
A
OE1
GLU
160
A
OE1
GLU
15
1
Y
1
A
OE2
GLU
160
A
OE2
GLU
15
1
Y
1
A
CG
GLU
161
A
CG
GLU
16
1
Y
1
A
CD
GLU
161
A
CD
GLU
16
1
Y
1
A
OE1
GLU
161
A
OE1
GLU
16
1
Y
1
A
OE2
GLU
161
A
OE2
GLU
16
1
Y
1
A
CG
LEU
162
A
CG
LEU
17
1
Y
1
A
CD1
LEU
162
A
CD1
LEU
17
1
Y
1
A
CD2
LEU
162
A
CD2
LEU
17
1
Y
1
A
CG
ASN
164
A
CG
ASN
19
1
Y
1
A
OD1
ASN
164
A
OD1
ASN
19
1
Y
1
A
ND2
ASN
164
A
ND2
ASN
19
1
Y
1
A
CG
LEU
166
A
CG
LEU
21
1
Y
1
A
CD1
LEU
166
A
CD1
LEU
21
1
Y
1
A
CD2
LEU
166
A
CD2
LEU
21
1
Y
1
A
CG1
VAL
167
A
CG1
VAL
22
1
Y
1
A
CG2
VAL
167
A
CG2
VAL
22
1
Y
1
A
CG
ASN
168
A
CG
ASN
23
1
Y
1
A
OD1
ASN
168
A
OD1
ASN
23
1
Y
1
A
ND2
ASN
168
A
ND2
ASN
23
1
Y
1
A
CG
ASN
187
A
CG
ASN
42
1
Y
1
A
OD1
ASN
187
A
OD1
ASN
42
1
Y
1
A
ND2
ASN
187
A
ND2
ASN
42
1
Y
1
A
CG
GLN
248
A
CG
GLN
103
1
Y
1
A
CD
GLN
248
A
CD
GLN
103
1
Y
1
A
OE1
GLN
248
A
OE1
GLN
103
1
Y
1
A
NE2
GLN
248
A
NE2
GLN
103
1
Y
1
A
CG
ASP
505
A
CG
ASP
360
1
Y
1
A
OD1
ASP
505
A
OD1
ASP
360
1
Y
1
A
OD2
ASP
505
A
OD2
ASP
360
1
Y
1
A
CD
ARG
556
A
CD
ARG
411
1
Y
1
A
NE
ARG
556
A
NE
ARG
411
1
Y
1
A
CZ
ARG
556
A
CZ
ARG
411
1
Y
1
A
NH1
ARG
556
A
NH1
ARG
411
1
Y
1
A
NH2
ARG
556
A
NH2
ARG
411
1
Y
1
A
CG1
ILE
559
A
CG1
ILE
414
1
Y
1
A
CG2
ILE
559
A
CG2
ILE
414
1
Y
1
A
CD1
ILE
559
A
CD1
ILE
414
1
Y
1
A
CG
LYS
560
A
CG
LYS
415
1
Y
1
A
CD
LYS
560
A
CD
LYS
415
1
Y
1
A
CE
LYS
560
A
CE
LYS
415
1
Y
1
A
NZ
LYS
560
A
NZ
LYS
415
1
Y
1
A
GLU
146
A
GLU
1
1
Y
1
A
THR
147
A
THR
2
1
Y
1
A
GLY
148
A
GLY
3
1
Y
1
A
ASP
149
A
ASP
4
1
Y
1
A
TYR
150
A
TYR
5
1
Y
1
A
ASP
151
A
ASP
6
1
Y
1
A
GLN
152
A
GLN
7
1
Y
1
A
TYR
153
A
TYR
8
1
Y
1
A
SER
169
A
SER
24
1
Y
1
A
THR
170
A
THR
25
1
Y
1
A
LEU
171
A
LEU
26
1
Y
1
A
LEU
172
A
LEU
27
1
Y
1
A
GLU
173
A
GLU
28
1
Y
1
A
THR
174
A
THR
29
1
Y
1
A
ARG
175
A
ARG
30
1
Y
1
A
THR
176
A
THR
31
1
Y
1
A
THR
177
A
THR
32
1
Y
1
A
ASN
178
A
ASN
33
1
Y
1
A
GLN
179
A
GLN
34
1
Y
1
A
PHE
180
A
PHE
35
1
Y
1
A
LEU
181
A
LEU
36
1
Y
1
A
ALA
182
A
ALA
37
1
Y
1
A
VAL
183
A
VAL
38
1
Y
1
A
SER
184
A
SER
39
1
Y
1
A
LYS
185
A
LYS
40
1
Y
1
A
GLY
186
A
GLY
41
1
Y
1
A
LEU
239
A
LEU
94
1
Y
1
A
SER
240
A
SER
95
1
Y
1
A
SER
241
A
SER
96
1
Y
1
A
LYS
242
A
LYS
97
1
Y
1
A
ARG
243
A
ARG
98
1
Y
1
A
SER
244
A
SER
99
1
Y
1
A
GLU
245
A
GLU
100
1
Y
1
A
LEU
246
A
LEU
101
1
Y
1
A
SER
247
A
SER
102
1
Y
1
A
ALA
502
A
ALA
357
1
Y
1
A
GLU
503
A
GLU
358
1
Y
1
A
VAL
504
A
VAL
359
1
Y
1
A
VAL
608
A
VAL
463
1
Y
1
A
THR
609
A
THR
464
1
Y
1
A
ARG
610
A
ARG
465
1
Y
1
A
GLU
611
A
GLU
466
1
Y
1
A
ASP
612
A
ASP
467
1
Y
1
A
GLY
613
A
GLY
468
1
Y
1
A
THR
614
A
THR
469
1
Y
1
A
ASN
615
A
ASN
470
1
Y
1
A
ARG
616
A
ARG
471
1
Y
1
A
ARG
617
A
ARG
472
1
Y
1
A
GLY
618
A
GLY
473
1
Y
1
A
THR
619
A
THR
474
1
Y
1
A
LYS
620
A
LYS
475
1
Y
1
A
HIS
621
A
HIS
476
1
Y
1
A
HIS
622
A
HIS
477
1
Y
1
A
HIS
623
A
HIS
478
1
Y
1
A
HIS
624
A
HIS
479
1
Y
1
A
HIS
625
A
HIS
480
1
Y
1
A
HIS
626
A
HIS
481
1
Y
1
A
CYS
188
-94.47
-113.88
1
A
SER
189
-159.79
-46.20
1
A
SER
199
-173.17
146.19
1
A
LEU
210
-50.75
-71.03
1
A
SER
224
-178.40
137.96
1
A
GLN
225
33.87
58.97
1
A
LEU
249
-133.50
-99.15
1
A
SER
250
167.96
133.94
1
A
PRO
263
-66.23
9.93
1
A
SER
281
-77.66
-72.42
1
A
ASN
282
-172.55
-29.92
1
A
ASP
283
-103.87
50.00
1
A
LEU
284
-145.35
28.88
1
A
GLN
311
69.95
-71.21
1
A
SER
313
-65.70
56.86
1
A
ASP
347
-72.94
-75.63
1
A
SER
352
-142.71
-104.35
1
A
ILE
390
-69.47
6.12
1
A
ALA
400
-28.34
-69.47
1
A
SER
418
-179.01
123.10
1
A
LEU
419
-48.57
-9.19
1
A
THR
420
-39.73
-86.25
1
A
VAL
421
-68.15
54.07
1
A
GLU
422
37.77
80.56
1
A
LEU
423
-29.74
107.20
1
A
ASN
449
-22.52
-78.66
1
A
ASN
450
-106.35
44.49
1
A
LYS
460
-39.29
132.59
1
A
ASN
461
61.97
-4.89
1
A
TYR
481
-140.15
-58.38
1
A
ALA
490
-125.34
-161.90
1
A
ASP
493
-110.58
54.10
1
A
LEU
500
-117.49
79.40
1
A
ASP
507
-138.51
-122.03
1
A
GLU
535
-162.33
-22.36
1
A
HIS
536
57.68
102.26
1
A
PHE
555
-44.63
-133.81
1
A
SER
588
-65.07
73.90
1
A
GLU
589
-140.11
-3.96
0.2711
0.2270
3.0
30
1283
18688
99.7
RANDOM
1
Isotropic
THROUGHOUT
SAD
Engh & Huber
0.48
0.38
6.0
0.70
0.54
3.0
30
0
3269
28
0
3241
1.4622
0.0077
0.4033
0.3430
3.11
124
1671
7.0
3.0
30
2ZB5
18727
18688
0.0
0.064
1
9.4
99.6
0.388
3.0
3.11
5.11
1795
1
6.4
98.1
data collection
HKL-2000
phasing
SOLVE
refinement
CNS
data reduction
HKL-2000
data scaling
HKL-2000
Crystal structure of the measles virus hemagglutinin (complex-sugar-type)
1
N
N
2
N
N
2
N
N
A
ALA
159
A
ALA
14
HELX_P
A
VAL
167
A
VAL
22
1
1
9
A
SER
204
A
SER
59
HELX_P
A
ARG
212
A
ARG
67
1
2
9
A
ASP
373
A
ASP
228
HELX_P
A
LYS
387
A
LYS
242
1
3
15
A
ILE
390
A
ILE
245
HELX_P
A
ASN
396
A
ASN
251
1
4
7
A
PRO
401
A
PRO
256
HELX_P
A
ASN
405
A
ASN
260
5
5
5
disulf
2.032
A
CYS
188
A
SG
CYS
43
1_555
A
CYS
606
A
SG
CYS
461
1_555
disulf
2.031
A
CYS
287
A
SG
CYS
142
1_555
A
CYS
300
A
SG
CYS
155
1_555
disulf
2.006
A
CYS
381
A
SG
CYS
236
1_555
A
CYS
494
A
SG
CYS
349
1_555
disulf
2.028
A
CYS
386
A
SG
CYS
241
1_555
A
CYS
394
A
SG
CYS
249
1_555
disulf
2.041
A
CYS
570
A
SG
CYS
425
1_555
A
CYS
579
A
SG
CYS
434
1_555
covale
1.452
one
N-Glycosylation
A
NAG
1
B
C1
NAG
1_555
A
ASN
200
A
ND2
ASN
55
1_555
covale
1.452
one
N-Glycosylation
A
NAG
11
C
C1
NAG
1_555
A
ASN
215
A
ND2
ASN
70
1_555
VIRAL PROTEIN
beta propeller, Envelope protein, Hemagglutinin, Membrane, Transmembrane, Virion, VIRAL PROTEIN
A
ILE
473
A
ILE
328
1
A
PRO
474
A
PRO
329
0.10
Q83625_9PARA
UNP
1
149
Q83625
DYDQYCADVAAEELMNALVNSTLLETRTTNQFLAVSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMY
GGTYLVEKPNLSSKRSELSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITI
PYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKG
KIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVIN
TLEWIPRFKVSPYLFNVPIKEAGEDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRS
FSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCTVTREDGTNRR
149
617
2ZB5
149
617
Q83625
A
1
4
472
1
expression tag
GLU
146
2ZB5
A
Q83625
UNP
1
1
expression tag
THR
147
2ZB5
A
Q83625
UNP
2
1
expression tag
GLY
148
2ZB5
A
Q83625
UNP
3
1
ASN
engineered mutation
THR
484
2ZB5
A
Q83625
UNP
484
339
1
GLU
engineered mutation
GLY
492
2ZB5
A
Q83625
UNP
492
347
1
expression tag
GLY
618
2ZB5
A
Q83625
UNP
473
1
expression tag
THR
619
2ZB5
A
Q83625
UNP
474
1
expression tag
LYS
620
2ZB5
A
Q83625
UNP
475
1
expression tag
HIS
621
2ZB5
A
Q83625
UNP
476
1
expression tag
HIS
622
2ZB5
A
Q83625
UNP
477
1
expression tag
HIS
623
2ZB5
A
Q83625
UNP
478
1
expression tag
HIS
624
2ZB5
A
Q83625
UNP
479
1
expression tag
HIS
625
2ZB5
A
Q83625
UNP
480
1
expression tag
HIS
626
2ZB5
A
Q83625
UNP
481
4
4
8
5
4
2
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
192
A
THR
47
A
PHE
198
A
PHE
53
A
HIS
593
A
HIS
448
A
CYS
606
A
CYS
461
A
LYS
576
A
LYS
431
A
ALA
586
A
ALA
441
A
VAL
562
A
VAL
417
A
TRP
573
A
TRP
428
A
ASN
215
A
ASN
70
A
SER
224
A
SER
79
A
MET
227
A
MET
82
A
GLU
235
A
GLU
90
A
MET
251
A
MET
106
A
ARG
261
A
ARG
116
A
VAL
269
A
VAL
124
A
PRO
279
A
PRO
134
A
SER
305
A
SER
160
A
THR
307
A
THR
162
A
ILE
346
A
ILE
201
A
TYR
350
A
TYR
205
A
GLN
362
A
GLN
217
A
ARG
371
A
ARG
226
A
ARG
355
A
ARG
210
A
ALA
359
A
ALA
214
A
ASN
286
A
ASN
141
A
GLY
292
A
GLY
147
A
LYS
295
A
LYS
150
A
HIS
301
A
HIS
156
A
SER
318
A
SER
173
A
GLY
325
A
GLY
180
A
MET
333
A
MET
188
A
PRO
338
A
PRO
193
A
SER
305
A
SER
160
A
THR
307
A
THR
162
A
ILE
346
A
ILE
201
A
TYR
350
A
TYR
205
A
GLN
362
A
GLN
217
A
ARG
371
A
ARG
226
A
SER
409
A
SER
264
A
ASP
416
A
ASP
271
A
LYS
426
A
LYS
281
A
GLY
430
A
GLY
285
A
ASP
442
A
ASP
297
A
LYS
445
A
LYS
300
A
VAL
451
A
VAL
306
A
ILE
456
A
ILE
311
A
VAL
466
A
VAL
321
A
GLU
471
A
GLU
326
A
LYS
477
A
LYS
332
A
LEU
482
A
LEU
337
A
THR
484
A
THR
339
A
PRO
486
A
PRO
341
A
HIS
495
A
HIS
350
A
PRO
497
A
PRO
352
A
LYS
509
A
LYS
364
A
SER
511
A
SER
366
A
TYR
524
A
TYR
379
A
ASP
530
A
ASP
385
A
VAL
515
A
VAL
370
A
ILE
516
A
ILE
371
A
LYS
509
A
LYS
364
A
SER
511
A
SER
366
A
TYR
524
A
TYR
379
A
ASP
530
A
ASP
385
A
VAL
538
A
VAL
393
A
TYR
543
A
TYR
398
A
SER
548
A
SER
403
A
TYR
553
A
TYR
408
92
P 41 21 2