0.008553
0.004938
0.000000
0.000000
0.009876
0.000000
0.000000
0.000000
0.019476
0.00000
0.00000
0.00000
Cramer, W.A.
Zakharov, S.D.
Yamashita, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
116.923
116.923
51.346
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C16 H34 O5
306.438
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
C
N
76
N
C
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
O
N
89
N
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
N
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
O
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
N
N
179
S
C
N
180
N
C
N
181
N
O
N
182
N
C
Y
183
N
C
Y
184
N
N
Y
185
N
C
Y
186
N
C
Y
187
N
N
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
S
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
N
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
N
276
N
C
N
277
N
S
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
MG
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
R
C
N
351
N
O
N
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
N
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
Y
181
N
sing
Y
182
N
doub
Y
183
N
doub
N
184
N
sing
Y
185
N
sing
N
186
N
sing
Y
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
doub
Y
290
N
sing
Y
291
N
sing
N
292
N
sing
Y
293
N
doub
N
294
N
sing
Y
295
N
doub
N
296
N
sing
Y
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
Y
386
N
doub
Y
387
N
sing
Y
388
N
sing
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
doub
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
27
2171
2180
10.1038/emboj.2008.137
18636093
Crystal structures of the OmpF porin: function in a colicin translocon.
2008
10.2210/pdb2zfg/pdb
pdb_00002zfg
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2006-11-18
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.97856
1.0
19-ID
APS
0.97856
SYNCHROTRON
APS BEAMLINE 19-ID
37114.250
Outer membrane protein F
1
man
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
306.438
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2
syn
non-polymer
18.015
water
322
nat
water
Porin ompF, Outer membrane protein 1A, Outer membrane protein IA, Outer membrane protein B
no
no
AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGK
NERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPI
TNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS
DNKLGVGSDDTVAVGIVYQF
AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGK
NERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPI
TNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS
DNKLGVGSDDTVAVGIVYQF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
ompF, cmlB, coa, cry, tolF
562
Escherichia coli
562
Escherichia coli
2.73
54.94
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2008-07-29
1
1
2011-07-13
1
2
2023-11-01
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2008-01-04
REL
REL
MG
MAGNESIUM ION
C8E
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
HOH
water
2OMF
PDB
experimental model
MG
1
2
MG
MG
341
A
C8E
1
3
C8E
C8E
342
A
C8E
2
3
C8E
C8E
343
A
HOH
1
4
HOH
HOH
344
A
HOH
2
4
HOH
HOH
345
A
HOH
3
4
HOH
HOH
346
A
HOH
4
4
HOH
HOH
347
A
HOH
5
4
HOH
HOH
348
A
HOH
6
4
HOH
HOH
349
A
HOH
7
4
HOH
HOH
350
A
HOH
8
4
HOH
HOH
351
A
HOH
9
4
HOH
HOH
352
A
HOH
10
4
HOH
HOH
353
A
HOH
11
4
HOH
HOH
354
A
HOH
12
4
HOH
HOH
355
A
HOH
13
4
HOH
HOH
356
A
HOH
14
4
HOH
HOH
357
A
HOH
15
4
HOH
HOH
358
A
HOH
16
4
HOH
HOH
359
A
HOH
17
4
HOH
HOH
360
A
HOH
18
4
HOH
HOH
361
A
HOH
19
4
HOH
HOH
362
A
HOH
20
4
HOH
HOH
363
A
HOH
21
4
HOH
HOH
364
A
HOH
22
4
HOH
HOH
365
A
HOH
23
4
HOH
HOH
366
A
HOH
24
4
HOH
HOH
367
A
HOH
25
4
HOH
HOH
368
A
HOH
26
4
HOH
HOH
369
A
HOH
27
4
HOH
HOH
370
A
HOH
28
4
HOH
HOH
371
A
HOH
29
4
HOH
HOH
372
A
HOH
30
4
HOH
HOH
373
A
HOH
31
4
HOH
HOH
374
A
HOH
32
4
HOH
HOH
375
A
HOH
33
4
HOH
HOH
376
A
HOH
34
4
HOH
HOH
377
A
HOH
35
4
HOH
HOH
378
A
HOH
36
4
HOH
HOH
379
A
HOH
37
4
HOH
HOH
380
A
HOH
38
4
HOH
HOH
381
A
HOH
39
4
HOH
HOH
382
A
HOH
41
4
HOH
HOH
383
A
HOH
42
4
HOH
HOH
384
A
HOH
43
4
HOH
HOH
385
A
HOH
44
4
HOH
HOH
386
A
HOH
45
4
HOH
HOH
387
A
HOH
46
4
HOH
HOH
388
A
HOH
47
4
HOH
HOH
389
A
HOH
48
4
HOH
HOH
390
A
HOH
49
4
HOH
HOH
391
A
HOH
50
4
HOH
HOH
392
A
HOH
51
4
HOH
HOH
393
A
HOH
52
4
HOH
HOH
394
A
HOH
54
4
HOH
HOH
395
A
HOH
55
4
HOH
HOH
396
A
HOH
56
4
HOH
HOH
397
A
HOH
57
4
HOH
HOH
398
A
HOH
58
4
HOH
HOH
399
A
HOH
59
4
HOH
HOH
400
A
HOH
60
4
HOH
HOH
401
A
HOH
61
4
HOH
HOH
402
A
HOH
62
4
HOH
HOH
403
A
HOH
63
4
HOH
HOH
404
A
HOH
64
4
HOH
HOH
405
A
HOH
65
4
HOH
HOH
406
A
HOH
66
4
HOH
HOH
407
A
HOH
67
4
HOH
HOH
408
A
HOH
68
4
HOH
HOH
409
A
HOH
69
4
HOH
HOH
410
A
HOH
70
4
HOH
HOH
411
A
HOH
72
4
HOH
HOH
412
A
HOH
73
4
HOH
HOH
413
A
HOH
74
4
HOH
HOH
414
A
HOH
75
4
HOH
HOH
415
A
HOH
76
4
HOH
HOH
416
A
HOH
77
4
HOH
HOH
417
A
HOH
78
4
HOH
HOH
418
A
HOH
79
4
HOH
HOH
419
A
HOH
80
4
HOH
HOH
420
A
HOH
81
4
HOH
HOH
421
A
HOH
82
4
HOH
HOH
422
A
HOH
83
4
HOH
HOH
423
A
HOH
84
4
HOH
HOH
424
A
HOH
85
4
HOH
HOH
425
A
HOH
86
4
HOH
HOH
426
A
HOH
88
4
HOH
HOH
427
A
HOH
89
4
HOH
HOH
428
A
HOH
90
4
HOH
HOH
429
A
HOH
91
4
HOH
HOH
430
A
HOH
92
4
HOH
HOH
431
A
HOH
93
4
HOH
HOH
432
A
HOH
94
4
HOH
HOH
433
A
HOH
95
4
HOH
HOH
434
A
HOH
96
4
HOH
HOH
435
A
HOH
97
4
HOH
HOH
436
A
HOH
99
4
HOH
HOH
437
A
HOH
100
4
HOH
HOH
438
A
HOH
101
4
HOH
HOH
439
A
HOH
102
4
HOH
HOH
440
A
HOH
103
4
HOH
HOH
441
A
HOH
105
4
HOH
HOH
442
A
HOH
106
4
HOH
HOH
443
A
HOH
107
4
HOH
HOH
444
A
HOH
108
4
HOH
HOH
445
A
HOH
109
4
HOH
HOH
446
A
HOH
110
4
HOH
HOH
447
A
HOH
111
4
HOH
HOH
448
A
HOH
112
4
HOH
HOH
449
A
HOH
113
4
HOH
HOH
450
A
HOH
114
4
HOH
HOH
451
A
HOH
115
4
HOH
HOH
452
A
HOH
116
4
HOH
HOH
453
A
HOH
117
4
HOH
HOH
454
A
HOH
118
4
HOH
HOH
455
A
HOH
119
4
HOH
HOH
456
A
HOH
120
4
HOH
HOH
457
A
HOH
121
4
HOH
HOH
458
A
HOH
122
4
HOH
HOH
459
A
HOH
123
4
HOH
HOH
460
A
HOH
126
4
HOH
HOH
461
A
HOH
127
4
HOH
HOH
462
A
HOH
128
4
HOH
HOH
463
A
HOH
129
4
HOH
HOH
464
A
HOH
130
4
HOH
HOH
465
A
HOH
131
4
HOH
HOH
466
A
HOH
132
4
HOH
HOH
467
A
HOH
134
4
HOH
HOH
468
A
HOH
135
4
HOH
HOH
469
A
HOH
136
4
HOH
HOH
470
A
HOH
137
4
HOH
HOH
471
A
HOH
138
4
HOH
HOH
472
A
HOH
139
4
HOH
HOH
473
A
HOH
140
4
HOH
HOH
474
A
HOH
141
4
HOH
HOH
475
A
HOH
142
4
HOH
HOH
476
A
HOH
143
4
HOH
HOH
477
A
HOH
144
4
HOH
HOH
478
A
HOH
145
4
HOH
HOH
479
A
HOH
146
4
HOH
HOH
480
A
HOH
147
4
HOH
HOH
481
A
HOH
148
4
HOH
HOH
482
A
HOH
150
4
HOH
HOH
483
A
HOH
152
4
HOH
HOH
484
A
HOH
153
4
HOH
HOH
485
A
HOH
154
4
HOH
HOH
486
A
HOH
155
4
HOH
HOH
487
A
HOH
156
4
HOH
HOH
488
A
HOH
157
4
HOH
HOH
489
A
HOH
158
4
HOH
HOH
490
A
HOH
159
4
HOH
HOH
491
A
HOH
160
4
HOH
HOH
492
A
HOH
162
4
HOH
HOH
493
A
HOH
163
4
HOH
HOH
494
A
HOH
165
4
HOH
HOH
495
A
HOH
166
4
HOH
HOH
496
A
HOH
167
4
HOH
HOH
497
A
HOH
169
4
HOH
HOH
498
A
HOH
170
4
HOH
HOH
499
A
HOH
171
4
HOH
HOH
500
A
HOH
172
4
HOH
HOH
501
A
HOH
173
4
HOH
HOH
502
A
HOH
174
4
HOH
HOH
503
A
HOH
175
4
HOH
HOH
504
A
HOH
176
4
HOH
HOH
505
A
HOH
177
4
HOH
HOH
506
A
HOH
178
4
HOH
HOH
507
A
HOH
179
4
HOH
HOH
508
A
HOH
180
4
HOH
HOH
509
A
HOH
181
4
HOH
HOH
510
A
HOH
182
4
HOH
HOH
511
A
HOH
183
4
HOH
HOH
512
A
HOH
184
4
HOH
HOH
513
A
HOH
185
4
HOH
HOH
514
A
HOH
186
4
HOH
HOH
515
A
HOH
187
4
HOH
HOH
516
A
HOH
188
4
HOH
HOH
517
A
HOH
189
4
HOH
HOH
518
A
HOH
190
4
HOH
HOH
519
A
HOH
191
4
HOH
HOH
520
A
HOH
192
4
HOH
HOH
521
A
HOH
194
4
HOH
HOH
522
A
HOH
195
4
HOH
HOH
523
A
HOH
196
4
HOH
HOH
524
A
HOH
198
4
HOH
HOH
525
A
HOH
199
4
HOH
HOH
526
A
HOH
200
4
HOH
HOH
527
A
HOH
201
4
HOH
HOH
528
A
HOH
203
4
HOH
HOH
529
A
HOH
204
4
HOH
HOH
530
A
HOH
205
4
HOH
HOH
531
A
HOH
209
4
HOH
HOH
532
A
HOH
210
4
HOH
HOH
533
A
HOH
211
4
HOH
HOH
534
A
HOH
212
4
HOH
HOH
535
A
HOH
213
4
HOH
HOH
536
A
HOH
214
4
HOH
HOH
537
A
HOH
215
4
HOH
HOH
538
A
HOH
216
4
HOH
HOH
539
A
HOH
217
4
HOH
HOH
540
A
HOH
218
4
HOH
HOH
541
A
HOH
219
4
HOH
HOH
542
A
HOH
220
4
HOH
HOH
543
A
HOH
221
4
HOH
HOH
544
A
HOH
222
4
HOH
HOH
545
A
HOH
223
4
HOH
HOH
546
A
HOH
224
4
HOH
HOH
547
A
HOH
226
4
HOH
HOH
548
A
HOH
227
4
HOH
HOH
549
A
HOH
228
4
HOH
HOH
550
A
HOH
229
4
HOH
HOH
551
A
HOH
230
4
HOH
HOH
552
A
HOH
231
4
HOH
HOH
553
A
HOH
232
4
HOH
HOH
554
A
HOH
233
4
HOH
HOH
555
A
HOH
234
4
HOH
HOH
556
A
HOH
235
4
HOH
HOH
557
A
HOH
236
4
HOH
HOH
558
A
HOH
237
4
HOH
HOH
559
A
HOH
238
4
HOH
HOH
560
A
HOH
239
4
HOH
HOH
561
A
HOH
243
4
HOH
HOH
562
A
HOH
246
4
HOH
HOH
563
A
HOH
247
4
HOH
HOH
564
A
HOH
250
4
HOH
HOH
565
A
HOH
251
4
HOH
HOH
566
A
HOH
252
4
HOH
HOH
567
A
HOH
253
4
HOH
HOH
568
A
HOH
254
4
HOH
HOH
569
A
HOH
255
4
HOH
HOH
570
A
HOH
256
4
HOH
HOH
571
A
HOH
257
4
HOH
HOH
572
A
HOH
258
4
HOH
HOH
573
A
HOH
259
4
HOH
HOH
574
A
HOH
260
4
HOH
HOH
575
A
HOH
261
4
HOH
HOH
576
A
HOH
262
4
HOH
HOH
577
A
HOH
263
4
HOH
HOH
578
A
HOH
264
4
HOH
HOH
579
A
HOH
265
4
HOH
HOH
580
A
HOH
266
4
HOH
HOH
581
A
HOH
267
4
HOH
HOH
582
A
HOH
268
4
HOH
HOH
583
A
HOH
269
4
HOH
HOH
584
A
HOH
270
4
HOH
HOH
585
A
HOH
271
4
HOH
HOH
586
A
HOH
272
4
HOH
HOH
587
A
HOH
275
4
HOH
HOH
588
A
HOH
276
4
HOH
HOH
589
A
HOH
277
4
HOH
HOH
590
A
HOH
278
4
HOH
HOH
591
A
HOH
279
4
HOH
HOH
592
A
HOH
280
4
HOH
HOH
593
A
HOH
281
4
HOH
HOH
594
A
HOH
282
4
HOH
HOH
595
A
HOH
283
4
HOH
HOH
596
A
HOH
287
4
HOH
HOH
597
A
HOH
288
4
HOH
HOH
598
A
HOH
289
4
HOH
HOH
599
A
HOH
291
4
HOH
HOH
600
A
HOH
292
4
HOH
HOH
601
A
HOH
293
4
HOH
HOH
602
A
HOH
294
4
HOH
HOH
603
A
HOH
295
4
HOH
HOH
604
A
HOH
296
4
HOH
HOH
605
A
HOH
298
4
HOH
HOH
606
A
HOH
299
4
HOH
HOH
607
A
HOH
300
4
HOH
HOH
608
A
HOH
301
4
HOH
HOH
609
A
HOH
302
4
HOH
HOH
610
A
HOH
303
4
HOH
HOH
611
A
HOH
304
4
HOH
HOH
612
A
HOH
305
4
HOH
HOH
613
A
HOH
306
4
HOH
HOH
614
A
HOH
307
4
HOH
HOH
615
A
HOH
308
4
HOH
HOH
616
A
HOH
309
4
HOH
HOH
617
A
HOH
310
4
HOH
HOH
618
A
HOH
311
4
HOH
HOH
619
A
HOH
312
4
HOH
HOH
620
A
HOH
313
4
HOH
HOH
621
A
HOH
316
4
HOH
HOH
622
A
HOH
317
4
HOH
HOH
623
A
HOH
318
4
HOH
HOH
624
A
HOH
319
4
HOH
HOH
625
A
HOH
320
4
HOH
HOH
626
A
HOH
321
4
HOH
HOH
627
A
HOH
322
4
HOH
HOH
628
A
HOH
323
4
HOH
HOH
629
A
HOH
324
4
HOH
HOH
630
A
HOH
325
4
HOH
HOH
631
A
HOH
327
4
HOH
HOH
632
A
HOH
330
4
HOH
HOH
633
A
HOH
331
4
HOH
HOH
634
A
HOH
332
4
HOH
HOH
635
A
HOH
333
4
HOH
HOH
636
A
HOH
334
4
HOH
HOH
637
A
HOH
337
4
HOH
HOH
638
A
HOH
338
4
HOH
HOH
639
A
HOH
339
4
HOH
HOH
640
A
HOH
340
4
HOH
HOH
641
A
HOH
341
4
HOH
HOH
642
A
HOH
350
4
HOH
HOH
643
A
HOH
352
4
HOH
HOH
644
A
HOH
353
4
HOH
HOH
645
A
HOH
354
4
HOH
HOH
646
A
HOH
5
4
HOH
HOH
647
A
HOH
7
4
HOH
HOH
648
A
HOH
8
4
HOH
HOH
649
A
HOH
9
4
HOH
HOH
650
A
HOH
10
4
HOH
HOH
651
A
HOH
11
4
HOH
HOH
652
A
HOH
12
4
HOH
HOH
653
A
HOH
5
4
HOH
HOH
654
A
HOH
7
4
HOH
HOH
655
A
HOH
9
4
HOH
HOH
656
A
HOH
11
4
HOH
HOH
657
A
HOH
13
4
HOH
HOH
658
A
HOH
14
4
HOH
HOH
659
A
HOH
2
4
HOH
HOH
660
A
HOH
3
4
HOH
HOH
661
A
HOH
4
4
HOH
HOH
662
A
HOH
5
4
HOH
HOH
663
A
HOH
6
4
HOH
HOH
664
A
HOH
7
4
HOH
HOH
665
A
ALA
1
n
1
ALA
1
A
GLU
2
n
2
GLU
2
A
ILE
3
n
3
ILE
3
A
TYR
4
n
4
TYR
4
A
ASN
5
n
5
ASN
5
A
LYS
6
n
6
LYS
6
A
ASP
7
n
7
ASP
7
A
GLY
8
n
8
GLY
8
A
ASN
9
n
9
ASN
9
A
LYS
10
n
10
LYS
10
A
VAL
11
n
11
VAL
11
A
ASP
12
n
12
ASP
12
A
LEU
13
n
13
LEU
13
A
TYR
14
n
14
TYR
14
A
GLY
15
n
15
GLY
15
A
LYS
16
n
16
LYS
16
A
ALA
17
n
17
ALA
17
A
VAL
18
n
18
VAL
18
A
GLY
19
n
19
GLY
19
A
LEU
20
n
20
LEU
20
A
HIS
21
n
21
HIS
21
A
TYR
22
n
22
TYR
22
A
PHE
23
n
23
PHE
23
A
SER
24
n
24
SER
24
A
LYS
25
n
25
LYS
25
A
GLY
26
n
26
GLY
26
A
n
27
27
A
GLY
28
n
28
GLY
28
A
GLU
29
n
29
GLU
29
A
ASN
30
n
30
ASN
30
A
SER
31
n
31
SER
31
A
TYR
32
n
32
TYR
32
A
GLY
33
n
33
GLY
33
A
GLY
34
n
34
GLY
34
A
ASN
35
n
35
ASN
35
A
GLY
36
n
36
GLY
36
A
ASP
37
n
37
ASP
37
A
MET
38
n
38
MET
38
A
THR
39
n
39
THR
39
A
TYR
40
n
40
TYR
40
A
ALA
41
n
41
ALA
41
A
ARG
42
n
42
ARG
42
A
LEU
43
n
43
LEU
43
A
GLY
44
n
44
GLY
44
A
PHE
45
n
45
PHE
45
A
LYS
46
n
46
LYS
46
A
GLY
47
n
47
GLY
47
A
GLU
48
n
48
GLU
48
A
THR
49
n
49
THR
49
A
GLN
50
n
50
GLN
50
A
ILE
51
n
51
ILE
51
A
ASN
52
n
52
ASN
52
A
SER
53
n
53
SER
53
A
ASP
54
n
54
ASP
54
A
LEU
55
n
55
LEU
55
A
THR
56
n
56
THR
56
A
GLY
57
n
57
GLY
57
A
TYR
58
n
58
TYR
58
A
GLY
59
n
59
GLY
59
A
GLN
60
n
60
GLN
60
A
TRP
61
n
61
TRP
61
A
GLU
62
n
62
GLU
62
A
TYR
63
n
63
TYR
63
A
ASN
64
n
64
ASN
64
A
PHE
65
n
65
PHE
65
A
GLN
66
n
66
GLN
66
A
GLY
67
n
67
GLY
67
A
ASN
68
n
68
ASN
68
A
ASN
69
n
69
ASN
69
A
SER
70
n
70
SER
70
A
GLU
71
n
71
GLU
71
A
GLY
72
n
72
GLY
72
A
ALA
73
n
73
ALA
73
A
ASP
74
n
74
ASP
74
A
ALA
75
n
75
ALA
75
A
GLN
76
n
76
GLN
76
A
THR
77
n
77
THR
77
A
GLY
78
n
78
GLY
78
A
ASN
79
n
79
ASN
79
A
LYS
80
n
80
LYS
80
A
THR
81
n
81
THR
81
A
ARG
82
n
82
ARG
82
A
LEU
83
n
83
LEU
83
A
ALA
84
n
84
ALA
84
A
PHE
85
n
85
PHE
85
A
ALA
86
n
86
ALA
86
A
GLY
87
n
87
GLY
87
A
LEU
88
n
88
LEU
88
A
LYS
89
n
89
LYS
89
A
TYR
90
n
90
TYR
90
A
ALA
91
n
91
ALA
91
A
ASP
92
n
92
ASP
92
A
VAL
93
n
93
VAL
93
A
GLY
94
n
94
GLY
94
A
SER
95
n
95
SER
95
A
PHE
96
n
96
PHE
96
A
ASP
97
n
97
ASP
97
A
TYR
98
n
98
TYR
98
A
GLY
99
n
99
GLY
99
A
ARG
100
n
100
ARG
100
A
ASN
101
n
101
ASN
101
A
TYR
102
n
102
TYR
102
A
GLY
103
n
103
GLY
103
A
VAL
104
n
104
VAL
104
A
VAL
105
n
105
VAL
105
A
TYR
106
n
106
TYR
106
A
ASP
107
n
107
ASP
107
A
ALA
108
n
108
ALA
108
A
LEU
109
n
109
LEU
109
A
GLY
110
n
110
GLY
110
A
TYR
111
n
111
TYR
111
A
THR
112
n
112
THR
112
A
ASP
113
n
113
ASP
113
A
MET
114
n
114
MET
114
A
LEU
115
n
115
LEU
115
A
PRO
116
n
116
PRO
116
A
GLU
117
n
117
GLU
117
A
PHE
118
n
118
PHE
118
A
GLY
119
n
119
GLY
119
A
GLY
120
n
120
GLY
120
A
ASP
121
n
121
ASP
121
A
THR
122
n
122
THR
122
A
ALA
123
n
123
ALA
123
A
TYR
124
n
124
TYR
124
A
SER
125
n
125
SER
125
A
ASP
126
n
126
ASP
126
A
ASP
127
n
127
ASP
127
A
PHE
128
n
128
PHE
128
A
PHE
129
n
129
PHE
129
A
VAL
130
n
130
VAL
130
A
GLY
131
n
131
GLY
131
A
ARG
132
n
132
ARG
132
A
VAL
133
n
133
VAL
133
A
GLY
134
n
134
GLY
134
A
GLY
135
n
135
GLY
135
A
VAL
136
n
136
VAL
136
A
ALA
137
n
137
ALA
137
A
THR
138
n
138
THR
138
A
TYR
139
n
139
TYR
139
A
ARG
140
n
140
ARG
140
A
ASN
141
n
141
ASN
141
A
SER
142
n
142
SER
142
A
ASN
143
n
143
ASN
143
A
PHE
144
n
144
PHE
144
A
PHE
145
n
145
PHE
145
A
GLY
146
n
146
GLY
146
A
LEU
147
n
147
LEU
147
A
VAL
148
n
148
VAL
148
A
ASP
149
n
149
ASP
149
A
GLY
150
n
150
GLY
150
A
LEU
151
n
151
LEU
151
A
ASN
152
n
152
ASN
152
A
PHE
153
n
153
PHE
153
A
ALA
154
n
154
ALA
154
A
VAL
155
n
155
VAL
155
A
GLN
156
n
156
GLN
156
A
TYR
157
n
157
TYR
157
A
LEU
158
n
158
LEU
158
A
GLY
159
n
159
GLY
159
A
LYS
160
n
160
LYS
160
A
ASN
161
n
161
ASN
161
A
GLU
162
n
162
GLU
162
A
ARG
163
n
163
ARG
163
A
ASP
164
n
164
ASP
164
A
THR
165
n
165
THR
165
A
ALA
166
n
166
ALA
166
A
ARG
167
n
167
ARG
167
A
ARG
168
n
168
ARG
168
A
SER
169
n
169
SER
169
A
ASN
170
n
170
ASN
170
A
GLY
171
n
171
GLY
171
A
ASP
172
n
172
ASP
172
A
GLY
173
n
173
GLY
173
A
VAL
174
n
174
VAL
174
A
GLY
175
n
175
GLY
175
A
GLY
176
n
176
GLY
176
A
SER
177
n
177
SER
177
A
ILE
178
n
178
ILE
178
A
SER
179
n
179
SER
179
A
TYR
180
n
180
TYR
180
A
GLU
181
n
181
GLU
181
A
TYR
182
n
182
TYR
182
A
GLU
183
n
183
GLU
183
A
GLY
184
n
184
GLY
184
A
PHE
185
n
185
PHE
185
A
GLY
186
n
186
GLY
186
A
ILE
187
n
187
ILE
187
A
VAL
188
n
188
VAL
188
A
GLY
189
n
189
GLY
189
A
ALA
190
n
190
ALA
190
A
TYR
191
n
191
TYR
191
A
GLY
192
n
192
GLY
192
A
ALA
193
n
193
ALA
193
A
ALA
194
n
194
ALA
194
A
ASP
195
n
195
ASP
195
A
ARG
196
n
196
ARG
196
A
THR
197
n
197
THR
197
A
ASN
198
n
198
ASN
198
A
LEU
199
n
199
LEU
199
A
GLN
200
n
200
GLN
200
A
GLU
201
n
201
GLU
201
A
ALA
202
n
202
ALA
202
A
GLN
203
n
203
GLN
203
A
PRO
204
n
204
PRO
204
A
LEU
205
n
205
LEU
205
A
GLY
206
n
206
GLY
206
A
ASN
207
n
207
ASN
207
A
GLY
208
n
208
GLY
208
A
LYS
209
n
209
LYS
209
A
LYS
210
n
210
LYS
210
A
ALA
211
n
211
ALA
211
A
GLU
212
n
212
GLU
212
A
GLN
213
n
213
GLN
213
A
TRP
214
n
214
TRP
214
A
ALA
215
n
215
ALA
215
A
THR
216
n
216
THR
216
A
GLY
217
n
217
GLY
217
A
LEU
218
n
218
LEU
218
A
LYS
219
n
219
LYS
219
A
TYR
220
n
220
TYR
220
A
ASP
221
n
221
ASP
221
A
ALA
222
n
222
ALA
222
A
ASN
223
n
223
ASN
223
A
ASN
224
n
224
ASN
224
A
ILE
225
n
225
ILE
225
A
TYR
226
n
226
TYR
226
A
LEU
227
n
227
LEU
227
A
ALA
228
n
228
ALA
228
A
ALA
229
n
229
ALA
229
A
ASN
230
n
230
ASN
230
A
TYR
231
n
231
TYR
231
A
GLY
232
n
232
GLY
232
A
GLU
233
n
233
GLU
233
A
THR
234
n
234
THR
234
A
ARG
235
n
235
ARG
235
A
ASN
236
n
236
ASN
236
A
ALA
237
n
237
ALA
237
A
THR
238
n
238
THR
238
A
PRO
239
n
239
PRO
239
A
ILE
240
n
240
ILE
240
A
THR
241
n
241
THR
241
A
ASN
242
n
242
ASN
242
A
LYS
243
n
243
LYS
243
A
PHE
244
n
244
PHE
244
A
THR
245
n
245
THR
245
A
ASN
246
n
246
ASN
246
A
THR
247
n
247
THR
247
A
SER
248
n
248
SER
248
A
GLY
249
n
249
GLY
249
A
PHE
250
n
250
PHE
250
A
ALA
251
n
251
ALA
251
A
ASN
252
n
252
ASN
252
A
LYS
253
n
253
LYS
253
A
THR
254
n
254
THR
254
A
GLN
255
n
255
GLN
255
A
ASP
256
n
256
ASP
256
A
VAL
257
n
257
VAL
257
A
LEU
258
n
258
LEU
258
A
LEU
259
n
259
LEU
259
A
VAL
260
n
260
VAL
260
A
ALA
261
n
261
ALA
261
A
GLN
262
n
262
GLN
262
A
TYR
263
n
263
TYR
263
A
GLN
264
n
264
GLN
264
A
PHE
265
n
265
PHE
265
A
ASP
266
n
266
ASP
266
A
PHE
267
n
267
PHE
267
A
GLY
268
n
268
GLY
268
A
LEU
269
n
269
LEU
269
A
ARG
270
n
270
ARG
270
A
PRO
271
n
271
PRO
271
A
SER
272
n
272
SER
272
A
ILE
273
n
273
ILE
273
A
ALA
274
n
274
ALA
274
A
TYR
275
n
275
TYR
275
A
THR
276
n
276
THR
276
A
LYS
277
n
277
LYS
277
A
SER
278
n
278
SER
278
A
LYS
279
n
279
LYS
279
A
ALA
280
n
280
ALA
280
A
LYS
281
n
281
LYS
281
A
ASP
282
n
282
ASP
282
A
VAL
283
n
283
VAL
283
A
GLU
284
n
284
GLU
284
A
GLY
285
n
285
GLY
285
A
ILE
286
n
286
ILE
286
A
GLY
287
n
287
GLY
287
A
ASP
288
n
288
ASP
288
A
VAL
289
n
289
VAL
289
A
ASP
290
n
290
ASP
290
A
LEU
291
n
291
LEU
291
A
VAL
292
n
292
VAL
292
A
ASN
293
n
293
ASN
293
A
TYR
294
n
294
TYR
294
A
PHE
295
n
295
PHE
295
A
GLU
296
n
296
GLU
296
A
VAL
297
n
297
VAL
297
A
GLY
298
n
298
GLY
298
A
ALA
299
n
299
ALA
299
A
THR
300
n
300
THR
300
A
TYR
301
n
301
TYR
301
A
TYR
302
n
302
TYR
302
A
PHE
303
n
303
PHE
303
A
ASN
304
n
304
ASN
304
A
LYS
305
n
305
LYS
305
A
ASN
306
n
306
ASN
306
A
MET
307
n
307
MET
307
A
SER
308
n
308
SER
308
A
THR
309
n
309
THR
309
A
TYR
310
n
310
TYR
310
A
VAL
311
n
311
VAL
311
A
ASP
312
n
312
ASP
312
A
TYR
313
n
313
TYR
313
A
ILE
314
n
314
ILE
314
A
ILE
315
n
315
ILE
315
A
ASN
316
n
316
ASN
316
A
GLN
317
n
317
GLN
317
A
ILE
318
n
318
ILE
318
A
ASP
319
n
319
ASP
319
A
SER
320
n
320
SER
320
A
ASP
321
n
321
ASP
321
A
ASN
322
n
322
ASN
322
A
LYS
323
n
323
LYS
323
A
LEU
324
n
324
LEU
324
A
GLY
325
n
325
GLY
325
A
VAL
326
n
326
VAL
326
A
GLY
327
n
327
GLY
327
A
SER
328
n
328
SER
328
A
ASP
329
n
329
ASP
329
A
ASP
330
n
330
ASP
330
A
THR
331
n
331
THR
331
A
VAL
332
n
332
VAL
332
A
ALA
333
n
333
ALA
333
A
VAL
334
n
334
VAL
334
A
GLY
335
n
335
GLY
335
A
ILE
336
n
336
ILE
336
A
VAL
337
n
337
VAL
337
A
TYR
338
n
338
TYR
338
A
GLN
339
n
339
GLN
339
A
PHE
340
n
340
PHE
340
A
author_and_software_defined_assembly
PISA
3
trimeric
8590
-58
40500
A
HOH
660
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
661
E
O
HOH
1_555
88.1
A
HOH
660
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
662
E
O
HOH
1_555
89.6
A
HOH
661
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
662
E
O
HOH
1_555
172.3
A
HOH
660
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
663
E
O
HOH
1_555
84.2
A
HOH
661
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
663
E
O
HOH
1_555
96.4
A
HOH
662
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
663
E
O
HOH
1_555
76.0
A
HOH
660
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
664
E
O
HOH
1_555
94.0
A
HOH
661
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
664
E
O
HOH
1_555
97.9
A
HOH
662
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
664
E
O
HOH
1_555
89.6
A
HOH
663
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
664
E
O
HOH
1_555
165.5
A
HOH
660
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
665
E
O
HOH
1_555
175.1
A
HOH
661
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
665
E
O
HOH
1_555
90.7
A
HOH
662
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
665
E
O
HOH
1_555
91.0
A
HOH
663
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
665
E
O
HOH
1_555
91.2
A
HOH
664
E
O
HOH
1_555
A
MG
341
B
MG
MG
1_555
A
HOH
665
E
O
HOH
1_555
90.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-y+1,x-y+1,z
crystal symmetry operation
58.4615000000
101.2582882867
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_565
-x+y,-x+1,z
crystal symmetry operation
-58.4615000000
101.2582882867
0.0000000000
A
N
LEU
43
A
N
LEU
43
A
O
TYR
63
A
O
TYR
63
A
N
GLU
62
A
N
GLU
62
A
O
ARG
82
A
O
ARG
82
A
N
ALA
84
A
N
ALA
84
A
O
ARG
100
A
O
ARG
100
A
N
ASP
97
A
N
ASP
97
A
O
THR
138
A
O
THR
138
A
N
TYR
139
A
N
TYR
139
A
O
VAL
155
A
O
VAL
155
A
N
GLN
156
A
N
GLN
156
A
O
GLY
175
A
O
GLY
175
A
N
GLY
176
A
N
GLY
176
A
O
TYR
191
A
O
TYR
191
A
N
ALA
194
A
N
ALA
194
A
O
ALA
211
A
O
ALA
211
A
N
THR
216
A
N
THR
216
A
O
TYR
231
A
O
TYR
231
A
N
GLY
232
A
N
GLY
232
A
O
ASP
256
A
O
ASP
256
A
N
LEU
259
A
N
LEU
259
A
O
TYR
275
A
O
TYR
275
A
N
SER
278
A
N
SER
278
A
O
LEU
291
A
O
LEU
291
A
N
TYR
301
A
N
TYR
301
A
O
THR
309
A
O
THR
309
A
N
SER
308
A
N
SER
308
A
O
VAL
337
A
O
VAL
337
A
O
VAL
332
A
O
VAL
332
A
N
PHE
23
A
N
PHE
23
A
N
TYR
22
A
N
TYR
22
A
O
GLY
36
A
O
GLY
36
A
N
ASN
242
A
N
ASN
242
A
O
THR
247
A
O
THR
247
1
A
HOH
621
E
HOH
1
A
ASN
27
A
ASN
27
1
Y
1
A
ALA
84
-165.57
100.65
1
A
ALA
91
33.12
-119.50
1
A
GLU
117
-133.96
-45.20
1
A
PHE
118
-95.79
-148.04
1
A
ALA
123
-90.26
58.22
1
A
PHE
128
58.29
-110.41
1
A
ASN
293
-165.73
105.42
1
A
ASN
304
-166.51
-164.19
27.534
-1.10
-0.55
0.00
-1.10
0.00
1.66
0.966
0.948
THE ELECTRON DENSITY AT RESIDUE ASN27 IS SMALL; THE OCCUPANCY AT THIS SITE IN OTHER OMPF STRUCTURES, 1HXX AND 2OMF, IS ZERO.
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.21837
0.18078
0.18256
1.59
36.1
2740
51108
5.1
99.34
1.360
0.050
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.081
0.086
0.80
0.80
1.20
2OMF
MAXIMUM LIKELIHOOD
MASK
1.59
36.1
322
3006
43
0
2641
0.010
0.022
2736
1.218
1.943
3689
5.899
5.000
337
37.233
25.000
146
13.074
15.000
407
15.258
15.000
11
0.090
0.200
379
0.005
0.020
2150
0.193
0.200
1114
0.305
0.200
1893
0.115
0.200
273
0.082
0.200
2
0.146
0.200
73
0.143
0.200
18
0.807
1.500
1684
1.378
2.000
2628
2.162
3.000
1200
3.092
4.500
1061
0.261
0.227
1.634
179
3547
20
93.64
1.59
101.02
2ZFG
53879
-3.0
0.079
1
8.4
99.5
refinement
REFMAC
5.2.0019
data collection
HKL-3000
data reduction
HKL-3000
data scaling
SCALEPACK
phasing
REFMAC
5.2.0019
Structure of OMPF PORIN
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
A
VAL
105
A
VAL
105
HELX_P
A
GLY
110
A
GLY
110
1
1
6
A
SER
142
A
SER
142
HELX_P
A
LEU
147
A
LEU
147
1
2
6
A
THR
197
A
THR
197
HELX_P
A
ALA
202
A
ALA
202
1
3
6
metalc
2.118
A
MG
341
B
MG
MG
1_555
A
HOH
660
E
O
HOH
1_555
metalc
2.023
A
MG
341
B
MG
MG
1_555
A
HOH
661
E
O
HOH
1_555
metalc
2.145
A
MG
341
B
MG
MG
1_555
A
HOH
662
E
O
HOH
1_555
metalc
2.228
A
MG
341
B
MG
MG
1_555
A
HOH
663
E
O
HOH
1_555
metalc
1.875
A
MG
341
B
MG
MG
1_555
A
HOH
664
E
O
HOH
1_555
metalc
1.976
A
MG
341
B
MG
MG
1_555
A
HOH
665
E
O
HOH
1_555
MEMBRANE PROTEIN
OmpF PORIN, Ordered Waters, Ion transport, Membrane, Outer membrane, Phage recognition, Transmembrane, Transport, MEMBRANE PROTEIN
OMPF_ECOLI
UNP
1
23
P02931
AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGK
NERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPI
TNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS
DNKLGVGSDDTVAVGIVYQF
23
362
2ZFG
1
340
P02931
A
1
1
340
19
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
2
A
GLU
2
A
LYS
6
A
LYS
6
A
GLY
36
A
GLY
36
A
ASP
37
A
ASP
37
A
TYR
40
A
TYR
40
A
GLN
50
A
GLN
50
A
LEU
55
A
LEU
55
A
GLN
66
A
GLN
66
A
LYS
80
A
LYS
80
A
TYR
90
A
TYR
90
A
GLY
94
A
GLY
94
A
TYR
102
A
TYR
102
A
ARG
132
A
ARG
132
A
ASN
141
A
ASN
141
A
LEU
151
A
LEU
151
A
LEU
158
A
LEU
158
A
GLY
173
A
GLY
173
A
TYR
182
A
TYR
182
A
PHE
185
A
PHE
185
A
ASP
195
A
ASP
195
A
LYS
210
A
LYS
210
A
ALA
222
A
ALA
222
A
ILE
225
A
ILE
225
A
ARG
235
A
ARG
235
A
LYS
253
A
LYS
253
A
TYR
263
A
TYR
263
A
LEU
269
A
LEU
269
A
VAL
283
A
VAL
283
A
GLY
287
A
GLY
287
A
ASN
304
A
ASN
304
A
MET
307
A
MET
307
A
ASN
316
A
ASN
316
A
THR
331
A
THR
331
A
PHE
340
A
PHE
340
A
ASN
9
A
ASN
9
A
PHE
23
A
PHE
23
A
GLY
36
A
GLY
36
A
ASP
37
A
ASP
37
A
PRO
239
A
PRO
239
A
ASN
242
A
ASN
242
A
THR
247
A
THR
247
A
PHE
250
A
PHE
250
BINDING SITE FOR RESIDUE MG A 341
A
MG
341
Software
6
BINDING SITE FOR RESIDUE C8E A 342
A
C8E
342
Software
6
BINDING SITE FOR RESIDUE C8E A 343
A
C8E
343
Software
5
A
HOH
660
E
HOH
6
1_555
A
HOH
661
E
HOH
6
1_555
A
HOH
662
E
HOH
6
1_555
A
HOH
663
E
HOH
6
1_555
A
HOH
664
E
HOH
6
1_555
A
HOH
665
E
HOH
6
1_555
A
TYR
98
A
TYR
98
6
2_665
A
LEU
158
A
LEU
158
6
2_665
A
ASP
172
A
ASP
172
6
2_665
A
GLY
173
A
GLY
173
6
2_665
A
ALA
193
A
ALA
193
6
2_665
A
LYS
210
A
LYS
210
6
2_665
A
PHE
267
A
PHE
267
5
4_555
A
LEU
269
A
LEU
269
5
4_555
A
PRO
271
A
PRO
271
5
1_555
A
ILE
273
A
ILE
273
5
1_555
A
GLY
298
A
GLY
298
5
1_555
150
P 3 2 1