0.013697 0.000000 0.000000 0.000000 0.013697 0.000000 0.000000 0.000000 0.006617 0.00000 0.00000 0.00000 Zhao, H. Volkov, A. Veldore, V.H. Varughese, K.I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 32 90.000 90.000 90.000 73.010 73.010 151.120 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Microbiology 0026-2617 156 385 391 10.1099/mic.0.033548-0 19926656 Crystal structure of the transcriptional repressor PagR of Bacillus anthracis 2010 100 1 Mirrors CCD 2005-10-24 ADSC QUANTUM 4 Double flat crystal, Si(111) MAD M x-ray 1 0.97969 1.0 1.00344 1.0 1.037 1.0 8.3.1 ALS 0.97969, 1.00344, 1.037 SYNCHROTRON ALS BEAMLINE 8.3.1 11809.277 Transcriptional repressor pagR 4 man polymer 18.015 water 79 nat water Protective antigen repressor no yes (MSE)TVFVDHKIEY(MSE)SLEDDAELLKT(MSE)AHP(MSE)RLKIVNELYKHKALNVTQIIQILKLPQSTVSQHLCK (MSE)RGKVLKRNRQGLEIYYSINNPKVEGIIKLLNPIQ MTVFVDHKIEYMSLEDDAELLKTMAHPMRLKIVNELYKHKALNVTQIIQILKLPQSTVSQHLCKMRGKVLKRNRQGLEIY YSINNPKVEGIIKLLNPIQ A,B,C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample pagR, tcrA 1392 Bacillus anthracis 562 Escherichia coli BL21(DE3) plasmid pET28a 1 2.14 42.53 5.6 0.2M Na Acetate, 1.6M NaH2PO4, 0.4M K2HPO4, pH5.6, hanging drop, temperature 298K 298 software repository Initial release Version format compliance Database references Refinement description 1 0 2009-04-07 1 1 2011-07-13 1 2 2011-11-30 1 3 2017-10-11 PDBJ Y PDBJ 2008-04-01 REL REL HOH water WAT 2 2 HOH HOH 100 A WAT 3 2 HOH HOH 101 A WAT 4 2 HOH HOH 102 A WAT 7 2 HOH HOH 103 A WAT 8 2 HOH HOH 104 A WAT 9 2 HOH HOH 105 A WAT 10 2 HOH HOH 106 A WAT 11 2 HOH HOH 107 A WAT 13 2 HOH HOH 108 A WAT 14 2 HOH HOH 109 A WAT 19 2 HOH HOH 110 A WAT 21 2 HOH HOH 111 A WAT 22 2 HOH HOH 112 A WAT 23 2 HOH HOH 113 A WAT 28 2 HOH HOH 114 A WAT 29 2 HOH HOH 115 A WAT 33 2 HOH HOH 116 A WAT 35 2 HOH HOH 117 A WAT 42 2 HOH HOH 118 A WAT 44 2 HOH HOH 119 A WAT 46 2 HOH HOH 120 A WAT 48 2 HOH HOH 121 A WAT 53 2 HOH HOH 122 A WAT 66 2 HOH HOH 123 A WAT 67 2 HOH HOH 124 A WAT 69 2 HOH HOH 125 A WAT 70 2 HOH HOH 126 A WAT 72 2 HOH HOH 127 A WAT 75 2 HOH HOH 128 A WAT 74 2 HOH HOH 129 A WAT 30 2 HOH HOH 130 A WAT 1 2 HOH HOH 100 B WAT 12 2 HOH HOH 101 B WAT 15 2 HOH HOH 102 B WAT 16 2 HOH HOH 103 B WAT 17 2 HOH HOH 104 B WAT 24 2 HOH HOH 105 B WAT 27 2 HOH HOH 106 B WAT 31 2 HOH HOH 107 B WAT 39 2 HOH HOH 108 B WAT 40 2 HOH HOH 109 B WAT 41 2 HOH HOH 110 B WAT 45 2 HOH HOH 111 B WAT 49 2 HOH HOH 112 B WAT 50 2 HOH HOH 113 B WAT 56 2 HOH HOH 114 B WAT 57 2 HOH HOH 115 B WAT 60 2 HOH HOH 116 B WAT 62 2 HOH HOH 117 B WAT 63 2 HOH HOH 118 B WAT 68 2 HOH HOH 119 B WAT 71 2 HOH HOH 120 B WAT 78 2 HOH HOH 122 B WAT 79 2 HOH HOH 123 B WAT 5 2 HOH HOH 100 C WAT 6 2 HOH HOH 101 C WAT 18 2 HOH HOH 102 C WAT 20 2 HOH HOH 103 C WAT 32 2 HOH HOH 105 C WAT 36 2 HOH HOH 106 C WAT 37 2 HOH HOH 107 C WAT 47 2 HOH HOH 108 C WAT 52 2 HOH HOH 109 C WAT 55 2 HOH HOH 110 C WAT 58 2 HOH HOH 111 C WAT 59 2 HOH HOH 112 C WAT 77 2 HOH HOH 113 C WAT 25 2 HOH HOH 100 D WAT 26 2 HOH HOH 101 D WAT 34 2 HOH HOH 102 D WAT 38 2 HOH HOH 103 D WAT 43 2 HOH HOH 104 D WAT 51 2 HOH HOH 105 D WAT 54 2 HOH HOH 106 D WAT 61 2 HOH HOH 107 D WAT 64 2 HOH HOH 108 D WAT 65 2 HOH HOH 109 D WAT 73 2 HOH HOH 110 D WAT 76 2 HOH HOH 111 D n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A ALA 11 n 11 TYR 11 A MSE 12 n 12 MSE 12 A SER 13 n 13 SER 13 A LEU 14 n 14 LEU 14 A GLU 15 n 15 GLU 15 A ASP 16 n 16 ASP 16 A ASP 17 n 17 ASP 17 A ALA 18 n 18 ALA 18 A GLU 19 n 19 GLU 19 A LEU 20 n 20 LEU 20 A LEU 21 n 21 LEU 21 A LYS 22 n 22 LYS 22 A THR 23 n 23 THR 23 A MSE 24 n 24 MSE 24 A ALA 25 n 25 ALA 25 A HIS 26 n 26 HIS 26 A PRO 27 n 27 PRO 27 A MSE 28 n 28 MSE 28 A ARG 29 n 29 ARG 29 A LEU 30 n 30 LEU 30 A LYS 31 n 31 LYS 31 A ILE 32 n 32 ILE 32 A VAL 33 n 33 VAL 33 A ASN 34 n 34 ASN 34 A GLU 35 n 35 GLU 35 A LEU 36 n 36 LEU 36 A TYR 37 n 37 TYR 37 A LYS 38 n 38 LYS 38 A HIS 39 n 39 HIS 39 A LYS 40 n 40 LYS 40 A ALA 41 n 41 ALA 41 A LEU 42 n 42 LEU 42 A ASN 43 n 43 ASN 43 A VAL 44 n 44 VAL 44 A THR 45 n 45 THR 45 A GLN 46 n 46 GLN 46 A ILE 47 n 47 ILE 47 A ILE 48 n 48 ILE 48 A GLN 49 n 49 GLN 49 A ILE 50 n 50 ILE 50 A LEU 51 n 51 LEU 51 A LYS 52 n 52 LYS 52 A LEU 53 n 53 LEU 53 A PRO 54 n 54 PRO 54 A GLN 55 n 55 GLN 55 A SER 56 n 56 SER 56 A THR 57 n 57 THR 57 A VAL 58 n 58 VAL 58 A SER 59 n 59 SER 59 A GLN 60 n 60 GLN 60 A HIS 61 n 61 HIS 61 A LEU 62 n 62 LEU 62 A CYS 63 n 63 CYS 63 A LYS 64 n 64 LYS 64 A MSE 65 n 65 MSE 65 A ARG 66 n 66 ARG 66 A GLY 67 n 67 GLY 67 A LYS 68 n 68 LYS 68 A VAL 69 n 69 VAL 69 A LEU 70 n 70 LEU 70 A LYS 71 n 71 LYS 71 A ARG 72 n 72 ARG 72 A ASN 73 n 73 ASN 73 A ARG 74 n 74 ARG 74 A GLN 75 n 75 GLN 75 A GLY 76 n 76 GLY 76 A LEU 77 n 77 LEU 77 A GLU 78 n 78 GLU 78 A ILE 79 n 79 ILE 79 A TYR 80 n 80 TYR 80 A TYR 81 n 81 TYR 81 A SER 82 n 82 SER 82 A ILE 83 n 83 ILE 83 A ASN 84 n 84 ASN 84 A ASN 85 n 85 ASN 85 A PRO 86 n 86 PRO 86 A LYS 87 n 87 LYS 87 A VAL 88 n 88 VAL 88 A GLU 89 n 89 GLU 89 A GLY 90 n 90 GLY 90 A ILE 91 n 91 ILE 91 A ILE 92 n 92 ILE 92 A LYS 93 n 93 LYS 93 A LEU 94 n 94 LEU 94 A LEU 95 n 95 LEU 95 A ASN 96 n 96 ASN 96 A n 97 97 A n 98 98 A n 99 99 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B n 6 6 B n 7 7 B n 8 8 B n 9 9 B n 10 10 B TYR 11 n 11 TYR 11 B MSE 12 n 12 MSE 12 B SER 13 n 13 SER 13 B LEU 14 n 14 LEU 14 B GLU 15 n 15 GLU 15 B ASP 16 n 16 ASP 16 B ASP 17 n 17 ASP 17 B ALA 18 n 18 ALA 18 B GLU 19 n 19 GLU 19 B LEU 20 n 20 LEU 20 B LEU 21 n 21 LEU 21 B LYS 22 n 22 LYS 22 B THR 23 n 23 THR 23 B MSE 24 n 24 MSE 24 B ALA 25 n 25 ALA 25 B HIS 26 n 26 HIS 26 B PRO 27 n 27 PRO 27 B MSE 28 n 28 MSE 28 B ARG 29 n 29 ARG 29 B LEU 30 n 30 LEU 30 B LYS 31 n 31 LYS 31 B ILE 32 n 32 ILE 32 B VAL 33 n 33 VAL 33 B ASN 34 n 34 ASN 34 B GLU 35 n 35 GLU 35 B LEU 36 n 36 LEU 36 B TYR 37 n 37 TYR 37 B LYS 38 n 38 LYS 38 B HIS 39 n 39 HIS 39 B LYS 40 n 40 LYS 40 B ALA 41 n 41 ALA 41 B LEU 42 n 42 LEU 42 B ASN 43 n 43 ASN 43 B VAL 44 n 44 VAL 44 B THR 45 n 45 THR 45 B GLN 46 n 46 GLN 46 B ILE 47 n 47 ILE 47 B ILE 48 n 48 ILE 48 B GLN 49 n 49 GLN 49 B ILE 50 n 50 ILE 50 B LEU 51 n 51 LEU 51 B LYS 52 n 52 LYS 52 B LEU 53 n 53 LEU 53 B PRO 54 n 54 PRO 54 B GLN 55 n 55 GLN 55 B SER 56 n 56 SER 56 B THR 57 n 57 THR 57 B VAL 58 n 58 VAL 58 B SER 59 n 59 SER 59 B GLN 60 n 60 GLN 60 B HIS 61 n 61 HIS 61 B LEU 62 n 62 LEU 62 B CYS 63 n 63 CYS 63 B LYS 64 n 64 LYS 64 B MSE 65 n 65 MSE 65 B ARG 66 n 66 ARG 66 B GLY 67 n 67 GLY 67 B LYS 68 n 68 LYS 68 B VAL 69 n 69 VAL 69 B LEU 70 n 70 LEU 70 B LYS 71 n 71 LYS 71 B ARG 72 n 72 ARG 72 B ASN 73 n 73 ASN 73 B ARG 74 n 74 ARG 74 B GLN 75 n 75 GLN 75 B GLY 76 n 76 GLY 76 B LEU 77 n 77 LEU 77 B GLU 78 n 78 GLU 78 B ILE 79 n 79 ILE 79 B TYR 80 n 80 TYR 80 B TYR 81 n 81 TYR 81 B SER 82 n 82 SER 82 B ILE 83 n 83 ILE 83 B ASN 84 n 84 ASN 84 B ASN 85 n 85 ASN 85 B PRO 86 n 86 PRO 86 B LYS 87 n 87 LYS 87 B VAL 88 n 88 VAL 88 B GLU 89 n 89 GLU 89 B GLY 90 n 90 GLY 90 B ILE 91 n 91 ILE 91 B ILE 92 n 92 ILE 92 B LYS 93 n 93 LYS 93 B LEU 94 n 94 LEU 94 B LEU 95 n 95 LEU 95 B ASN 96 n 96 ASN 96 B n 97 97 B n 98 98 B n 99 99 B n 1 1 C n 2 2 C n 3 3 C n 4 4 C n 5 5 C n 6 6 C n 7 7 C n 8 8 C n 9 9 C GLU 10 n 10 GLU 10 C TYR 11 n 11 TYR 11 C MSE 12 n 12 MSE 12 C SER 13 n 13 SER 13 C LEU 14 n 14 LEU 14 C GLU 15 n 15 GLU 15 C ASP 16 n 16 ASP 16 C ASP 17 n 17 ASP 17 C ALA 18 n 18 ALA 18 C GLU 19 n 19 GLU 19 C LEU 20 n 20 LEU 20 C LEU 21 n 21 LEU 21 C LYS 22 n 22 LYS 22 C THR 23 n 23 THR 23 C MSE 24 n 24 MSE 24 C ALA 25 n 25 ALA 25 C HIS 26 n 26 HIS 26 C PRO 27 n 27 PRO 27 C MSE 28 n 28 MSE 28 C ARG 29 n 29 ARG 29 C LEU 30 n 30 LEU 30 C LYS 31 n 31 LYS 31 C ILE 32 n 32 ILE 32 C VAL 33 n 33 VAL 33 C ASN 34 n 34 ASN 34 C GLU 35 n 35 GLU 35 C LEU 36 n 36 LEU 36 C TYR 37 n 37 TYR 37 C LYS 38 n 38 LYS 38 C HIS 39 n 39 HIS 39 C LYS 40 n 40 LYS 40 C ALA 41 n 41 ALA 41 C LEU 42 n 42 LEU 42 C ASN 43 n 43 ASN 43 C VAL 44 n 44 VAL 44 C THR 45 n 45 THR 45 C GLN 46 n 46 GLN 46 C ILE 47 n 47 ILE 47 C ILE 48 n 48 ILE 48 C GLN 49 n 49 GLN 49 C ILE 50 n 50 ILE 50 C LEU 51 n 51 LEU 51 C LYS 52 n 52 LYS 52 C LEU 53 n 53 LEU 53 C PRO 54 n 54 PRO 54 C GLN 55 n 55 GLN 55 C SER 56 n 56 SER 56 C THR 57 n 57 THR 57 C VAL 58 n 58 VAL 58 C SER 59 n 59 SER 59 C GLN 60 n 60 GLN 60 C HIS 61 n 61 HIS 61 C LEU 62 n 62 LEU 62 C CYS 63 n 63 CYS 63 C LYS 64 n 64 LYS 64 C MSE 65 n 65 MSE 65 C ARG 66 n 66 ARG 66 C GLY 67 n 67 GLY 67 C LYS 68 n 68 LYS 68 C VAL 69 n 69 VAL 69 C LEU 70 n 70 LEU 70 C LYS 71 n 71 LYS 71 C ARG 72 n 72 ARG 72 C ASN 73 n 73 ASN 73 C ARG 74 n 74 ARG 74 C GLN 75 n 75 GLN 75 C GLY 76 n 76 GLY 76 C LEU 77 n 77 LEU 77 C GLU 78 n 78 GLU 78 C ILE 79 n 79 ILE 79 C TYR 80 n 80 TYR 80 C TYR 81 n 81 TYR 81 C SER 82 n 82 SER 82 C ILE 83 n 83 ILE 83 C ASN 84 n 84 ASN 84 C ASN 85 n 85 ASN 85 C PRO 86 n 86 PRO 86 C LYS 87 n 87 LYS 87 C VAL 88 n 88 VAL 88 C GLU 89 n 89 GLU 89 C GLY 90 n 90 GLY 90 C ILE 91 n 91 ILE 91 C ILE 92 n 92 ILE 92 C LYS 93 n 93 LYS 93 C LEU 94 n 94 LEU 94 C LEU 95 n 95 LEU 95 C ALA 96 n 96 ASN 96 C n 97 97 C n 98 98 C n 99 99 C n 1 1 D n 2 2 D n 3 3 D n 4 4 D n 5 5 D n 6 6 D n 7 7 D n 8 8 D n 9 9 D GLU 10 n 10 GLU 10 D TYR 11 n 11 TYR 11 D MSE 12 n 12 MSE 12 D SER 13 n 13 SER 13 D LEU 14 n 14 LEU 14 D GLU 15 n 15 GLU 15 D ASP 16 n 16 ASP 16 D ASP 17 n 17 ASP 17 D ALA 18 n 18 ALA 18 D GLU 19 n 19 GLU 19 D LEU 20 n 20 LEU 20 D LEU 21 n 21 LEU 21 D LYS 22 n 22 LYS 22 D THR 23 n 23 THR 23 D MSE 24 n 24 MSE 24 D ALA 25 n 25 ALA 25 D HIS 26 n 26 HIS 26 D PRO 27 n 27 PRO 27 D MSE 28 n 28 MSE 28 D ARG 29 n 29 ARG 29 D LEU 30 n 30 LEU 30 D LYS 31 n 31 LYS 31 D ILE 32 n 32 ILE 32 D VAL 33 n 33 VAL 33 D ASN 34 n 34 ASN 34 D GLU 35 n 35 GLU 35 D LEU 36 n 36 LEU 36 D TYR 37 n 37 TYR 37 D LYS 38 n 38 LYS 38 D HIS 39 n 39 HIS 39 D LYS 40 n 40 LYS 40 D ALA 41 n 41 ALA 41 D LEU 42 n 42 LEU 42 D ASN 43 n 43 ASN 43 D VAL 44 n 44 VAL 44 D THR 45 n 45 THR 45 D GLN 46 n 46 GLN 46 D ILE 47 n 47 ILE 47 D ILE 48 n 48 ILE 48 D GLN 49 n 49 GLN 49 D ILE 50 n 50 ILE 50 D LEU 51 n 51 LEU 51 D LYS 52 n 52 LYS 52 D LEU 53 n 53 LEU 53 D PRO 54 n 54 PRO 54 D GLN 55 n 55 GLN 55 D SER 56 n 56 SER 56 D THR 57 n 57 THR 57 D VAL 58 n 58 VAL 58 D SER 59 n 59 SER 59 D GLN 60 n 60 GLN 60 D HIS 61 n 61 HIS 61 D LEU 62 n 62 LEU 62 D CYS 63 n 63 CYS 63 D LYS 64 n 64 LYS 64 D MSE 65 n 65 MSE 65 D ARG 66 n 66 ARG 66 D GLY 67 n 67 GLY 67 D LYS 68 n 68 LYS 68 D VAL 69 n 69 VAL 69 D LEU 70 n 70 LEU 70 D ALA 71 n 71 LYS 71 D ARG 72 n 72 ARG 72 D n 73 73 D n 74 74 D n 75 75 D n 76 76 D n 77 77 D n 78 78 D n 79 79 D TYR 80 n 80 TYR 80 D TYR 81 n 81 TYR 81 D SER 82 n 82 SER 82 D ILE 83 n 83 ILE 83 D ASN 84 n 84 ASN 84 D ASN 85 n 85 ASN 85 D PRO 86 n 86 PRO 86 D LYS 87 n 87 LYS 87 D VAL 88 n 88 VAL 88 D GLU 89 n 89 GLU 89 D GLY 90 n 90 GLY 90 D ILE 91 n 91 ILE 91 D ILE 92 n 92 ILE 92 D LYS 93 n 93 LYS 93 D LEU 94 n 94 LEU 94 D LEU 95 n 95 LEU 95 D ASN 96 n 96 ASN 96 D PRO 97 n 97 PRO 97 D ILE 98 n 98 ILE 98 D n 99 99 D author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric 1670 -22.0 9710 1710 -18.8 10110 1940 -22.2 8990 A MSE 12 SELENOMETHIONINE A MSE 12 MET A MSE 24 SELENOMETHIONINE A MSE 24 MET A MSE 28 SELENOMETHIONINE A MSE 28 MET A MSE 65 SELENOMETHIONINE A MSE 65 MET B MSE 12 SELENOMETHIONINE B MSE 12 MET B MSE 24 SELENOMETHIONINE B MSE 24 MET B MSE 28 SELENOMETHIONINE B MSE 28 MET B MSE 65 SELENOMETHIONINE B MSE 65 MET C MSE 12 SELENOMETHIONINE C MSE 12 MET C MSE 24 SELENOMETHIONINE C MSE 24 MET C MSE 28 SELENOMETHIONINE C MSE 28 MET C MSE 65 SELENOMETHIONINE C MSE 65 MET D MSE 12 SELENOMETHIONINE D MSE 12 MET D MSE 24 SELENOMETHIONINE D MSE 24 MET D MSE 28 SELENOMETHIONINE D MSE 28 MET D MSE 65 SELENOMETHIONINE D MSE 65 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 151.1200000000 A N LEU 42 A N LEU 42 A O TYR 81 A O TYR 81 A O SER 82 A O SER 82 A N LYS 71 A N LYS 71 B N LEU 42 B N LEU 42 B O TYR 81 B O TYR 81 B O TYR 80 B O TYR 80 B N ASN 73 B N ASN 73 C N LEU 42 C N LEU 42 C O TYR 81 C O TYR 81 C O TYR 80 C O TYR 80 C N ASN 73 C N ASN 73 D N LYS 71 D N LYS 71 D O SER 82 D O SER 82 1 A CG TYR 11 A CG TYR 11 1 Y 1 A CD1 TYR 11 A CD1 TYR 11 1 Y 1 A CD2 TYR 11 A CD2 TYR 11 1 Y 1 A CE1 TYR 11 A CE1 TYR 11 1 Y 1 A CE2 TYR 11 A CE2 TYR 11 1 Y 1 A CZ TYR 11 A CZ TYR 11 1 Y 1 A OH TYR 11 A OH TYR 11 1 Y 1 C CG ASN 96 C CG ASN 96 1 Y 1 C OD1 ASN 96 C OD1 ASN 96 1 Y 1 C ND2 ASN 96 C ND2 ASN 96 1 Y 1 D CG LYS 71 D CG LYS 71 1 Y 1 D CD LYS 71 D CD LYS 71 1 Y 1 D CE LYS 71 D CE LYS 71 1 Y 1 D NZ LYS 71 D NZ LYS 71 1 Y 1 A MSE 1 A MSE 1 1 Y 1 A THR 2 A THR 2 1 Y 1 A VAL 3 A VAL 3 1 Y 1 A PHE 4 A PHE 4 1 Y 1 A VAL 5 A VAL 5 1 Y 1 A ASP 6 A ASP 6 1 Y 1 A HIS 7 A HIS 7 1 Y 1 A LYS 8 A LYS 8 1 Y 1 A ILE 9 A ILE 9 1 Y 1 A GLU 10 A GLU 10 1 Y 1 A PRO 97 A PRO 97 1 Y 1 A ILE 98 A ILE 98 1 Y 1 A GLN 99 A GLN 99 1 Y 1 B MSE 1 B MSE 1 1 Y 1 B THR 2 B THR 2 1 Y 1 B VAL 3 B VAL 3 1 Y 1 B PHE 4 B PHE 4 1 Y 1 B VAL 5 B VAL 5 1 Y 1 B ASP 6 B ASP 6 1 Y 1 B HIS 7 B HIS 7 1 Y 1 B LYS 8 B LYS 8 1 Y 1 B ILE 9 B ILE 9 1 Y 1 B GLU 10 B GLU 10 1 Y 1 B PRO 97 B PRO 97 1 Y 1 B ILE 98 B ILE 98 1 Y 1 B GLN 99 B GLN 99 1 Y 1 C MSE 1 C MSE 1 1 Y 1 C THR 2 C THR 2 1 Y 1 C VAL 3 C VAL 3 1 Y 1 C PHE 4 C PHE 4 1 Y 1 C VAL 5 C VAL 5 1 Y 1 C ASP 6 C ASP 6 1 Y 1 C HIS 7 C HIS 7 1 Y 1 C LYS 8 C LYS 8 1 Y 1 C ILE 9 C ILE 9 1 Y 1 C PRO 97 C PRO 97 1 Y 1 C ILE 98 C ILE 98 1 Y 1 C GLN 99 C GLN 99 1 Y 1 D MSE 1 D MSE 1 1 Y 1 D THR 2 D THR 2 1 Y 1 D VAL 3 D VAL 3 1 Y 1 D PHE 4 D PHE 4 1 Y 1 D VAL 5 D VAL 5 1 Y 1 D ASP 6 D ASP 6 1 Y 1 D HIS 7 D HIS 7 1 Y 1 D LYS 8 D LYS 8 1 Y 1 D ILE 9 D ILE 9 1 Y 1 D ASN 73 D ASN 73 1 Y 1 D ARG 74 D ARG 74 1 Y 1 D GLN 75 D GLN 75 1 Y 1 D GLY 76 D GLY 76 1 Y 1 D LEU 77 D LEU 77 1 Y 1 D GLU 78 D GLU 78 1 Y 1 D ILE 79 D ILE 79 1 Y 1 D GLN 99 D GLN 99 1 Y 1 A LYS 40 66.27 -41.26 1 B ALA 25 -67.11 51.52 1 B LYS 40 74.67 -55.83 1 C ALA 25 -64.88 49.04 1 C LYS 40 70.96 -47.62 1 D ALA 25 -67.23 45.62 1 D LYS 40 68.37 -43.29 1 D ASN 84 -86.97 -91.70 protein_rep.param water_rep.param 37.603 1.615 0.000 0.000 1.615 0.000 -3.231 0.266 0.246 2.000 32.87 1341 27628 4.700 97.100 0.822 RANDOM 1 Isotropic THROUGHOUT 2.00 MAD Engh & Huber 51.851 2.000 32.87 79 2841 0 0 2762 0.005 1.084 1.75 100 2ZKZ 42122 36646 2.3 2.3 0.067 0.067 1 45.7 12.6 87 0.435 1.75 1.80 2.3 4125 0.435 1 4 49.0 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package phasing Tom Terwilliger terwilliger@LANL.gov http://www.solve.lanl.gov/ SOLVE package phasing Terwilliger, T. C terwilliger@LANL.gov http://www.solve.lanl.gov/ RESOLVE package refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns.csb.yale.edu/v1.1/ CNS package data extraction PDB sw-help@rcsb.rutgers.edu September 10, 2007 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 3.005 data collection ADSC Quantum Transcriptional repressor pagR Crystal structure of the transcriptional repressor PagR of Bacillus anthracis 1 N N 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N A SER 13 A SER 13 HELX_P A ALA 25 A ALA 25 1 1 13 A HIS 26 A HIS 26 HELX_P A LYS 40 A LYS 40 1 2 15 A VAL 44 A VAL 44 HELX_P A LYS 52 A LYS 52 1 3 9 A PRO 54 A PRO 54 HELX_P A ARG 66 A ARG 66 1 4 13 A ASN 85 A ASN 85 HELX_P A ASN 96 A ASN 96 1 5 12 B TYR 11 B TYR 11 HELX_P B ALA 25 B ALA 25 1 6 15 B HIS 26 B HIS 26 HELX_P B LYS 40 B LYS 40 1 7 15 B VAL 44 B VAL 44 HELX_P B LYS 52 B LYS 52 1 8 9 B PRO 54 B PRO 54 HELX_P B ARG 66 B ARG 66 1 9 13 B ASN 85 B ASN 85 HELX_P B ASN 96 B ASN 96 1 10 12 C GLU 10 C GLU 10 HELX_P C ALA 25 C ALA 25 1 11 16 C HIS 26 C HIS 26 HELX_P C LYS 40 C LYS 40 1 12 15 C VAL 44 C VAL 44 HELX_P C LYS 52 C LYS 52 1 13 9 C PRO 54 C PRO 54 HELX_P C ARG 66 C ARG 66 1 14 13 C ASN 85 C ASN 85 HELX_P C ASN 96 C ASN 96 1 15 12 D SER 13 D SER 13 HELX_P D ALA 25 D ALA 25 1 16 13 D HIS 26 D HIS 26 HELX_P D LYS 40 D LYS 40 1 17 15 D ASN 43 D ASN 43 HELX_P D LYS 52 D LYS 52 1 18 10 D PRO 54 D PRO 54 HELX_P D ARG 66 D ARG 66 1 19 13 D ASN 85 D ASN 85 HELX_P D ASN 96 D ASN 96 1 20 12 covale 1.328 A TYR 11 A C TYR 11 1_555 A MSE 12 A N MSE 12 1_555 covale 1.327 A MSE 12 A C MSE 12 1_555 A SER 13 A N SER 13 1_555 covale 1.330 A THR 23 A C THR 23 1_555 A MSE 24 A N MSE 24 1_555 covale 1.330 A MSE 24 A C MSE 24 1_555 A ALA 25 A N ALA 25 1_555 covale 1.325 A PRO 27 A C PRO 27 1_555 A MSE 28 A N MSE 28 1_555 covale 1.330 A MSE 28 A C MSE 28 1_555 A ARG 29 A N ARG 29 1_555 covale 1.328 A LYS 64 A C LYS 64 1_555 A MSE 65 A N MSE 65 1_555 covale 1.328 A MSE 65 A C MSE 65 1_555 A ARG 66 A N ARG 66 1_555 covale 1.332 B TYR 11 B C TYR 11 1_555 B MSE 12 B N MSE 12 1_555 covale 1.330 B MSE 12 B C MSE 12 1_555 B SER 13 B N SER 13 1_555 covale 1.332 B THR 23 B C THR 23 1_555 B MSE 24 B N MSE 24 1_555 covale 1.328 B MSE 24 B C MSE 24 1_555 B ALA 25 B N ALA 25 1_555 covale 1.326 B PRO 27 B C PRO 27 1_555 B MSE 28 B N MSE 28 1_555 covale 1.328 B MSE 28 B C MSE 28 1_555 B ARG 29 B N ARG 29 1_555 covale 1.330 B LYS 64 B C LYS 64 1_555 B MSE 65 B N MSE 65 1_555 covale 1.328 B MSE 65 B C MSE 65 1_555 B ARG 66 B N ARG 66 1_555 covale 1.330 C TYR 11 C C TYR 11 1_555 C MSE 12 C N MSE 12 1_555 covale 1.327 C MSE 12 C C MSE 12 1_555 C SER 13 C N SER 13 1_555 covale 1.330 C THR 23 C C THR 23 1_555 C MSE 24 C N MSE 24 1_555 covale 1.331 C MSE 24 C C MSE 24 1_555 C ALA 25 C N ALA 25 1_555 covale 1.329 C PRO 27 C C PRO 27 1_555 C MSE 28 C N MSE 28 1_555 covale 1.329 C MSE 28 C C MSE 28 1_555 C ARG 29 C N ARG 29 1_555 covale 1.326 C LYS 64 C C LYS 64 1_555 C MSE 65 C N MSE 65 1_555 covale 1.330 C MSE 65 C C MSE 65 1_555 C ARG 66 C N ARG 66 1_555 covale 1.330 D TYR 11 D C TYR 11 1_555 D MSE 12 D N MSE 12 1_555 covale 1.329 D MSE 12 D C MSE 12 1_555 D SER 13 D N SER 13 1_555 covale 1.329 D THR 23 D C THR 23 1_555 D MSE 24 D N MSE 24 1_555 covale 1.330 D MSE 24 D C MSE 24 1_555 D ALA 25 D N ALA 25 1_555 covale 1.329 D PRO 27 D C PRO 27 1_555 D MSE 28 D N MSE 28 1_555 covale 1.328 D MSE 28 D C MSE 28 1_555 D ARG 29 D N ARG 29 1_555 covale 1.328 D LYS 64 D C LYS 64 1_555 D MSE 65 D N MSE 65 1_555 covale 1.328 D MSE 65 D C MSE 65 1_555 D ARG 66 D N ARG 66 1_555 TRANSCRIPTION transcriptional repressor, protein-DNA, HTH motif, dimer, DNA-binding, Transcription regulation, TRANSCRIPTION D ASN 96 D ASN 96 1 D PRO 97 D PRO 97 0.24 PAGR_BACAN UNP 1 1 O31178 MTVFVDHKIEYMSLEDDAELLKTMAHPMRLKIVNELYKHKALNVTQIIQILKLPQSTVSQHLCKMRGKVLKRNRQGLEIY YSINNPKVEGIIKLLNPIQ 1 99 2ZKZ 1 99 O31178 A 1 1 99 1 99 2ZKZ 1 99 O31178 B 1 1 99 1 99 2ZKZ 1 99 O31178 C 1 1 99 1 99 2ZKZ 1 99 O31178 D 1 1 99 3 3 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 42 A LEU 42 A ASN 43 A ASN 43 A GLU 78 A GLU 78 A SER 82 A SER 82 A LYS 71 A LYS 71 A GLN 75 A GLN 75 B LEU 42 B LEU 42 B ASN 43 B ASN 43 B GLU 78 B GLU 78 B ILE 83 B ILE 83 B LEU 70 B LEU 70 B GLN 75 B GLN 75 C LEU 42 C LEU 42 C ASN 43 C ASN 43 C GLU 78 C GLU 78 C ILE 83 C ILE 83 C LEU 70 C LEU 70 C GLN 75 C GLN 75 D LEU 70 D LEU 70 D LYS 71 D LYS 71 D SER 82 D SER 82 D ILE 83 D ILE 83 92 P 41 21 2