data_316D # _entry.id 316D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 316D pdb_0000316d 10.2210/pdb316d/pdb RCSB DDH071 ? ? WWPDB D_1000178784 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-11-05 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2012-12-12 6 'Structure model' 1 5 2018-04-25 7 'Structure model' 1 6 2022-12-21 8 'Structure model' 2 0 2023-11-15 9 'Structure model' 2 1 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Other 9 6 'Structure model' Advisory 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Structure summary' 12 7 'Structure model' 'Database references' 13 7 'Structure model' 'Derived calculations' 14 8 'Structure model' 'Atomic model' 15 8 'Structure model' 'Data collection' 16 8 'Structure model' 'Derived calculations' 17 9 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' chem_comp 2 6 'Structure model' pdbx_validate_polymer_linkage 3 7 'Structure model' database_2 4 7 'Structure model' struct_conn 5 7 'Structure model' struct_ref_seq_dif 6 8 'Structure model' atom_site 7 8 'Structure model' chem_comp_atom 8 8 'Structure model' chem_comp_bond 9 8 'Structure model' struct_conn 10 9 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_chem_comp.pdbx_synonyms' 2 7 'Structure model' '_database_2.pdbx_DOI' 3 7 'Structure model' '_database_2.pdbx_database_accession' 4 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 7 'Structure model' '_struct_ref_seq_dif.details' 6 8 'Structure model' '_atom_site.auth_atom_id' 7 8 'Structure model' '_atom_site.label_atom_id' 8 8 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 8 'Structure model' '_struct_conn.ptnr2_label_atom_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 316D _pdbx_database_status.recvd_initial_deposition_date 1997-03-05 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1A7Z unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN Z3' PDB 209D unspecified 'CRYSTAL STRUCTURE OF N8-ACTINOMYCIN D COMPLEXED WITH D(GAAGCTTC)2' PDB 1UNM unspecified 'CRYSTAL STRUCTURE OF 7-AMINOACTINOMYCIN D COMPLEXED WITH NON-COMPLEMENTARY DNA' PDB 1I3W unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (CGATCGATCG)2' PDB 1A7Y unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN D' PDB 1FJA unspecified 'SOLUTION STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (AAGCGCTT)2' PDB 173D unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GAAGCTTC)2' PDB 2D55 unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GAAGCTTC)2' PDB 1DSC unspecified 'SOLUTION STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GAAGCTTC)2' PDB 1L1V unspecified 'SOLUTION STRUCTURE OF ACTNIOMYCIN D COMPLEXED WITH MISMATCHED DNA (GTCACCGAC)' PDB 1DSD unspecified 'SOLUTION STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GATGCTTC)2' PDB 1MNV unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (ATGCTGCAT)2' PDB 1UNJ unspecified 'CRYSTAL STRUCTURE OF 7-AMINO-ACTINOMYCIN D COMPLEXED WITH A NON-COMPLEMENTARY DNA (TTAGT)2' PDB 1OVF unspecified 'SOLUTIOM STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (CCGTTTTGTGG)2' PDB 1QFI unspecified 'CRYSTAL STRUCTURE OF ACTINOMYCIN X2' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Takusagawa, F.' 1 'Takusagawa, K.T.' 2 'Carlson, R.G.' 3 'Weaver, R.F.' 4 # _citation.id primary _citation.title 'Selectivity of F8-Actinomycin D for RNA:DNA Hybrids and its Anti-Leukemia Activity.' _citation.journal_abbrev Bioorg.Med.Chem. _citation.journal_volume 5 _citation.page_first 1197 _citation.page_last ? _citation.year 1997 _citation.journal_id_ASTM BMECEP _citation.country UK _citation.journal_id_ISSN 0968-0896 _citation.journal_id_CSD 1200 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9222513 _citation.pdbx_database_id_DOI '10.1016/S0968-0896(97)00062-X' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Takusagawa, F.' 1 ? primary 'Takusagawa, K.T.' 2 ? primary 'Carlson, R.G.' 3 ? primary 'Weaver, R.F.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') ; 2426.617 2 ? ? ? ? 2 polymer nat '8-FLUORO-ACTINOMYCIN D' 1277.438 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name DACTINOMYCIN # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DG)(DC)(DT)(DT)(DC)' GAAGCTTC A,B ? 2 'polypeptide(L)' no yes 'T(DVA)P(SAR)(MVA)(PXF)T(DVA)P(SAR)(MVA)' TVPGVXTVPGV C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DA n 1 4 DG n 1 5 DC n 1 6 DT n 1 7 DT n 1 8 DC n 2 1 THR n 2 2 DVA n 2 3 PRO n 2 4 SAR n 2 5 MVA n 2 6 PXF n 2 7 THR n 2 8 DVA n 2 9 PRO n 2 10 SAR n 2 11 MVA n # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'STREPTOMYCES ANTIBIOTICUS' _entity_src_nat.pdbx_ncbi_taxonomy_id 1890 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 MVA 'L-peptide linking' n N-METHYLVALINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PXF non-polymer . 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-8-FLUORO-3-OXOPHENOXAZINE 8-FLUORO-PHENOXAZINE 'C16 H11 F N2 O4' 314.268 PXZ non-polymer . 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE PHENOXAZINE 'C16 H12 N2 O4' 296.277 SAR 'peptide linking' n SARCOSINE ? 'C3 H7 N O2' 89.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DC 8 8 8 DC DC A . n B 1 1 DG 1 9 9 DG DG B . n B 1 2 DA 2 10 10 DA DA B . n B 1 3 DA 3 11 11 DA DA B . n B 1 4 DG 4 12 12 DG DG B . n B 1 5 DC 5 13 13 DC DC B . n B 1 6 DT 6 14 14 DT DT B . n B 1 7 DT 7 15 15 DT DT B . n B 1 8 DC 8 16 16 DC DC B . n C 2 1 THR 1 1 1 THR THR C . n C 2 2 DVA 2 2 2 DVA DVA C . n C 2 3 PRO 3 3 3 PRO PRO C . n C 2 4 SAR 4 4 4 SAR SAR C . n C 2 5 MVA 5 5 5 MVA MVA C . n C 2 6 PXF 6 6 6 PXF PXF C . n C 2 7 THR 7 7 7 THR THR C . n C 2 8 DVA 8 8 8 DVA DVA C . n C 2 9 PRO 9 9 9 PRO PRO C . n C 2 10 SAR 10 10 10 SAR SAR C . n C 2 11 MVA 11 11 11 MVA MVA C . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 ELMS 'data reduction' . ? 3 KUAVST 'data scaling' . ? 4 KUMDS 'data scaling' . ? 5 X-PLOR phasing . ? 6 # _cell.entry_id 316D _cell.length_a 62.770 _cell.length_b 62.770 _cell.length_c 43.030 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 316D _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.entry_id 316D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.04 _exptl_crystal.density_percent_sol 75.60 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PH 7.00, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 299.00K' # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 MGCL2 ? ? ? 1 4 1 CACODYLATE ? ? ? 1 5 1 SPERMINE_HCL ? ? ? 1 6 2 WATER ? ? ? 1 7 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 299.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MACSCIENCE _diffrn_detector.pdbx_collection_date 1995-03-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE 002' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 316D _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 7.000 _reflns.d_resolution_high 3.000 _reflns.number_obs 1839 _reflns.number_all ? _reflns.percent_possible_obs 95.0 _reflns.pdbx_Rmerge_I_obs 0.07500 _reflns.pdbx_Rsym_value 0.07500 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.20 _reflns_shell.percent_possible_all 90.0 _reflns_shell.Rmerge_I_obs 0.00180 _reflns_shell.pdbx_Rsym_value 0.00180 _reflns_shell.meanI_over_sigI_obs 2.200 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 316D _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 1839 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 7.00 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 95.0 _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.212 _refine.ls_R_factor_R_free 0.261 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.000 _refine.ls_number_reflns_R_free 184 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 38.00 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model DDH051 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 91 _refine_hist.pdbx_number_atoms_nucleic_acid 322 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 413 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 7.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.40 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 24.00 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 1 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.20 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.2610 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 10.00 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 316D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 316D _struct.title 'Selectivity of F8-actinomycin D for RNA:DNA hybrids and its anti-leukemia activity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 316D _struct_keywords.pdbx_keywords DNA/ANTIBIOTIC _struct_keywords.text 'ACTINOMYCIN D, ACTINOMYCIN, F8-ACTINOMYCIN, ANTI CANCER, ANTITUMOR, CHROMOPHORE, DEPSIPEPTIDE, DNA-ANTIBIOTIC COMPLEX, ANTIBIOTIC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 316D 1 ? ? 316D ? 2 NOR NOR00228 2 ? ? NOR00228 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 316D A 1 ? 8 ? 316D 1 ? 8 ? 1 8 2 1 316D B 1 ? 8 ? 316D 9 ? 16 ? 9 16 3 2 316D C 1 ? 11 ? NOR00228 1 ? 11 ? 1 11 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 316D _struct_ref_seq_dif.mon_id PXF _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 6 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name NOR _struct_ref_seq_dif.pdbx_seq_db_accession_code NOR00228 _struct_ref_seq_dif.db_mon_id PXZ _struct_ref_seq_dif.pdbx_seq_db_seq_num 6 _struct_ref_seq_dif.details chromophore _struct_ref_seq_dif.pdbx_auth_seq_num 6 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C THR 1 C ? ? ? 1_555 C DVA 2 N ? ? C THR 1 C DVA 2 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale one ? C THR 1 OG1 ? ? ? 1_555 C MVA 5 C ? ? C THR 1 C MVA 5 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale3 covale one ? C THR 1 N ? ? ? 1_555 C PXF 6 C0 ? ? C THR 1 C PXF 6 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? C DVA 2 C ? ? ? 1_555 C PRO 3 N ? ? C DVA 2 C PRO 3 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale5 covale both ? C PRO 3 C ? ? ? 1_555 C SAR 4 N ? ? C PRO 3 C SAR 4 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale6 covale both ? C SAR 4 C ? ? ? 1_555 C MVA 5 N ? ? C SAR 4 C MVA 5 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale7 covale one ? C PXF 6 "C0'" ? ? ? 1_555 C THR 7 N ? ? C PXF 6 C THR 7 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale8 covale both ? C THR 7 C ? ? ? 1_555 C DVA 8 N ? ? C THR 7 C DVA 8 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale one ? C THR 7 OG1 ? ? ? 1_555 C MVA 11 C ? ? C THR 7 C MVA 11 1_555 ? ? ? ? ? ? ? 1.388 ? ? covale10 covale both ? C DVA 8 C ? ? ? 1_555 C PRO 9 N ? ? C DVA 8 C PRO 9 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale11 covale both ? C PRO 9 C ? ? ? 1_555 C SAR 10 N ? ? C PRO 9 C SAR 10 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale12 covale both ? C SAR 10 C ? ? ? 1_555 C MVA 11 N ? ? C SAR 10 C MVA 11 1_555 ? ? ? ? ? ? ? 1.350 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 2 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 2 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 3 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 3 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 6 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 6 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 7 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 7 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 DVA 2 C . ? DVA 2 C PRO 3 C ? PRO 3 C 1 1.84 2 PRO 3 C . ? PRO 3 C SAR 4 C ? SAR 4 C 1 1.27 3 DVA 8 C . ? DVA 8 C PRO 9 C ? PRO 9 C 1 0.51 4 PRO 9 C . ? PRO 9 C SAR 10 C ? SAR 10 C 1 -4.67 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR CHAIN C OF 8-FLUORO-ACTINOMYCIN D' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 DG A 4 ? DG A 4 . ? 1_555 ? 2 AC1 8 DC A 5 ? DC A 5 . ? 1_555 ? 3 AC1 8 DT A 6 ? DT A 6 . ? 1_555 ? 4 AC1 8 DA B 3 ? DA B 11 . ? 1_555 ? 5 AC1 8 DG B 4 ? DG B 12 . ? 1_555 ? 6 AC1 8 DC B 5 ? DC B 13 . ? 1_555 ? 7 AC1 8 DT B 6 ? DT B 14 . ? 1_555 ? 8 AC1 8 DT B 7 ? DT B 15 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.41 108.30 3.11 0.30 N 2 1 P A DA 2 ? ? "O5'" A DA 2 ? ? "C5'" A DA 2 ? ? 131.81 120.90 10.91 1.60 N 3 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 110.23 108.30 1.93 0.30 N 4 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 95.32 102.20 -6.88 0.70 N 5 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 114.94 108.30 6.64 0.30 N 6 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 114.01 108.30 5.71 0.30 N 7 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.60 108.30 3.30 0.30 N 8 1 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.55 122.90 -4.35 0.60 N 9 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.55 108.30 3.25 0.30 N 10 1 N1 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 122.63 118.90 3.73 0.60 N 11 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 110.11 108.30 1.81 0.30 N 12 1 "C3'" B DG 9 ? ? "O3'" B DG 9 ? ? P B DA 10 ? ? 128.25 119.70 8.55 1.20 Y 13 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9 B DA 10 ? ? 111.97 108.30 3.67 0.30 N 14 1 "C3'" B DA 10 ? ? "O3'" B DA 10 ? ? P B DA 11 ? ? 132.04 119.70 12.34 1.20 Y 15 1 "O4'" B DA 11 ? ? "C1'" B DA 11 ? ? N9 B DA 11 ? ? 111.49 108.30 3.19 0.30 N 16 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 110.77 108.30 2.47 0.30 N 17 1 "C3'" B DG 12 ? ? "O3'" B DG 12 ? ? P B DC 13 ? ? 130.58 119.70 10.88 1.20 Y 18 1 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 116.76 108.30 8.46 0.30 N 19 1 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 123.08 118.90 4.18 0.60 N 20 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.59 108.30 4.29 0.30 N 21 1 N3 B DT 14 ? ? C2 B DT 14 ? ? O2 B DT 14 ? ? 118.24 122.30 -4.06 0.60 N 22 1 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.80 122.90 -4.10 0.60 N 23 1 "C4'" B DT 15 ? ? "C3'" B DT 15 ? ? "C2'" B DT 15 ? ? 97.70 102.20 -4.50 0.70 N 24 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 110.18 108.30 1.88 0.30 N 25 1 C6 B DT 15 ? ? C5 B DT 15 ? ? C7 B DT 15 ? ? 119.10 122.90 -3.80 0.60 N 26 1 "C1'" B DC 16 ? ? "O4'" B DC 16 ? ? "C4'" B DC 16 ? ? 103.96 110.10 -6.14 1.00 N 27 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 111.05 108.30 2.75 0.30 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 12 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.065 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_molecule_features.prd_id PRD_000006 _pdbx_molecule_features.name '8-Fluoro-Actinomycin D' _pdbx_molecule_features.type Polypeptide _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;ACTINOMYCIN D CONSISTS OF TWO PENTAMER RINGS LINKED BY THE CHROMOPHORE (PXF) THE CHROMOPHORE PXF IS A MODIFIED PXZ WITH C-F REPLACING C-H IN POSITION 8 OF THE PHENOXAZONE RING. ; # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000006 _pdbx_molecule.asym_id C # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'INTERCALATION, GROOVE BINDER' # _refine_B_iso.class 'ALL ATOMS' _refine_B_iso.details TR _refine_B_iso.treatment isotropic _refine_B_iso.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_occupancy.class 'ALL ATOMS' _refine_occupancy.treatment fix _refine_occupancy.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_entry_details.entry_id 316D _pdbx_entry_details.compound_details ;ACTINOMYCIN D IS A BICYCLIC PEPTIDE, A MEMBER OF THE ACTINOMYCIN FAMILY. HERE, ACTINOMYCIN D IS REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 DVA N N N N 144 DVA CA C N R 145 DVA CB C N N 146 DVA CG1 C N N 147 DVA CG2 C N N 148 DVA C C N N 149 DVA O O N N 150 DVA OXT O N N 151 DVA H H N N 152 DVA H2 H N N 153 DVA HA H N N 154 DVA HB H N N 155 DVA HG11 H N N 156 DVA HG12 H N N 157 DVA HG13 H N N 158 DVA HG21 H N N 159 DVA HG22 H N N 160 DVA HG23 H N N 161 DVA HXT H N N 162 MVA N N N N 163 MVA CN C N N 164 MVA CA C N S 165 MVA CB C N N 166 MVA CG1 C N N 167 MVA CG2 C N N 168 MVA C C N N 169 MVA O O N N 170 MVA OXT O N N 171 MVA H H N N 172 MVA HN1 H N N 173 MVA HN2 H N N 174 MVA HN3 H N N 175 MVA HA H N N 176 MVA HB H N N 177 MVA HG11 H N N 178 MVA HG12 H N N 179 MVA HG13 H N N 180 MVA HG21 H N N 181 MVA HG22 H N N 182 MVA HG23 H N N 183 MVA HXT H N N 184 PRO N N N N 185 PRO CA C N S 186 PRO C C N N 187 PRO O O N N 188 PRO CB C N N 189 PRO CG C N N 190 PRO CD C N N 191 PRO OXT O N N 192 PRO H H N N 193 PRO HA H N N 194 PRO HB2 H N N 195 PRO HB3 H N N 196 PRO HG2 H N N 197 PRO HG3 H N N 198 PRO HD2 H N N 199 PRO HD3 H N N 200 PRO HXT H N N 201 PXF C1 C N N 202 PXF C0 C N N 203 PXF O1 O N N 204 PXF C2 C N N 205 PXF N2 N N N 206 PXF C3 C N N 207 PXF O3 O N N 208 PXF C4 C N N 209 PXF O5 O N N 210 PXF C6 C Y N 211 PXF C7 C Y N 212 PXF C8 C Y N 213 PXF F8 F N N 214 PXF C9 C Y N 215 PXF "C0'" C N N 216 PXF "O1'" O N N 217 PXF N10 N N N 218 PXF C11 C N N 219 PXF C12 C N N 220 PXF C13 C Y N 221 PXF C14 C Y N 222 PXF C15 C N N 223 PXF C16 C N N 224 PXF H1 H N N 225 PXF HN21 H N N 226 PXF HN22 H N N 227 PXF H7 H N N 228 PXF "H1'" H N N 229 PXF H151 H N N 230 PXF H152 H N N 231 PXF H153 H N N 232 PXF H161 H N N 233 PXF H162 H N N 234 PXF H163 H N N 235 PXZ C1 C Y N 236 PXZ C0 C N N 237 PXZ O1 O N N 238 PXZ C2 C Y N 239 PXZ N2 N N N 240 PXZ C3 C Y N 241 PXZ O3 O N N 242 PXZ C4 C Y N 243 PXZ O5 O Y N 244 PXZ C6 C Y N 245 PXZ C7 C Y N 246 PXZ C8 C Y N 247 PXZ C9 C Y N 248 PXZ "C0'" C N N 249 PXZ "O1'" O N N 250 PXZ N10 N Y N 251 PXZ C11 C Y N 252 PXZ C12 C Y N 253 PXZ C13 C Y N 254 PXZ C14 C Y N 255 PXZ C15 C N N 256 PXZ C16 C N N 257 PXZ H1 H N N 258 PXZ HN21 H N N 259 PXZ HN22 H N N 260 PXZ H7 H N N 261 PXZ H8 H N N 262 PXZ "H1'" H N N 263 PXZ H151 H N N 264 PXZ H152 H N N 265 PXZ H153 H N N 266 PXZ H161 H N N 267 PXZ H162 H N N 268 PXZ H163 H N N 269 SAR N N N N 270 SAR CA C N N 271 SAR C C N N 272 SAR O O N N 273 SAR CN C N N 274 SAR OXT O N N 275 SAR H H N N 276 SAR HA2 H N N 277 SAR HA3 H N N 278 SAR HN1 H N N 279 SAR HN2 H N N 280 SAR HN3 H N N 281 SAR HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 DVA N CA sing N N 150 DVA N H sing N N 151 DVA N H2 sing N N 152 DVA CA CB sing N N 153 DVA CA C sing N N 154 DVA CA HA sing N N 155 DVA CB CG1 sing N N 156 DVA CB CG2 sing N N 157 DVA CB HB sing N N 158 DVA CG1 HG11 sing N N 159 DVA CG1 HG12 sing N N 160 DVA CG1 HG13 sing N N 161 DVA CG2 HG21 sing N N 162 DVA CG2 HG22 sing N N 163 DVA CG2 HG23 sing N N 164 DVA C O doub N N 165 DVA C OXT sing N N 166 DVA OXT HXT sing N N 167 MVA N CN sing N N 168 MVA N CA sing N N 169 MVA N H sing N N 170 MVA CN HN1 sing N N 171 MVA CN HN2 sing N N 172 MVA CN HN3 sing N N 173 MVA CA CB sing N N 174 MVA CA C sing N N 175 MVA CA HA sing N N 176 MVA CB CG1 sing N N 177 MVA CB CG2 sing N N 178 MVA CB HB sing N N 179 MVA CG1 HG11 sing N N 180 MVA CG1 HG12 sing N N 181 MVA CG1 HG13 sing N N 182 MVA CG2 HG21 sing N N 183 MVA CG2 HG22 sing N N 184 MVA CG2 HG23 sing N N 185 MVA C O doub N N 186 MVA C OXT sing N N 187 MVA OXT HXT sing N N 188 PRO N CA sing N N 189 PRO N CD sing N N 190 PRO N H sing N N 191 PRO CA C sing N N 192 PRO CA CB sing N N 193 PRO CA HA sing N N 194 PRO C O doub N N 195 PRO C OXT sing N N 196 PRO CB CG sing N N 197 PRO CB HB2 sing N N 198 PRO CB HB3 sing N N 199 PRO CG CD sing N N 200 PRO CG HG2 sing N N 201 PRO CG HG3 sing N N 202 PRO CD HD2 sing N N 203 PRO CD HD3 sing N N 204 PRO OXT HXT sing N N 205 PXF C1 C0 sing N N 206 PXF C1 C2 doub N N 207 PXF C1 C11 sing N N 208 PXF C0 O1 doub N N 209 PXF C0 H1 sing N N 210 PXF C2 N2 sing N N 211 PXF C2 C3 sing N N 212 PXF N2 HN21 sing N N 213 PXF N2 HN22 sing N N 214 PXF C3 O3 doub N N 215 PXF C3 C4 sing N N 216 PXF C4 C12 doub N N 217 PXF C4 C15 sing N N 218 PXF O5 C12 sing N N 219 PXF O5 C13 sing N N 220 PXF C6 C7 doub Y N 221 PXF C6 C13 sing Y N 222 PXF C6 C16 sing N N 223 PXF C7 C8 sing Y N 224 PXF C7 H7 sing N N 225 PXF C8 F8 sing N N 226 PXF C8 C9 doub Y N 227 PXF C9 "C0'" sing N N 228 PXF C9 C14 sing Y N 229 PXF "C0'" "O1'" doub N N 230 PXF "C0'" "H1'" sing N N 231 PXF N10 C11 doub N N 232 PXF N10 C14 sing N N 233 PXF C11 C12 sing N N 234 PXF C13 C14 doub Y N 235 PXF C15 H151 sing N N 236 PXF C15 H152 sing N N 237 PXF C15 H153 sing N N 238 PXF C16 H161 sing N N 239 PXF C16 H162 sing N N 240 PXF C16 H163 sing N N 241 PXZ C1 C0 sing N N 242 PXZ C1 C2 doub Y N 243 PXZ C1 C11 sing Y N 244 PXZ C0 O1 doub N N 245 PXZ C0 H1 sing N N 246 PXZ C2 N2 sing N N 247 PXZ C2 C3 sing Y N 248 PXZ N2 HN21 sing N N 249 PXZ N2 HN22 sing N N 250 PXZ C3 O3 doub N N 251 PXZ C3 C4 sing Y N 252 PXZ C4 C12 doub Y N 253 PXZ C4 C15 sing N N 254 PXZ O5 C12 sing Y N 255 PXZ O5 C13 sing Y N 256 PXZ C6 C7 doub Y N 257 PXZ C6 C13 sing Y N 258 PXZ C6 C16 sing N N 259 PXZ C7 C8 sing Y N 260 PXZ C7 H7 sing N N 261 PXZ C8 C9 doub Y N 262 PXZ C8 H8 sing N N 263 PXZ C9 "C0'" sing N N 264 PXZ C9 C14 sing Y N 265 PXZ "C0'" "O1'" doub N N 266 PXZ "C0'" "H1'" sing N N 267 PXZ N10 C11 doub Y N 268 PXZ N10 C14 sing Y N 269 PXZ C11 C12 sing Y N 270 PXZ C13 C14 doub Y N 271 PXZ C15 H151 sing N N 272 PXZ C15 H152 sing N N 273 PXZ C15 H153 sing N N 274 PXZ C16 H161 sing N N 275 PXZ C16 H162 sing N N 276 PXZ C16 H163 sing N N 277 SAR N CA sing N N 278 SAR N CN sing N N 279 SAR N H sing N N 280 SAR CA C sing N N 281 SAR CA HA2 sing N N 282 SAR CA HA3 sing N N 283 SAR C O doub N N 284 SAR C OXT sing N N 285 SAR CN HN1 sing N N 286 SAR CN HN2 sing N N 287 SAR CN HN3 sing N N 288 SAR OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 # _ndb_struct_conf_na.entry_id 316D _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.065 -0.141 -0.027 3.115 -2.871 -1.339 1 A_DG1:DC16_B A 1 ? B 16 ? 19 1 1 A DA 2 1_555 B DT 7 1_555 -0.062 -0.112 -0.032 1.519 -2.560 -7.728 2 A_DA2:DT15_B A 2 ? B 15 ? 20 1 1 A DA 3 1_555 B DT 6 1_555 -0.251 -0.172 0.124 0.642 -4.678 -4.552 3 A_DA3:DT14_B A 3 ? B 14 ? 20 1 1 A DG 4 1_555 B DC 5 1_555 -0.142 -0.179 0.208 -0.078 3.583 -3.301 4 A_DG4:DC13_B A 4 ? B 13 ? 19 1 1 A DC 5 1_555 B DG 4 1_555 0.203 -0.217 0.574 -4.107 3.146 -1.472 5 A_DC5:DG12_B A 5 ? B 12 ? 19 1 1 A DT 6 1_555 B DA 3 1_555 -0.051 -0.066 -0.103 1.718 0.253 -6.493 6 A_DT6:DA11_B A 6 ? B 11 ? 20 1 1 A DT 7 1_555 B DA 2 1_555 0.056 -0.098 -0.013 -4.152 -2.008 -7.738 7 A_DT7:DA10_B A 7 ? B 10 ? 20 1 1 A DC 8 1_555 B DG 1 1_555 0.061 -0.148 0.076 5.763 -5.473 -1.881 8 A_DC8:DG9_B A 8 ? B 9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A DA 2 1_555 B DT 7 1_555 -1.662 -0.816 3.582 -2.426 -2.569 36.564 -0.903 2.267 3.728 -4.084 3.856 36.729 1 AA_DG1DA2:DT15DC16_BB A 1 ? B 16 ? A 2 ? B 15 ? 1 A DA 2 1_555 B DT 7 1_555 A DA 3 1_555 B DT 6 1_555 0.047 -0.119 3.566 -4.085 13.482 44.305 -1.394 -0.436 3.378 17.363 5.261 46.382 2 AA_DA2DA3:DT14DT15_BB A 2 ? B 15 ? A 3 ? B 14 ? 1 A DA 3 1_555 B DT 6 1_555 A DG 4 1_555 B DC 5 1_555 -1.104 -0.227 3.505 -1.473 -0.686 32.573 -0.275 1.689 3.554 -1.221 2.625 32.613 3 AA_DA3DG4:DC13DT14_BB A 3 ? B 14 ? A 4 ? B 13 ? 1 A DG 4 1_555 B DC 5 1_555 A DC 5 1_555 B DG 4 1_555 0.279 0.304 7.300 -4.030 -0.067 11.381 1.634 -12.798 6.790 -0.323 19.537 12.072 4 AA_DG4DC5:DG12DC13_BB A 4 ? B 13 ? A 5 ? B 12 ? 1 A DC 5 1_555 B DG 4 1_555 A DT 6 1_555 B DA 3 1_555 -0.894 0.067 3.516 7.315 11.722 16.646 -4.662 5.406 2.451 33.876 -21.142 21.602 5 AA_DC5DT6:DA11DG12_BB A 5 ? B 12 ? A 6 ? B 11 ? 1 A DT 6 1_555 B DA 3 1_555 A DT 7 1_555 B DA 2 1_555 -0.360 -1.252 3.764 -0.634 -0.284 31.283 -2.260 0.529 3.781 -0.527 1.175 31.291 6 AA_DT6DT7:DA10DA11_BB A 6 ? B 11 ? A 7 ? B 10 ? 1 A DT 7 1_555 B DA 2 1_555 A DC 8 1_555 B DG 1 1_555 0.920 -0.319 3.276 -2.799 1.593 32.820 -0.830 -2.091 3.170 2.811 4.938 32.974 7 AA_DT7DC8:DG9DA10_BB A 7 ? B 10 ? A 8 ? B 9 ? # _pdbx_initial_refinement_model.accession_code 209D _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details DDH051 # _atom_sites.entry_id 316D _atom_sites.fract_transf_matrix[1][1] 0.015931 _atom_sites.fract_transf_matrix[1][2] 0.009198 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018396 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023240 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F H N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 12.950 32.583 16.977 1.00 25.43 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 13.116 32.770 15.570 1.00 38.05 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 14.191 33.828 15.275 1.00 44.60 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 15.425 33.427 15.908 1.00 43.14 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 14.459 33.941 13.776 1.00 51.87 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 15.005 35.197 13.348 1.00 55.94 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 15.514 32.875 13.632 1.00 48.12 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 16.277 32.786 14.942 1.00 46.61 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 16.600 31.384 15.345 1.00 49.90 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 16.721 30.898 16.621 1.00 49.94 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 17.006 29.629 16.686 1.00 44.22 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 17.128 29.239 15.360 1.00 34.57 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 17.468 27.973 14.809 1.00 22.49 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 17.746 26.926 15.395 1.00 26.16 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 17.415 27.984 13.430 1.00 9.10 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 17.141 29.088 12.658 1.00 8.43 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 17.096 28.940 11.335 1.00 7.71 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 16.915 30.292 13.170 1.00 24.40 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 16.872 30.297 14.525 1.00 40.25 ? 1 DG A C4 1 ATOM 20 H H1 . DG A 1 1 ? 17.595 27.109 12.961 0.00 -2.39 ? 1 DG A H1 1 ATOM 21 H H21 . DG A 1 1 ? 17.260 28.046 10.895 0.00 -2.44 ? 1 DG A H21 1 ATOM 22 H H22 . DG A 1 1 ? 16.887 29.747 10.761 0.00 5.78 ? 1 DG A H22 1 ATOM 23 H "HO5'" . DG A 1 1 ? 13.842 32.604 17.337 0.00 -0.09 ? 1 DG A "HO5'" 1 ATOM 24 P P . DA A 1 2 ? 15.255 35.611 11.795 1.00 54.43 ? 2 DA A P 1 ATOM 25 O OP1 . DA A 1 2 ? 15.919 34.500 11.081 1.00 50.91 ? 2 DA A OP1 1 ATOM 26 O OP2 . DA A 1 2 ? 15.913 36.937 11.818 1.00 53.07 ? 2 DA A OP2 1 ATOM 27 O "O5'" . DA A 1 2 ? 13.776 35.845 11.174 1.00 54.66 ? 2 DA A "O5'" 1 ATOM 28 C "C5'" . DA A 1 2 ? 12.725 34.925 10.825 1.00 51.08 ? 2 DA A "C5'" 1 ATOM 29 C "C4'" . DA A 1 2 ? 13.054 33.950 9.690 1.00 50.12 ? 2 DA A "C4'" 1 ATOM 30 O "O4'" . DA A 1 2 ? 13.851 32.835 10.137 1.00 46.85 ? 2 DA A "O4'" 1 ATOM 31 C "C3'" . DA A 1 2 ? 11.768 33.389 9.113 1.00 53.43 ? 2 DA A "C3'" 1 ATOM 32 O "O3'" . DA A 1 2 ? 11.729 33.633 7.697 1.00 62.12 ? 2 DA A "O3'" 1 ATOM 33 C "C2'" . DA A 1 2 ? 11.787 31.939 9.532 1.00 53.67 ? 2 DA A "C2'" 1 ATOM 34 C "C1'" . DA A 1 2 ? 13.234 31.579 9.770 1.00 47.04 ? 2 DA A "C1'" 1 ATOM 35 N N9 . DA A 1 2 ? 13.345 30.608 10.885 1.00 42.23 ? 2 DA A N9 1 ATOM 36 C C8 . DA A 1 2 ? 13.225 30.865 12.221 1.00 39.91 ? 2 DA A C8 1 ATOM 37 N N7 . DA A 1 2 ? 13.417 29.841 12.998 1.00 35.91 ? 2 DA A N7 1 ATOM 38 C C5 . DA A 1 2 ? 13.642 28.808 12.107 1.00 32.65 ? 2 DA A C5 1 ATOM 39 C C6 . DA A 1 2 ? 13.935 27.458 12.314 1.00 29.64 ? 2 DA A C6 1 ATOM 40 N N6 . DA A 1 2 ? 14.043 26.948 13.540 1.00 21.36 ? 2 DA A N6 1 ATOM 41 N N1 . DA A 1 2 ? 14.056 26.677 11.239 1.00 31.00 ? 2 DA A N1 1 ATOM 42 C C2 . DA A 1 2 ? 13.955 27.223 10.033 1.00 33.41 ? 2 DA A C2 1 ATOM 43 N N3 . DA A 1 2 ? 13.764 28.494 9.701 1.00 36.09 ? 2 DA A N3 1 ATOM 44 C C4 . DA A 1 2 ? 13.597 29.251 10.811 1.00 37.04 ? 2 DA A C4 1 ATOM 45 H H61 . DA A 1 2 ? 14.275 25.980 13.691 0.00 2.12 ? 2 DA A H61 1 ATOM 46 H H62 . DA A 1 2 ? 13.893 27.561 14.332 0.00 -0.52 ? 2 DA A H62 1 ATOM 47 P P . DA A 1 3 ? 10.501 33.199 6.746 1.00 66.56 ? 3 DA A P 1 ATOM 48 O OP1 . DA A 1 3 ? 10.662 33.913 5.460 1.00 62.73 ? 3 DA A OP1 1 ATOM 49 O OP2 . DA A 1 3 ? 9.249 33.374 7.518 1.00 67.00 ? 3 DA A OP2 1 ATOM 50 O "O5'" . DA A 1 3 ? 10.691 31.628 6.455 1.00 65.48 ? 3 DA A "O5'" 1 ATOM 51 C "C5'" . DA A 1 3 ? 9.627 30.936 5.791 1.00 63.71 ? 3 DA A "C5'" 1 ATOM 52 C "C4'" . DA A 1 3 ? 9.980 29.521 5.322 1.00 62.37 ? 3 DA A "C4'" 1 ATOM 53 O "O4'" . DA A 1 3 ? 10.612 28.713 6.329 1.00 62.00 ? 3 DA A "O4'" 1 ATOM 54 C "C3'" . DA A 1 3 ? 8.723 28.769 4.911 1.00 60.19 ? 3 DA A "C3'" 1 ATOM 55 O "O3'" . DA A 1 3 ? 9.143 27.767 3.978 1.00 56.94 ? 3 DA A "O3'" 1 ATOM 56 C "C2'" . DA A 1 3 ? 8.335 28.187 6.274 1.00 58.49 ? 3 DA A "C2'" 1 ATOM 57 C "C1'" . DA A 1 3 ? 9.665 27.796 6.912 1.00 53.02 ? 3 DA A "C1'" 1 ATOM 58 N N9 . DA A 1 3 ? 9.779 27.969 8.376 1.00 45.20 ? 3 DA A N9 1 ATOM 59 C C8 . DA A 1 3 ? 9.811 29.139 9.087 1.00 45.06 ? 3 DA A C8 1 ATOM 60 N N7 . DA A 1 3 ? 10.040 28.996 10.360 1.00 40.30 ? 3 DA A N7 1 ATOM 61 C C5 . DA A 1 3 ? 10.124 27.622 10.517 1.00 35.60 ? 3 DA A C5 1 ATOM 62 C C6 . DA A 1 3 ? 10.418 26.833 11.631 1.00 33.45 ? 3 DA A C6 1 ATOM 63 N N6 . DA A 1 3 ? 10.672 27.358 12.832 1.00 34.39 ? 3 DA A N6 1 ATOM 64 N N1 . DA A 1 3 ? 10.431 25.513 11.462 1.00 28.26 ? 3 DA A N1 1 ATOM 65 C C2 . DA A 1 3 ? 10.187 25.007 10.260 1.00 29.85 ? 3 DA A C2 1 ATOM 66 N N3 . DA A 1 3 ? 10.033 25.644 9.105 1.00 29.67 ? 3 DA A N3 1 ATOM 67 C C4 . DA A 1 3 ? 10.009 26.982 9.311 1.00 36.46 ? 3 DA A C4 1 ATOM 68 H H61 . DA A 1 3 ? 10.888 26.781 13.628 0.00 -0.49 ? 3 DA A H61 1 ATOM 69 H H62 . DA A 1 3 ? 10.644 28.364 12.930 0.00 -1.14 ? 3 DA A H62 1 ATOM 70 P P . DG A 1 4 ? 8.182 26.827 3.099 1.00 64.54 ? 4 DG A P 1 ATOM 71 O OP1 . DG A 1 4 ? 9.053 26.036 2.199 1.00 70.05 ? 4 DG A OP1 1 ATOM 72 O OP2 . DG A 1 4 ? 7.136 27.693 2.509 1.00 63.27 ? 4 DG A OP2 1 ATOM 73 O "O5'" . DG A 1 4 ? 7.471 25.820 4.129 1.00 64.07 ? 4 DG A "O5'" 1 ATOM 74 C "C5'" . DG A 1 4 ? 6.782 24.687 3.583 1.00 62.05 ? 4 DG A "C5'" 1 ATOM 75 C "C4'" . DG A 1 4 ? 6.085 23.831 4.629 1.00 58.02 ? 4 DG A "C4'" 1 ATOM 76 O "O4'" . DG A 1 4 ? 6.925 23.570 5.776 1.00 59.12 ? 4 DG A "O4'" 1 ATOM 77 C "C3'" . DG A 1 4 ? 4.847 24.475 5.215 1.00 54.99 ? 4 DG A "C3'" 1 ATOM 78 O "O3'" . DG A 1 4 ? 3.738 24.637 4.315 1.00 48.84 ? 4 DG A "O3'" 1 ATOM 79 C "C2'" . DG A 1 4 ? 4.675 23.474 6.309 1.00 49.58 ? 4 DG A "C2'" 1 ATOM 80 C "C1'" . DG A 1 4 ? 6.060 23.356 6.913 1.00 44.04 ? 4 DG A "C1'" 1 ATOM 81 N N9 . DG A 1 4 ? 6.253 24.313 8.038 1.00 31.13 ? 4 DG A N9 1 ATOM 82 C C8 . DG A 1 4 ? 6.245 25.688 7.998 1.00 34.94 ? 4 DG A C8 1 ATOM 83 N N7 . DG A 1 4 ? 6.481 26.262 9.137 1.00 32.78 ? 4 DG A N7 1 ATOM 84 C C5 . DG A 1 4 ? 6.581 25.204 10.021 1.00 29.03 ? 4 DG A C5 1 ATOM 85 C C6 . DG A 1 4 ? 6.801 25.239 11.416 1.00 28.54 ? 4 DG A C6 1 ATOM 86 O O6 . DG A 1 4 ? 6.935 26.228 12.136 1.00 20.05 ? 4 DG A O6 1 ATOM 87 N N1 . DG A 1 4 ? 6.934 23.973 11.939 1.00 22.56 ? 4 DG A N1 1 ATOM 88 C C2 . DG A 1 4 ? 6.795 22.805 11.225 1.00 27.33 ? 4 DG A C2 1 ATOM 89 N N2 . DG A 1 4 ? 7.012 21.678 11.902 1.00 29.94 ? 4 DG A N2 1 ATOM 90 N N3 . DG A 1 4 ? 6.505 22.757 9.915 1.00 26.05 ? 4 DG A N3 1 ATOM 91 C C4 . DG A 1 4 ? 6.464 24.001 9.368 1.00 25.02 ? 4 DG A C4 1 ATOM 92 H H1 . DG A 1 4 ? 7.137 23.894 12.924 0.00 1.16 ? 4 DG A H1 1 ATOM 93 H H21 . DG A 1 4 ? 7.071 21.684 12.912 0.00 3.03 ? 4 DG A H21 1 ATOM 94 H H22 . DG A 1 4 ? 7.070 20.797 11.416 0.00 -4.51 ? 4 DG A H22 1 ATOM 95 P P . DC A 1 5 ? 2.349 25.358 4.742 1.00 47.25 ? 5 DC A P 1 ATOM 96 O OP1 . DC A 1 5 ? 1.626 25.721 3.502 1.00 49.15 ? 5 DC A OP1 1 ATOM 97 O OP2 . DC A 1 5 ? 2.664 26.410 5.733 1.00 41.86 ? 5 DC A OP2 1 ATOM 98 O "O5'" . DC A 1 5 ? 1.462 24.287 5.550 1.00 40.08 ? 5 DC A "O5'" 1 ATOM 99 C "C5'" . DC A 1 5 ? 0.915 23.143 4.878 1.00 40.48 ? 5 DC A "C5'" 1 ATOM 100 C "C4'" . DC A 1 5 ? -0.046 22.373 5.775 1.00 39.55 ? 5 DC A "C4'" 1 ATOM 101 O "O4'" . DC A 1 5 ? 0.428 22.423 7.132 1.00 39.35 ? 5 DC A "O4'" 1 ATOM 102 C "C3'" . DC A 1 5 ? -1.463 22.929 5.822 1.00 40.98 ? 5 DC A "C3'" 1 ATOM 103 O "O3'" . DC A 1 5 ? -2.255 22.499 4.701 1.00 47.10 ? 5 DC A "O3'" 1 ATOM 104 C "C2'" . DC A 1 5 ? -1.913 22.382 7.149 1.00 39.31 ? 5 DC A "C2'" 1 ATOM 105 C "C1'" . DC A 1 5 ? -0.702 22.501 8.020 1.00 37.69 ? 5 DC A "C1'" 1 ATOM 106 N N1 . DC A 1 5 ? -0.704 23.709 8.895 1.00 33.45 ? 5 DC A N1 1 ATOM 107 C C2 . DC A 1 5 ? -0.642 23.489 10.257 1.00 29.29 ? 5 DC A C2 1 ATOM 108 O O2 . DC A 1 5 ? -0.603 22.356 10.720 1.00 23.03 ? 5 DC A O2 1 ATOM 109 N N3 . DC A 1 5 ? -0.551 24.549 11.079 1.00 30.88 ? 5 DC A N3 1 ATOM 110 C C4 . DC A 1 5 ? -0.564 25.796 10.616 1.00 35.67 ? 5 DC A C4 1 ATOM 111 N N4 . DC A 1 5 ? -0.423 26.791 11.491 1.00 34.40 ? 5 DC A N4 1 ATOM 112 C C5 . DC A 1 5 ? -0.658 26.059 9.211 1.00 32.37 ? 5 DC A C5 1 ATOM 113 C C6 . DC A 1 5 ? -0.704 24.985 8.394 1.00 31.31 ? 5 DC A C6 1 ATOM 114 H H41 . DC A 1 5 ? -0.371 26.606 12.481 0.00 -4.45 ? 5 DC A H41 1 ATOM 115 H H42 . DC A 1 5 ? -0.350 27.742 11.157 0.00 3.36 ? 5 DC A H42 1 ATOM 116 P P . DT A 1 6 ? -3.857 22.717 4.616 1.00 52.07 ? 6 DT A P 1 ATOM 117 O OP1 . DT A 1 6 ? -4.296 22.350 3.249 1.00 49.64 ? 6 DT A OP1 1 ATOM 118 O OP2 . DT A 1 6 ? -4.201 24.046 5.177 1.00 56.73 ? 6 DT A OP2 1 ATOM 119 O "O5'" . DT A 1 6 ? -4.372 21.594 5.653 1.00 54.16 ? 6 DT A "O5'" 1 ATOM 120 C "C5'" . DT A 1 6 ? -5.714 21.375 6.099 1.00 54.99 ? 6 DT A "C5'" 1 ATOM 121 C "C4'" . DT A 1 6 ? -5.717 20.203 7.087 1.00 55.60 ? 6 DT A "C4'" 1 ATOM 122 O "O4'" . DT A 1 6 ? -4.753 20.462 8.130 1.00 50.77 ? 6 DT A "O4'" 1 ATOM 123 C "C3'" . DT A 1 6 ? -7.059 19.985 7.773 1.00 59.69 ? 6 DT A "C3'" 1 ATOM 124 O "O3'" . DT A 1 6 ? -7.267 18.586 8.053 1.00 63.22 ? 6 DT A "O3'" 1 ATOM 125 C "C2'" . DT A 1 6 ? -6.884 20.824 9.023 1.00 53.65 ? 6 DT A "C2'" 1 ATOM 126 C "C1'" . DT A 1 6 ? -5.405 20.766 9.383 1.00 41.62 ? 6 DT A "C1'" 1 ATOM 127 N N1 . DT A 1 6 ? -4.954 22.080 9.933 1.00 35.08 ? 6 DT A N1 1 ATOM 128 C C2 . DT A 1 6 ? -4.631 22.201 11.285 1.00 36.69 ? 6 DT A C2 1 ATOM 129 O O2 . DT A 1 6 ? -4.656 21.275 12.093 1.00 45.95 ? 6 DT A O2 1 ATOM 130 N N3 . DT A 1 6 ? -4.266 23.465 11.725 1.00 26.93 ? 6 DT A N3 1 ATOM 131 C C4 . DT A 1 6 ? -4.178 24.590 10.929 1.00 30.32 ? 6 DT A C4 1 ATOM 132 O O4 . DT A 1 6 ? -3.844 25.664 11.429 1.00 31.81 ? 6 DT A O4 1 ATOM 133 C C5 . DT A 1 6 ? -4.519 24.377 9.541 1.00 25.17 ? 6 DT A C5 1 ATOM 134 C C7 . DT A 1 6 ? -4.489 25.536 8.545 1.00 15.51 ? 6 DT A C7 1 ATOM 135 C C6 . DT A 1 6 ? -4.891 23.167 9.104 1.00 27.35 ? 6 DT A C6 1 ATOM 136 H H3 . DT A 1 6 ? -4.025 23.555 12.700 0.00 -3.27 ? 6 DT A H3 1 ATOM 137 P P . DT A 1 7 ? -8.600 17.999 8.749 1.00 59.01 ? 7 DT A P 1 ATOM 138 O OP1 . DT A 1 7 ? -8.581 16.530 8.564 1.00 56.03 ? 7 DT A OP1 1 ATOM 139 O OP2 . DT A 1 7 ? -9.749 18.781 8.238 1.00 56.17 ? 7 DT A OP2 1 ATOM 140 O "O5'" . DT A 1 7 ? -8.481 18.316 10.324 1.00 46.90 ? 7 DT A "O5'" 1 ATOM 141 C "C5'" . DT A 1 7 ? -7.601 17.568 11.177 1.00 40.51 ? 7 DT A "C5'" 1 ATOM 142 C "C4'" . DT A 1 7 ? -7.751 17.950 12.652 1.00 41.31 ? 7 DT A "C4'" 1 ATOM 143 O "O4'" . DT A 1 7 ? -7.228 19.260 12.914 1.00 42.33 ? 7 DT A "O4'" 1 ATOM 144 C "C3'" . DT A 1 7 ? -9.237 17.925 13.011 1.00 38.41 ? 7 DT A "C3'" 1 ATOM 145 O "O3'" . DT A 1 7 ? -9.559 17.163 14.185 1.00 41.42 ? 7 DT A "O3'" 1 ATOM 146 C "C2'" . DT A 1 7 ? -9.489 19.401 13.241 1.00 38.89 ? 7 DT A "C2'" 1 ATOM 147 C "C1'" . DT A 1 7 ? -8.167 19.960 13.738 1.00 30.99 ? 7 DT A "C1'" 1 ATOM 148 N N1 . DT A 1 7 ? -8.025 21.425 13.528 1.00 20.24 ? 7 DT A N1 1 ATOM 149 C C2 . DT A 1 7 ? -7.715 22.232 14.617 1.00 14.11 ? 7 DT A C2 1 ATOM 150 O O2 . DT A 1 7 ? -7.650 21.841 15.781 1.00 13.77 ? 7 DT A O2 1 ATOM 151 N N3 . DT A 1 7 ? -7.527 23.575 14.346 1.00 10.56 ? 7 DT A N3 1 ATOM 152 C C4 . DT A 1 7 ? -7.649 24.161 13.101 1.00 13.22 ? 7 DT A C4 1 ATOM 153 O O4 . DT A 1 7 ? -7.457 25.366 12.974 1.00 22.21 ? 7 DT A O4 1 ATOM 154 C C5 . DT A 1 7 ? -8.009 23.260 12.037 1.00 10.20 ? 7 DT A C5 1 ATOM 155 C C7 . DT A 1 7 ? -8.336 23.813 10.655 1.00 6.01 ? 7 DT A C7 1 ATOM 156 C C6 . DT A 1 7 ? -8.163 21.952 12.274 1.00 14.32 ? 7 DT A C6 1 ATOM 157 H H3 . DT A 1 7 ? -7.264 24.159 15.125 0.00 -2.00 ? 7 DT A H3 1 ATOM 158 P P . DC A 1 8 ? -11.090 16.669 14.312 1.00 36.69 ? 8 DC A P 1 ATOM 159 O OP1 . DC A 1 8 ? -11.140 15.770 15.489 1.00 35.86 ? 8 DC A OP1 1 ATOM 160 O OP2 . DC A 1 8 ? -11.490 16.136 12.988 1.00 39.27 ? 8 DC A OP2 1 ATOM 161 O "O5'" . DC A 1 8 ? -12.043 17.946 14.623 1.00 44.73 ? 8 DC A "O5'" 1 ATOM 162 C "C5'" . DC A 1 8 ? -12.482 18.379 15.920 1.00 47.93 ? 8 DC A "C5'" 1 ATOM 163 C "C4'" . DC A 1 8 ? -11.417 18.682 16.973 1.00 53.50 ? 8 DC A "C4'" 1 ATOM 164 O "O4'" . DC A 1 8 ? -10.563 19.755 16.541 1.00 56.28 ? 8 DC A "O4'" 1 ATOM 165 C "C3'" . DC A 1 8 ? -12.085 19.186 18.254 1.00 51.69 ? 8 DC A "C3'" 1 ATOM 166 O "O3'" . DC A 1 8 ? -11.196 19.027 19.371 1.00 52.73 ? 8 DC A "O3'" 1 ATOM 167 C "C2'" . DC A 1 8 ? -12.273 20.654 17.893 1.00 52.39 ? 8 DC A "C2'" 1 ATOM 168 C "C1'" . DC A 1 8 ? -10.988 20.991 17.160 1.00 50.55 ? 8 DC A "C1'" 1 ATOM 169 N N1 . DC A 1 8 ? -11.059 22.102 16.171 1.00 45.70 ? 8 DC A N1 1 ATOM 170 C C2 . DC A 1 8 ? -10.716 23.384 16.579 1.00 40.47 ? 8 DC A C2 1 ATOM 171 O O2 . DC A 1 8 ? -10.441 23.657 17.746 1.00 40.68 ? 8 DC A O2 1 ATOM 172 N N3 . DC A 1 8 ? -10.680 24.356 15.640 1.00 39.77 ? 8 DC A N3 1 ATOM 173 C C4 . DC A 1 8 ? -10.984 24.125 14.364 1.00 42.18 ? 8 DC A C4 1 ATOM 174 N N4 . DC A 1 8 ? -10.883 25.127 13.485 1.00 39.09 ? 8 DC A N4 1 ATOM 175 C C5 . DC A 1 8 ? -11.372 22.819 13.934 1.00 42.45 ? 8 DC A C5 1 ATOM 176 C C6 . DC A 1 8 ? -11.377 21.847 14.868 1.00 41.41 ? 8 DC A C6 1 ATOM 177 H "HO3'" . DC A 1 8 ? -10.327 19.314 19.078 0.00 7.69 ? 8 DC A "HO3'" 1 ATOM 178 H H41 . DC A 1 8 ? -10.576 26.043 13.776 0.00 0.15 ? 8 DC A H41 1 ATOM 179 H H42 . DC A 1 8 ? -11.164 24.992 12.522 0.00 1.33 ? 8 DC A H42 1 ATOM 180 O "O5'" . DG B 1 1 ? -9.246 35.772 18.384 1.00 58.17 ? 9 DG B "O5'" 1 ATOM 181 C "C5'" . DG B 1 1 ? -8.120 34.897 18.462 1.00 55.44 ? 9 DG B "C5'" 1 ATOM 182 C "C4'" . DG B 1 1 ? -8.420 33.638 19.277 1.00 51.08 ? 9 DG B "C4'" 1 ATOM 183 O "O4'" . DG B 1 1 ? -9.539 32.907 18.747 1.00 43.84 ? 9 DG B "O4'" 1 ATOM 184 C "C3'" . DG B 1 1 ? -7.232 32.682 19.239 1.00 54.07 ? 9 DG B "C3'" 1 ATOM 185 O "O3'" . DG B 1 1 ? -6.171 33.053 20.153 1.00 57.51 ? 9 DG B "O3'" 1 ATOM 186 C "C2'" . DG B 1 1 ? -7.924 31.371 19.538 1.00 44.48 ? 9 DG B "C2'" 1 ATOM 187 C "C1'" . DG B 1 1 ? -9.292 31.496 18.887 1.00 41.16 ? 9 DG B "C1'" 1 ATOM 188 N N9 . DG B 1 1 ? -9.421 30.823 17.572 1.00 31.65 ? 9 DG B N9 1 ATOM 189 C C8 . DG B 1 1 ? -9.432 31.392 16.324 1.00 23.88 ? 9 DG B C8 1 ATOM 190 N N7 . DG B 1 1 ? -9.641 30.548 15.356 1.00 29.85 ? 9 DG B N7 1 ATOM 191 C C5 . DG B 1 1 ? -9.722 29.317 15.995 1.00 27.17 ? 9 DG B C5 1 ATOM 192 C C6 . DG B 1 1 ? -9.969 28.030 15.449 1.00 28.52 ? 9 DG B C6 1 ATOM 193 O O6 . DG B 1 1 ? -10.174 27.718 14.277 1.00 36.90 ? 9 DG B O6 1 ATOM 194 N N1 . DG B 1 1 ? -9.993 27.061 16.431 1.00 26.77 ? 9 DG B N1 1 ATOM 195 C C2 . DG B 1 1 ? -9.823 27.292 17.778 1.00 26.71 ? 9 DG B C2 1 ATOM 196 N N2 . DG B 1 1 ? -9.846 26.240 18.594 1.00 21.95 ? 9 DG B N2 1 ATOM 197 N N3 . DG B 1 1 ? -9.655 28.509 18.301 1.00 28.39 ? 9 DG B N3 1 ATOM 198 C C4 . DG B 1 1 ? -9.619 29.476 17.354 1.00 26.84 ? 9 DG B C4 1 ATOM 199 H H1 . DG B 1 1 ? -10.136 26.109 16.131 0.00 1.92 ? 9 DG B H1 1 ATOM 200 H H21 . DG B 1 1 ? -10.005 25.306 18.247 0.00 2.75 ? 9 DG B H21 1 ATOM 201 H H22 . DG B 1 1 ? -9.679 26.381 19.583 0.00 -1.79 ? 9 DG B H22 1 ATOM 202 H "HO5'" . DG B 1 1 ? -8.948 36.588 17.981 0.00 3.96 ? 9 DG B "HO5'" 1 ATOM 203 P P . DA B 1 2 ? -6.217 33.114 21.781 1.00 66.70 ? 10 DA B P 1 ATOM 204 O OP1 . DA B 1 2 ? -7.503 33.698 22.224 1.00 68.35 ? 10 DA B OP1 1 ATOM 205 O OP2 . DA B 1 2 ? -4.952 33.741 22.228 1.00 67.39 ? 10 DA B OP2 1 ATOM 206 O "O5'" . DA B 1 2 ? -6.199 31.572 22.242 1.00 65.67 ? 10 DA B "O5'" 1 ATOM 207 C "C5'" . DA B 1 2 ? -5.007 30.787 22.146 1.00 54.37 ? 10 DA B "C5'" 1 ATOM 208 C "C4'" . DA B 1 2 ? -5.230 29.350 22.612 1.00 50.57 ? 10 DA B "C4'" 1 ATOM 209 O "O4'" . DA B 1 2 ? -6.095 28.681 21.675 1.00 49.27 ? 10 DA B "O4'" 1 ATOM 210 C "C3'" . DA B 1 2 ? -3.912 28.579 22.645 1.00 48.51 ? 10 DA B "C3'" 1 ATOM 211 O "O3'" . DA B 1 2 ? -3.802 27.628 23.737 1.00 51.40 ? 10 DA B "O3'" 1 ATOM 212 C "C2'" . DA B 1 2 ? -3.883 27.977 21.250 1.00 54.22 ? 10 DA B "C2'" 1 ATOM 213 C "C1'" . DA B 1 2 ? -5.346 27.720 20.904 1.00 47.66 ? 10 DA B "C1'" 1 ATOM 214 N N9 . DA B 1 2 ? -5.612 27.845 19.456 1.00 44.22 ? 10 DA B N9 1 ATOM 215 C C8 . DA B 1 2 ? -5.516 28.954 18.654 1.00 39.18 ? 10 DA B C8 1 ATOM 216 N N7 . DA B 1 2 ? -5.812 28.734 17.404 1.00 36.01 ? 10 DA B N7 1 ATOM 217 C C5 . DA B 1 2 ? -6.166 27.393 17.384 1.00 28.45 ? 10 DA B C5 1 ATOM 218 C C6 . DA B 1 2 ? -6.612 26.561 16.353 1.00 19.89 ? 10 DA B C6 1 ATOM 219 N N6 . DA B 1 2 ? -6.767 27.005 15.109 1.00 17.15 ? 10 DA B N6 1 ATOM 220 N N1 . DA B 1 2 ? -6.813 25.273 16.636 1.00 15.21 ? 10 DA B N1 1 ATOM 221 C C2 . DA B 1 2 ? -6.662 24.860 17.892 1.00 23.04 ? 10 DA B C2 1 ATOM 222 N N3 . DA B 1 2 ? -6.320 25.556 18.966 1.00 27.18 ? 10 DA B N3 1 ATOM 223 C C4 . DA B 1 2 ? -6.055 26.839 18.628 1.00 32.80 ? 10 DA B C4 1 ATOM 224 H H61 . DA B 1 2 ? -7.102 26.405 14.373 0.00 0.42 ? 10 DA B H61 1 ATOM 225 H H62 . DA B 1 2 ? -6.555 27.974 14.908 0.00 -2.82 ? 10 DA B H62 1 ATOM 226 P P . DA B 1 3 ? -4.621 26.262 24.081 1.00 47.16 ? 11 DA B P 1 ATOM 227 O OP1 . DA B 1 3 ? -6.072 26.460 23.868 1.00 44.70 ? 11 DA B OP1 1 ATOM 228 O OP2 . DA B 1 3 ? -4.143 25.779 25.395 1.00 37.30 ? 11 DA B OP2 1 ATOM 229 O "O5'" . DA B 1 3 ? -4.065 25.269 22.955 1.00 42.47 ? 11 DA B "O5'" 1 ATOM 230 C "C5'" . DA B 1 3 ? -4.413 23.885 22.864 1.00 40.94 ? 11 DA B "C5'" 1 ATOM 231 C "C4'" . DA B 1 3 ? -3.622 23.216 21.742 1.00 41.84 ? 11 DA B "C4'" 1 ATOM 232 O "O4'" . DA B 1 3 ? -3.957 23.783 20.466 1.00 45.53 ? 11 DA B "O4'" 1 ATOM 233 C "C3'" . DA B 1 3 ? -2.124 23.449 22.008 1.00 42.32 ? 11 DA B "C3'" 1 ATOM 234 O "O3'" . DA B 1 3 ? -1.465 22.227 22.416 1.00 43.11 ? 11 DA B "O3'" 1 ATOM 235 C "C2'" . DA B 1 3 ? -1.690 23.989 20.654 1.00 44.59 ? 11 DA B "C2'" 1 ATOM 236 C "C1'" . DA B 1 3 ? -2.791 23.620 19.662 1.00 39.89 ? 11 DA B "C1'" 1 ATOM 237 N N9 . DA B 1 3 ? -2.839 24.483 18.451 1.00 34.24 ? 11 DA B N9 1 ATOM 238 C C8 . DA B 1 3 ? -2.580 25.827 18.342 1.00 33.21 ? 11 DA B C8 1 ATOM 239 N N7 . DA B 1 3 ? -2.709 26.300 17.132 1.00 32.65 ? 11 DA B N7 1 ATOM 240 C C5 . DA B 1 3 ? -3.074 25.194 16.378 1.00 28.54 ? 11 DA B C5 1 ATOM 241 C C6 . DA B 1 3 ? -3.353 25.035 15.010 1.00 23.46 ? 11 DA B C6 1 ATOM 242 N N6 . DA B 1 3 ? -3.282 26.037 14.137 1.00 29.72 ? 11 DA B N6 1 ATOM 243 N N1 . DA B 1 3 ? -3.690 23.816 14.582 1.00 18.35 ? 11 DA B N1 1 ATOM 244 C C2 . DA B 1 3 ? -3.752 22.827 15.457 1.00 16.75 ? 11 DA B C2 1 ATOM 245 N N3 . DA B 1 3 ? -3.492 22.833 16.758 1.00 16.99 ? 11 DA B N3 1 ATOM 246 C C4 . DA B 1 3 ? -3.159 24.079 17.168 1.00 26.12 ? 11 DA B C4 1 ATOM 247 H H61 . DA B 1 3 ? -3.502 25.907 13.162 0.00 -0.56 ? 11 DA B H61 1 ATOM 248 H H62 . DA B 1 3 ? -2.990 26.946 14.473 0.00 7.10 ? 11 DA B H62 1 ATOM 249 P P . DG B 1 4 ? -0.196 22.213 23.441 1.00 39.86 ? 12 DG B P 1 ATOM 250 O OP1 . DG B 1 4 ? 0.049 20.788 23.761 1.00 46.03 ? 12 DG B OP1 1 ATOM 251 O OP2 . DG B 1 4 ? -0.538 23.127 24.556 1.00 38.44 ? 12 DG B OP2 1 ATOM 252 O "O5'" . DG B 1 4 ? 1.180 22.782 22.790 1.00 50.06 ? 12 DG B "O5'" 1 ATOM 253 C "C5'" . DG B 1 4 ? 2.120 22.064 21.965 1.00 47.81 ? 12 DG B "C5'" 1 ATOM 254 C "C4'" . DG B 1 4 ? 1.537 21.544 20.670 1.00 47.79 ? 12 DG B "C4'" 1 ATOM 255 O "O4'" . DG B 1 4 ? 0.978 22.650 19.974 1.00 48.32 ? 12 DG B "O4'" 1 ATOM 256 C "C3'" . DG B 1 4 ? 2.533 20.972 19.660 1.00 53.07 ? 12 DG B "C3'" 1 ATOM 257 O "O3'" . DG B 1 4 ? 2.806 19.571 19.807 1.00 57.71 ? 12 DG B "O3'" 1 ATOM 258 C "C2'" . DG B 1 4 ? 1.832 21.214 18.349 1.00 48.82 ? 12 DG B "C2'" 1 ATOM 259 C "C1'" . DG B 1 4 ? 0.765 22.234 18.619 1.00 47.15 ? 12 DG B "C1'" 1 ATOM 260 N N9 . DG B 1 4 ? 0.734 23.402 17.710 1.00 44.56 ? 12 DG B N9 1 ATOM 261 C C8 . DG B 1 4 ? 0.817 24.719 18.070 1.00 38.26 ? 12 DG B C8 1 ATOM 262 N N7 . DG B 1 4 ? 0.586 25.549 17.103 1.00 29.53 ? 12 DG B N7 1 ATOM 263 C C5 . DG B 1 4 ? 0.538 24.737 15.981 1.00 38.62 ? 12 DG B C5 1 ATOM 264 C C6 . DG B 1 4 ? 0.347 25.108 14.628 1.00 34.00 ? 12 DG B C6 1 ATOM 265 O O6 . DG B 1 4 ? 0.205 26.237 14.160 1.00 30.01 ? 12 DG B O6 1 ATOM 266 N N1 . DG B 1 4 ? 0.209 24.004 13.821 1.00 28.39 ? 12 DG B N1 1 ATOM 267 C C2 . DG B 1 4 ? 0.333 22.700 14.236 1.00 33.31 ? 12 DG B C2 1 ATOM 268 N N2 . DG B 1 4 ? 0.079 21.769 13.327 1.00 20.48 ? 12 DG B N2 1 ATOM 269 N N3 . DG B 1 4 ? 0.593 22.328 15.494 1.00 40.89 ? 12 DG B N3 1 ATOM 270 C C4 . DG B 1 4 ? 0.592 23.408 16.332 1.00 41.82 ? 12 DG B C4 1 ATOM 271 H H1 . DG B 1 4 ? 0.014 24.171 12.845 0.00 0.46 ? 12 DG B H1 1 ATOM 272 H H21 . DG B 1 4 ? -0.018 22.021 12.350 0.00 -1.42 ? 12 DG B H21 1 ATOM 273 H H22 . DG B 1 4 ? -0.055 20.812 13.607 0.00 2.61 ? 12 DG B H22 1 ATOM 274 P P . DC B 1 5 ? 3.896 18.802 20.721 1.00 50.58 ? 13 DC B P 1 ATOM 275 O OP1 . DC B 1 5 ? 3.478 17.381 20.756 1.00 52.89 ? 13 DC B OP1 1 ATOM 276 O OP2 . DC B 1 5 ? 4.071 19.534 21.997 1.00 53.54 ? 13 DC B OP2 1 ATOM 277 O "O5'" . DC B 1 5 ? 5.294 18.858 19.899 1.00 50.43 ? 13 DC B "O5'" 1 ATOM 278 C "C5'" . DC B 1 5 ? 6.219 19.948 19.760 1.00 46.78 ? 13 DC B "C5'" 1 ATOM 279 C "C4'" . DC B 1 5 ? 7.308 19.594 18.725 1.00 44.05 ? 13 DC B "C4'" 1 ATOM 280 O "O4'" . DC B 1 5 ? 7.063 20.419 17.563 1.00 37.21 ? 13 DC B "O4'" 1 ATOM 281 C "C3'" . DC B 1 5 ? 8.767 19.842 19.176 1.00 44.36 ? 13 DC B "C3'" 1 ATOM 282 O "O3'" . DC B 1 5 ? 9.737 19.020 18.462 1.00 56.56 ? 13 DC B "O3'" 1 ATOM 283 C "C2'" . DC B 1 5 ? 8.896 21.268 18.701 1.00 40.28 ? 13 DC B "C2'" 1 ATOM 284 C "C1'" . DC B 1 5 ? 8.225 21.227 17.333 1.00 36.45 ? 13 DC B "C1'" 1 ATOM 285 N N1 . DC B 1 5 ? 8.001 22.565 16.701 1.00 38.14 ? 13 DC B N1 1 ATOM 286 C C2 . DC B 1 5 ? 7.769 22.627 15.327 1.00 32.34 ? 13 DC B C2 1 ATOM 287 O O2 . DC B 1 5 ? 7.677 21.629 14.617 1.00 29.72 ? 13 DC B O2 1 ATOM 288 N N3 . DC B 1 5 ? 7.625 23.847 14.762 1.00 33.38 ? 13 DC B N3 1 ATOM 289 C C4 . DC B 1 5 ? 7.689 24.971 15.474 1.00 38.77 ? 13 DC B C4 1 ATOM 290 N N4 . DC B 1 5 ? 7.533 26.137 14.848 1.00 41.50 ? 13 DC B N4 1 ATOM 291 C C5 . DC B 1 5 ? 7.908 24.931 16.888 1.00 39.41 ? 13 DC B C5 1 ATOM 292 C C6 . DC B 1 5 ? 8.064 23.713 17.447 1.00 41.48 ? 13 DC B C6 1 ATOM 293 H H41 . DC B 1 5 ? 7.352 26.171 13.856 0.00 2.42 ? 13 DC B H41 1 ATOM 294 H H42 . DC B 1 5 ? 7.585 27.003 15.369 0.00 3.07 ? 13 DC B H42 1 ATOM 295 P P . DT B 1 6 ? 11.308 18.991 18.893 1.00 58.44 ? 14 DT B P 1 ATOM 296 O OP1 . DT B 1 6 ? 11.367 18.512 20.289 1.00 51.99 ? 14 DT B OP1 1 ATOM 297 O OP2 . DT B 1 6 ? 11.896 20.318 18.578 1.00 54.05 ? 14 DT B OP2 1 ATOM 298 O "O5'" . DT B 1 6 ? 12.105 17.869 18.028 1.00 42.61 ? 14 DT B "O5'" 1 ATOM 299 C "C5'" . DT B 1 6 ? 12.693 18.001 16.728 1.00 30.75 ? 14 DT B "C5'" 1 ATOM 300 C "C4'" . DT B 1 6 ? 11.749 18.425 15.630 1.00 32.68 ? 14 DT B "C4'" 1 ATOM 301 O "O4'" . DT B 1 6 ? 11.210 19.711 15.918 1.00 38.83 ? 14 DT B "O4'" 1 ATOM 302 C "C3'" . DT B 1 6 ? 12.510 18.598 14.331 1.00 37.70 ? 14 DT B "C3'" 1 ATOM 303 O "O3'" . DT B 1 6 ? 12.657 17.324 13.688 1.00 38.71 ? 14 DT B "O3'" 1 ATOM 304 C "C2'" . DT B 1 6 ? 11.721 19.644 13.598 1.00 37.98 ? 14 DT B "C2'" 1 ATOM 305 C "C1'" . DT B 1 6 ? 10.956 20.391 14.674 1.00 40.71 ? 14 DT B "C1'" 1 ATOM 306 N N1 . DT B 1 6 ? 11.160 21.867 14.775 1.00 25.51 ? 14 DT B N1 1 ATOM 307 C C2 . DT B 1 6 ? 10.954 22.681 13.663 1.00 18.62 ? 14 DT B C2 1 ATOM 308 O O2 . DT B 1 6 ? 10.731 22.289 12.518 1.00 9.02 ? 14 DT B O2 1 ATOM 309 N N3 . DT B 1 6 ? 10.999 24.034 13.889 1.00 20.22 ? 14 DT B N3 1 ATOM 310 C C4 . DT B 1 6 ? 11.268 24.651 15.087 1.00 30.05 ? 14 DT B C4 1 ATOM 311 O O4 . DT B 1 6 ? 11.247 25.880 15.139 1.00 29.86 ? 14 DT B O4 1 ATOM 312 C C5 . DT B 1 6 ? 11.531 23.742 16.178 1.00 24.87 ? 14 DT B C5 1 ATOM 313 C C7 . DT B 1 6 ? 11.969 24.270 17.541 1.00 25.09 ? 14 DT B C7 1 ATOM 314 C C6 . DT B 1 6 ? 11.439 22.418 15.998 1.00 12.57 ? 14 DT B C6 1 ATOM 315 H H3 . DT B 1 6 ? 10.824 24.629 13.091 0.00 -3.45 ? 14 DT B H3 1 ATOM 316 P P . DT B 1 7 ? 13.187 17.110 12.183 1.00 34.95 ? 15 DT B P 1 ATOM 317 O OP1 . DT B 1 7 ? 12.268 17.818 11.262 1.00 45.65 ? 15 DT B OP1 1 ATOM 318 O OP2 . DT B 1 7 ? 13.425 15.659 12.007 1.00 38.56 ? 15 DT B OP2 1 ATOM 319 O "O5'" . DT B 1 7 ? 14.627 17.831 12.251 1.00 39.05 ? 15 DT B "O5'" 1 ATOM 320 C "C5'" . DT B 1 7 ? 15.579 17.802 11.181 1.00 35.63 ? 15 DT B "C5'" 1 ATOM 321 C "C4'" . DT B 1 7 ? 15.031 18.350 9.857 1.00 35.33 ? 15 DT B "C4'" 1 ATOM 322 O "O4'" . DT B 1 7 ? 14.203 19.501 10.100 1.00 35.29 ? 15 DT B "O4'" 1 ATOM 323 C "C3'" . DT B 1 7 ? 16.177 18.805 8.971 1.00 41.44 ? 15 DT B "C3'" 1 ATOM 324 O "O3'" . DT B 1 7 ? 15.763 18.877 7.595 1.00 48.17 ? 15 DT B "O3'" 1 ATOM 325 C "C2'" . DT B 1 7 ? 16.352 20.199 9.563 1.00 38.74 ? 15 DT B "C2'" 1 ATOM 326 C "C1'" . DT B 1 7 ? 14.933 20.705 9.806 1.00 35.71 ? 15 DT B "C1'" 1 ATOM 327 N N1 . DT B 1 7 ? 14.833 21.657 10.945 1.00 36.68 ? 15 DT B N1 1 ATOM 328 C C2 . DT B 1 7 ? 14.608 23.009 10.689 1.00 34.03 ? 15 DT B C2 1 ATOM 329 O O2 . DT B 1 7 ? 14.496 23.498 9.567 1.00 38.93 ? 15 DT B O2 1 ATOM 330 N N3 . DT B 1 7 ? 14.500 23.836 11.794 1.00 27.38 ? 15 DT B N3 1 ATOM 331 C C4 . DT B 1 7 ? 14.596 23.427 13.110 1.00 28.75 ? 15 DT B C4 1 ATOM 332 O O4 . DT B 1 7 ? 14.484 24.249 14.018 1.00 22.67 ? 15 DT B O4 1 ATOM 333 C C5 . DT B 1 7 ? 14.841 22.016 13.286 1.00 32.53 ? 15 DT B C5 1 ATOM 334 C C7 . DT B 1 7 ? 15.092 21.456 14.684 1.00 34.03 ? 15 DT B C7 1 ATOM 335 C C6 . DT B 1 7 ? 14.939 21.198 12.229 1.00 37.72 ? 15 DT B C6 1 ATOM 336 H H3 . DT B 1 7 ? 14.338 24.814 11.603 0.00 0.03 ? 15 DT B H3 1 ATOM 337 P P . DC B 1 8 ? 16.837 19.109 6.419 1.00 47.22 ? 16 DC B P 1 ATOM 338 O OP1 . DC B 1 8 ? 16.116 19.038 5.127 1.00 37.69 ? 16 DC B OP1 1 ATOM 339 O OP2 . DC B 1 8 ? 17.977 18.199 6.661 1.00 47.07 ? 16 DC B OP2 1 ATOM 340 O "O5'" . DC B 1 8 ? 17.356 20.623 6.615 1.00 43.51 ? 16 DC B "O5'" 1 ATOM 341 C "C5'" . DC B 1 8 ? 16.597 21.765 6.193 1.00 41.32 ? 16 DC B "C5'" 1 ATOM 342 C "C4'" . DC B 1 8 ? 17.165 23.071 6.738 1.00 32.67 ? 16 DC B "C4'" 1 ATOM 343 O "O4'" . DC B 1 8 ? 17.014 23.120 8.155 1.00 30.72 ? 16 DC B "O4'" 1 ATOM 344 C "C3'" . DC B 1 8 ? 18.664 23.257 6.499 1.00 31.47 ? 16 DC B "C3'" 1 ATOM 345 O "O3'" . DC B 1 8 ? 18.909 23.930 5.257 1.00 29.26 ? 16 DC B "O3'" 1 ATOM 346 C "C2'" . DC B 1 8 ? 19.103 24.056 7.722 1.00 24.83 ? 16 DC B "C2'" 1 ATOM 347 C "C1'" . DC B 1 8 ? 17.837 24.221 8.552 1.00 29.88 ? 16 DC B "C1'" 1 ATOM 348 N N1 . DC B 1 8 ? 18.004 24.258 10.032 1.00 28.61 ? 16 DC B N1 1 ATOM 349 C C2 . DC B 1 8 ? 17.786 25.465 10.682 1.00 20.05 ? 16 DC B C2 1 ATOM 350 O O2 . DC B 1 8 ? 17.526 26.503 10.074 1.00 19.43 ? 16 DC B O2 1 ATOM 351 N N3 . DC B 1 8 ? 17.866 25.485 12.030 1.00 14.19 ? 16 DC B N3 1 ATOM 352 C C4 . DC B 1 8 ? 18.163 24.397 12.737 1.00 22.77 ? 16 DC B C4 1 ATOM 353 N N4 . DC B 1 8 ? 18.224 24.502 14.066 1.00 22.65 ? 16 DC B N4 1 ATOM 354 C C5 . DC B 1 8 ? 18.411 23.145 12.086 1.00 27.17 ? 16 DC B C5 1 ATOM 355 C C6 . DC B 1 8 ? 18.309 23.127 10.739 1.00 29.26 ? 16 DC B C6 1 ATOM 356 H "HO3'" . DC B 1 8 ? 18.594 23.347 4.562 0.00 -0.18 ? 16 DC B "HO3'" 1 ATOM 357 H H41 . DC B 1 8 ? 18.046 25.383 14.526 0.00 -2.12 ? 16 DC B H41 1 ATOM 358 H H42 . DC B 1 8 ? 18.465 23.696 14.627 0.00 -3.03 ? 16 DC B H42 1 ATOM 359 N N . THR C 2 1 ? 4.022 21.373 9.995 1.00 28.75 ? 1 THR C N 1 ATOM 360 C CA . THR C 2 1 ? 3.807 19.985 9.582 1.00 29.48 ? 1 THR C CA 1 ATOM 361 C C . THR C 2 1 ? 4.771 19.056 10.274 1.00 36.33 ? 1 THR C C 1 ATOM 362 O O . THR C 2 1 ? 5.860 19.467 10.665 1.00 34.94 ? 1 THR C O 1 ATOM 363 C CB . THR C 2 1 ? 3.959 19.739 8.072 1.00 29.73 ? 1 THR C CB 1 ATOM 364 O OG1 . THR C 2 1 ? 5.220 20.318 7.679 1.00 34.21 ? 1 THR C OG1 1 ATOM 365 C CG2 . THR C 2 1 ? 2.855 20.363 7.238 1.00 37.51 ? 1 THR C CG2 1 ATOM 366 H H . THR C 2 1 ? 4.647 21.406 10.755 0.00 1.14 ? 1 THR C H 1 HETATM 367 N N . DVA C 2 2 ? 4.342 17.807 10.449 1.00 44.85 ? 2 DVA C N 1 HETATM 368 C CA . DVA C 2 2 ? 5.248 16.740 10.844 1.00 41.03 ? 2 DVA C CA 1 HETATM 369 C CB . DVA C 2 2 ? 4.804 15.408 10.189 1.00 51.07 ? 2 DVA C CB 1 HETATM 370 C CG1 . DVA C 2 2 ? 5.755 14.251 10.466 1.00 53.60 ? 2 DVA C CG1 1 HETATM 371 C CG2 . DVA C 2 2 ? 4.588 15.535 8.684 1.00 51.47 ? 2 DVA C CG2 1 HETATM 372 C C . DVA C 2 2 ? 5.354 16.631 12.366 1.00 34.73 ? 2 DVA C C 1 HETATM 373 O O . DVA C 2 2 ? 4.374 16.215 12.989 1.00 35.69 ? 2 DVA C O 1 HETATM 374 H H . DVA C 2 2 ? 3.397 17.599 10.322 0.00 -3.21 ? 2 DVA C H 1 ATOM 375 N N . PRO C 2 3 ? 6.449 17.008 13.045 1.00 34.65 ? 3 PRO C N 1 ATOM 376 C CA . PRO C 2 3 ? 7.661 17.599 12.471 1.00 37.94 ? 3 PRO C CA 1 ATOM 377 C C . PRO C 2 3 ? 8.519 16.632 11.653 1.00 38.45 ? 3 PRO C C 1 ATOM 378 O O . PRO C 2 3 ? 8.637 15.472 12.055 1.00 42.61 ? 3 PRO C O 1 ATOM 379 C CB . PRO C 2 3 ? 8.414 18.048 13.702 1.00 29.99 ? 3 PRO C CB 1 ATOM 380 C CG . PRO C 2 3 ? 7.378 18.182 14.779 1.00 34.51 ? 3 PRO C CG 1 ATOM 381 C CD . PRO C 2 3 ? 6.555 16.949 14.497 1.00 35.14 ? 3 PRO C CD 1 HETATM 382 N N . SAR C 2 4 ? 9.140 17.045 10.533 1.00 34.28 ? 4 SAR C N 1 HETATM 383 C CA . SAR C 2 4 ? 9.112 18.394 9.983 1.00 34.55 ? 4 SAR C CA 1 HETATM 384 C C . SAR C 2 4 ? 8.205 18.558 8.763 1.00 42.07 ? 4 SAR C C 1 HETATM 385 O O . SAR C 2 4 ? 7.395 17.663 8.509 1.00 49.04 ? 4 SAR C O 1 HETATM 386 C CN . SAR C 2 4 ? 9.945 16.092 9.777 1.00 27.60 ? 4 SAR C CN 1 HETATM 387 N N . MVA C 2 5 ? 8.268 19.654 7.982 1.00 41.41 ? 5 MVA C N 1 HETATM 388 C CN . MVA C 2 5 ? 9.081 20.784 8.414 1.00 46.25 ? 5 MVA C CN 1 HETATM 389 C CA . MVA C 2 5 ? 7.509 19.926 6.762 1.00 35.08 ? 5 MVA C CA 1 HETATM 390 C CB . MVA C 2 5 ? 8.302 19.390 5.518 1.00 24.16 ? 5 MVA C CB 1 HETATM 391 C CG1 . MVA C 2 5 ? 8.299 17.871 5.340 1.00 26.44 ? 5 MVA C CG1 1 HETATM 392 C CG2 . MVA C 2 5 ? 7.898 20.129 4.248 1.00 13.25 ? 5 MVA C CG2 1 HETATM 393 C C . MVA C 2 5 ? 6.011 19.579 6.808 1.00 38.77 ? 5 MVA C C 1 HETATM 394 O O . MVA C 2 5 ? 5.462 18.950 5.898 1.00 49.27 ? 5 MVA C O 1 HETATM 395 C C1 . PXF C 2 6 ? 3.002 23.495 10.495 1.00 19.18 ? 6 PXF C C1 1 HETATM 396 C C0 . PXF C 2 6 ? 2.944 22.089 10.322 1.00 29.27 ? 6 PXF C C0 1 HETATM 397 O O1 . PXF C 2 6 ? 1.876 21.509 10.513 1.00 43.62 ? 6 PXF C O1 1 HETATM 398 C C2 . PXF C 2 6 ? 2.766 24.430 9.440 1.00 20.52 ? 6 PXF C C2 1 HETATM 399 N N2 . PXF C 2 6 ? 2.473 24.053 8.191 1.00 31.34 ? 6 PXF C N2 1 HETATM 400 C C3 . PXF C 2 6 ? 2.837 25.824 9.701 1.00 18.26 ? 6 PXF C C3 1 HETATM 401 O O3 . PXF C 2 6 ? 2.630 26.620 8.777 1.00 19.24 ? 6 PXF C O3 1 HETATM 402 C C4 . PXF C 2 6 ? 3.135 26.305 11.003 1.00 16.69 ? 6 PXF C C4 1 HETATM 403 O O5 . PXF C 2 6 ? 3.645 25.801 13.305 1.00 17.97 ? 6 PXF C O5 1 HETATM 404 C C6 . PXF C 2 6 ? 4.157 25.345 15.621 1.00 24.16 ? 6 PXF C C6 1 HETATM 405 C C7 . PXF C 2 6 ? 4.376 24.384 16.631 1.00 20.55 ? 6 PXF C C7 1 HETATM 406 C C8 . PXF C 2 6 ? 4.302 23.003 16.344 1.00 23.49 ? 6 PXF C C8 1 HETATM 407 F F8 . PXF C 2 6 ? 4.528 22.137 17.350 1.00 23.49 ? 6 PXF C F8 1 HETATM 408 C C9 . PXF C 2 6 ? 4.000 22.559 15.030 1.00 28.76 ? 6 PXF C C9 1 HETATM 409 C "C0'" . PXF C 2 6 ? 3.913 21.188 14.694 1.00 38.08 ? 6 PXF C "C0'" 1 HETATM 410 O "O1'" . PXF C 2 6 ? 4.929 20.615 14.285 1.00 53.00 ? 6 PXF C "O1'" 1 HETATM 411 N N10 . PXF C 2 6 ? 3.508 23.148 12.784 1.00 11.63 ? 6 PXF C N10 1 HETATM 412 C C11 . PXF C 2 6 ? 3.295 23.987 11.790 1.00 15.22 ? 6 PXF C C11 1 HETATM 413 C C12 . PXF C 2 6 ? 3.363 25.385 12.046 1.00 17.45 ? 6 PXF C C12 1 HETATM 414 C C13 . PXF C 2 6 ? 3.863 24.918 14.308 1.00 22.27 ? 6 PXF C C13 1 HETATM 415 C C14 . PXF C 2 6 ? 3.785 23.527 14.016 1.00 21.19 ? 6 PXF C C14 1 HETATM 416 C C15 . PXF C 2 6 ? 3.207 27.801 11.285 1.00 15.08 ? 6 PXF C C15 1 HETATM 417 C C16 . PXF C 2 6 ? 4.241 26.825 15.962 1.00 18.65 ? 6 PXF C C16 1 HETATM 418 H HN21 . PXF C 2 6 ? 2.314 24.760 7.480 0.00 0.13 ? 6 PXF C HN21 1 HETATM 419 H HN22 . PXF C 2 6 ? 2.403 23.077 7.942 0.00 -0.69 ? 6 PXF C HN22 1 ATOM 420 N N . THR C 2 7 ? 2.740 20.530 14.776 1.00 42.34 ? 7 THR C N 1 ATOM 421 C CA . THR C 2 7 ? 2.785 19.069 14.622 1.00 46.50 ? 7 THR C CA 1 ATOM 422 C C . THR C 2 7 ? 1.624 18.520 13.820 1.00 42.04 ? 7 THR C C 1 ATOM 423 O O . THR C 2 7 ? 0.538 19.092 13.819 1.00 36.98 ? 7 THR C O 1 ATOM 424 C CB . THR C 2 7 ? 2.824 18.265 15.946 1.00 47.70 ? 7 THR C CB 1 ATOM 425 O OG1 . THR C 2 7 ? 1.679 18.653 16.720 1.00 48.30 ? 7 THR C OG1 1 ATOM 426 C CG2 . THR C 2 7 ? 4.046 18.482 16.818 1.00 42.77 ? 7 THR C CG2 1 ATOM 427 H H . THR C 2 7 ? 2.077 20.935 14.178 0.00 1.50 ? 7 THR C H 1 HETATM 428 N N . DVA C 2 8 ? 1.830 17.388 13.154 1.00 33.77 ? 8 DVA C N 1 HETATM 429 C CA . DVA C 2 8 ? 0.761 16.702 12.448 1.00 39.54 ? 8 DVA C CA 1 HETATM 430 C CB . DVA C 2 8 ? 1.043 15.180 12.411 1.00 37.91 ? 8 DVA C CB 1 HETATM 431 C CG1 . DVA C 2 8 ? -0.047 14.379 11.713 1.00 34.46 ? 8 DVA C CG1 1 HETATM 432 C CG2 . DVA C 2 8 ? 1.288 14.594 13.793 1.00 42.02 ? 8 DVA C CG2 1 HETATM 433 C C . DVA C 2 8 ? 0.668 17.300 11.047 1.00 43.35 ? 8 DVA C C 1 HETATM 434 O O . DVA C 2 8 ? 1.616 17.115 10.276 1.00 48.88 ? 8 DVA C O 1 HETATM 435 H H . DVA C 2 8 ? 2.728 17.010 13.117 0.00 5.08 ? 8 DVA C H 1 ATOM 436 N N . PRO C 2 9 ? -0.368 18.060 10.664 1.00 44.11 ? 9 PRO C N 1 ATOM 437 C CA . PRO C 2 9 ? -1.523 18.433 11.494 1.00 37.28 ? 9 PRO C CA 1 ATOM 438 C C . PRO C 2 9 ? -2.521 17.328 11.859 1.00 27.92 ? 9 PRO C C 1 ATOM 439 O O . PRO C 2 9 ? -2.692 16.401 11.058 1.00 32.50 ? 9 PRO C O 1 ATOM 440 C CB . PRO C 2 9 ? -2.176 19.508 10.656 1.00 34.81 ? 9 PRO C CB 1 ATOM 441 C CG . PRO C 2 9 ? -1.895 19.088 9.238 1.00 30.90 ? 9 PRO C CG 1 ATOM 442 C CD . PRO C 2 9 ? -0.433 18.723 9.362 1.00 39.19 ? 9 PRO C CD 1 HETATM 443 N N . SAR C 2 10 ? -3.152 17.342 13.046 1.00 23.40 ? 10 SAR C N 1 HETATM 444 C CA . SAR C 2 10 ? -2.929 18.284 14.135 1.00 33.03 ? 10 SAR C CA 1 HETATM 445 C C . SAR C 2 10 ? -1.967 17.765 15.209 1.00 38.97 ? 10 SAR C C 1 HETATM 446 O O . SAR C 2 10 ? -1.561 16.607 15.122 1.00 45.95 ? 10 SAR C O 1 HETATM 447 C CN . SAR C 2 10 ? -4.214 16.375 13.290 1.00 39.25 ? 10 SAR C CN 1 HETATM 448 N N . MVA C 2 11 ? -1.563 18.555 16.226 1.00 44.37 ? 11 MVA C N 1 HETATM 449 C CN . MVA C 2 11 ? -1.761 19.990 16.110 1.00 47.28 ? 11 MVA C CN 1 HETATM 450 C CA . MVA C 2 11 ? -0.699 18.206 17.353 1.00 47.99 ? 11 MVA C CA 1 HETATM 451 C CB . MVA C 2 11 ? -1.393 17.229 18.353 1.00 49.25 ? 11 MVA C CB 1 HETATM 452 C CG1 . MVA C 2 11 ? -0.522 16.991 19.583 1.00 50.89 ? 11 MVA C CG1 1 HETATM 453 C CG2 . MVA C 2 11 ? -2.742 17.752 18.829 1.00 44.90 ? 11 MVA C CG2 1 HETATM 454 C C . MVA C 2 11 ? 0.682 17.708 16.918 1.00 48.61 ? 11 MVA C C 1 HETATM 455 O O . MVA C 2 11 ? 0.885 16.524 16.639 1.00 42.02 ? 11 MVA C O 1 #