0.021829 0.012603 0.000000 0.000000 0.025206 0.000000 0.000000 0.000000 0.020416 0.00000 0.00000 0.00000 Miyazono, K. Nagata, K. Saigo, K. Kojima, T. Tanokura, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 45.810 45.810 48.980 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cd 2 112.411 CADMIUM ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CD N 75 N CL N 76 N N N 77 S C N 78 N C N 79 N O N 80 N C N 81 N C N 82 N C N 83 N O N 84 N N N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N N N 97 S C N 98 N C N 99 N O N 100 N C N 101 N C N 102 N C N 103 N O N 104 N O N 105 N O N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 N C N 117 N C N 118 N O N 119 N O N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C Y 130 N C Y 131 N N Y 132 N C Y 133 N C Y 134 N N N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N O N 147 N H N 148 N H N 149 N N N 150 S C N 151 N C N 152 N O N 153 S C N 154 N C N 155 N C N 156 N C N 157 N O N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N N N 172 S C N 173 N C N 174 N O N 175 N C N 176 N C N 177 N C N 178 N C N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N N N 194 S C N 195 N C N 196 N O N 197 N C N 198 N C N 199 N C N 200 N C N 201 N N N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N N N 219 S C N 220 N C N 221 N O N 222 N C N 223 N C N 224 N S N 225 N C N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C Y 247 N C Y 248 N C N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 N C N 266 N C N 267 N C N 268 N O N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N N N 279 S C N 280 N C N 281 N O N 282 N C N 283 N O N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 R C N 297 N O N 298 N C N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N N N 310 S C N 311 N C N 312 N O N 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N N Y 318 N C Y 319 N C Y 320 N C Y 321 N C Y 322 N C N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C N 347 N O N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N N N 361 S C N 362 N C N 363 N O N 364 N C N 365 N C N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing UK Embo J. EMJODG 0897 0261-4189 29 1613 1623 10.1038/emboj.2010.53 20389279 Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless 2010 10.2210/pdb3a02/pdb pdb_00003a02 100 1 CCD ADSC QUANTUM 210 SINGLE WAVELENGTH M x-ray 1 1.0 AR-NW12A Photon Factory SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A 7301.347 Homeobox protein aristaless Homeobox, residues 91-146 1 man polymer 112.411 CADMIUM ION 1 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 18.015 water 99 nat water no no GSHMTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV GSHMTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Fruit fly sample al, CG3935 7227 Drosophila melanogaster 562 Escherichia coli 1 2.03 39.47 VAPOR DIFFUSION, SITTING DROP 4.8 30% PEG 400, 0.1M Cadmium chloride, 0.1M Acetate, pH 4.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2010-03-09 1 1 2011-07-13 1 2 2023-11-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Aristaless and Clawless homeodomains bound to DNA Hox11L1 homeodomain PDBJ Y PDBJ 2009-02-28 REL REL CD CADMIUM ION CL CHLORIDE ION HOH water 1FJL PDB ENTRY 1FJL PDB experimental model CD 1 2 CD CD 1 A CL 1 3 CL CL 147 A HOH 2 4 HOH HOH 2 A HOH 3 4 HOH HOH 3 A HOH 4 4 HOH HOH 4 A HOH 5 4 HOH HOH 5 A HOH 6 4 HOH HOH 6 A HOH 7 4 HOH HOH 7 A HOH 8 4 HOH HOH 8 A HOH 9 4 HOH HOH 9 A HOH 10 4 HOH HOH 10 A HOH 11 4 HOH HOH 11 A HOH 12 4 HOH HOH 12 A HOH 13 4 HOH HOH 13 A HOH 14 4 HOH HOH 14 A HOH 15 4 HOH HOH 15 A HOH 16 4 HOH HOH 16 A HOH 17 4 HOH HOH 17 A HOH 18 4 HOH HOH 18 A HOH 19 4 HOH HOH 19 A HOH 20 4 HOH HOH 20 A HOH 21 4 HOH HOH 21 A HOH 22 4 HOH HOH 22 A HOH 23 4 HOH HOH 23 A HOH 24 4 HOH HOH 24 A HOH 25 4 HOH HOH 25 A HOH 26 4 HOH HOH 26 A HOH 27 4 HOH HOH 27 A HOH 28 4 HOH HOH 28 A HOH 29 4 HOH HOH 29 A HOH 30 4 HOH HOH 30 A HOH 31 4 HOH HOH 31 A HOH 32 4 HOH HOH 32 A HOH 33 4 HOH HOH 33 A HOH 34 4 HOH HOH 34 A HOH 35 4 HOH HOH 35 A HOH 36 4 HOH HOH 36 A HOH 37 4 HOH HOH 37 A HOH 38 4 HOH HOH 38 A HOH 39 4 HOH HOH 39 A HOH 40 4 HOH HOH 40 A HOH 41 4 HOH HOH 41 A HOH 42 4 HOH HOH 42 A HOH 43 4 HOH HOH 43 A HOH 44 4 HOH HOH 44 A HOH 45 4 HOH HOH 45 A HOH 46 4 HOH HOH 46 A HOH 47 4 HOH HOH 47 A HOH 48 4 HOH HOH 48 A HOH 49 4 HOH HOH 49 A HOH 50 4 HOH HOH 50 A HOH 51 4 HOH HOH 51 A HOH 52 4 HOH HOH 52 A HOH 53 4 HOH HOH 53 A HOH 54 4 HOH HOH 54 A HOH 55 4 HOH HOH 55 A HOH 56 4 HOH HOH 56 A HOH 57 4 HOH HOH 57 A HOH 58 4 HOH HOH 58 A HOH 59 4 HOH HOH 59 A HOH 60 4 HOH HOH 60 A HOH 61 4 HOH HOH 61 A HOH 62 4 HOH HOH 62 A HOH 63 4 HOH HOH 63 A HOH 64 4 HOH HOH 64 A HOH 65 4 HOH HOH 65 A HOH 66 4 HOH HOH 66 A HOH 67 4 HOH HOH 67 A HOH 68 4 HOH HOH 68 A HOH 69 4 HOH HOH 69 A HOH 70 4 HOH HOH 70 A HOH 71 4 HOH HOH 71 A HOH 72 4 HOH HOH 72 A HOH 73 4 HOH HOH 73 A HOH 74 4 HOH HOH 74 A HOH 75 4 HOH HOH 75 A HOH 76 4 HOH HOH 76 A HOH 77 4 HOH HOH 77 A HOH 78 4 HOH HOH 78 A HOH 79 4 HOH HOH 79 A HOH 80 4 HOH HOH 80 A HOH 81 4 HOH HOH 81 A HOH 82 4 HOH HOH 82 A HOH 83 4 HOH HOH 83 A HOH 84 4 HOH HOH 84 A HOH 85 4 HOH HOH 85 A HOH 86 4 HOH HOH 86 A HOH 1 4 HOH HOH 148 A HOH 87 4 HOH HOH 149 A HOH 88 4 HOH HOH 150 A HOH 89 4 HOH HOH 151 A HOH 90 4 HOH HOH 152 A HOH 91 4 HOH HOH 153 A HOH 92 4 HOH HOH 154 A HOH 93 4 HOH HOH 155 A HOH 94 4 HOH HOH 156 A HOH 95 4 HOH HOH 157 A HOH 96 4 HOH HOH 158 A HOH 97 4 HOH HOH 159 A HOH 98 4 HOH HOH 160 A HOH 99 4 HOH HOH 161 A n 1 87 A n 2 88 A n 3 89 A n 4 90 A THR 91 n 5 THR 91 A PHE 92 n 6 PHE 92 A THR 93 n 7 THR 93 A SER 94 n 8 SER 94 A PHE 95 n 9 PHE 95 A GLN 96 n 10 GLN 96 A LEU 97 n 11 LEU 97 A GLU 98 n 12 GLU 98 A GLU 99 n 13 GLU 99 A LEU 100 n 14 LEU 100 A GLU 101 n 15 GLU 101 A LYS 102 n 16 LYS 102 A ALA 103 n 17 ALA 103 A PHE 104 n 18 PHE 104 A SER 105 n 19 SER 105 A ARG 106 n 20 ARG 106 A THR 107 n 21 THR 107 A HIS 108 n 22 HIS 108 A TYR 109 n 23 TYR 109 A PRO 110 n 24 PRO 110 A ASP 111 n 25 ASP 111 A VAL 112 n 26 VAL 112 A PHE 113 n 27 PHE 113 A THR 114 n 28 THR 114 A ARG 115 n 29 ARG 115 A GLU 116 n 30 GLU 116 A GLU 117 n 31 GLU 117 A LEU 118 n 32 LEU 118 A ALA 119 n 33 ALA 119 A MET 120 n 34 MET 120 A LYS 121 n 35 LYS 121 A ILE 122 n 36 ILE 122 A GLY 123 n 37 GLY 123 A LEU 124 n 38 LEU 124 A THR 125 n 39 THR 125 A GLU 126 n 40 GLU 126 A ALA 127 n 41 ALA 127 A ARG 128 n 42 ARG 128 A ILE 129 n 43 ILE 129 A GLN 130 n 44 GLN 130 A VAL 131 n 45 VAL 131 A TRP 132 n 46 TRP 132 A PHE 133 n 47 PHE 133 A GLN 134 n 48 GLN 134 A ASN 135 n 49 ASN 135 A ARG 136 n 50 ARG 136 A ARG 137 n 51 ARG 137 A ALA 138 n 52 ALA 138 A LYS 139 n 53 LYS 139 A TRP 140 n 54 TRP 140 A ARG 141 n 55 ARG 141 A n 56 142 A n 57 143 A n 58 144 A n 59 145 A n 60 146 A 9.1266 1.2876 -1.0491 5.2073 1.5223 12.7429 -0.4326 -0.0940 0.5634 -0.6683 0.3067 0.6483 -0.2748 -0.1840 0.1260 0.0957 -0.0315 -0.0931 0.0291 0.0290 0.1087 refined 30.5430 24.6270 0.3960 X-RAY DIFFRACTION 1.1840 -0.3797 1.0510 0.1460 -0.2644 1.2369 0.0186 0.0237 -0.0116 0.0097 -0.0008 0.0005 0.0262 0.0305 -0.0178 0.0718 -0.0305 -0.0008 0.0352 0.0018 0.0278 refined 32.2180 18.4870 -0.1900 X-RAY DIFFRACTION 2.4728 -1.7870 -0.7584 1.3159 0.3158 2.8900 -0.0025 0.0868 -0.0427 0.0003 -0.0548 0.0214 0.0552 -0.0324 0.0574 0.0385 -0.0184 -0.0068 0.0307 -0.0088 0.0526 refined 30.1430 11.1230 0.0700 X-RAY DIFFRACTION 0.3775 -1.0477 0.5983 4.4731 0.6235 4.3492 0.1611 -0.0478 0.0321 -0.3075 0.0660 -0.2642 0.4257 -0.1239 -0.2271 0.1500 -0.0761 0.0229 0.0563 -0.0193 0.0333 refined 30.0460 6.5890 5.7850 X-RAY DIFFRACTION 5.3223 3.0028 0.2996 4.7716 0.1312 0.2445 0.0086 -0.0893 -0.1366 -0.0420 0.0076 -0.1655 0.0889 -0.0116 -0.0161 0.0417 -0.0151 -0.0066 0.0360 -0.0110 0.0349 refined 36.9960 11.8710 12.0060 X-RAY DIFFRACTION 3.8549 2.8841 -3.9536 10.2672 -5.3216 4.7545 -0.2501 0.1528 0.0287 -0.1796 0.2268 -0.2114 0.2440 -0.1923 0.0232 0.0335 -0.0238 0.0090 0.0528 -0.0064 0.0320 refined 39.5840 17.8510 6.6090 X-RAY DIFFRACTION 1.2998 0.7164 -1.9977 0.7702 -0.6673 3.8482 0.0160 0.0541 0.0434 -0.0114 0.0363 -0.0173 -0.0662 -0.1687 -0.0523 0.0302 -0.0112 -0.0098 0.0572 -0.0005 0.0381 refined 34.4780 21.1950 9.8990 X-RAY DIFFRACTION 1.8748 1.0562 1.1964 1.2540 -0.0417 1.5481 -0.0692 0.0753 0.0038 -0.0097 0.0544 -0.0071 -0.0629 0.0259 0.0148 0.0305 -0.0120 -0.0063 0.0496 -0.0005 0.0337 refined 26.9540 16.0060 9.7480 X-RAY DIFFRACTION 0.3791 -0.6760 0.5639 1.2215 -0.8368 3.1933 0.0244 -0.0098 -0.0234 -0.0384 0.0003 0.0477 0.1452 -0.1207 -0.0247 0.0375 -0.0243 -0.0092 0.0544 -0.0007 0.0330 refined 20.1090 9.7480 5.8670 X-RAY DIFFRACTION A 91 A 95 X-RAY DIFFRACTION 1 A 96 A 100 X-RAY DIFFRACTION 2 A 101 A 105 X-RAY DIFFRACTION 3 A 106 A 110 X-RAY DIFFRACTION 4 A 111 A 116 X-RAY DIFFRACTION 5 A 117 A 121 X-RAY DIFFRACTION 6 A 122 A 127 X-RAY DIFFRACTION 7 A 128 A 135 X-RAY DIFFRACTION 8 A 136 A 141 X-RAY DIFFRACTION 9 author_and_software_defined_assembly PISA 1 monomeric A GLU 126 A OE1 GLU 40 1_555 A CD 1 B CD CD 1_555 A GLU 126 A OE2 GLU 40 1_555 54.6 A GLU 126 A OE1 GLU 40 1_555 A CD 1 B CD CD 1_555 A GLN 130 A OE1 GLN 44 1_555 111.1 A GLU 126 A OE2 GLU 40 1_555 A CD 1 B CD CD 1_555 A GLN 130 A OE1 GLN 44 1_555 85.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A HOH 3 D HOH 1 A CD1 PHE 113 A CD1 PHE 27 1 Y 1 A CD2 PHE 113 A CD2 PHE 27 1 Y 1 A CE1 PHE 113 A CE1 PHE 27 1 Y 1 A CE2 PHE 113 A CE2 PHE 27 1 Y 1 A CZ PHE 113 A CZ PHE 27 1 Y 1 A OE1 GLU 117 A OE1 GLU 31 1 Y 1 A OE2 GLU 117 A OE2 GLU 31 1 Y 1 A CD ARG 128 A CD ARG 42 1 Y 1 A NE ARG 128 A NE ARG 42 1 Y 1 A CZ ARG 128 A CZ ARG 42 1 Y 1 A NH1 ARG 128 A NH1 ARG 42 1 Y 1 A NH2 ARG 128 A NH2 ARG 42 1 Y 1 A GLY 87 A GLY 1 1 Y 1 A SER 88 A SER 2 1 Y 1 A HIS 89 A HIS 3 1 Y 1 A MET 90 A MET 4 1 Y 1 A LYS 142 A LYS 56 1 Y 1 A GLN 143 A GLN 57 1 Y 1 A GLU 144 A GLU 58 1 Y 1 A LYS 145 A LYS 59 1 Y 1 A VAL 146 A VAL 60 1 Y 1 A A OD1 O ASP HOH 111 84 2.06 1 A A O O HOH HOH 34 82 2.13 1 A A O O HOH HOH 14 78 2.19 1 -4.14 0.50 120.30 116.16 A A A NE CZ NH1 ARG ARG ARG 106 106 106 N 1 4.37 0.50 120.30 124.67 A A A NE CZ NH2 ARG ARG ARG 106 106 106 N 1 9.96 1.60 100.20 110.16 A A A CG SD CE MET MET MET 120 120 120 N 1 -3.15 0.50 120.30 117.15 A A A NE CZ NH1 ARG ARG ARG 136 136 136 N 1 3.53 0.50 120.30 123.83 A A A NE CZ NH2 ARG ARG ARG 136 136 136 N 1 A A O O HOH HOH 65 78 2.13 1_555 3_665 1 A A O O HOH HOH 66 81 2.17 1_555 6_765 64.85 10.254 2.00 0.190 0.100 0.000 0.190 0.000 -0.290 0.950 0.936 0.18436 0.17219 0.17279 1.000 13.23 1633 30595 32228 5.100 98.950 1.00 0.50 0.357 0.015 RANDOM 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.024 0.025 0.800 0.800 1.400 PDB ENTRY 1FJL MAXIMUM LIKELIHOOD MASK 1.000 13.23 99 532 2 0 431 0.024 0.022 444 1.943 1.920 597 4.300 5.000 50 27.393 22.174 23 13.198 15.000 83 17.137 15.000 5 0.145 0.200 64 0.015 0.020 331 0.770 1.500 254 1.595 2.000 411 2.941 3.000 190 3.961 4.500 186 0.193 0.194 1.026 125 2213 2338 20 99.830 9.186 0.057 1.000 39.670 3A02 32230 -3.00 0.083 0.087 1 18.230 327246 99.000 0.269 0.450 1.00 1.03 5.8 23071 2344 2340 0.48 99.80 0.205 0.345 1.03 1.05 7.2 23104 2331 2331 0.36 100.00 0.161 0.272 1.05 1.08 8.7 22458 2258 2258 0.29 100.00 0.124 0.212 1.08 1.12 10.6 22352 2214 2214 0.22 100.00 0.096 0.165 1.12 1.15 12.9 21392 2105 2105 0.17 100.00 0.079 0.145 1.15 1.20 14.4 20935 2050 2050 0.15 100.00 0.074 0.132 1.20 1.24 15.4 20641 2004 2004 0.14 100.00 0.065 0.123 1.24 1.29 16.7 19793 1914 1914 0.13 100.00 0.051 0.108 1.29 1.35 19.0 19225 1844 1844 0.11 100.00 0.045 0.096 1.35 1.41 21.0 18213 1748 1748 0.10 100.00 0.040 0.085 1.41 1.49 23.1 17733 1691 1691 0.09 100.00 0.035 0.078 1.49 1.58 25.3 16876 1604 1604 0.08 100.00 0.029 0.071 1.58 1.69 27.5 15823 1499 1499 0.07 100.00 0.026 0.068 1.69 1.83 28.9 14774 1404 1403 0.07 99.90 0.024 0.064 1.83 2.00 30.5 13715 1301 1301 0.07 100.00 0.024 0.062 2.00 2.24 32.0 12270 1180 1180 0.06 100.00 0.024 0.062 2.24 2.58 32.6 10557 1052 1041 0.07 99.00 0.024 0.064 2.58 3.16 31.6 8247 892 869 0.07 97.40 0.028 0.063 3.16 4.47 28.1 4279 717 573 0.07 79.90 0.028 0.066 4.47 26.2 1788 419 261 0.07 62.30 data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package refinement Garib N. Murshudov garib@ysbl.york.ac.uk 24/04/2001 Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program refmac_5.2.0019 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 Crystal structure of Aristaless homeodomain 1 N N 2 N N 3 N N 4 N N A THR 93 A THR 7 HELX_P A THR 107 A THR 21 1 1 15 A ASP 111 A ASP 25 HELX_P A GLY 123 A GLY 37 1 2 13 A THR 125 A THR 39 HELX_P A ARG 141 A ARG 55 1 3 17 metalc 2.269 A CD 1 B CD CD 1_555 A GLU 126 A OE1 GLU 40 1_555 metalc 2.546 A CD 1 B CD CD 1_555 A GLU 126 A OE2 GLU 40 1_555 metalc 2.270 A CD 1 B CD CD 1_555 A GLN 130 A OE1 GLN 44 1_555 GENE REGULATION HOMEODOMAIN, Developmental protein, DNA-binding, Homeobox, Nucleus, Gene Regulation AL_DROME UNP 1 91 Q06453 TFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV 91 146 3A02 91 146 Q06453 A 1 5 60 1 expression tag GLY 87 3A02 A Q06453 UNP 1 1 expression tag SER 88 3A02 A Q06453 UNP 2 1 expression tag HIS 89 3A02 A Q06453 UNP 3 1 expression tag MET 90 3A02 A Q06453 UNP 4 BINDING SITE FOR RESIDUE CD A 1 A CD 1 Software 4 BINDING SITE FOR RESIDUE CL A 147 A CL 147 Software 4 A GLU 116 A GLU 30 4 6_765 A GLU 126 A GLU 40 4 1_555 A GLN 130 A GLN 44 4 1_555 A CL 147 C CL 4 1_555 A CD 1 B CD 4 1_555 A GLU 126 A GLU 40 4 6_765 A GLU 126 A GLU 40 4 1_555 A GLN 130 A GLN 44 4 1_555 154 P 32 2 1