0.016474
0.000000
0.002297
0.000000
0.014288
0.000000
0.000000
0.000000
0.016458
0.00000
0.00000
0.00000
Sugiyama, K.
Park, S.-Y.
Obayashi, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
97.94
90.00
60.701
69.987
61.348
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
SE
N
238
N
C
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
doub
N
324
N
sing
Y
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
28
1803
1811
10.1038/emboj.2009.138
19461581
Structural insight into the essential PB1-PB2 subunit contact of the influenza virus RNA polymerase
2009
10.2210/pdb3a1g/pdb
pdb_00003a1g
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-02-19
ADSC QUANTUM 270
SAGITALLY FOCUSED Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
BL-17A
Photon Factory
1.0
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-17A
9675.504
RNA-directed RNA polymerase catalytic subunit
2.7.7.48
PB1 C-terminal fragment, UNP residues 678-757
2
man
polymer
4731.061
Polymerase basic protein 2
PB2 N-terminal ragment, UNP residues 1-37
2
man
polymer
18.015
water
63
nat
water
Polymerase basic protein 1, PB1, RNA-directed RNA polymerase subunit P1
RNA polymerase PB2 subunit, RNA-directed RNA polymerase subunit P3
no
yes
SQRGVLEDEQ(MSE)YQRCCNLFEKFFPSSSYRRPVGISS(MSE)VEA(MSE)VSRARIDARIDFESGRIKKEEFTEI
(MSE)KICSTIEELRRQK
SQRGVLEDEQMYQRCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFTEIMKICSTIEELRRQK
A,C
polypeptide(L)
no
yes
GGS(MSE)ERIKELRNL(MSE)SQSRTREILTKTTVDH(MSE)AIIKKYTSG
GGSMERIKELRNLMSQSRTREILTKTTVDHMAIIKKYTSG
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
strain A/Puerto Rico/8/1934 H1N1
sample
PB1
211044
Influenza A virus (A/Puerto Rico/8/34(H1N1))
562
Escherichia coli
BL21(DE3)RILcodonPlus
plasmid
modified pET28
strain A/Puerto Rico/8/1934 H1N1
sample
PB2
211044
Influenza A virus (A/Puerto Rico/8/34(H1N1))
562
Escherichia coli
BL21(DE3)RILcodonPlus
plasmid
midified pET28
1
2.24
45.08
VAPOR DIFFUSION, HANGING DROP
80mM Sodium Citrate, 20% PEG 4000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
Data collection
1
0
2009-06-09
1
1
2011-07-13
1
2
2023-11-01
1
3
2023-11-15
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
PDBJ
Y
PDBJ
2009-04-02
REL
REL
HOH
water
2ZTT
PDB ENTRY 2ZTT
PDB
experimental model
HOH
2
3
HOH
HOH
2
A
HOH
3
3
HOH
HOH
3
A
HOH
5
3
HOH
HOH
5
A
HOH
6
3
HOH
HOH
6
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
12
3
HOH
HOH
12
A
HOH
13
3
HOH
HOH
13
A
HOH
17
3
HOH
HOH
17
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
37
3
HOH
HOH
37
A
HOH
40
3
HOH
HOH
40
A
HOH
42
3
HOH
HOH
42
A
HOH
43
3
HOH
HOH
43
A
HOH
44
3
HOH
HOH
44
A
HOH
46
3
HOH
HOH
46
A
HOH
48
3
HOH
HOH
48
A
HOH
52
3
HOH
HOH
52
A
HOH
57
3
HOH
HOH
57
A
HOH
58
3
HOH
HOH
58
A
HOH
62
3
HOH
HOH
62
A
HOH
63
3
HOH
HOH
63
A
HOH
38
3
HOH
HOH
38
B
HOH
1
3
HOH
HOH
39
B
HOH
14
3
HOH
HOH
40
B
HOH
16
3
HOH
HOH
41
B
HOH
18
3
HOH
HOH
42
B
HOH
23
3
HOH
HOH
43
B
HOH
24
3
HOH
HOH
44
B
HOH
32
3
HOH
HOH
45
B
HOH
33
3
HOH
HOH
46
B
HOH
35
3
HOH
HOH
47
B
HOH
49
3
HOH
HOH
49
B
HOH
56
3
HOH
HOH
56
B
HOH
61
3
HOH
HOH
61
B
HOH
7
3
HOH
HOH
7
C
HOH
8
3
HOH
HOH
8
C
HOH
15
3
HOH
HOH
15
C
HOH
27
3
HOH
HOH
27
C
HOH
28
3
HOH
HOH
28
C
HOH
29
3
HOH
HOH
29
C
HOH
30
3
HOH
HOH
30
C
HOH
36
3
HOH
HOH
36
C
HOH
41
3
HOH
HOH
41
C
HOH
50
3
HOH
HOH
50
C
HOH
53
3
HOH
HOH
53
C
HOH
54
3
HOH
HOH
54
C
HOH
55
3
HOH
HOH
55
C
HOH
60
3
HOH
HOH
60
C
HOH
4
3
HOH
HOH
38
D
HOH
39
3
HOH
HOH
39
D
HOH
9
3
HOH
HOH
40
D
HOH
19
3
HOH
HOH
41
D
HOH
22
3
HOH
HOH
42
D
HOH
31
3
HOH
HOH
43
D
HOH
34
3
HOH
HOH
44
D
HOH
45
3
HOH
HOH
45
D
HOH
47
3
HOH
HOH
47
D
HOH
51
3
HOH
HOH
51
D
HOH
59
3
HOH
HOH
59
D
n
1
678
A
n
2
679
A
n
3
680
A
n
4
681
A
n
5
682
A
n
6
683
A
n
7
684
A
ASP
685
n
8
ASP
685
A
GLU
686
n
9
GLU
686
A
GLN
687
n
10
GLN
687
A
MSE
688
n
11
MSE
688
A
TYR
689
n
12
TYR
689
A
GLN
690
n
13
GLN
690
A
ARG
691
n
14
ARG
691
A
CYS
692
n
15
CYS
692
A
CYS
693
n
16
CYS
693
A
ASN
694
n
17
ASN
694
A
LEU
695
n
18
LEU
695
A
PHE
696
n
19
PHE
696
A
GLU
697
n
20
GLU
697
A
LYS
698
n
21
LYS
698
A
PHE
699
n
22
PHE
699
A
PHE
700
n
23
PHE
700
A
PRO
701
n
24
PRO
701
A
SER
702
n
25
SER
702
A
SER
703
n
26
SER
703
A
SER
704
n
27
SER
704
A
TYR
705
n
28
TYR
705
A
ARG
706
n
29
ARG
706
A
ARG
707
n
30
ARG
707
A
PRO
708
n
31
PRO
708
A
VAL
709
n
32
VAL
709
A
GLY
710
n
33
GLY
710
A
ILE
711
n
34
ILE
711
A
SER
712
n
35
SER
712
A
SER
713
n
36
SER
713
A
MSE
714
n
37
MSE
714
A
VAL
715
n
38
VAL
715
A
GLU
716
n
39
GLU
716
A
ALA
717
n
40
ALA
717
A
MSE
718
n
41
MSE
718
A
VAL
719
n
42
VAL
719
A
SER
720
n
43
SER
720
A
ARG
721
n
44
ARG
721
A
ALA
722
n
45
ALA
722
A
ARG
723
n
46
ARG
723
A
ILE
724
n
47
ILE
724
A
ASP
725
n
48
ASP
725
A
ALA
726
n
49
ALA
726
A
ARG
727
n
50
ARG
727
A
ILE
728
n
51
ILE
728
A
ASP
729
n
52
ASP
729
A
PHE
730
n
53
PHE
730
A
GLU
731
n
54
GLU
731
A
SER
732
n
55
SER
732
A
GLY
733
n
56
GLY
733
A
ARG
734
n
57
ARG
734
A
ILE
735
n
58
ILE
735
A
LYS
736
n
59
LYS
736
A
LYS
737
n
60
LYS
737
A
GLU
738
n
61
GLU
738
A
GLU
739
n
62
GLU
739
A
PHE
740
n
63
PHE
740
A
THR
741
n
64
THR
741
A
GLU
742
n
65
GLU
742
A
ILE
743
n
66
ILE
743
A
MSE
744
n
67
MSE
744
A
LYS
745
n
68
LYS
745
A
ILE
746
n
69
ILE
746
A
CYS
747
n
70
CYS
747
A
SER
748
n
71
SER
748
A
THR
749
n
72
THR
749
A
ILE
750
n
73
ILE
750
A
GLU
751
n
74
GLU
751
A
GLU
752
n
75
GLU
752
A
LEU
753
n
76
LEU
753
A
ARG
754
n
77
ARG
754
A
ARG
755
n
78
ARG
755
A
GLN
756
n
79
GLN
756
A
LYS
757
n
80
LYS
757
A
GLY
-2
n
1
GLY
-2
B
GLY
-1
n
2
GLY
-1
B
SER
0
n
3
SER
0
B
MSE
1
n
4
MSE
1
B
GLU
2
n
5
GLU
2
B
ARG
3
n
6
ARG
3
B
ILE
4
n
7
ILE
4
B
LYS
5
n
8
LYS
5
B
GLU
6
n
9
GLU
6
B
LEU
7
n
10
LEU
7
B
ARG
8
n
11
ARG
8
B
ASN
9
n
12
ASN
9
B
LEU
10
n
13
LEU
10
B
MSE
11
n
14
MSE
11
B
SER
12
n
15
SER
12
B
GLN
13
n
16
GLN
13
B
SER
14
n
17
SER
14
B
ARG
15
n
18
ARG
15
B
THR
16
n
19
THR
16
B
ARG
17
n
20
ARG
17
B
GLU
18
n
21
GLU
18
B
ILE
19
n
22
ILE
19
B
LEU
20
n
23
LEU
20
B
THR
21
n
24
THR
21
B
LYS
22
n
25
LYS
22
B
THR
23
n
26
THR
23
B
THR
24
n
27
THR
24
B
VAL
25
n
28
VAL
25
B
ASP
26
n
29
ASP
26
B
HIS
27
n
30
HIS
27
B
MSE
28
n
31
MSE
28
B
ALA
29
n
32
ALA
29
B
ILE
30
n
33
ILE
30
B
ILE
31
n
34
ILE
31
B
LYS
32
n
35
LYS
32
B
LYS
33
n
36
LYS
33
B
TYR
34
n
37
TYR
34
B
THR
35
n
38
THR
35
B
n
39
36
B
n
40
37
B
n
1
678
C
n
2
679
C
n
3
680
C
n
4
681
C
n
5
682
C
n
6
683
C
n
7
684
C
ASP
685
n
8
ASP
685
C
GLU
686
n
9
GLU
686
C
GLN
687
n
10
GLN
687
C
MSE
688
n
11
MSE
688
C
TYR
689
n
12
TYR
689
C
GLN
690
n
13
GLN
690
C
ARG
691
n
14
ARG
691
C
CYS
692
n
15
CYS
692
C
CYS
693
n
16
CYS
693
C
ASN
694
n
17
ASN
694
C
LEU
695
n
18
LEU
695
C
PHE
696
n
19
PHE
696
C
GLU
697
n
20
GLU
697
C
LYS
698
n
21
LYS
698
C
PHE
699
n
22
PHE
699
C
PHE
700
n
23
PHE
700
C
PRO
701
n
24
PRO
701
C
SER
702
n
25
SER
702
C
SER
703
n
26
SER
703
C
SER
704
n
27
SER
704
C
TYR
705
n
28
TYR
705
C
ARG
706
n
29
ARG
706
C
ARG
707
n
30
ARG
707
C
PRO
708
n
31
PRO
708
C
VAL
709
n
32
VAL
709
C
GLY
710
n
33
GLY
710
C
ILE
711
n
34
ILE
711
C
SER
712
n
35
SER
712
C
SER
713
n
36
SER
713
C
MSE
714
n
37
MSE
714
C
VAL
715
n
38
VAL
715
C
GLU
716
n
39
GLU
716
C
ALA
717
n
40
ALA
717
C
MSE
718
n
41
MSE
718
C
VAL
719
n
42
VAL
719
C
SER
720
n
43
SER
720
C
ARG
721
n
44
ARG
721
C
ALA
722
n
45
ALA
722
C
ARG
723
n
46
ARG
723
C
ILE
724
n
47
ILE
724
C
ASP
725
n
48
ASP
725
C
ALA
726
n
49
ALA
726
C
ARG
727
n
50
ARG
727
C
ILE
728
n
51
ILE
728
C
ASP
729
n
52
ASP
729
C
PHE
730
n
53
PHE
730
C
GLU
731
n
54
GLU
731
C
SER
732
n
55
SER
732
C
GLY
733
n
56
GLY
733
C
ARG
734
n
57
ARG
734
C
ILE
735
n
58
ILE
735
C
LYS
736
n
59
LYS
736
C
LYS
737
n
60
LYS
737
C
GLU
738
n
61
GLU
738
C
GLU
739
n
62
GLU
739
C
PHE
740
n
63
PHE
740
C
THR
741
n
64
THR
741
C
GLU
742
n
65
GLU
742
C
ILE
743
n
66
ILE
743
C
MSE
744
n
67
MSE
744
C
LYS
745
n
68
LYS
745
C
ILE
746
n
69
ILE
746
C
CYS
747
n
70
CYS
747
C
SER
748
n
71
SER
748
C
THR
749
n
72
THR
749
C
ILE
750
n
73
ILE
750
C
GLU
751
n
74
GLU
751
C
GLU
752
n
75
GLU
752
C
LEU
753
n
76
LEU
753
C
ARG
754
n
77
ARG
754
C
ARG
755
n
78
ARG
755
C
GLN
756
n
79
GLN
756
C
LYS
757
n
80
LYS
757
C
GLY
-2
n
1
GLY
-2
D
GLY
-1
n
2
GLY
-1
D
SER
0
n
3
SER
0
D
MSE
1
n
4
MSE
1
D
GLU
2
n
5
GLU
2
D
ARG
3
n
6
ARG
3
D
ILE
4
n
7
ILE
4
D
LYS
5
n
8
LYS
5
D
GLU
6
n
9
GLU
6
D
LEU
7
n
10
LEU
7
D
ARG
8
n
11
ARG
8
D
ASN
9
n
12
ASN
9
D
LEU
10
n
13
LEU
10
D
MSE
11
n
14
MSE
11
D
SER
12
n
15
SER
12
D
GLN
13
n
16
GLN
13
D
SER
14
n
17
SER
14
D
ARG
15
n
18
ARG
15
D
THR
16
n
19
THR
16
D
ARG
17
n
20
ARG
17
D
GLU
18
n
21
GLU
18
D
ILE
19
n
22
ILE
19
D
LEU
20
n
23
LEU
20
D
THR
21
n
24
THR
21
D
LYS
22
n
25
LYS
22
D
THR
23
n
26
THR
23
D
THR
24
n
27
THR
24
D
VAL
25
n
28
VAL
25
D
ASP
26
n
29
ASP
26
D
HIS
27
n
30
HIS
27
D
MSE
28
n
31
MSE
28
D
ALA
29
n
32
ALA
29
D
ILE
30
n
33
ILE
30
D
ILE
31
n
34
ILE
31
D
LYS
32
n
35
LYS
32
D
LYS
33
n
36
LYS
33
D
TYR
34
n
37
TYR
34
D
THR
35
n
38
THR
35
D
n
39
36
D
n
40
37
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
3140
-27
6930
2950
-27
7000
A
MSE
688
SELENOMETHIONINE
A
MSE
11
MET
A
MSE
714
SELENOMETHIONINE
A
MSE
37
MET
A
MSE
718
SELENOMETHIONINE
A
MSE
41
MET
A
MSE
744
SELENOMETHIONINE
A
MSE
67
MET
B
MSE
1
SELENOMETHIONINE
B
MSE
4
MET
B
MSE
11
SELENOMETHIONINE
B
MSE
14
MET
B
MSE
28
SELENOMETHIONINE
B
MSE
31
MET
C
MSE
688
SELENOMETHIONINE
C
MSE
11
MET
C
MSE
714
SELENOMETHIONINE
C
MSE
37
MET
C
MSE
718
SELENOMETHIONINE
C
MSE
41
MET
C
MSE
744
SELENOMETHIONINE
C
MSE
67
MET
D
MSE
1
SELENOMETHIONINE
D
MSE
4
MET
D
MSE
11
SELENOMETHIONINE
D
MSE
14
MET
D
MSE
28
SELENOMETHIONINE
D
MSE
31
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
SER
678
A
SER
1
1
Y
1
A
GLN
679
A
GLN
2
1
Y
1
A
ARG
680
A
ARG
3
1
Y
1
A
GLY
681
A
GLY
4
1
Y
1
A
VAL
682
A
VAL
5
1
Y
1
A
LEU
683
A
LEU
6
1
Y
1
A
GLU
684
A
GLU
7
1
Y
1
B
SER
36
B
SER
39
1
Y
1
B
GLY
37
B
GLY
40
1
Y
1
C
SER
678
C
SER
1
1
Y
1
C
GLN
679
C
GLN
2
1
Y
1
C
ARG
680
C
ARG
3
1
Y
1
C
GLY
681
C
GLY
4
1
Y
1
C
VAL
682
C
VAL
5
1
Y
1
C
LEU
683
C
LEU
6
1
Y
1
C
GLU
684
C
GLU
7
1
Y
1
D
SER
36
D
SER
39
1
Y
1
D
GLY
37
D
GLY
40
1
Y
1
A
A
SER
SER
703
704
-147.02
1
-19.85
2.20
98.90
79.05
A
A
A
CG
SE
CE
MSE
MSE
MSE
718
718
718
N
1
10.30
1.70
111.00
121.30
B
B
B
CB
CG
CD1
LEU
LEU
LEU
10
10
10
N
1
-3.34
0.50
120.30
116.96
C
C
C
NE
CZ
NH2
ARG
ARG
ARG
723
723
723
N
1
A
A
CB
SG
CYS
CYS
693
693
-0.096
0.016
1.812
1.716
N
1
B
B
SE
CE
MSE
MSE
1
1
-0.427
0.059
1.950
1.523
N
1
B
B
CB
CG
GLU
GLU
2
2
0.122
0.019
1.517
1.639
N
1
B
B
CG
CD
GLU
GLU
2
2
0.107
0.015
1.515
1.622
N
1
C
C
CB
SG
CYS
CYS
693
693
-0.107
0.016
1.812
1.705
N
1
A
SER
703
-60.77
57.07
1
A
TYR
705
-92.60
57.49
1
C
ARG
706
-68.30
98.07
1
D
ILE
30
-51.26
-70.06
36.543
4.34
0.00
0.70
-2.46
0.00
-1.69
0.931
0.894
0.28967
0.2377
0.24039
0.24039
1.70
20.00
1315
25865
24512
5.1
100.00
2.709
0.092
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.137
0.139
0.80
0.80
1.20
PDB ENTRY 2ZTT
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.70
20.00
63
1889
0
0
1826
0.023
0.022
1844
1.845
1.975
2448
6.734
5.000
218
37.835
22.045
88
18.170
15.000
400
18.653
15.000
26
0.146
0.200
268
0.006
0.020
1332
0.247
0.200
948
0.308
0.200
1291
0.158
0.200
85
0.226
0.200
50
0.264
0.200
6
1.503
1.500
1152
2.164
2.000
1792
3.729
3.000
777
4.906
4.500
656
0.31
0.235
1.744
69
1399
20
100.00
1.70
50.0
3A1G
25865
25865
0.0
0.0
0.044
1
0.0
5.1
92.2
0.124
1.70
1.76
25.0
73.0
refinement
REFMAC
5.2.0019
data collection
ADSC
Quantum
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
High-Resolution Crystal Structure of RNA polymerase PB1-PB2 subunits from Influenza A Virus
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
GLU
686
A
GLU
9
HELX_P
A
PHE
700
A
PHE
23
1
1
15
A
SER
713
A
SER
36
HELX_P
A
SER
732
A
SER
55
1
2
20
A
LYS
736
A
LYS
59
HELX_P
A
GLN
756
A
GLN
79
1
3
21
B
GLY
-2
B
GLY
1
HELX_P
B
MSE
11
B
MSE
14
1
4
14
B
GLN
13
B
GLN
16
HELX_P
B
THR
23
B
THR
26
1
5
11
B
ASP
26
B
ASP
29
HELX_P
B
TYR
34
B
TYR
37
1
6
9
C
ASP
685
C
ASP
8
HELX_P
C
PHE
700
C
PHE
23
1
7
16
C
SER
713
C
SER
36
HELX_P
C
SER
732
C
SER
55
1
8
20
C
LYS
736
C
LYS
59
HELX_P
C
GLN
756
C
GLN
79
1
9
21
D
GLY
-2
D
GLY
1
HELX_P
D
MSE
11
D
MSE
14
1
10
14
D
GLN
13
D
GLN
16
HELX_P
D
THR
23
D
THR
26
1
11
11
D
ASP
26
D
ASP
29
HELX_P
D
TYR
34
D
TYR
37
1
12
9
covale
1.338
both
A
GLN
687
A
C
GLN
10
1_555
A
MSE
688
A
N
MSE
11
1_555
covale
1.335
both
A
MSE
688
A
C
MSE
11
1_555
A
TYR
689
A
N
TYR
12
1_555
covale
1.328
both
A
SER
713
A
C
SER
36
1_555
A
MSE
714
A
N
MSE
37
1_555
covale
1.333
both
A
MSE
714
A
C
MSE
37
1_555
A
VAL
715
A
N
VAL
38
1_555
covale
1.337
both
A
ALA
717
A
C
ALA
40
1_555
A
MSE
718
A
N
MSE
41
1_555
covale
1.330
both
A
MSE
718
A
C
MSE
41
1_555
A
VAL
719
A
N
VAL
42
1_555
covale
1.339
both
A
ILE
743
A
C
ILE
66
1_555
A
MSE
744
A
N
MSE
67
1_555
covale
1.333
both
A
MSE
744
A
C
MSE
67
1_555
A
LYS
745
A
N
LYS
68
1_555
covale
1.338
both
B
SER
0
B
C
SER
3
1_555
B
MSE
1
B
N
MSE
4
1_555
covale
1.345
both
B
MSE
1
B
C
MSE
4
1_555
B
GLU
2
B
N
GLU
5
1_555
covale
1.313
both
B
LEU
10
B
C
LEU
13
1_555
B
MSE
11
B
N
MSE
14
1_555
covale
1.329
both
B
MSE
11
B
C
MSE
14
1_555
B
SER
12
B
N
SER
15
1_555
covale
1.351
both
B
HIS
27
B
C
HIS
30
1_555
B
MSE
28
B
N
MSE
31
1_555
covale
1.325
both
B
MSE
28
B
C
MSE
31
1_555
B
ALA
29
B
N
ALA
32
1_555
covale
1.339
both
C
GLN
687
C
C
GLN
10
1_555
C
MSE
688
C
N
MSE
11
1_555
covale
1.332
both
C
MSE
688
C
C
MSE
11
1_555
C
TYR
689
C
N
TYR
12
1_555
covale
1.333
both
C
SER
713
C
C
SER
36
1_555
C
MSE
714
C
N
MSE
37
1_555
covale
1.328
both
C
MSE
714
C
C
MSE
37
1_555
C
VAL
715
C
N
VAL
38
1_555
covale
1.317
both
C
ALA
717
C
C
ALA
40
1_555
C
MSE
718
C
N
MSE
41
1_555
covale
1.333
both
C
MSE
718
C
C
MSE
41
1_555
C
VAL
719
C
N
VAL
42
1_555
covale
1.350
both
C
ILE
743
C
C
ILE
66
1_555
C
MSE
744
C
N
MSE
67
1_555
covale
1.335
both
C
MSE
744
C
C
MSE
67
1_555
C
LYS
745
C
N
LYS
68
1_555
covale
1.335
both
D
SER
0
D
C
SER
3
1_555
D
MSE
1
D
N
MSE
4
1_555
covale
1.329
both
D
MSE
1
D
C
MSE
4
1_555
D
GLU
2
D
N
GLU
5
1_555
covale
1.332
both
D
LEU
10
D
C
LEU
13
1_555
D
MSE
11
D
N
MSE
14
1_555
covale
1.341
both
D
MSE
11
D
C
MSE
14
1_555
D
SER
12
D
N
SER
15
1_555
covale
1.351
both
D
HIS
27
D
C
HIS
30
1_555
D
MSE
28
D
N
MSE
31
1_555
covale
1.332
both
D
MSE
28
D
C
MSE
31
1_555
D
ALA
29
D
N
ALA
32
1_555
TRANSFERASE
Influenza virus, RNA polymerase, Nucleotide-binding, Nucleotidyltransferase, Nucleus, RNA replication, RNA-directed RNA polymerase, Transferase, Mitochondrion, mRNA capping, mRNA processing, Virion
RDRP_I34A1
UNP
1
678
P03431
SQRGVLEDEQMYQRCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFTEIMKICSTIEELRRQK
PB2_I34A1
UNP
2
1
P03428
MERIKELRNLMSQSRTREILTKTTVDHMAIIKKYTSG
678
757
3A1G
678
757
P03431
A
1
1
80
1
37
3A1G
1
37
P03428
B
2
4
40
678
757
3A1G
678
757
P03431
C
1
1
80
1
37
3A1G
1
37
P03428
D
2
4
40
2
expression tag
GLY
-2
3A1G
B
P03428
UNP
1
2
expression tag
GLY
-1
3A1G
B
P03428
UNP
2
2
expression tag
SER
0
3A1G
B
P03428
UNP
3
4
expression tag
GLY
-2
3A1G
D
P03428
UNP
1
4
expression tag
GLY
-1
3A1G
D
P03428
UNP
2
4
expression tag
SER
0
3A1G
D
P03428
UNP
3
5
C 1 2 1