0.017175
0.000000
0.000000
0.000000
0.011653
0.000000
0.000000
0.000000
0.021513
0.000000
0.000000
0.000000
Adachi, M.
Tamada, T.
Hidaka, K.
Kimura, T.
Kiso, Y.
Kuroki, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
58.223
85.815
46.484
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C30 H40 N4 O5 S
568.727
(4R)-3-[(2S,3S)-3-{[(4-amino-2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-5,5-dimethyl-N-(2-methylprop -2-en-1-yl)-1,3-thiazolidine-4-carboxamide
KNI-1689
peptide-like
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
C
Y
198
N
C
Y
199
N
C
Y
200
N
C
Y
201
N
C
N
202
N
N
Y
203
N
C
N
204
N
C
Y
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
N
N
212
N
O
N
213
S
C
Y
214
N
C
N
215
N
C
Y
216
N
C
N
217
S
C
N
218
N
O
Y
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
N
223
N
C
N
224
N
N
N
225
N
O
N
226
R
C
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
S
N
232
N
N
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
N
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
N
S
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
N
372
N
C
N
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
R
C
N
403
N
O
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
N
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
N
453
N
O
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
N
471
N
C
N
472
N
C
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
Y
187
N
doub
Y
188
N
sing
Y
189
N
sing
N
190
N
sing
Y
191
N
doub
Y
192
N
sing
N
193
N
sing
Y
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
Y
204
N
doub
Y
205
N
sing
Y
206
N
sing
Y
207
N
doub
Y
208
N
sing
Y
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
Y
412
N
doub
Y
413
N
sing
Y
414
N
sing
N
415
N
sing
Y
416
N
doub
Y
417
N
sing
Y
418
N
sing
N
419
N
sing
Y
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
doub
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
Y
440
N
doub
Y
441
N
sing
Y
442
N
sing
N
443
N
sing
Y
444
N
doub
N
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
52
7604
7617
10.1021/jm9005115
19954246
Small-sized human immunodeficiency virus type-1 protease inhibitors containing allophenylnorstatine to explore the S2' pocket.
2009
10.2210/pdb3a2o/pdb
pdb_00003a2o
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2008-07-06
SINGLE WAVELENGTH
M
x-ray
1
0.800
1.0
BL41XU
SPring-8
0.800
SYNCHROTRON
SPRING-8 BEAMLINE BL41XU
10740.677
PROTEASE
3.4.23.16
Q7K, L33I, L63I C67A, C95A
2
man
polymer
92.094
GLYCEROL
1
syn
non-polymer
568.727
(4R)-3-[(2S,3S)-3-{[(4-amino-2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-5,5-dimethyl-N-(2-methylprop -2-en-1-yl)-1,3-thiazolidine-4-carboxamide
1
syn
non-polymer
18.015
water
632
nat
water
no
no
PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT
PVNIIGRNLLTQIGATLNF
PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT
PVNIIGRNLLTQIGATLNF
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
pol
11676
Human immunodeficiency virus 1
562
Escherichia coli
BL21(DE3)
plasmid
pET43a
1
2.70
54.49
VAPOR DIFFUSION, HANGING DROP
5.0
126mM phosphate, 63mM sodium citrate buffer pH 5.0, 0.2M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp
database_2
entity
pdbx_entity_nonpoly
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Other
Database references
Derived calculations
Structure summary
Data collection
1
0
2010-03-02
1
1
2011-07-13
1
2
2012-12-12
1
3
2021-11-10
1
4
2024-05-29
_chem_comp.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2009-05-26
REL
REL
GOL
GLYCEROL
KNJ
(4R)-3-[(2S,3S)-3-{[(4-amino-2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-5,5-dimethyl-N-(2-methylprop -2-en-1-yl)-1,3-thiazolidine-4-carboxamide
HOH
water
Inhibitor
KNI-1689
Peptide-like
GOL
803
2
GOL
GOL
803
B
KNI
999
3
KNJ
KNJ
999
B
HOH
1001
4
HOH
HOH
1001
A
HOH
1006
4
HOH
HOH
1006
A
HOH
1007
4
HOH
HOH
1007
A
HOH
1010
4
HOH
HOH
1010
A
HOH
1011
4
HOH
HOH
1011
A
HOH
1012
4
HOH
HOH
1012
A
HOH
1013
4
HOH
HOH
1013
A
HOH
1014
4
HOH
HOH
1014
A
HOH
1016
4
HOH
HOH
1016
A
HOH
1017
4
HOH
HOH
1017
A
HOH
1020
4
HOH
HOH
1020
A
HOH
1024
4
HOH
HOH
1024
A
HOH
1025
4
HOH
HOH
1025
A
HOH
1026
4
HOH
HOH
1026
A
HOH
1032
4
HOH
HOH
1032
A
HOH
1033
4
HOH
HOH
1033
A
HOH
1037
4
HOH
HOH
1037
A
HOH
1038
4
HOH
HOH
1038
A
HOH
1039
4
HOH
HOH
1039
A
HOH
1043
4
HOH
HOH
1043
A
HOH
1044
4
HOH
HOH
1044
A
HOH
1045
4
HOH
HOH
1045
A
HOH
1046
4
HOH
HOH
1046
A
HOH
1048
4
HOH
HOH
1048
A
HOH
1049
4
HOH
HOH
1049
A
HOH
1052
4
HOH
HOH
1052
A
HOH
1053
4
HOH
HOH
1053
A
HOH
1056
4
HOH
HOH
1056
A
HOH
1057
4
HOH
HOH
1057
A
HOH
1058
4
HOH
HOH
1058
A
HOH
1066
4
HOH
HOH
1066
A
HOH
1068
4
HOH
HOH
1068
A
HOH
1069
4
HOH
HOH
1069
A
HOH
1070
4
HOH
HOH
1070
A
HOH
1072
4
HOH
HOH
1072
A
HOH
1073
4
HOH
HOH
1073
A
HOH
1075
4
HOH
HOH
1075
A
HOH
1076
4
HOH
HOH
1076
A
HOH
1078
4
HOH
HOH
1078
A
HOH
1081
4
HOH
HOH
1081
A
HOH
1083
4
HOH
HOH
1083
A
HOH
1085
4
HOH
HOH
1085
A
HOH
1092
4
HOH
HOH
1092
A
HOH
1093
4
HOH
HOH
1093
A
HOH
1094
4
HOH
HOH
1094
A
HOH
1096
4
HOH
HOH
1096
A
HOH
1097
4
HOH
HOH
1097
A
HOH
1098
4
HOH
HOH
1098
A
HOH
1099
4
HOH
HOH
1099
A
HOH
1102
4
HOH
HOH
1102
A
HOH
1104
4
HOH
HOH
1104
A
HOH
1106
4
HOH
HOH
1106
A
HOH
1108
4
HOH
HOH
1108
A
HOH
1112
4
HOH
HOH
1112
A
HOH
1114
4
HOH
HOH
1114
A
HOH
1115
4
HOH
HOH
1115
A
HOH
1119
4
HOH
HOH
1119
A
HOH
1121
4
HOH
HOH
1121
A
HOH
1122
4
HOH
HOH
1122
A
HOH
1124
4
HOH
HOH
1124
A
HOH
1127
4
HOH
HOH
1127
A
HOH
1128
4
HOH
HOH
1128
A
HOH
1129
4
HOH
HOH
1129
A
HOH
1132
4
HOH
HOH
1132
A
HOH
1133
4
HOH
HOH
1133
A
HOH
1134
4
HOH
HOH
1134
A
HOH
1135
4
HOH
HOH
1135
A
HOH
1137
4
HOH
HOH
1137
A
HOH
1138
4
HOH
HOH
1138
A
HOH
1139
4
HOH
HOH
1139
A
HOH
1142
4
HOH
HOH
1142
A
HOH
1146
4
HOH
HOH
1146
A
HOH
1147
4
HOH
HOH
1147
A
HOH
1149
4
HOH
HOH
1149
A
HOH
1151
4
HOH
HOH
1151
A
HOH
1154
4
HOH
HOH
1154
A
HOH
1156
4
HOH
HOH
1156
A
HOH
1157
4
HOH
HOH
1157
A
HOH
1159
4
HOH
HOH
1159
A
HOH
1160
4
HOH
HOH
1160
A
HOH
1162
4
HOH
HOH
1162
A
HOH
1164
4
HOH
HOH
1164
A
HOH
1165
4
HOH
HOH
1165
A
HOH
1166
4
HOH
HOH
1166
A
HOH
1167
4
HOH
HOH
1167
A
HOH
1168
4
HOH
HOH
1168
A
HOH
1169
4
HOH
HOH
1169
A
HOH
1170
4
HOH
HOH
1170
A
HOH
1171
4
HOH
HOH
1171
A
HOH
1172
4
HOH
HOH
1172
A
HOH
1177
4
HOH
HOH
1177
A
HOH
1181
4
HOH
HOH
1181
A
HOH
1183
4
HOH
HOH
1183
A
HOH
1185
4
HOH
HOH
1185
A
HOH
1186
4
HOH
HOH
1186
A
HOH
1187
4
HOH
HOH
1187
A
HOH
1188
4
HOH
HOH
1188
A
HOH
1190
4
HOH
HOH
1190
A
HOH
1191
4
HOH
HOH
1191
A
HOH
1197
4
HOH
HOH
1197
A
HOH
1198
4
HOH
HOH
1198
A
HOH
1199
4
HOH
HOH
1199
A
HOH
1202
4
HOH
HOH
1202
A
HOH
1205
4
HOH
HOH
1205
A
HOH
1207
4
HOH
HOH
1207
A
HOH
1211
4
HOH
HOH
1211
A
HOH
1212
4
HOH
HOH
1212
A
HOH
1213
4
HOH
HOH
1213
A
HOH
1214
4
HOH
HOH
1214
A
HOH
1216
4
HOH
HOH
1216
A
HOH
1220
4
HOH
HOH
1220
A
HOH
1221
4
HOH
HOH
1221
A
HOH
1224
4
HOH
HOH
1224
A
HOH
1225
4
HOH
HOH
1225
A
HOH
1229
4
HOH
HOH
1229
A
HOH
1230
4
HOH
HOH
1230
A
HOH
1232
4
HOH
HOH
1232
A
HOH
1233
4
HOH
HOH
1233
A
HOH
1236
4
HOH
HOH
1236
A
HOH
1237
4
HOH
HOH
1237
A
HOH
1239
4
HOH
HOH
1239
A
HOH
1243
4
HOH
HOH
1243
A
HOH
1244
4
HOH
HOH
1244
A
HOH
1245
4
HOH
HOH
1245
A
HOH
1246
4
HOH
HOH
1246
A
HOH
1247
4
HOH
HOH
1247
A
HOH
1254
4
HOH
HOH
1254
A
HOH
1256
4
HOH
HOH
1256
A
HOH
1258
4
HOH
HOH
1258
A
HOH
1259
4
HOH
HOH
1259
A
HOH
1262
4
HOH
HOH
1262
A
HOH
1264
4
HOH
HOH
1264
A
HOH
1265
4
HOH
HOH
1265
A
HOH
1266
4
HOH
HOH
1266
A
HOH
1267
4
HOH
HOH
1267
A
HOH
1269
4
HOH
HOH
1269
A
HOH
1273
4
HOH
HOH
1273
A
HOH
1275
4
HOH
HOH
1275
A
HOH
1276
4
HOH
HOH
1276
A
HOH
1277
4
HOH
HOH
1277
A
HOH
1278
4
HOH
HOH
1278
A
HOH
1279
4
HOH
HOH
1279
A
HOH
1282
4
HOH
HOH
1282
A
HOH
1284
4
HOH
HOH
1284
A
HOH
1287
4
HOH
HOH
1287
A
HOH
1288
4
HOH
HOH
1288
A
HOH
1289
4
HOH
HOH
1289
A
HOH
1291
4
HOH
HOH
1291
A
HOH
1292
4
HOH
HOH
1292
A
HOH
1298
4
HOH
HOH
1298
A
HOH
1299
4
HOH
HOH
1299
A
HOH
1304
4
HOH
HOH
1304
A
HOH
1308
4
HOH
HOH
1308
A
HOH
1310
4
HOH
HOH
1310
A
HOH
1314
4
HOH
HOH
1314
A
HOH
1320
4
HOH
HOH
1320
A
HOH
1321
4
HOH
HOH
1321
A
HOH
1322
4
HOH
HOH
1322
A
HOH
1323
4
HOH
HOH
1323
A
HOH
1328
4
HOH
HOH
1328
A
HOH
1329
4
HOH
HOH
1329
A
HOH
1334
4
HOH
HOH
1334
A
HOH
1337
4
HOH
HOH
1337
A
HOH
1339
4
HOH
HOH
1339
A
HOH
1340
4
HOH
HOH
1340
A
HOH
1343
4
HOH
HOH
1343
A
HOH
1344
4
HOH
HOH
1344
A
HOH
1345
4
HOH
HOH
1345
A
HOH
1347
4
HOH
HOH
1347
A
HOH
1353
4
HOH
HOH
1353
A
HOH
1354
4
HOH
HOH
1354
A
HOH
1357
4
HOH
HOH
1357
A
HOH
1358
4
HOH
HOH
1358
A
HOH
1360
4
HOH
HOH
1360
A
HOH
1365
4
HOH
HOH
1365
A
HOH
1366
4
HOH
HOH
1366
A
HOH
1367
4
HOH
HOH
1367
A
HOH
1368
4
HOH
HOH
1368
A
HOH
1369
4
HOH
HOH
1369
A
HOH
1370
4
HOH
HOH
1370
A
HOH
1371
4
HOH
HOH
1371
A
HOH
1372
4
HOH
HOH
1372
A
HOH
1373
4
HOH
HOH
1373
A
HOH
1376
4
HOH
HOH
1376
A
HOH
1377
4
HOH
HOH
1377
A
HOH
1382
4
HOH
HOH
1382
A
HOH
1383
4
HOH
HOH
1383
A
HOH
1384
4
HOH
HOH
1384
A
HOH
1386
4
HOH
HOH
1386
A
HOH
1389
4
HOH
HOH
1389
A
HOH
1397
4
HOH
HOH
1397
A
HOH
1398
4
HOH
HOH
1398
A
HOH
1399
4
HOH
HOH
1399
A
HOH
1400
4
HOH
HOH
1400
A
HOH
1403
4
HOH
HOH
1403
A
HOH
1404
4
HOH
HOH
1404
A
HOH
1405
4
HOH
HOH
1405
A
HOH
1406
4
HOH
HOH
1406
A
HOH
1407
4
HOH
HOH
1407
A
HOH
1409
4
HOH
HOH
1409
A
HOH
1410
4
HOH
HOH
1410
A
HOH
1411
4
HOH
HOH
1411
A
HOH
1412
4
HOH
HOH
1412
A
HOH
1417
4
HOH
HOH
1417
A
HOH
1420
4
HOH
HOH
1420
A
HOH
1424
4
HOH
HOH
1424
A
HOH
1427
4
HOH
HOH
1427
A
HOH
1432
4
HOH
HOH
1432
A
HOH
1433
4
HOH
HOH
1433
A
HOH
1435
4
HOH
HOH
1435
A
HOH
1437
4
HOH
HOH
1437
A
HOH
1438
4
HOH
HOH
1438
A
HOH
1441
4
HOH
HOH
1441
A
HOH
1442
4
HOH
HOH
1442
A
HOH
1445
4
HOH
HOH
1445
A
HOH
1447
4
HOH
HOH
1447
A
HOH
1448
4
HOH
HOH
1448
A
HOH
1450
4
HOH
HOH
1450
A
HOH
1451
4
HOH
HOH
1451
A
HOH
1452
4
HOH
HOH
1452
A
HOH
1455
4
HOH
HOH
1455
A
HOH
1457
4
HOH
HOH
1457
A
HOH
1459
4
HOH
HOH
1459
A
HOH
1464
4
HOH
HOH
1464
A
HOH
1465
4
HOH
HOH
1465
A
HOH
1466
4
HOH
HOH
1466
A
HOH
1467
4
HOH
HOH
1467
A
HOH
1468
4
HOH
HOH
1468
A
HOH
1469
4
HOH
HOH
1469
A
HOH
1470
4
HOH
HOH
1470
A
HOH
1471
4
HOH
HOH
1471
A
HOH
1473
4
HOH
HOH
1473
A
HOH
1474
4
HOH
HOH
1474
A
HOH
1478
4
HOH
HOH
1478
A
HOH
1479
4
HOH
HOH
1479
A
HOH
1480
4
HOH
HOH
1480
A
HOH
1481
4
HOH
HOH
1481
A
HOH
1485
4
HOH
HOH
1485
A
HOH
1486
4
HOH
HOH
1486
A
HOH
1489
4
HOH
HOH
1489
A
HOH
1490
4
HOH
HOH
1490
A
HOH
1491
4
HOH
HOH
1491
A
HOH
1492
4
HOH
HOH
1492
A
HOH
1493
4
HOH
HOH
1493
A
HOH
1494
4
HOH
HOH
1494
A
HOH
1496
4
HOH
HOH
1496
A
HOH
1497
4
HOH
HOH
1497
A
HOH
1500
4
HOH
HOH
1500
A
HOH
1501
4
HOH
HOH
1501
A
HOH
1502
4
HOH
HOH
1502
A
HOH
1507
4
HOH
HOH
1507
A
HOH
1509
4
HOH
HOH
1509
A
HOH
1510
4
HOH
HOH
1510
A
HOH
1512
4
HOH
HOH
1512
A
HOH
1514
4
HOH
HOH
1514
A
HOH
1515
4
HOH
HOH
1515
A
HOH
1516
4
HOH
HOH
1516
A
HOH
1518
4
HOH
HOH
1518
A
HOH
1529
4
HOH
HOH
1529
A
HOH
1550
4
HOH
HOH
1550
A
HOH
1551
4
HOH
HOH
1551
A
HOH
1552
4
HOH
HOH
1552
A
HOH
1553
4
HOH
HOH
1553
A
HOH
1556
4
HOH
HOH
1556
A
HOH
1557
4
HOH
HOH
1557
A
HOH
1558
4
HOH
HOH
1558
A
HOH
1559
4
HOH
HOH
1559
A
HOH
1560
4
HOH
HOH
1560
A
HOH
1561
4
HOH
HOH
1561
A
HOH
1562
4
HOH
HOH
1562
A
HOH
1563
4
HOH
HOH
1563
A
HOH
1564
4
HOH
HOH
1564
A
HOH
1566
4
HOH
HOH
1566
A
HOH
1567
4
HOH
HOH
1567
A
HOH
1570
4
HOH
HOH
1570
A
HOH
1573
4
HOH
HOH
1573
A
HOH
1576
4
HOH
HOH
1576
A
HOH
1577
4
HOH
HOH
1577
A
HOH
1579
4
HOH
HOH
1579
A
HOH
1580
4
HOH
HOH
1580
A
HOH
1581
4
HOH
HOH
1581
A
HOH
1583
4
HOH
HOH
1583
A
HOH
1587
4
HOH
HOH
1587
A
HOH
1589
4
HOH
HOH
1589
A
HOH
1591
4
HOH
HOH
1591
A
HOH
1593
4
HOH
HOH
1593
A
HOH
1594
4
HOH
HOH
1594
A
HOH
1598
4
HOH
HOH
1598
A
HOH
1599
4
HOH
HOH
1599
A
HOH
1600
4
HOH
HOH
1600
A
HOH
1601
4
HOH
HOH
1601
A
HOH
1602
4
HOH
HOH
1602
A
HOH
1603
4
HOH
HOH
1603
A
HOH
1604
4
HOH
HOH
1604
A
HOH
1605
4
HOH
HOH
1605
A
HOH
1608
4
HOH
HOH
1608
A
HOH
1609
4
HOH
HOH
1609
A
HOH
1610
4
HOH
HOH
1610
A
HOH
1616
4
HOH
HOH
1616
A
HOH
1618
4
HOH
HOH
1618
A
HOH
1620
4
HOH
HOH
1620
A
HOH
1621
4
HOH
HOH
1621
A
HOH
1622
4
HOH
HOH
1622
A
HOH
1624
4
HOH
HOH
1624
A
HOH
1629
4
HOH
HOH
1629
A
HOH
1630
4
HOH
HOH
1630
A
HOH
1633
4
HOH
HOH
1633
A
HOH
1635
4
HOH
HOH
1635
A
HOH
1636
4
HOH
HOH
1636
A
HOH
1638
4
HOH
HOH
1638
A
HOH
1639
4
HOH
HOH
1639
A
HOH
1641
4
HOH
HOH
1641
A
HOH
1642
4
HOH
HOH
1642
A
HOH
1647
4
HOH
HOH
1647
A
HOH
1648
4
HOH
HOH
1648
A
HOH
1650
4
HOH
HOH
1650
A
HOH
1651
4
HOH
HOH
1651
A
HOH
1653
4
HOH
HOH
1653
A
HOH
1656
4
HOH
HOH
1656
A
HOH
1657
4
HOH
HOH
1657
A
HOH
1002
4
HOH
HOH
1002
B
HOH
1003
4
HOH
HOH
1003
B
HOH
1004
4
HOH
HOH
1004
B
HOH
1005
4
HOH
HOH
1005
B
HOH
1008
4
HOH
HOH
1008
B
HOH
1009
4
HOH
HOH
1009
B
HOH
1015
4
HOH
HOH
1015
B
HOH
1018
4
HOH
HOH
1018
B
HOH
1019
4
HOH
HOH
1019
B
HOH
1021
4
HOH
HOH
1021
B
HOH
1022
4
HOH
HOH
1022
B
HOH
1023
4
HOH
HOH
1023
B
HOH
1027
4
HOH
HOH
1027
B
HOH
1028
4
HOH
HOH
1028
B
HOH
1029
4
HOH
HOH
1029
B
HOH
1030
4
HOH
HOH
1030
B
HOH
1031
4
HOH
HOH
1031
B
HOH
1034
4
HOH
HOH
1034
B
HOH
1035
4
HOH
HOH
1035
B
HOH
1036
4
HOH
HOH
1036
B
HOH
1040
4
HOH
HOH
1040
B
HOH
1041
4
HOH
HOH
1041
B
HOH
1042
4
HOH
HOH
1042
B
HOH
1047
4
HOH
HOH
1047
B
HOH
1050
4
HOH
HOH
1050
B
HOH
1051
4
HOH
HOH
1051
B
HOH
1054
4
HOH
HOH
1054
B
HOH
1055
4
HOH
HOH
1055
B
HOH
1059
4
HOH
HOH
1059
B
HOH
1060
4
HOH
HOH
1060
B
HOH
1061
4
HOH
HOH
1061
B
HOH
1062
4
HOH
HOH
1062
B
HOH
1063
4
HOH
HOH
1063
B
HOH
1064
4
HOH
HOH
1064
B
HOH
1065
4
HOH
HOH
1065
B
HOH
1067
4
HOH
HOH
1067
B
HOH
1071
4
HOH
HOH
1071
B
HOH
1074
4
HOH
HOH
1074
B
HOH
1077
4
HOH
HOH
1077
B
HOH
1079
4
HOH
HOH
1079
B
HOH
1080
4
HOH
HOH
1080
B
HOH
1082
4
HOH
HOH
1082
B
HOH
1084
4
HOH
HOH
1084
B
HOH
1086
4
HOH
HOH
1086
B
HOH
1087
4
HOH
HOH
1087
B
HOH
1088
4
HOH
HOH
1088
B
HOH
1089
4
HOH
HOH
1089
B
HOH
1090
4
HOH
HOH
1090
B
HOH
1091
4
HOH
HOH
1091
B
HOH
1095
4
HOH
HOH
1095
B
HOH
1100
4
HOH
HOH
1100
B
HOH
1101
4
HOH
HOH
1101
B
HOH
1103
4
HOH
HOH
1103
B
HOH
1105
4
HOH
HOH
1105
B
HOH
1107
4
HOH
HOH
1107
B
HOH
1109
4
HOH
HOH
1109
B
HOH
1110
4
HOH
HOH
1110
B
HOH
1111
4
HOH
HOH
1111
B
HOH
1113
4
HOH
HOH
1113
B
HOH
1116
4
HOH
HOH
1116
B
HOH
1117
4
HOH
HOH
1117
B
HOH
1118
4
HOH
HOH
1118
B
HOH
1120
4
HOH
HOH
1120
B
HOH
1123
4
HOH
HOH
1123
B
HOH
1125
4
HOH
HOH
1125
B
HOH
1126
4
HOH
HOH
1126
B
HOH
1130
4
HOH
HOH
1130
B
HOH
1131
4
HOH
HOH
1131
B
HOH
1136
4
HOH
HOH
1136
B
HOH
1140
4
HOH
HOH
1140
B
HOH
1141
4
HOH
HOH
1141
B
HOH
1143
4
HOH
HOH
1143
B
HOH
1144
4
HOH
HOH
1144
B
HOH
1145
4
HOH
HOH
1145
B
HOH
1148
4
HOH
HOH
1148
B
HOH
1150
4
HOH
HOH
1150
B
HOH
1152
4
HOH
HOH
1152
B
HOH
1153
4
HOH
HOH
1153
B
HOH
1155
4
HOH
HOH
1155
B
HOH
1158
4
HOH
HOH
1158
B
HOH
1161
4
HOH
HOH
1161
B
HOH
1163
4
HOH
HOH
1163
B
HOH
1173
4
HOH
HOH
1173
B
HOH
1174
4
HOH
HOH
1174
B
HOH
1175
4
HOH
HOH
1175
B
HOH
1176
4
HOH
HOH
1176
B
HOH
1178
4
HOH
HOH
1178
B
HOH
1179
4
HOH
HOH
1179
B
HOH
1180
4
HOH
HOH
1180
B
HOH
1182
4
HOH
HOH
1182
B
HOH
1184
4
HOH
HOH
1184
B
HOH
1189
4
HOH
HOH
1189
B
HOH
1192
4
HOH
HOH
1192
B
HOH
1193
4
HOH
HOH
1193
B
HOH
1194
4
HOH
HOH
1194
B
HOH
1195
4
HOH
HOH
1195
B
HOH
1196
4
HOH
HOH
1196
B
HOH
1200
4
HOH
HOH
1200
B
HOH
1201
4
HOH
HOH
1201
B
HOH
1203
4
HOH
HOH
1203
B
HOH
1204
4
HOH
HOH
1204
B
HOH
1206
4
HOH
HOH
1206
B
HOH
1208
4
HOH
HOH
1208
B
HOH
1209
4
HOH
HOH
1209
B
HOH
1210
4
HOH
HOH
1210
B
HOH
1215
4
HOH
HOH
1215
B
HOH
1217
4
HOH
HOH
1217
B
HOH
1218
4
HOH
HOH
1218
B
HOH
1219
4
HOH
HOH
1219
B
HOH
1222
4
HOH
HOH
1222
B
HOH
1223
4
HOH
HOH
1223
B
HOH
1226
4
HOH
HOH
1226
B
HOH
1227
4
HOH
HOH
1227
B
HOH
1228
4
HOH
HOH
1228
B
HOH
1231
4
HOH
HOH
1231
B
HOH
1234
4
HOH
HOH
1234
B
HOH
1235
4
HOH
HOH
1235
B
HOH
1238
4
HOH
HOH
1238
B
HOH
1240
4
HOH
HOH
1240
B
HOH
1241
4
HOH
HOH
1241
B
HOH
1242
4
HOH
HOH
1242
B
HOH
1248
4
HOH
HOH
1248
B
HOH
1249
4
HOH
HOH
1249
B
HOH
1250
4
HOH
HOH
1250
B
HOH
1251
4
HOH
HOH
1251
B
HOH
1252
4
HOH
HOH
1252
B
HOH
1253
4
HOH
HOH
1253
B
HOH
1255
4
HOH
HOH
1255
B
HOH
1257
4
HOH
HOH
1257
B
HOH
1260
4
HOH
HOH
1260
B
HOH
1261
4
HOH
HOH
1261
B
HOH
1263
4
HOH
HOH
1263
B
HOH
1268
4
HOH
HOH
1268
B
HOH
1270
4
HOH
HOH
1270
B
HOH
1271
4
HOH
HOH
1271
B
HOH
1272
4
HOH
HOH
1272
B
HOH
1274
4
HOH
HOH
1274
B
HOH
1280
4
HOH
HOH
1280
B
HOH
1281
4
HOH
HOH
1281
B
HOH
1283
4
HOH
HOH
1283
B
HOH
1285
4
HOH
HOH
1285
B
HOH
1286
4
HOH
HOH
1286
B
HOH
1290
4
HOH
HOH
1290
B
HOH
1293
4
HOH
HOH
1293
B
HOH
1294
4
HOH
HOH
1294
B
HOH
1295
4
HOH
HOH
1295
B
HOH
1296
4
HOH
HOH
1296
B
HOH
1297
4
HOH
HOH
1297
B
HOH
1300
4
HOH
HOH
1300
B
HOH
1301
4
HOH
HOH
1301
B
HOH
1302
4
HOH
HOH
1302
B
HOH
1303
4
HOH
HOH
1303
B
HOH
1305
4
HOH
HOH
1305
B
HOH
1306
4
HOH
HOH
1306
B
HOH
1307
4
HOH
HOH
1307
B
HOH
1309
4
HOH
HOH
1309
B
HOH
1311
4
HOH
HOH
1311
B
HOH
1312
4
HOH
HOH
1312
B
HOH
1313
4
HOH
HOH
1313
B
HOH
1315
4
HOH
HOH
1315
B
HOH
1316
4
HOH
HOH
1316
B
HOH
1317
4
HOH
HOH
1317
B
HOH
1318
4
HOH
HOH
1318
B
HOH
1324
4
HOH
HOH
1324
B
HOH
1325
4
HOH
HOH
1325
B
HOH
1326
4
HOH
HOH
1326
B
HOH
1327
4
HOH
HOH
1327
B
HOH
1330
4
HOH
HOH
1330
B
HOH
1331
4
HOH
HOH
1331
B
HOH
1332
4
HOH
HOH
1332
B
HOH
1333
4
HOH
HOH
1333
B
HOH
1335
4
HOH
HOH
1335
B
HOH
1336
4
HOH
HOH
1336
B
HOH
1338
4
HOH
HOH
1338
B
HOH
1341
4
HOH
HOH
1341
B
HOH
1342
4
HOH
HOH
1342
B
HOH
1346
4
HOH
HOH
1346
B
HOH
1348
4
HOH
HOH
1348
B
HOH
1349
4
HOH
HOH
1349
B
HOH
1350
4
HOH
HOH
1350
B
HOH
1351
4
HOH
HOH
1351
B
HOH
1352
4
HOH
HOH
1352
B
HOH
1355
4
HOH
HOH
1355
B
HOH
1356
4
HOH
HOH
1356
B
HOH
1359
4
HOH
HOH
1359
B
HOH
1361
4
HOH
HOH
1361
B
HOH
1362
4
HOH
HOH
1362
B
HOH
1363
4
HOH
HOH
1363
B
HOH
1375
4
HOH
HOH
1375
B
HOH
1378
4
HOH
HOH
1378
B
HOH
1379
4
HOH
HOH
1379
B
HOH
1380
4
HOH
HOH
1380
B
HOH
1381
4
HOH
HOH
1381
B
HOH
1385
4
HOH
HOH
1385
B
HOH
1387
4
HOH
HOH
1387
B
HOH
1388
4
HOH
HOH
1388
B
HOH
1390
4
HOH
HOH
1390
B
HOH
1391
4
HOH
HOH
1391
B
HOH
1392
4
HOH
HOH
1392
B
HOH
1393
4
HOH
HOH
1393
B
HOH
1394
4
HOH
HOH
1394
B
HOH
1395
4
HOH
HOH
1395
B
HOH
1396
4
HOH
HOH
1396
B
HOH
1401
4
HOH
HOH
1401
B
HOH
1408
4
HOH
HOH
1408
B
HOH
1413
4
HOH
HOH
1413
B
HOH
1414
4
HOH
HOH
1414
B
HOH
1415
4
HOH
HOH
1415
B
HOH
1418
4
HOH
HOH
1418
B
HOH
1419
4
HOH
HOH
1419
B
HOH
1421
4
HOH
HOH
1421
B
HOH
1422
4
HOH
HOH
1422
B
HOH
1423
4
HOH
HOH
1423
B
HOH
1425
4
HOH
HOH
1425
B
HOH
1426
4
HOH
HOH
1426
B
HOH
1428
4
HOH
HOH
1428
B
HOH
1429
4
HOH
HOH
1429
B
HOH
1430
4
HOH
HOH
1430
B
HOH
1431
4
HOH
HOH
1431
B
HOH
1434
4
HOH
HOH
1434
B
HOH
1436
4
HOH
HOH
1436
B
HOH
1439
4
HOH
HOH
1439
B
HOH
1440
4
HOH
HOH
1440
B
HOH
1443
4
HOH
HOH
1443
B
HOH
1444
4
HOH
HOH
1444
B
HOH
1446
4
HOH
HOH
1446
B
HOH
1449
4
HOH
HOH
1449
B
HOH
1453
4
HOH
HOH
1453
B
HOH
1454
4
HOH
HOH
1454
B
HOH
1456
4
HOH
HOH
1456
B
HOH
1458
4
HOH
HOH
1458
B
HOH
1460
4
HOH
HOH
1460
B
HOH
1461
4
HOH
HOH
1461
B
HOH
1462
4
HOH
HOH
1462
B
HOH
1463
4
HOH
HOH
1463
B
HOH
1472
4
HOH
HOH
1472
B
HOH
1475
4
HOH
HOH
1475
B
HOH
1476
4
HOH
HOH
1476
B
HOH
1477
4
HOH
HOH
1477
B
HOH
1482
4
HOH
HOH
1482
B
HOH
1483
4
HOH
HOH
1483
B
HOH
1484
4
HOH
HOH
1484
B
HOH
1487
4
HOH
HOH
1487
B
HOH
1488
4
HOH
HOH
1488
B
HOH
1495
4
HOH
HOH
1495
B
HOH
1498
4
HOH
HOH
1498
B
HOH
1499
4
HOH
HOH
1499
B
HOH
1503
4
HOH
HOH
1503
B
HOH
1504
4
HOH
HOH
1504
B
HOH
1505
4
HOH
HOH
1505
B
HOH
1506
4
HOH
HOH
1506
B
HOH
1508
4
HOH
HOH
1508
B
HOH
1511
4
HOH
HOH
1511
B
HOH
1513
4
HOH
HOH
1513
B
HOH
1517
4
HOH
HOH
1517
B
HOH
1519
4
HOH
HOH
1519
B
HOH
1520
4
HOH
HOH
1520
B
HOH
1521
4
HOH
HOH
1521
B
HOH
1522
4
HOH
HOH
1522
B
HOH
1523
4
HOH
HOH
1523
B
HOH
1524
4
HOH
HOH
1524
B
HOH
1525
4
HOH
HOH
1525
B
HOH
1526
4
HOH
HOH
1526
B
HOH
1527
4
HOH
HOH
1527
B
HOH
1528
4
HOH
HOH
1528
B
HOH
1554
4
HOH
HOH
1554
B
HOH
1555
4
HOH
HOH
1555
B
HOH
1565
4
HOH
HOH
1565
B
HOH
1568
4
HOH
HOH
1568
B
HOH
1569
4
HOH
HOH
1569
B
HOH
1571
4
HOH
HOH
1571
B
HOH
1572
4
HOH
HOH
1572
B
HOH
1574
4
HOH
HOH
1574
B
HOH
1575
4
HOH
HOH
1575
B
HOH
1578
4
HOH
HOH
1578
B
HOH
1582
4
HOH
HOH
1582
B
HOH
1584
4
HOH
HOH
1584
B
HOH
1585
4
HOH
HOH
1585
B
HOH
1586
4
HOH
HOH
1586
B
HOH
1588
4
HOH
HOH
1588
B
HOH
1590
4
HOH
HOH
1590
B
HOH
1592
4
HOH
HOH
1592
B
HOH
1595
4
HOH
HOH
1595
B
HOH
1596
4
HOH
HOH
1596
B
HOH
1597
4
HOH
HOH
1597
B
HOH
1606
4
HOH
HOH
1606
B
HOH
1607
4
HOH
HOH
1607
B
HOH
1611
4
HOH
HOH
1611
B
HOH
1612
4
HOH
HOH
1612
B
HOH
1613
4
HOH
HOH
1613
B
HOH
1614
4
HOH
HOH
1614
B
HOH
1615
4
HOH
HOH
1615
B
HOH
1617
4
HOH
HOH
1617
B
HOH
1619
4
HOH
HOH
1619
B
HOH
1623
4
HOH
HOH
1623
B
HOH
1625
4
HOH
HOH
1625
B
HOH
1626
4
HOH
HOH
1626
B
HOH
1627
4
HOH
HOH
1627
B
HOH
1628
4
HOH
HOH
1628
B
HOH
1631
4
HOH
HOH
1631
B
HOH
1632
4
HOH
HOH
1632
B
HOH
1634
4
HOH
HOH
1634
B
HOH
1637
4
HOH
HOH
1637
B
HOH
1640
4
HOH
HOH
1640
B
HOH
1643
4
HOH
HOH
1643
B
HOH
1644
4
HOH
HOH
1644
B
HOH
1645
4
HOH
HOH
1645
B
HOH
1646
4
HOH
HOH
1646
B
HOH
1649
4
HOH
HOH
1649
B
HOH
1652
4
HOH
HOH
1652
B
HOH
1654
4
HOH
HOH
1654
B
HOH
1655
4
HOH
HOH
1655
B
PRO
1
n
1
PRO
1
A
GLN
2
n
2
GLN
2
A
ILE
3
n
3
ILE
3
A
THR
4
n
4
THR
4
A
LEU
5
n
5
LEU
5
A
TRP
6
n
6
TRP
6
A
LYS
7
n
7
LYS
7
A
ARG
8
n
8
ARG
8
A
PRO
9
n
9
PRO
9
A
LEU
10
n
10
LEU
10
A
VAL
11
n
11
VAL
11
A
THR
12
n
12
THR
12
A
ILE
13
n
13
ILE
13
A
LYS
14
n
14
LYS
14
A
ILE
15
n
15
ILE
15
A
GLY
16
n
16
GLY
16
A
GLY
17
n
17
GLY
17
A
GLN
18
n
18
GLN
18
A
LEU
19
n
19
LEU
19
A
LYS
20
n
20
LYS
20
A
GLU
21
n
21
GLU
21
A
ALA
22
n
22
ALA
22
A
LEU
23
n
23
LEU
23
A
LEU
24
n
24
LEU
24
A
ASP
25
n
25
ASP
25
A
THR
26
n
26
THR
26
A
GLY
27
n
27
GLY
27
A
ALA
28
n
28
ALA
28
A
ASP
29
n
29
ASP
29
A
ASP
30
n
30
ASP
30
A
THR
31
n
31
THR
31
A
VAL
32
n
32
VAL
32
A
ILE
33
n
33
ILE
33
A
GLU
34
n
34
GLU
34
A
GLU
35
n
35
GLU
35
A
MET
36
n
36
MET
36
A
SER
37
n
37
SER
37
A
LEU
38
n
38
LEU
38
A
PRO
39
n
39
PRO
39
A
GLY
40
n
40
GLY
40
A
ARG
41
n
41
ARG
41
A
TRP
42
n
42
TRP
42
A
LYS
43
n
43
LYS
43
A
PRO
44
n
44
PRO
44
A
LYS
45
n
45
LYS
45
A
MET
46
n
46
MET
46
A
ILE
47
n
47
ILE
47
A
GLY
48
n
48
GLY
48
A
GLY
49
n
49
GLY
49
A
ILE
50
n
50
ILE
50
A
GLY
51
n
51
GLY
51
A
GLY
52
n
52
GLY
52
A
PHE
53
n
53
PHE
53
A
ILE
54
n
54
ILE
54
A
LYS
55
n
55
LYS
55
A
VAL
56
n
56
VAL
56
A
ARG
57
n
57
ARG
57
A
GLN
58
n
58
GLN
58
A
TYR
59
n
59
TYR
59
A
ASP
60
n
60
ASP
60
A
GLN
61
n
61
GLN
61
A
ILE
62
n
62
ILE
62
A
ILE
63
n
63
ILE
63
A
ILE
64
n
64
ILE
64
A
GLU
65
n
65
GLU
65
A
ILE
66
n
66
ILE
66
A
ALA
67
n
67
ALA
67
A
GLY
68
n
68
GLY
68
A
HIS
69
n
69
HIS
69
A
LYS
70
n
70
LYS
70
A
ALA
71
n
71
ALA
71
A
ILE
72
n
72
ILE
72
A
GLY
73
n
73
GLY
73
A
THR
74
n
74
THR
74
A
VAL
75
n
75
VAL
75
A
LEU
76
n
76
LEU
76
A
VAL
77
n
77
VAL
77
A
GLY
78
n
78
GLY
78
A
PRO
79
n
79
PRO
79
A
THR
80
n
80
THR
80
A
PRO
81
n
81
PRO
81
A
VAL
82
n
82
VAL
82
A
ASN
83
n
83
ASN
83
A
ILE
84
n
84
ILE
84
A
ILE
85
n
85
ILE
85
A
GLY
86
n
86
GLY
86
A
ARG
87
n
87
ARG
87
A
ASN
88
n
88
ASN
88
A
LEU
89
n
89
LEU
89
A
LEU
90
n
90
LEU
90
A
THR
91
n
91
THR
91
A
GLN
92
n
92
GLN
92
A
ILE
93
n
93
ILE
93
A
GLY
94
n
94
GLY
94
A
ALA
95
n
95
ALA
95
A
THR
96
n
96
THR
96
A
LEU
97
n
97
LEU
97
A
ASN
98
n
98
ASN
98
A
PHE
99
n
99
PHE
99
A
PRO
101
n
1
PRO
101
B
GLN
102
n
2
GLN
102
B
ILE
103
n
3
ILE
103
B
THR
104
n
4
THR
104
B
LEU
105
n
5
LEU
105
B
TRP
106
n
6
TRP
106
B
LYS
107
n
7
LYS
107
B
ARG
108
n
8
ARG
108
B
PRO
109
n
9
PRO
109
B
LEU
110
n
10
LEU
110
B
VAL
111
n
11
VAL
111
B
THR
112
n
12
THR
112
B
ILE
113
n
13
ILE
113
B
LYS
114
n
14
LYS
114
B
ILE
115
n
15
ILE
115
B
GLY
116
n
16
GLY
116
B
GLY
117
n
17
GLY
117
B
GLN
118
n
18
GLN
118
B
LEU
119
n
19
LEU
119
B
LYS
120
n
20
LYS
120
B
GLU
121
n
21
GLU
121
B
ALA
122
n
22
ALA
122
B
LEU
123
n
23
LEU
123
B
LEU
124
n
24
LEU
124
B
ASP
125
n
25
ASP
125
B
THR
126
n
26
THR
126
B
GLY
127
n
27
GLY
127
B
ALA
128
n
28
ALA
128
B
ASP
129
n
29
ASP
129
B
ASP
130
n
30
ASP
130
B
THR
131
n
31
THR
131
B
VAL
132
n
32
VAL
132
B
ILE
133
n
33
ILE
133
B
GLU
134
n
34
GLU
134
B
GLU
135
n
35
GLU
135
B
MET
136
n
36
MET
136
B
SER
137
n
37
SER
137
B
LEU
138
n
38
LEU
138
B
PRO
139
n
39
PRO
139
B
GLY
140
n
40
GLY
140
B
ARG
141
n
41
ARG
141
B
TRP
142
n
42
TRP
142
B
LYS
143
n
43
LYS
143
B
PRO
144
n
44
PRO
144
B
LYS
145
n
45
LYS
145
B
MET
146
n
46
MET
146
B
ILE
147
n
47
ILE
147
B
GLY
148
n
48
GLY
148
B
GLY
149
n
49
GLY
149
B
ILE
150
n
50
ILE
150
B
GLY
151
n
51
GLY
151
B
GLY
152
n
52
GLY
152
B
PHE
153
n
53
PHE
153
B
ILE
154
n
54
ILE
154
B
LYS
155
n
55
LYS
155
B
VAL
156
n
56
VAL
156
B
ARG
157
n
57
ARG
157
B
GLN
158
n
58
GLN
158
B
TYR
159
n
59
TYR
159
B
ASP
160
n
60
ASP
160
B
GLN
161
n
61
GLN
161
B
ILE
162
n
62
ILE
162
B
ILE
163
n
63
ILE
163
B
ILE
164
n
64
ILE
164
B
GLU
165
n
65
GLU
165
B
ILE
166
n
66
ILE
166
B
ALA
167
n
67
ALA
167
B
GLY
168
n
68
GLY
168
B
HIS
169
n
69
HIS
169
B
LYS
170
n
70
LYS
170
B
ALA
171
n
71
ALA
171
B
ILE
172
n
72
ILE
172
B
GLY
173
n
73
GLY
173
B
THR
174
n
74
THR
174
B
VAL
175
n
75
VAL
175
B
LEU
176
n
76
LEU
176
B
VAL
177
n
77
VAL
177
B
GLY
178
n
78
GLY
178
B
PRO
179
n
79
PRO
179
B
THR
180
n
80
THR
180
B
PRO
181
n
81
PRO
181
B
VAL
182
n
82
VAL
182
B
ASN
183
n
83
ASN
183
B
ILE
184
n
84
ILE
184
B
ILE
185
n
85
ILE
185
B
GLY
186
n
86
GLY
186
B
ARG
187
n
87
ARG
187
B
ASN
188
n
88
ASN
188
B
LEU
189
n
89
LEU
189
B
LEU
190
n
90
LEU
190
B
THR
191
n
91
THR
191
B
GLN
192
n
92
GLN
192
B
ILE
193
n
93
ILE
193
B
GLY
194
n
94
GLY
194
B
ALA
195
n
95
ALA
195
B
THR
196
n
96
THR
196
B
LEU
197
n
97
LEU
197
B
ASN
198
n
98
ASN
198
B
PHE
199
n
99
PHE
199
B
author_and_software_defined_assembly
PISA
2
dimeric
4150
-22
9600
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
3
A
N
ILE
3
B
O
LEU
197
B
O
LEU
97
B
O
THR
196
B
O
THR
96
A
N
ASN
98
A
N
ASN
98
A
N
LEU
97
A
N
LEU
97
B
O
ILE
103
B
O
ILE
3
A
N
LYS
43
A
N
LYS
43
A
O
GLN
58
A
O
GLN
58
A
N
ILE
64
A
N
ILE
64
A
O
ALA
71
A
O
ALA
71
A
O
LEU
76
A
O
LEU
76
A
N
ILE
33
A
N
ILE
33
A
N
VAL
32
A
N
VAL
32
A
O
ILE
84
A
O
ILE
84
A
O
ILE
85
A
O
ILE
85
A
N
LEU
23
A
N
LEU
23
A
O
LYS
20
A
O
LYS
20
A
N
ILE
13
A
N
ILE
13
A
N
LYS
14
A
N
LYS
14
A
O
GLU
65
A
O
GLU
65
B
N
GLY
149
B
N
GLY
49
B
O
GLY
152
B
O
GLY
52
B
N
ILE
166
B
N
ILE
66
B
O
HIS
169
B
O
HIS
69
B
O
LEU
176
B
O
LEU
76
B
N
ILE
133
B
N
ILE
33
B
N
VAL
132
B
N
VAL
32
B
O
ILE
184
B
O
ILE
84
B
O
ILE
185
B
O
ILE
85
B
N
LEU
123
B
N
LEU
23
B
O
LYS
120
B
O
LYS
20
B
N
ILE
113
B
N
ILE
13
B
N
LYS
114
B
N
LYS
14
B
O
GLU
165
B
O
GLU
65
1
B
HOH
1219
F
HOH
1
9.87
1.40
123.60
133.47
A
A
A
CD
NE
CZ
ARG
ARG
ARG
8
8
8
B
B
B
N
1
5.80
0.50
120.30
126.10
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
8
8
8
B
B
B
N
1
-6.05
0.50
120.30
114.25
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
8
8
8
B
B
B
N
1
12.54
1.90
123.30
135.84
A
A
A
OD1
CG
OD2
ASP
ASP
ASP
25
25
25
B
B
B
N
1
-6.63
0.90
118.30
111.67
A
A
A
CB
CG
OD1
ASP
ASP
ASP
25
25
25
B
B
B
N
1
-5.89
0.90
118.30
112.41
A
A
A
CB
CG
OD2
ASP
ASP
ASP
25
25
25
B
B
B
N
1
-5.48
0.90
118.30
112.82
A
A
A
CB
CG
OD2
ASP
ASP
ASP
30
30
30
A
A
A
N
1
5.25
0.50
120.30
125.55
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
41
41
41
N
1
-15.85
1.60
100.20
84.35
A
A
A
CG
SD
CE
MET
MET
MET
46
46
46
A
A
A
N
1
10.87
1.60
100.20
111.07
A
A
A
CG
SD
CE
MET
MET
MET
46
46
46
B
B
B
N
1
11.53
1.50
110.10
121.63
A
A
A
CB
CA
C
ALA
ALA
ALA
67
67
67
B
B
B
N
1
-11.14
1.40
110.10
98.96
A
A
A
N
CA
CB
ALA
ALA
ALA
67
67
67
B
B
B
N
1
12.83
1.90
110.20
123.03
A
A
A
CB
CA
C
LEU
LEU
LEU
97
97
97
B
B
N
1
-12.66
2.00
121.60
108.94
B
B
B
CG
CD
OE1
GLN
GLN
GLN
102
102
102
N
1
24.13
2.40
116.70
140.83
B
B
B
CG
CD
NE2
GLN
GLN
GLN
102
102
102
N
1
-4.15
0.50
120.30
116.15
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
108
108
108
N
1
-13.16
2.00
111.60
98.44
B
B
B
CB
CA
C
ILE
ILE
ILE
115
115
115
A
A
A
N
1
8.76
0.90
118.30
127.06
B
B
B
CB
CG
OD1
ASP
ASP
ASP
130
130
130
B
B
B
N
1
16.45
2.20
111.40
127.85
B
B
B
CG1
CB
CG2
ILE
ILE
ILE
133
133
133
A
A
N
1
-12.69
2.00
110.90
98.21
B
B
B
CA
CB
CG2
ILE
ILE
ILE
133
133
133
A
N
1
15.40
2.20
113.40
128.80
B
B
B
CA
CB
CG
LYS
LYS
LYS
143
143
143
B
N
1
B
PRO
179
A
-72.55
48.39
0.118
0.101
0.101
0.88
50.0
169747
random
1
0.0
FOURIER SYNTHESIS
0.88
50.0
632
2190
46
0
1512
0.88
50.0
3A2O
169767
0.0
0.071
1
8.4
92.2
0.335
0.88
0.91
2.5
14309
1
3.2
refinement
SHELXL-97
data reduction
HKL-2000
data scaling
SCALEPACK
Crystal Structure of HIV-1 Protease Complexed with KNI-1689
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLY
86
A
GLY
86
HELX_P
A
THR
91
A
THR
91
1
1
6
B
GLY
186
B
GLY
86
HELX_P
B
THR
191
B
THR
91
1
2
6
HYDROLASE/HYDROLASE INHIBITOR
HIV-1 protease, Inhibitor, Aspartyl protease, Hydrolase, Protease, HYDROLASE-HYDROLASE INHIBITOR complex
Q9EKL4_9HIV1
UNP
1
1
Q9EKL4
PQITLWQRPLVTIKIGGQLKEALLDTGADDTVVEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT
PVNIIGRNLLTQIGCTLNF
1
99
3A2O
1
99
Q9EKL4
A
1
1
99
1
99
3A2O
101
199
Q9EKL4
B
1
1
99
1
GLN
engineered mutation
LYS
7
3A2O
A
Q9EKL4
UNP
7
7
1
VAL
engineered mutation
ILE
33
3A2O
A
Q9EKL4
UNP
33
33
1
LEU
engineered mutation
ILE
63
3A2O
A
Q9EKL4
UNP
63
63
1
CYS
engineered mutation
ALA
67
3A2O
A
Q9EKL4
UNP
67
67
1
CYS
engineered mutation
ALA
95
3A2O
A
Q9EKL4
UNP
95
95
2
GLN
engineered mutation
LYS
107
3A2O
B
Q9EKL4
UNP
7
7
2
VAL
engineered mutation
ILE
133
3A2O
B
Q9EKL4
UNP
33
33
2
LEU
engineered mutation
ILE
163
3A2O
B
Q9EKL4
UNP
63
63
2
CYS
engineered mutation
ALA
167
3A2O
B
Q9EKL4
UNP
67
67
2
CYS
engineered mutation
ALA
195
3A2O
B
Q9EKL4
UNP
95
95
4
8
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
GLN
2
A
GLN
2
A
ILE
3
A
ILE
3
B
THR
196
B
THR
96
B
ASN
198
B
ASN
98
A
THR
96
A
THR
96
A
ASN
98
A
ASN
98
B
GLN
102
B
GLN
2
B
ILE
103
B
ILE
3
A
TRP
42
A
TRP
42
A
GLY
49
A
GLY
49
A
GLY
52
A
GLY
52
A
ILE
66
A
ILE
66
A
HIS
69
A
HIS
69
A
VAL
77
A
VAL
77
A
VAL
32
A
VAL
32
A
ILE
33
A
ILE
33
A
ILE
84
A
ILE
84
A
ILE
85
A
ILE
85
A
GLN
18
A
GLN
18
A
LEU
24
A
LEU
24
A
LEU
10
A
LEU
10
A
ILE
15
A
ILE
15
A
GLY
52
A
GLY
52
A
ILE
66
A
ILE
66
B
LYS
143
B
LYS
43
B
GLY
149
B
GLY
49
B
GLY
152
B
GLY
52
B
ILE
166
B
ILE
66
B
HIS
169
B
HIS
69
B
VAL
177
B
VAL
77
B
VAL
132
B
VAL
32
B
ILE
133
B
ILE
33
B
ILE
184
B
ILE
84
B
ILE
185
B
ILE
85
B
GLN
118
B
GLN
18
B
LEU
124
B
LEU
24
B
LEU
110
B
LEU
10
B
ILE
115
B
ILE
15
B
GLY
152
B
GLY
52
B
ILE
166
B
ILE
66
BINDING SITE FOR RESIDUE GOL B 803
B
GOL
803
Software
15
BINDING SITE FOR RESIDUE KNJ B 999
B
KNJ
999
Software
42
A
GLN
18
A
GLN
18
15
1_556
A
MET
36
A
MET
36
15
1_556
A
SER
37
A
SER
37
15
1_556
B
THR
112
B
THR
12
15
1_555
B
ILE
113
B
ILE
13
15
1_555
B
LYS
114
B
LYS
14
15
1_555
B
GLU
165
B
GLU
65
15
1_555
B
ILE
166
B
ILE
66
15
1_555
B
ALA
167
B
ALA
67
15
1_555
B
GLY
168
B
GLY
68
15
1_555
B
HOH
1477
F
HOH
15
1_555
B
HOH
1643
F
HOH
15
1_555
B
HOH
1644
F
HOH
15
1_555
B
HOH
1645
F
HOH
15
1_555
B
HOH
1646
F
HOH
15
1_555
A
LEU
23
A
LEU
23
42
1_555
A
ASP
25
A
ASP
25
42
1_555
A
GLY
27
A
GLY
27
42
1_555
A
ALA
28
A
ALA
28
42
1_555
A
ASP
29
A
ASP
29
42
1_555
A
ASP
30
A
ASP
30
42
1_555
A
VAL
32
A
VAL
32
42
1_555
A
GLY
48
A
GLY
48
42
1_555
A
GLY
49
A
GLY
49
42
1_555
A
ILE
50
A
ILE
50
42
1_555
A
VAL
82
A
VAL
82
42
1_555
A
ILE
84
A
ILE
84
42
1_555
A
HOH
1039
E
HOH
42
1_555
A
HOH
1433
E
HOH
42
1_555
A
HOH
1445
E
HOH
42
1_555
A
HOH
1598
E
HOH
42
1_555
A
HOH
1638
E
HOH
42
1_555
A
HOH
1639
E
HOH
42
1_555
A
HOH
1648
E
HOH
42
1_555
A
HOH
1657
E
HOH
42
1_555
B
LEU
123
B
LEU
23
42
1_555
B
ASP
125
B
ASP
25
42
1_555
B
GLY
127
B
GLY
27
42
1_555
B
ALA
128
B
ALA
28
42
1_555
B
ASP
129
B
ASP
29
42
1_555
B
ASP
130
B
ASP
30
42
1_555
B
VAL
132
B
VAL
32
42
1_555
B
ILE
147
B
ILE
47
42
1_555
B
GLY
148
B
GLY
48
42
1_555
B
GLY
149
B
GLY
49
42
1_555
B
ILE
150
B
ILE
50
42
1_555
B
PRO
181
B
PRO
81
42
1_555
B
ILE
184
B
ILE
84
42
1_555
B
HOH
1079
F
HOH
42
1_555
B
HOH
1095
F
HOH
42
1_555
B
HOH
1472
F
HOH
42
1_555
B
HOH
1568
F
HOH
42
1_555
B
HOH
1571
F
HOH
42
1_555
B
HOH
1595
F
HOH
42
1_555
B
HOH
1596
F
HOH
42
1_555
B
HOH
1654
F
HOH
42
1_555
B
HOH
1655
F
HOH
42
1_555
18
P 21 21 2