0.013671
0.007893
0.000000
0.000000
0.015786
0.000000
0.000000
0.000000
0.005547
0.00000
0.00000
0.00000
Satoh, T.
Chen, Y.
Hu, D.
Hanashima, S.
Yamamoto, K.
Yamaguchi, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
120.00
73.1
73.1
180.3
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-mannopyranose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
D-saccharide, alpha linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Mol.Cell
MOCEFL
2168
1097-2765
40
905
916
10.1016/j.molcel.2010.11.017
21172656
Structural Basis for Oligosaccharide Recognition of Misfolded Glycoproteins by OS-9 in ER-Associated Degradation
2010
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-08-12
ADSC QUANTUM 315
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BL13B1
NSRRC
1.0000
SYNCHROTRON
NSRRC BEAMLINE BL13B1
14420.070
Protein OS-9
MRH domain
2
man
polymer
504.438
alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose
2
man
branched
18.015
water
79
nat
water
Amplified in osteosarcoma 9
no
no
GSAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSKCDLNG
RPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCP
GSAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSKCDLNG
RPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCP
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
OS9
9606
Homo sapiens
562
Escherichia coli
Rosetta2(DE3)pLysS
plasmid
pCold-I (MBP fusion)
1
2.41
48.98
VAPOR DIFFUSION, HANGING DROP
7.5
1.9M ammonium sulfate, 0.1M Tris-HCl, 2% PEG400, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 303K
303
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_special_symmetry
pdbx_unobs_or_zero_occ_atoms
pdbx_validate_symm_contact
struct_asym
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Atomic model
Derived calculations
Advisory
Atomic model
Data collection
Database references
Derived calculations
Structure summary
1
0
2010-12-22
1
1
2011-07-13
1
2
2014-12-17
2
0
2020-07-29
_atom_site.auth_asym_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_validate_symm_contact.auth_asym_id_2
_pdbx_validate_symm_contact.auth_seq_id_2
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
A
BMA
300
n
C
BMA
1
A
MAN
301
n
C
MAN
2
A
MAN
302
n
C
MAN
3
B
BMA
300
n
D
BMA
1
B
MAN
301
n
D
MAN
2
B
MAN
302
n
D
MAN
3
DManpb
b-D-mannopyranose
b-D-Manp
Man
DManpa
a-D-mannopyranose
a-D-Manp
Man
PDBJ
Y
PDBJ
2010-05-14
REL
REL
oligosaccharide
DManpa1-6DManpa1-6DManpb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,3,2/[a1122h-1b_1-5][a1122h-1a_1-5]/1-2-2/a6-b1_b6-c1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Manp]{[(6+1)][a-D-Manp]{[(6+1)][a-D-Manp]{}}}
2
PDB-CARE
LINUCS
C1
O6
MAN
BMA
2
1
2
O1
HO6
sing
C1
O6
MAN
MAN
3
2
2
O1
HO6
sing
n
n
n
HOH
water
THE MODELS ARE BASED ON SOLUTION NMR ANALYSES.
HOH
1
3
HOH
HOH
1
A
HOH
2
3
HOH
HOH
2
A
HOH
5
3
HOH
HOH
5
A
HOH
8
3
HOH
HOH
8
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
12
3
HOH
HOH
12
A
HOH
13
3
HOH
HOH
13
A
HOH
14
3
HOH
HOH
14
A
HOH
15
3
HOH
HOH
15
A
HOH
16
3
HOH
HOH
16
A
HOH
17
3
HOH
HOH
17
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
22
3
HOH
HOH
22
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
30
3
HOH
HOH
30
A
HOH
33
3
HOH
HOH
33
A
HOH
35
3
HOH
HOH
35
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
39
3
HOH
HOH
39
A
HOH
40
3
HOH
HOH
40
A
HOH
42
3
HOH
HOH
42
A
HOH
45
3
HOH
HOH
45
A
HOH
47
3
HOH
HOH
47
A
HOH
49
3
HOH
HOH
49
A
HOH
50
3
HOH
HOH
50
A
HOH
51
3
HOH
HOH
51
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
60
3
HOH
HOH
60
A
HOH
62
3
HOH
HOH
62
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
65
3
HOH
HOH
65
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
68
3
HOH
HOH
68
A
HOH
69
3
HOH
HOH
69
A
HOH
70
3
HOH
HOH
70
A
HOH
71
3
HOH
HOH
71
A
HOH
73
3
HOH
HOH
73
A
HOH
74
3
HOH
HOH
74
A
HOH
75
3
HOH
HOH
75
A
HOH
77
3
HOH
HOH
77
A
HOH
78
3
HOH
HOH
78
A
HOH
79
3
HOH
HOH
79
A
HOH
3
3
HOH
HOH
3
B
HOH
4
3
HOH
HOH
4
B
HOH
6
3
HOH
HOH
6
B
HOH
7
3
HOH
HOH
7
B
HOH
9
3
HOH
HOH
9
B
HOH
27
3
HOH
HOH
27
B
HOH
31
3
HOH
HOH
31
B
HOH
32
3
HOH
HOH
32
B
HOH
34
3
HOH
HOH
34
B
HOH
38
3
HOH
HOH
38
B
HOH
41
3
HOH
HOH
41
B
HOH
43
3
HOH
HOH
43
B
HOH
44
3
HOH
HOH
44
B
HOH
46
3
HOH
HOH
46
B
HOH
48
3
HOH
HOH
48
B
HOH
52
3
HOH
HOH
52
B
HOH
55
3
HOH
HOH
55
B
HOH
56
3
HOH
HOH
56
B
HOH
57
3
HOH
HOH
57
B
HOH
58
3
HOH
HOH
58
B
HOH
59
3
HOH
HOH
59
B
HOH
61
3
HOH
HOH
61
B
HOH
72
3
HOH
HOH
72
B
HOH
76
3
HOH
HOH
76
B
n
1
106
A
n
2
107
A
n
3
108
A
PRO
109
n
4
PRO
109
A
CYS
110
n
5
CYS
110
A
LEU
111
n
6
LEU
111
A
LEU
112
n
7
LEU
112
A
LYS
113
n
8
LYS
113
A
THR
114
n
9
THR
114
A
LYS
115
n
10
LYS
115
A
ASP
116
n
11
ASP
116
A
TRP
117
n
12
TRP
117
A
TRP
118
n
13
TRP
118
A
THR
119
n
14
THR
119
A
TYR
120
n
15
TYR
120
A
GLU
121
n
16
GLU
121
A
PHE
122
n
17
PHE
122
A
CYS
123
n
18
CYS
123
A
TYR
124
n
19
TYR
124
A
GLY
125
n
20
GLY
125
A
ARG
126
n
21
ARG
126
A
HIS
127
n
22
HIS
127
A
ILE
128
n
23
ILE
128
A
GLN
129
n
24
GLN
129
A
GLN
130
n
25
GLN
130
A
TYR
131
n
26
TYR
131
A
HIS
132
n
27
HIS
132
A
MET
133
n
28
MET
133
A
GLU
134
n
29
GLU
134
A
ASP
135
n
30
ASP
135
A
SER
136
n
31
SER
136
A
GLU
137
n
32
GLU
137
A
ILE
138
n
33
ILE
138
A
LYS
139
n
34
LYS
139
A
GLY
140
n
35
GLY
140
A
GLU
141
n
36
GLU
141
A
VAL
142
n
37
VAL
142
A
LEU
143
n
38
LEU
143
A
TYR
144
n
39
TYR
144
A
LEU
145
n
40
LEU
145
A
GLY
146
n
41
GLY
146
A
TYR
147
n
42
TYR
147
A
TYR
148
n
43
TYR
148
A
GLN
149
n
44
GLN
149
A
SER
150
n
45
SER
150
A
ALA
151
n
46
ALA
151
A
PHE
152
n
47
PHE
152
A
ASP
153
n
48
ASP
153
A
TRP
154
n
49
TRP
154
A
ASP
155
n
50
ASP
155
A
ASP
156
n
51
ASP
156
A
n
52
157
A
n
53
158
A
n
54
159
A
n
55
160
A
n
56
161
A
n
57
162
A
n
58
163
A
n
59
164
A
n
60
165
A
n
61
166
A
n
62
167
A
LYS
168
n
63
LYS
168
A
ARG
169
n
64
ARG
169
A
TYR
170
n
65
TYR
170
A
HIS
171
n
66
HIS
171
A
SER
172
n
67
SER
172
A
GLN
173
n
68
GLN
173
A
THR
174
n
69
THR
174
A
TYR
175
n
70
TYR
175
A
GLY
176
n
71
GLY
176
A
ASN
177
n
72
ASN
177
A
GLY
178
n
73
GLY
178
A
SER
179
n
74
SER
179
A
LYS
180
n
75
LYS
180
A
CYS
181
n
76
CYS
181
A
ASP
182
n
77
ASP
182
A
LEU
183
n
78
LEU
183
A
ASN
184
n
79
ASN
184
A
GLY
185
n
80
GLY
185
A
ARG
186
n
81
ARG
186
A
PRO
187
n
82
PRO
187
A
ARG
188
n
83
ARG
188
A
GLU
189
n
84
GLU
189
A
ALA
190
n
85
ALA
190
A
GLU
191
n
86
GLU
191
A
VAL
192
n
87
VAL
192
A
ARG
193
n
88
ARG
193
A
PHE
194
n
89
PHE
194
A
LEU
195
n
90
LEU
195
A
CYS
196
n
91
CYS
196
A
ASP
197
n
92
ASP
197
A
GLU
198
n
93
GLU
198
A
GLY
199
n
94
GLY
199
A
ALA
200
n
95
ALA
200
A
GLY
201
n
96
GLY
201
A
ILE
202
n
97
ILE
202
A
SER
203
n
98
SER
203
A
GLY
204
n
99
GLY
204
A
ASP
205
n
100
ASP
205
A
TYR
206
n
101
TYR
206
A
ILE
207
n
102
ILE
207
A
ASP
208
n
103
ASP
208
A
ARG
209
n
104
ARG
209
A
VAL
210
n
105
VAL
210
A
ASP
211
n
106
ASP
211
A
GLU
212
n
107
GLU
212
A
PRO
213
n
108
PRO
213
A
LEU
214
n
109
LEU
214
A
SER
215
n
110
SER
215
A
CYS
216
n
111
CYS
216
A
SER
217
n
112
SER
217
A
TYR
218
n
113
TYR
218
A
VAL
219
n
114
VAL
219
A
LEU
220
n
115
LEU
220
A
THR
221
n
116
THR
221
A
ILE
222
n
117
ILE
222
A
ARG
223
n
118
ARG
223
A
THR
224
n
119
THR
224
A
PRO
225
n
120
PRO
225
A
ARG
226
n
121
ARG
226
A
LEU
227
n
122
LEU
227
A
CYS
228
n
123
CYS
228
A
PRO
229
n
124
PRO
229
A
n
1
106
B
n
2
107
B
n
3
108
B
PRO
109
n
4
PRO
109
B
CYS
110
n
5
CYS
110
B
LEU
111
n
6
LEU
111
B
LEU
112
n
7
LEU
112
B
LYS
113
n
8
LYS
113
B
THR
114
n
9
THR
114
B
LYS
115
n
10
LYS
115
B
ASP
116
n
11
ASP
116
B
TRP
117
n
12
TRP
117
B
TRP
118
n
13
TRP
118
B
THR
119
n
14
THR
119
B
TYR
120
n
15
TYR
120
B
GLU
121
n
16
GLU
121
B
PHE
122
n
17
PHE
122
B
CYS
123
n
18
CYS
123
B
TYR
124
n
19
TYR
124
B
GLY
125
n
20
GLY
125
B
ARG
126
n
21
ARG
126
B
HIS
127
n
22
HIS
127
B
ILE
128
n
23
ILE
128
B
GLN
129
n
24
GLN
129
B
GLN
130
n
25
GLN
130
B
TYR
131
n
26
TYR
131
B
HIS
132
n
27
HIS
132
B
MET
133
n
28
MET
133
B
GLU
134
n
29
GLU
134
B
ASP
135
n
30
ASP
135
B
SER
136
n
31
SER
136
B
GLU
137
n
32
GLU
137
B
ILE
138
n
33
ILE
138
B
LYS
139
n
34
LYS
139
B
GLY
140
n
35
GLY
140
B
GLU
141
n
36
GLU
141
B
VAL
142
n
37
VAL
142
B
LEU
143
n
38
LEU
143
B
TYR
144
n
39
TYR
144
B
LEU
145
n
40
LEU
145
B
GLY
146
n
41
GLY
146
B
TYR
147
n
42
TYR
147
B
TYR
148
n
43
TYR
148
B
GLN
149
n
44
GLN
149
B
SER
150
n
45
SER
150
B
ALA
151
n
46
ALA
151
B
PHE
152
n
47
PHE
152
B
ASP
153
n
48
ASP
153
B
TRP
154
n
49
TRP
154
B
ASP
155
n
50
ASP
155
B
ASP
156
n
51
ASP
156
B
n
52
157
B
n
53
158
B
n
54
159
B
n
55
160
B
n
56
161
B
n
57
162
B
n
58
163
B
GLN
164
n
59
GLN
164
B
HIS
165
n
60
HIS
165
B
ARG
166
n
61
ARG
166
B
LEU
167
n
62
LEU
167
B
LYS
168
n
63
LYS
168
B
ARG
169
n
64
ARG
169
B
TYR
170
n
65
TYR
170
B
HIS
171
n
66
HIS
171
B
SER
172
n
67
SER
172
B
GLN
173
n
68
GLN
173
B
THR
174
n
69
THR
174
B
TYR
175
n
70
TYR
175
B
GLY
176
n
71
GLY
176
B
ASN
177
n
72
ASN
177
B
GLY
178
n
73
GLY
178
B
SER
179
n
74
SER
179
B
LYS
180
n
75
LYS
180
B
CYS
181
n
76
CYS
181
B
ASP
182
n
77
ASP
182
B
LEU
183
n
78
LEU
183
B
ASN
184
n
79
ASN
184
B
GLY
185
n
80
GLY
185
B
ARG
186
n
81
ARG
186
B
PRO
187
n
82
PRO
187
B
ARG
188
n
83
ARG
188
B
GLU
189
n
84
GLU
189
B
ALA
190
n
85
ALA
190
B
GLU
191
n
86
GLU
191
B
VAL
192
n
87
VAL
192
B
ARG
193
n
88
ARG
193
B
PHE
194
n
89
PHE
194
B
LEU
195
n
90
LEU
195
B
CYS
196
n
91
CYS
196
B
ASP
197
n
92
ASP
197
B
n
93
198
B
n
94
199
B
ALA
200
n
95
ALA
200
B
GLY
201
n
96
GLY
201
B
ILE
202
n
97
ILE
202
B
SER
203
n
98
SER
203
B
GLY
204
n
99
GLY
204
B
ASP
205
n
100
ASP
205
B
TYR
206
n
101
TYR
206
B
ILE
207
n
102
ILE
207
B
ASP
208
n
103
ASP
208
B
ARG
209
n
104
ARG
209
B
VAL
210
n
105
VAL
210
B
ASP
211
n
106
ASP
211
B
GLU
212
n
107
GLU
212
B
PRO
213
n
108
PRO
213
B
LEU
214
n
109
LEU
214
B
SER
215
n
110
SER
215
B
CYS
216
n
111
CYS
216
B
SER
217
n
112
SER
217
B
TYR
218
n
113
TYR
218
B
VAL
219
n
114
VAL
219
B
LEU
220
n
115
LEU
220
B
THR
221
n
116
THR
221
B
ILE
222
n
117
ILE
222
B
ARG
223
n
118
ARG
223
B
THR
224
n
119
THR
224
B
PRO
225
n
120
PRO
225
B
ARG
226
n
121
ARG
226
B
LEU
227
n
122
LEU
227
B
CYS
228
n
123
CYS
228
B
n
124
229
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
113
A
N
LYS
8
A
O
TYR
120
A
O
TYR
15
A
N
THR
119
A
N
THR
14
A
O
TYR
131
A
O
TYR
26
A
N
GLN
130
A
N
GLN
25
A
O
LEU
143
A
O
LEU
38
A
N
TRP
154
A
N
TRP
49
A
O
TYR
170
A
O
TYR
65
A
N
TYR
175
A
N
TYR
70
A
O
ALA
190
A
O
ALA
85
A
N
ARG
193
A
N
ARG
88
A
O
LEU
220
A
O
LEU
115
A
O
VAL
219
A
O
VAL
114
A
N
ASP
211
A
N
ASP
106
A
N
GLU
134
A
N
GLU
29
A
O
GLU
137
A
O
GLU
32
B
N
LYS
113
B
N
LYS
8
B
O
TYR
120
B
O
TYR
15
B
N
THR
119
B
N
THR
14
B
O
TYR
131
B
O
TYR
26
B
N
GLN
130
B
N
GLN
25
B
O
LEU
143
B
O
LEU
38
B
N
TRP
154
B
N
TRP
49
B
O
TYR
170
B
O
TYR
65
B
N
GLN
173
B
N
GLN
68
B
O
VAL
192
B
O
VAL
87
B
N
LEU
195
B
N
LEU
90
B
O
ILE
222
B
O
ILE
117
B
O
VAL
219
B
O
VAL
114
B
N
ASP
211
B
N
ASP
106
B
N
GLU
134
B
N
GLU
29
B
O
GLU
137
B
O
GLU
32
1
A
HOH
24
E
HOH
1
A
GLY
106
A
GLY
1
1
Y
1
A
SER
107
A
SER
2
1
Y
1
A
ALA
108
A
ALA
3
1
Y
1
A
GLU
157
A
GLU
52
1
Y
1
A
THR
158
A
THR
53
1
Y
1
A
ALA
159
A
ALA
54
1
Y
1
A
LYS
160
A
LYS
55
1
Y
1
A
ALA
161
A
ALA
56
1
Y
1
A
SER
162
A
SER
57
1
Y
1
A
LYS
163
A
LYS
58
1
Y
1
A
GLN
164
A
GLN
59
1
Y
1
A
HIS
165
A
HIS
60
1
Y
1
A
ARG
166
A
ARG
61
1
Y
1
A
LEU
167
A
LEU
62
1
Y
1
B
GLY
106
B
GLY
1
1
Y
1
B
SER
107
B
SER
2
1
Y
1
B
ALA
108
B
ALA
3
1
Y
1
B
GLU
157
B
GLU
52
1
Y
1
B
THR
158
B
THR
53
1
Y
1
B
ALA
159
B
ALA
54
1
Y
1
B
LYS
160
B
LYS
55
1
Y
1
B
ALA
161
B
ALA
56
1
Y
1
B
SER
162
B
SER
57
1
Y
1
B
LYS
163
B
LYS
58
1
Y
1
B
GLU
198
B
GLU
93
1
Y
1
B
GLY
199
B
GLY
94
1
Y
1
B
PRO
229
B
PRO
124
1
Y
1
A
A
ASP
ASP
155
156
144.15
1
-3.09
0.50
120.30
117.21
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
193
193
193
N
1
A
A
O
O
HOH
HOH
18
18
1.18
1_555
12_555
1
A
D
CE2
O3
TRP
BMA
117
1
1.43
1_555
8_565
1
A
D
NE1
O3
TRP
BMA
117
1
1.47
1_555
8_565
1
B
C
CE2
O3
TRP
BMA
117
1
1.63
1_555
8_665
1
A
D
CZ2
O3
TRP
BMA
117
1
1.85
1_555
8_565
1
B
C
NE1
O3
TRP
BMA
117
1
1.87
1_555
8_665
1
B
C
CZ2
O3
TRP
BMA
117
1
2.13
1_555
8_665
1
A
ASP
116
47.03
-112.57
1
A
ARG
126
-129.07
-73.58
1
A
ASP
135
68.28
-78.09
1
A
SER
136
-162.94
27.35
1
B
ASP
116
59.98
-125.21
1
B
ARG
126
-126.79
-63.36
1
B
ASP
135
70.88
-104.58
1
B
SER
136
-145.65
44.76
1
B
GLN
149
-130.44
-43.67
31.263
-1.19
-0.59
0.00
-1.19
0.00
1.78
0.934
0.911
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.277
0.228
0.230
2.10
40.00
881
16555
16555
5.1
99.89
5.571
0.147
RANDOM
1
THROUGHOUT
SAD
0.204
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
MASK
2.10
40.00
79
1983
68
0
1836
0.018
0.021
1939
1.663
1.968
2626
7.276
5.000
216
31.427
22.981
104
18.231
15.000
310
17.291
15.000
17
0.123
0.200
271
0.008
0.021
1473
1.133
1.500
1092
2.103
2.000
1749
2.774
3.000
847
4.405
4.500
877
0.317
0.267
2.154
54
1205
20
100.00
30.3
2.1
50
3AIH
17542
17480
0.098
1
28.5
11.4
99.7
0.469
2.10
2.18
5.5
1694
1
11.7
100
data collection
HKL-2000
phasing
SHELXS
refinement
REFMAC
5.5.0102
data reduction
DENZO
data scaling
SCALEPACK
Protein OS-9
Human OS-9 MRH domain complexed with alpha3,alpha6-Man5
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
PRO
225
A
PRO
120
HELX_P
A
CYS
228
A
CYS
123
5
1
4
B
PRO
225
B
PRO
120
HELX_P
B
CYS
228
B
CYS
123
5
2
4
disulf
2.072
A
CYS
110
A
SG
CYS
5
1_555
A
CYS
123
A
SG
CYS
18
1_555
disulf
2.110
A
CYS
181
A
SG
CYS
76
1_555
A
CYS
216
A
SG
CYS
111
1_555
disulf
2.103
A
CYS
196
A
SG
CYS
91
1_555
A
CYS
228
A
SG
CYS
123
1_555
disulf
2.047
B
CYS
110
B
SG
CYS
5
1_555
B
CYS
123
B
SG
CYS
18
1_555
disulf
2.097
B
CYS
181
B
SG
CYS
76
1_555
B
CYS
216
B
SG
CYS
111
1_555
disulf
2.028
B
CYS
196
B
SG
CYS
91
1_555
B
CYS
228
B
SG
CYS
123
1_555
covale
1.427
both
C
BMA
1
C
O6
BMA
1_555
C
MAN
2
C
C1
MAN
1_555
covale
1.420
both
C
MAN
2
C
O6
MAN
1_555
C
MAN
3
C
C1
MAN
1_555
covale
1.414
both
D
BMA
1
D
O6
BMA
1_555
D
MAN
2
D
C1
MAN
1_555
covale
1.445
both
D
MAN
2
D
O6
MAN
1_555
D
MAN
3
D
C1
MAN
1_555
SUGAR BINDING PROTEIN
Beta barrel, Lectin, SUGAR BINDING PROTEIN
OS9_HUMAN
UNP
1
108
Q13438
APCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSKCDLNGRP
REAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCP
108
229
3AIH
108
229
Q13438
A
1
3
124
108
229
3AIH
108
229
Q13438
B
1
3
124
1
expression tag
GLY
106
3AIH
A
Q13438
UNP
1
1
expression tag
SER
107
3AIH
A
Q13438
UNP
2
2
expression tag
GLY
106
3AIH
B
Q13438
UNP
1
2
expression tag
SER
107
3AIH
B
Q13438
UNP
2
8
2
8
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
LEU
111
A
LEU
6
A
LYS
115
A
LYS
10
A
TRP
118
A
TRP
13
A
CYS
123
A
CYS
18
A
HIS
127
A
HIS
22
A
TYR
131
A
TYR
26
A
LEU
143
A
LEU
38
A
TRP
154
A
TRP
49
A
TYR
170
A
TYR
65
A
GLY
176
A
GLY
71
A
GLU
189
A
GLU
84
A
CYS
196
A
CYS
91
A
SER
217
A
SER
112
A
THR
224
A
THR
119
A
TYR
206
A
TYR
101
A
LEU
214
A
LEU
109
A
MET
133
A
MET
28
A
GLU
134
A
GLU
29
A
GLU
137
A
GLU
32
A
ILE
138
A
ILE
33
B
CYS
110
B
CYS
5
B
LYS
115
B
LYS
10
B
TRP
118
B
TRP
13
B
CYS
123
B
CYS
18
B
HIS
127
B
HIS
22
B
TYR
131
B
TYR
26
B
LEU
143
B
LEU
38
B
ASP
155
B
ASP
50
B
ARG
169
B
ARG
64
B
ASN
177
B
ASN
72
B
GLU
189
B
GLU
84
B
CYS
196
B
CYS
91
B
SER
217
B
SER
112
B
THR
224
B
THR
119
B
TYR
206
B
TYR
101
B
LEU
214
B
LEU
109
B
MET
133
B
MET
28
B
GLU
134
B
GLU
29
B
GLU
137
B
GLU
32
B
ILE
138
B
ILE
33
178
P 61 2 2