0.016505 0.000000 0.000000 0.000000 0.016130 0.000000 0.000000 0.000000 0.012230 0.00000 0.00000 0.00000 Wielens, J. Parker, M.W. Chalmers, D.K. Scanlon, M.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 60.587 61.997 81.765 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C7 H6 O3 138.121 1,3-benzodioxol-5-ol non-polymer Cd 2 112.411 CADMIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H Y 74 N C Y 75 N C Y 76 N C Y 77 N C Y 78 N C Y 79 N C N 80 N O N 81 N C N 82 N O N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N CD N 91 N N N 92 R C N 93 N C N 94 N O N 95 N C N 96 N S N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N N N 106 S C N 107 N C N 108 N O N 109 N C N 110 N C N 111 N C N 112 N O N 113 N N N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C N 130 N C N 131 N C N 132 N O N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 N C N 146 N C N 147 N O N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 S C N 156 N C N 157 N O N 158 N C Y 159 N C Y 160 N N Y 161 N C Y 162 N C Y 163 N N N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N O N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 S C N 183 N C N 184 N C N 185 N C N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C N 205 N C N 206 N C N 207 N C N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N N N 223 S C N 224 N C N 225 N O N 226 N C N 227 N C N 228 N C N 229 N C N 230 N N N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C N 252 N C N 253 N S N 254 N C N 255 N O N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C Y 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N O N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N S N 322 N O N 323 N O N 324 N O N 325 N O N 326 N N N 327 S C N 328 N C N 329 N O N 330 R C N 331 N O N 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N N N 344 S C N 345 N C N 346 N O N 347 N C Y 348 N C Y 349 N C Y 350 N C Y 351 N N Y 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C N 381 N O N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C N 399 N C N 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing Y 70 N doub Y 71 N sing Y 72 N sing N 73 N sing Y 74 N doub Y 75 N sing Y 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N doub N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing Y 157 N sing Y 158 N doub Y 159 N doub N 160 N sing Y 161 N sing N 162 N sing Y 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing Y 265 N doub Y 266 N sing Y 267 N sing N 268 N sing Y 269 N doub N 270 N sing Y 271 N doub N 272 N sing Y 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N sing N 337 N sing Y 338 N doub Y 339 N sing Y 340 N sing N 341 N sing Y 342 N doub Y 343 N sing Y 344 N sing N 345 N sing Y 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing Y 366 N doub Y 367 N sing Y 368 N sing N 369 N sing Y 370 N doub N 371 N sing Y 372 N doub N 373 N sing Y 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing DE Chemmedchem 1860-7179 6 258 261 10.1002/cmdc.201000483 21275048 Fragment-based design of ligands targeting a novel site on the integrase enzyme of human immunodeficiency virus 1 2011 10.2210/pdb3ao1/pdb pdb_00003ao1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 double crystal monochromator and K-B pair of biomorph mirrors IMAGE PLATE 2007-08-27 MAR scanner 300 mm plate double crystal monochromator SINGLE WAVELENGTH M x-ray 1 0.97937 1.0 23-ID-B APS 0.97937 SYNCHROTRON APS BEAMLINE 23-ID-B 17802.174 POL polyprotein Integrase CATALYTIC CORE DOMAIN, 765-927 C56S, W131D, F139D, F185H 2 man polymer 112.411 CADMIUM ION 4 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 138.121 1,3-benzodioxol-5-ol 3 syn non-polymer 18.015 water 72 nat water no no MHGQVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGGIGGYSAGERIVDIIATDIQ TKE MHGQVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGGIGGYSAGERIVDIIATDIQ TKE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n NL43 sample pol 11676 Human immunodeficiency virus 1 562 Escherichia coli BL21 (de3) Plasmid PeT23b+ 1 2.16 42.96 VAPOR DIFFUSION, HANGING DROP 5.6 1.6M AmSO4, 0.1M Na Citrate pH 5.6, 5mM CdCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2011-03-09 1 1 2011-07-13 1 2 2023-11-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id HIV-1 integrase core domain PDBJ Y PDBJ 2010-09-17 REL REL CD CADMIUM ION SO4 SULFATE ION BZX 1,3-benzodioxol-5-ol HOH water 3L3U PDB ENTRY 3L3U PDB experimental model CD 1003 2 CD CD 1003 A CD 1004 2 CD CD 1004 A SO4 1 3 SO4 SO4 1 A BZX 1 4 BZX BZX 213 A BZX 1 4 BZX BZX 214 A CD 1001 2 CD CD 1001 B CD 1002 2 CD CD 1002 B BZX 1 4 BZX BZX 1 B HOH 4 5 HOH HOH 4 A HOH 5 5 HOH HOH 5 A HOH 8 5 HOH HOH 8 A HOH 9 5 HOH HOH 9 A HOH 11 5 HOH HOH 11 A HOH 14 5 HOH HOH 14 A HOH 15 5 HOH HOH 15 A HOH 16 5 HOH HOH 16 A HOH 17 5 HOH HOH 17 A HOH 23 5 HOH HOH 23 A HOH 24 5 HOH HOH 24 A HOH 26 5 HOH HOH 26 A HOH 27 5 HOH HOH 27 A HOH 29 5 HOH HOH 29 A HOH 30 5 HOH HOH 30 A HOH 31 5 HOH HOH 31 A HOH 32 5 HOH HOH 32 A HOH 33 5 HOH HOH 33 A HOH 34 5 HOH HOH 34 A HOH 35 5 HOH HOH 35 A HOH 37 5 HOH HOH 37 A HOH 38 5 HOH HOH 38 A HOH 39 5 HOH HOH 39 A HOH 40 5 HOH HOH 40 A HOH 42 5 HOH HOH 42 A HOH 44 5 HOH HOH 44 A HOH 46 5 HOH HOH 46 A HOH 51 5 HOH HOH 215 A HOH 55 5 HOH HOH 216 A HOH 56 5 HOH HOH 217 A HOH 57 5 HOH HOH 218 A HOH 60 5 HOH HOH 219 A HOH 61 5 HOH HOH 220 A HOH 64 5 HOH HOH 221 A HOH 2 5 HOH HOH 2 B HOH 3 5 HOH HOH 3 B HOH 6 5 HOH HOH 6 B HOH 7 5 HOH HOH 7 B HOH 10 5 HOH HOH 10 B HOH 12 5 HOH HOH 12 B HOH 13 5 HOH HOH 13 B HOH 18 5 HOH HOH 18 B HOH 19 5 HOH HOH 19 B HOH 20 5 HOH HOH 20 B HOH 21 5 HOH HOH 21 B HOH 22 5 HOH HOH 22 B HOH 25 5 HOH HOH 25 B HOH 28 5 HOH HOH 28 B HOH 36 5 HOH HOH 36 B HOH 41 5 HOH HOH 41 B HOH 43 5 HOH HOH 43 B HOH 45 5 HOH HOH 45 B HOH 47 5 HOH HOH 47 B HOH 48 5 HOH HOH 48 B HOH 49 5 HOH HOH 49 B HOH 1 5 HOH HOH 213 B HOH 50 5 HOH HOH 214 B HOH 52 5 HOH HOH 215 B HOH 53 5 HOH HOH 216 B HOH 54 5 HOH HOH 217 B HOH 58 5 HOH HOH 218 B HOH 59 5 HOH HOH 219 B HOH 62 5 HOH HOH 220 B HOH 63 5 HOH HOH 221 B HOH 65 5 HOH HOH 222 B HOH 66 5 HOH HOH 223 B HOH 67 5 HOH HOH 224 B HOH 68 5 HOH HOH 225 B HOH 69 5 HOH HOH 226 B HOH 70 5 HOH HOH 227 B HOH 71 5 HOH HOH 228 B HOH 72 5 HOH HOH 229 B n 1 50 A n 2 51 A n 3 52 A n 4 53 A n 5 54 A n 6 55 A n 7 56 A SER 57 n 8 SER 57 A PRO 58 n 9 PRO 58 A GLY 59 n 10 GLY 59 A ILE 60 n 11 ILE 60 A TRP 61 n 12 TRP 61 A GLN 62 n 13 GLN 62 A LEU 63 n 14 LEU 63 A ASP 64 n 15 ASP 64 A CYS 65 n 16 CYS 65 A THR 66 n 17 THR 66 A HIS 67 n 18 HIS 67 A LEU 68 n 19 LEU 68 A GLU 69 n 20 GLU 69 A GLY 70 n 21 GLY 70 A LYS 71 n 22 LYS 71 A VAL 72 n 23 VAL 72 A ILE 73 n 24 ILE 73 A LEU 74 n 25 LEU 74 A VAL 75 n 26 VAL 75 A ALA 76 n 27 ALA 76 A VAL 77 n 28 VAL 77 A HIS 78 n 29 HIS 78 A VAL 79 n 30 VAL 79 A ALA 80 n 31 ALA 80 A SER 81 n 32 SER 81 A GLY 82 n 33 GLY 82 A TYR 83 n 34 TYR 83 A ILE 84 n 35 ILE 84 A GLU 85 n 36 GLU 85 A ALA 86 n 37 ALA 86 A GLU 87 n 38 GLU 87 A VAL 88 n 39 VAL 88 A ILE 89 n 40 ILE 89 A PRO 90 n 41 PRO 90 A ALA 91 n 42 ALA 91 A GLU 92 n 43 GLU 92 A THR 93 n 44 THR 93 A GLY 94 n 45 GLY 94 A GLN 95 n 46 GLN 95 A GLU 96 n 47 GLU 96 A THR 97 n 48 THR 97 A ALA 98 n 49 ALA 98 A TYR 99 n 50 TYR 99 A PHE 100 n 51 PHE 100 A LEU 101 n 52 LEU 101 A LEU 102 n 53 LEU 102 A LYS 103 n 54 LYS 103 A LEU 104 n 55 LEU 104 A ALA 105 n 56 ALA 105 A GLY 106 n 57 GLY 106 A ARG 107 n 58 ARG 107 A TRP 108 n 59 TRP 108 A PRO 109 n 60 PRO 109 A VAL 110 n 61 VAL 110 A LYS 111 n 62 LYS 111 A THR 112 n 63 THR 112 A VAL 113 n 64 VAL 113 A HIS 114 n 65 HIS 114 A THR 115 n 66 THR 115 A ASP 116 n 67 ASP 116 A ASN 117 n 68 ASN 117 A GLY 118 n 69 GLY 118 A SER 119 n 70 SER 119 A ASN 120 n 71 ASN 120 A PHE 121 n 72 PHE 121 A THR 122 n 73 THR 122 A SER 123 n 74 SER 123 A THR 124 n 75 THR 124 A THR 125 n 76 THR 125 A VAL 126 n 77 VAL 126 A LYS 127 n 78 LYS 127 A ALA 128 n 79 ALA 128 A ALA 129 n 80 ALA 129 A CYS 130 n 81 CYS 130 A ASP 131 n 82 ASP 131 A TRP 132 n 83 TRP 132 A ALA 133 n 84 ALA 133 A GLY 134 n 85 GLY 134 A ILE 135 n 86 ILE 135 A LYS 136 n 87 LYS 136 A GLN 137 n 88 GLN 137 A GLU 138 n 89 GLU 138 A ASP 139 n 90 ASP 139 A GLY 140 n 91 GLY 140 A ILE 141 n 92 ILE 141 A PRO 142 n 93 PRO 142 A n 94 143 A n 95 144 A n 96 145 A n 97 146 A n 98 147 A n 99 148 A n 100 149 A n 101 150 A n 102 151 A n 103 152 A SER 153 n 104 SER 153 A MET 154 n 105 MET 154 A ASN 155 n 106 ASN 155 A LYS 156 n 107 LYS 156 A GLU 157 n 108 GLU 157 A LEU 158 n 109 LEU 158 A LYS 159 n 110 LYS 159 A LYS 160 n 111 LYS 160 A ILE 161 n 112 ILE 161 A ILE 162 n 113 ILE 162 A GLY 163 n 114 GLY 163 A GLN 164 n 115 GLN 164 A VAL 165 n 116 VAL 165 A ARG 166 n 117 ARG 166 A ASP 167 n 118 ASP 167 A GLN 168 n 119 GLN 168 A ALA 169 n 120 ALA 169 A GLU 170 n 121 GLU 170 A HIS 171 n 122 HIS 171 A LEU 172 n 123 LEU 172 A LYS 173 n 124 LYS 173 A THR 174 n 125 THR 174 A ALA 175 n 126 ALA 175 A VAL 176 n 127 VAL 176 A GLN 177 n 128 GLN 177 A MET 178 n 129 MET 178 A ALA 179 n 130 ALA 179 A VAL 180 n 131 VAL 180 A PHE 181 n 132 PHE 181 A ILE 182 n 133 ILE 182 A HIS 183 n 134 HIS 183 A ASN 184 n 135 ASN 184 A HIS 185 n 136 HIS 185 A LYS 186 n 137 LYS 186 A ARG 187 n 138 ARG 187 A LYS 188 n 139 LYS 188 A GLY 189 n 140 GLY 189 A GLY 190 n 141 GLY 190 A ILE 191 n 142 ILE 191 A GLY 192 n 143 GLY 192 A GLY 193 n 144 GLY 193 A TYR 194 n 145 TYR 194 A SER 195 n 146 SER 195 A ALA 196 n 147 ALA 196 A GLY 197 n 148 GLY 197 A GLU 198 n 149 GLU 198 A ARG 199 n 150 ARG 199 A ILE 200 n 151 ILE 200 A VAL 201 n 152 VAL 201 A ASP 202 n 153 ASP 202 A ILE 203 n 154 ILE 203 A ILE 204 n 155 ILE 204 A ALA 205 n 156 ALA 205 A THR 206 n 157 THR 206 A ASP 207 n 158 ASP 207 A n 159 208 A n 160 209 A n 161 210 A n 162 211 A n 163 212 A n 1 50 B n 2 51 B n 3 52 B n 4 53 B n 5 54 B n 6 55 B n 7 56 B SER 57 n 8 SER 57 B PRO 58 n 9 PRO 58 B GLY 59 n 10 GLY 59 B ILE 60 n 11 ILE 60 B TRP 61 n 12 TRP 61 B GLN 62 n 13 GLN 62 B LEU 63 n 14 LEU 63 B ASP 64 n 15 ASP 64 B CYS 65 n 16 CYS 65 B THR 66 n 17 THR 66 B HIS 67 n 18 HIS 67 B LEU 68 n 19 LEU 68 B GLU 69 n 20 GLU 69 B GLY 70 n 21 GLY 70 B LYS 71 n 22 LYS 71 B VAL 72 n 23 VAL 72 B ILE 73 n 24 ILE 73 B LEU 74 n 25 LEU 74 B VAL 75 n 26 VAL 75 B ALA 76 n 27 ALA 76 B VAL 77 n 28 VAL 77 B HIS 78 n 29 HIS 78 B VAL 79 n 30 VAL 79 B ALA 80 n 31 ALA 80 B SER 81 n 32 SER 81 B GLY 82 n 33 GLY 82 B TYR 83 n 34 TYR 83 B ILE 84 n 35 ILE 84 B GLU 85 n 36 GLU 85 B ALA 86 n 37 ALA 86 B GLU 87 n 38 GLU 87 B VAL 88 n 39 VAL 88 B ILE 89 n 40 ILE 89 B PRO 90 n 41 PRO 90 B ALA 91 n 42 ALA 91 B GLU 92 n 43 GLU 92 B THR 93 n 44 THR 93 B GLY 94 n 45 GLY 94 B GLN 95 n 46 GLN 95 B GLU 96 n 47 GLU 96 B THR 97 n 48 THR 97 B ALA 98 n 49 ALA 98 B TYR 99 n 50 TYR 99 B PHE 100 n 51 PHE 100 B LEU 101 n 52 LEU 101 B LEU 102 n 53 LEU 102 B LYS 103 n 54 LYS 103 B LEU 104 n 55 LEU 104 B ALA 105 n 56 ALA 105 B GLY 106 n 57 GLY 106 B ARG 107 n 58 ARG 107 B TRP 108 n 59 TRP 108 B PRO 109 n 60 PRO 109 B VAL 110 n 61 VAL 110 B LYS 111 n 62 LYS 111 B THR 112 n 63 THR 112 B VAL 113 n 64 VAL 113 B HIS 114 n 65 HIS 114 B THR 115 n 66 THR 115 B ASP 116 n 67 ASP 116 B ASN 117 n 68 ASN 117 B GLY 118 n 69 GLY 118 B SER 119 n 70 SER 119 B ASN 120 n 71 ASN 120 B PHE 121 n 72 PHE 121 B THR 122 n 73 THR 122 B SER 123 n 74 SER 123 B THR 124 n 75 THR 124 B THR 125 n 76 THR 125 B VAL 126 n 77 VAL 126 B LYS 127 n 78 LYS 127 B ALA 128 n 79 ALA 128 B ALA 129 n 80 ALA 129 B CYS 130 n 81 CYS 130 B ASP 131 n 82 ASP 131 B TRP 132 n 83 TRP 132 B ALA 133 n 84 ALA 133 B GLY 134 n 85 GLY 134 B ILE 135 n 86 ILE 135 B LYS 136 n 87 LYS 136 B GLN 137 n 88 GLN 137 B GLU 138 n 89 GLU 138 B n 90 139 B n 91 140 B n 92 141 B n 93 142 B n 94 143 B n 95 144 B n 96 145 B n 97 146 B n 98 147 B n 99 148 B GLY 149 n 100 GLY 149 B VAL 150 n 101 VAL 150 B ILE 151 n 102 ILE 151 B GLU 152 n 103 GLU 152 B SER 153 n 104 SER 153 B MET 154 n 105 MET 154 B ASN 155 n 106 ASN 155 B LYS 156 n 107 LYS 156 B GLU 157 n 108 GLU 157 B LEU 158 n 109 LEU 158 B LYS 159 n 110 LYS 159 B LYS 160 n 111 LYS 160 B ILE 161 n 112 ILE 161 B ILE 162 n 113 ILE 162 B GLY 163 n 114 GLY 163 B GLN 164 n 115 GLN 164 B VAL 165 n 116 VAL 165 B ARG 166 n 117 ARG 166 B ASP 167 n 118 ASP 167 B GLN 168 n 119 GLN 168 B ALA 169 n 120 ALA 169 B GLU 170 n 121 GLU 170 B HIS 171 n 122 HIS 171 B LEU 172 n 123 LEU 172 B LYS 173 n 124 LYS 173 B THR 174 n 125 THR 174 B ALA 175 n 126 ALA 175 B VAL 176 n 127 VAL 176 B GLN 177 n 128 GLN 177 B MET 178 n 129 MET 178 B ALA 179 n 130 ALA 179 B VAL 180 n 131 VAL 180 B PHE 181 n 132 PHE 181 B ILE 182 n 133 ILE 182 B HIS 183 n 134 HIS 183 B ASN 184 n 135 ASN 184 B HIS 185 n 136 HIS 185 B LYS 186 n 137 LYS 186 B ARG 187 n 138 ARG 187 B LYS 188 n 139 LYS 188 B GLY 189 n 140 GLY 189 B GLY 190 n 141 GLY 190 B ILE 191 n 142 ILE 191 B GLY 192 n 143 GLY 192 B GLY 193 n 144 GLY 193 B TYR 194 n 145 TYR 194 B SER 195 n 146 SER 195 B ALA 196 n 147 ALA 196 B GLY 197 n 148 GLY 197 B GLU 198 n 149 GLU 198 B ARG 199 n 150 ARG 199 B ILE 200 n 151 ILE 200 B VAL 201 n 152 VAL 201 B ASP 202 n 153 ASP 202 B ILE 203 n 154 ILE 203 B ILE 204 n 155 ILE 204 B ALA 205 n 156 ALA 205 B THR 206 n 157 THR 206 B ASP 207 n 158 ASP 207 B ILE 208 n 159 ILE 208 B n 160 209 B n 161 210 B n 162 211 B n 163 212 B author_and_software_defined_assembly PISA 2 dimeric 2750 -14 12710 A HOH 30 K O HOH 1_555 A CD 1004 D CD CD 1_555 A CYS 65 A SG CYS 16 1_555 164.8 A HOH 30 K O HOH 1_555 A CD 1004 D CD CD 1_555 A GLU 92 A OE1 GLU 43 1_555 77.9 A CYS 65 A SG CYS 16 1_555 A CD 1004 D CD CD 1_555 A GLU 92 A OE1 GLU 43 1_555 90.4 A HOH 30 K O HOH 1_555 A CD 1004 D CD CD 1_555 A ASP 116 A OD2 ASP 67 1_555 87.2 A CYS 65 A SG CYS 16 1_555 A CD 1004 D CD CD 1_555 A ASP 116 A OD2 ASP 67 1_555 105.2 A GLU 92 A OE1 GLU 43 1_555 A CD 1004 D CD CD 1_555 A ASP 116 A OD2 ASP 67 1_555 163.9 A CYS 65 A SG CYS 16 1_555 A CD 1003 C CD CD 1_555 A HIS 67 A NE2 HIS 18 1_555 113.6 A CYS 65 A SG CYS 16 1_555 A CD 1003 C CD CD 1_555 A GLU 92 A OE2 GLU 43 1_555 115.1 A HIS 67 A NE2 HIS 18 1_555 A CD 1003 C CD CD 1_555 A GLU 92 A OE2 GLU 43 1_555 88.7 B HOH 3 L O HOH 1_555 B CD 1001 H CD CD 1_555 B CYS 65 B SG CYS 16 1_555 166.3 B HOH 3 L O HOH 1_555 B CD 1001 H CD CD 1_555 B GLU 92 B OE2 GLU 43 1_555 84.3 B CYS 65 B SG CYS 16 1_555 B CD 1001 H CD CD 1_555 B GLU 92 B OE2 GLU 43 1_555 91.6 B HOH 3 L O HOH 1_555 B CD 1001 H CD CD 1_555 B ASP 116 B OD2 ASP 67 1_555 82.0 B CYS 65 B SG CYS 16 1_555 B CD 1001 H CD CD 1_555 B ASP 116 B OD2 ASP 67 1_555 101.8 B GLU 92 B OE2 GLU 43 1_555 B CD 1001 H CD CD 1_555 B ASP 116 B OD2 ASP 67 1_555 166.3 B CYS 65 B SG CYS 16 1_555 B CD 1002 I CD CD 1_555 B HIS 67 B NE2 HIS 18 1_555 114.4 B CYS 65 B SG CYS 16 1_555 B CD 1002 I CD CD 1_555 B GLU 92 B OE1 GLU 43 1_555 99.5 B HIS 67 B NE2 HIS 18 1_555 B CD 1002 I CD CD 1_555 B GLU 92 B OE1 GLU 43 1_555 89.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 89 A O ILE 40 A N VAL 72 A N VAL 23 A O ILE 73 A O ILE 24 A N THR 66 A N THR 17 A N LEU 63 A N LEU 14 A O HIS 114 A O HIS 65 A N VAL 113 A N VAL 64 A O GLU 138 A O GLU 89 B O GLU 85 B O GLU 36 B N ALA 76 B N ALA 27 B O VAL 75 B O VAL 26 B N ASP 64 B N ASP 15 B N LEU 63 B N LEU 14 B O HIS 114 B O HIS 65 B N VAL 113 B N VAL 64 B O LYS 136 B O LYS 87 B N LYS 188 B N LYS 139 B O TYR 194 B O TYR 145 1 A CG GLN 95 A CG GLN 46 1 Y 1 A CD GLN 95 A CD GLN 46 1 Y 1 A OE1 GLN 95 A OE1 GLN 46 1 Y 1 A NE2 GLN 95 A NE2 GLN 46 1 Y 1 A MET 50 A MET 1 1 Y 1 A HIS 51 A HIS 2 1 Y 1 A GLY 52 A GLY 3 1 Y 1 A GLN 53 A GLN 4 1 Y 1 A VAL 54 A VAL 5 1 Y 1 A ASP 55 A ASP 6 1 Y 1 A SER 56 A SER 7 1 Y 1 A TYR 143 A TYR 94 1 Y 1 A ASN 144 A ASN 95 1 Y 1 A PRO 145 A PRO 96 1 Y 1 A GLN 146 A GLN 97 1 Y 1 A SER 147 A SER 98 1 Y 1 A GLN 148 A GLN 99 1 Y 1 A GLY 149 A GLY 100 1 Y 1 A VAL 150 A VAL 101 1 Y 1 A ILE 151 A ILE 102 1 Y 1 A GLU 152 A GLU 103 1 Y 1 A ILE 208 A ILE 159 1 Y 1 A GLN 209 A GLN 160 1 Y 1 A THR 210 A THR 161 1 Y 1 A LYS 211 A LYS 162 1 Y 1 A GLU 212 A GLU 163 1 Y 1 B MET 50 B MET 1 1 Y 1 B HIS 51 B HIS 2 1 Y 1 B GLY 52 B GLY 3 1 Y 1 B GLN 53 B GLN 4 1 Y 1 B VAL 54 B VAL 5 1 Y 1 B ASP 55 B ASP 6 1 Y 1 B SER 56 B SER 7 1 Y 1 B ASP 139 B ASP 90 1 Y 1 B GLY 140 B GLY 91 1 Y 1 B ILE 141 B ILE 92 1 Y 1 B PRO 142 B PRO 93 1 Y 1 B TYR 143 B TYR 94 1 Y 1 B ASN 144 B ASN 95 1 Y 1 B PRO 145 B PRO 96 1 Y 1 B GLN 146 B GLN 97 1 Y 1 B SER 147 B SER 98 1 Y 1 B GLN 148 B GLN 99 1 Y 1 B GLN 209 B GLN 160 1 Y 1 B THR 210 B THR 161 1 Y 1 B LYS 211 B LYS 162 1 Y 1 B GLU 212 B GLU 163 1 Y 1 A B CD O CD HOH 1003 223 1.95 1_555 4_455 38.818 -0.33 0.00 0.00 2.64 0.00 -2.31 0.951 0.924 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.26760 0.21635 0.21876 1.90 49.40 1234 24930 23602 5.0 99.67 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.165 0.161 0.80 0.80 1.40 PDB ENTRY 3L3U MAXIMUM LIKELIHOOD MASK 1.90 49.40 72 2270 39 0 2159 0.009 0.022 2235 1.374 1.952 3024 4.863 5.000 279 33.015 24.831 89 14.597 15.000 382 12.575 15.000 8 0.071 0.200 343 0.004 0.021 1637 0.001 0.020 421 0.204 0.200 462 0.186 0.200 1457 0.175 0.200 1071 0.083 0.200 1107 0.181 0.200 116 0.004 0.200 1 0.254 0.200 5 0.114 0.200 15 0.249 0.200 46 0.386 0.200 7 2.152 1.500 1390 0.184 1.500 585 3.119 2.000 2232 3.050 3.000 845 4.325 4.500 792 0.398 0.344 1.949 101 1706 20 99.83 1.9 62 3AO1 24972 24930 0.086 0.093 1 11 7 99.9 0.48 1.9 2.0 3.2 0.52 7 100 data collection Blu-Ice phasing AMoRE refinement REFMAC 5.2.0019 data reduction MOSFLM data scaling SCALA N Fragment-based approach to the design of ligands targeting a novel site in HIV-1 integrase 1 N N 1 N N 2 N N 2 N N 3 N N 4 N N 4 N N 2 N N 2 N N 4 N N 5 N N 5 N N A THR 93 A THR 44 HELX_P A TRP 108 A TRP 59 1 1 16 A GLY 118 A GLY 69 HELX_P A SER 123 A SER 74 1 2 6 A SER 123 A SER 74 HELX_P A GLY 134 A GLY 85 1 3 12 A SER 153 A SER 104 HELX_P A ARG 166 A ARG 117 1 4 14 A ASP 167 A ASP 118 HELX_P A ALA 169 A ALA 120 5 5 3 A HIS 171 A HIS 122 HELX_P A LYS 186 A LYS 137 1 6 16 A SER 195 A SER 146 HELX_P A ALA 205 A ALA 156 1 7 11 B THR 93 B THR 44 HELX_P B TRP 108 B TRP 59 1 8 16 B GLY 118 B GLY 69 HELX_P B THR 122 B THR 73 5 9 5 B SER 123 B SER 74 HELX_P B GLY 134 B GLY 85 1 10 12 B VAL 150 B VAL 101 HELX_P B ARG 166 B ARG 117 1 11 17 B ASP 167 B ASP 118 HELX_P B ALA 169 B ALA 120 5 12 3 B HIS 171 B HIS 122 HELX_P B LYS 186 B LYS 137 1 13 16 B ALA 196 B ALA 147 HELX_P B ILE 208 B ILE 159 1 14 13 metalc 2.464 A HOH 30 K O HOH 1_555 A CD 1004 D CD CD 1_555 metalc 2.563 A CYS 65 A SG CYS 16 1_555 A CD 1003 C CD CD 1_555 metalc 2.618 A CYS 65 A SG CYS 16 1_555 A CD 1004 D CD CD 1_555 metalc 2.407 A HIS 67 A NE2 HIS 18 1_555 A CD 1003 C CD CD 1_555 metalc 1.926 A GLU 92 A OE2 GLU 43 1_555 A CD 1003 C CD CD 1_555 metalc 2.383 A GLU 92 A OE1 GLU 43 1_555 A CD 1004 D CD CD 1_555 metalc 2.374 A ASP 116 A OD2 ASP 67 1_555 A CD 1004 D CD CD 1_555 metalc 2.650 B HOH 3 L O HOH 1_555 B CD 1001 H CD CD 1_555 metalc 2.685 B CYS 65 B SG CYS 16 1_555 B CD 1001 H CD CD 1_555 metalc 2.588 B CYS 65 B SG CYS 16 1_555 B CD 1002 I CD CD 1_555 metalc 2.220 B HIS 67 B NE2 HIS 18 1_555 B CD 1002 I CD CD 1_555 metalc 2.010 B GLU 92 B OE2 GLU 43 1_555 B CD 1001 H CD CD 1_555 metalc 2.277 B GLU 92 B OE1 GLU 43 1_555 B CD 1002 I CD CD 1_555 metalc 2.243 B ASP 116 B OD2 ASP 67 1_555 B CD 1001 H CD CD 1_555 VIRAL PROTEIN/TRANSFERASE INHIBITOR DNA INTEGRATION, AIDS, INTEGRASE, ENDONUCLEASE, POLYNUCLEOTIDYL TRANSFERASE, DNA BINDING, VIRAL PROTEIN, RNaseH, Fragment binding, VIRAL PROTEIN-TRANSFERASE INHIBITOR complex Q72498_9HIV1 UNP 1 765 Q72498 MHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQ TKE 765 927 3AO1 50 212 Q72498 A 1 1 163 765 927 3AO1 50 212 Q72498 B 1 1 163 1 CYS engineered mutation SER 56 3AO1 A Q72498 UNP 771 7 1 TRP engineered mutation ASP 131 3AO1 A Q72498 UNP 846 82 1 PHE engineered mutation ASP 139 3AO1 A Q72498 UNP 854 90 1 PHE engineered mutation HIS 185 3AO1 A Q72498 UNP 900 136 2 CYS engineered mutation SER 56 3AO1 B Q72498 UNP 771 7 2 TRP engineered mutation ASP 131 3AO1 B Q72498 UNP 846 82 2 PHE engineered mutation ASP 139 3AO1 B Q72498 UNP 854 90 2 PHE engineered mutation HIS 185 3AO1 B Q72498 UNP 900 136 5 5 2 anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel parallel parallel anti-parallel A ILE 84 A ILE 35 A ILE 89 A ILE 40 A LYS 71 A LYS 22 A HIS 78 A HIS 29 A ILE 60 A ILE 11 A LEU 68 A LEU 19 A THR 112 A THR 63 A THR 115 A THR 66 A LYS 136 A LYS 87 A ASP 139 A ASP 90 B ILE 84 B ILE 35 B ILE 89 B ILE 40 B LYS 71 B LYS 22 B HIS 78 B HIS 29 B ILE 60 B ILE 11 B LEU 68 B LEU 19 B THR 112 B THR 63 B HIS 114 B HIS 65 B LYS 136 B LYS 87 B GLU 138 B GLU 89 B ARG 187 B ARG 138 B LYS 188 B LYS 139 B TYR 194 B TYR 145 B SER 195 B SER 146 BINDING SITE FOR RESIDUE CD A 1003 A CD 1003 Software 6 BINDING SITE FOR RESIDUE CD A 1004 A CD 1004 Software 7 BINDING SITE FOR RESIDUE SO4 A 1 A SO4 1 Software 9 BINDING SITE FOR RESIDUE BZX A 213 A BZX 213 Software 9 BINDING SITE FOR RESIDUE BZX A 214 A BZX 214 Software 4 BINDING SITE FOR RESIDUE CD B 1001 B CD 1001 Software 6 BINDING SITE FOR RESIDUE CD B 1002 B CD 1002 Software 5 BINDING SITE FOR RESIDUE BZX B 1 B BZX 1 Software 12 A CYS 65 A CYS 16 6 1_555 A HIS 67 A HIS 18 6 1_555 A GLU 92 A GLU 43 6 1_555 A CD 1004 D CD 6 1_555 B ASP 131 B ASP 82 6 4_455 B HOH 223 L HOH 6 4_455 A HOH 4 K HOH 7 1_555 A HOH 30 K HOH 7 1_555 A CYS 65 A CYS 16 7 1_555 A GLU 92 A GLU 43 7 1_555 A ASP 116 A ASP 67 7 1_555 A CD 1003 C CD 7 1_555 B ASP 131 B ASP 82 7 4_455 A HOH 11 K HOH 9 1_555 A GLU 69 A GLU 20 9 1_555 A LYS 71 A LYS 22 9 1_555 A ARG 166 A ARG 117 9 1_555 A GLU 170 A GLU 121 9 1_555 A HIS 171 A HIS 122 9 1_555 A LEU 172 A LEU 123 9 1_555 A ARG 187 A ARG 138 9 4_455 A HOH 221 K HOH 9 1_555 A HOH 31 K HOH 9 1_555 A TYR 83 A TYR 34 9 1_555 A ASN 184 A ASN 135 9 1_555 A HIS 185 A HIS 136 9 1_555 A GLY 197 A GLY 148 9 1_555 A VAL 201 A VAL 152 9 1_555 B GLY 106 B GLY 57 9 1_555 B ARG 107 B ARG 58 9 1_555 B PRO 109 B PRO 60 9 1_555 A HOH 9 K HOH 4 1_555 A GLY 70 A GLY 21 4 4_555 A HIS 185 A HIS 136 4 1_555 B PRO 109 B PRO 60 4 1_555 B HOH 3 L HOH 6 1_555 B CYS 65 B CYS 16 6 1_555 B GLU 92 B GLU 43 6 1_555 B ASP 116 B ASP 67 6 1_555 B HOH 213 L HOH 6 1_555 B CD 1002 I CD 6 1_555 B CYS 65 B CYS 16 5 1_555 B HIS 67 B HIS 18 5 1_555 B GLU 92 B GLU 43 5 1_555 B HOH 224 L HOH 5 1_555 B CD 1001 H CD 5 1_555 A GLY 106 A GLY 57 12 1_555 A ARG 107 A ARG 58 12 1_555 A TRP 108 A TRP 59 12 1_555 A PRO 109 A PRO 60 12 1_555 B HOH 22 L HOH 12 1_555 B HOH 36 L HOH 12 1_555 B TYR 83 B TYR 34 12 1_555 B ASN 184 B ASN 135 12 1_555 B HIS 185 B HIS 136 12 1_555 B GLY 197 B GLY 148 12 1_555 B GLU 198 B GLU 149 12 1_555 B HOH 225 L HOH 12 1_555 19 P 21 21 21