0.009051 0.000000 0.000000 0.000000 0.009051 0.000000 0.000000 0.000000 0.004896 0.00000 0.00000 0.00000 Watanabe, N. James, M.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 110.486 110.486 204.242 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C14 H22 N3 O7 P 375.314 n (2S)-2-amino-6-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]hexanoic acid N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 411 649 660 10.1016/j.jmb.2011.06.023 21722650 The Structure of ll-Diaminopimelate Aminotransferase from Chlamydia trachomatis: Implications for Its Broad Substrate Specificity. 2011 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2010-09-16 MARMOSAIC 300 mm CCD ACCEL/BRUKER double crystal monochromator (DCM) SINGLE WAVELENGTH M x-ray 1 0.97949 1.0 08ID-1 CLSI 0.97949 SYNCHROTRON CLSI BEAMLINE 08ID-1 44940.762 LL-diaminopimelate aminotransferase 2.6.1.83 1 man polymer 18.015 water 39 nat water LL-DAP-aminotransferase no yes MKRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPAL RQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFS(LLP) PLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATG FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQSHH HHHH MKRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPAL RQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF AGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATGFEVF GGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQSHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 400 dapL, aspC, CT_390 813 Chlamydia trachomatis 562 Escherichia coli Biological sequence 1 3.49 64.71 VAPOR DIFFUSION, SITTING DROP 7.5 10% PEG6000, 2.0M NaCl, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K 298.0 atom_site entity entity_name_com entity_poly entity_poly_seq entity_src_gen pdbx_distant_solvent_atoms pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_poly_seq_scheme pdbx_struct_assembly_gen pdbx_struct_mod_residue pdbx_struct_special_symmetry pdbx_unobs_or_zero_occ_residues pdbx_validate_torsion struct_asym struct_conn struct_ref_seq_dif repository Initial release Advisory Atomic model Data collection Database references Derived calculations Polymer sequence Source and taxonomy Structure summary 1 0 2011-08-31 2 0 2020-04-15 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.group_PDB _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.type_symbol _entity_name_com.name _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly_seq.mon_id _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.pdbx_seq_type _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_special_symmetry.label_asym_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details PDBJ Y PDBJ 2010-12-10 REL REL 1 A O HOH 427 5.92 1 A O HOH 429 7.96 1 A O HOH 430 6.73 1 A O HOH 435 7.85 1 A O HOH 436 7.28 1 A O HOH 440 10.23 HOH water HOH 2 2 HOH HOH 402 A HOH 3 2 HOH HOH 403 A HOH 4 2 HOH HOH 404 A HOH 5 2 HOH HOH 405 A HOH 6 2 HOH HOH 406 A HOH 7 2 HOH HOH 407 A HOH 8 2 HOH HOH 408 A HOH 10 2 HOH HOH 409 A HOH 12 2 HOH HOH 410 A HOH 13 2 HOH HOH 411 A HOH 15 2 HOH HOH 412 A HOH 19 2 HOH HOH 413 A HOH 20 2 HOH HOH 414 A HOH 24 2 HOH HOH 415 A HOH 25 2 HOH HOH 416 A HOH 26 2 HOH HOH 417 A HOH 30 2 HOH HOH 418 A HOH 32 2 HOH HOH 419 A HOH 35 2 HOH HOH 420 A HOH 37 2 HOH HOH 421 A HOH 38 2 HOH HOH 422 A HOH 40 2 HOH HOH 423 A HOH 42 2 HOH HOH 424 A HOH 47 2 HOH HOH 425 A HOH 51 2 HOH HOH 426 A HOH 53 2 HOH HOH 427 A HOH 54 2 HOH HOH 428 A HOH 55 2 HOH HOH 429 A HOH 58 2 HOH HOH 430 A HOH 59 2 HOH HOH 431 A HOH 60 2 HOH HOH 432 A HOH 61 2 HOH HOH 433 A HOH 62 2 HOH HOH 434 A HOH 63 2 HOH HOH 435 A HOH 64 2 HOH HOH 436 A HOH 65 2 HOH HOH 437 A HOH 66 2 HOH HOH 438 A HOH 67 2 HOH HOH 439 A HOH 68 2 HOH HOH 440 A MET 1 n 1 MET 1 A LYS 2 n 2 LYS 2 A ARG 3 n 3 ARG 3 A ASN 4 n 4 ASN 4 A PRO 5 n 5 PRO 5 A HIS 6 n 6 HIS 6 A PHE 7 n 7 PHE 7 A VAL 8 n 8 VAL 8 A SER 9 n 9 SER 9 A LEU 10 n 10 LEU 10 A n 11 11 A n 12 12 A n 13 13 A n 14 14 A n 15 15 A PHE 16 n 16 PHE 16 A ALA 17 n 17 ALA 17 A ASP 18 n 18 ASP 18 A LEU 19 n 19 LEU 19 A GLN 20 n 20 GLN 20 A LYS 21 n 21 LYS 21 A ARG 22 n 22 ARG 22 A VAL 23 n 23 VAL 23 A ALA 24 n 24 ALA 24 A GLN 25 n 25 GLN 25 A PHE 26 n 26 PHE 26 A ARG 27 n 27 ARG 27 A LEU 28 n 28 LEU 28 A GLU 29 n 29 GLU 29 A ASN 30 n 30 ASN 30 A PRO 31 n 31 PRO 31 A ALA 32 n 32 GLN 32 A n 33 33 A n 34 34 A VAL 35 n 35 VAL 35 A ILE 36 n 36 ILE 36 A ASN 37 n 37 ASN 37 A LEU 38 n 38 LEU 38 A SER 39 n 39 SER 39 A ILE 40 n 40 ILE 40 A GLY 41 n 41 GLY 41 A n 42 42 A n 43 43 A n 44 44 A n 45 45 A PRO 46 n 46 PRO 46 A LEU 47 n 47 LEU 47 A ASN 48 n 48 ASN 48 A ALA 49 n 49 ALA 49 A SER 50 n 50 SER 50 A VAL 51 n 51 VAL 51 A ALA 52 n 52 ALA 52 A GLU 53 n 53 GLU 53 A ALA 54 n 54 ALA 54 A PHE 55 n 55 PHE 55 A ALA 56 n 56 ALA 56 A SER 57 n 57 SER 57 A SER 58 n 58 SER 58 A ILE 59 n 59 ILE 59 A ALA 60 n 60 ALA 60 A ARG 61 n 61 ARG 61 A LEU 62 n 62 LEU 62 A SER 63 n 63 SER 63 A SER 64 n 64 SER 64 A PRO 65 n 65 PRO 65 A THR 66 n 66 THR 66 A n 67 67 A n 68 68 A n 69 69 A n 70 70 A n 71 71 A n 72 72 A n 73 73 A ASP 74 n 74 ASP 74 A PHE 75 n 75 PHE 75 A GLY 76 n 76 GLY 76 A LEU 77 n 77 LEU 77 A PRO 78 n 78 PRO 78 A ALA 79 n 79 ALA 79 A LEU 80 n 80 LEU 80 A ARG 81 n 81 ARG 81 A GLN 82 n 82 GLN 82 A LYS 83 n 83 LYS 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A GLU 86 n 86 GLU 86 A ASP 87 n 87 ASP 87 A PHE 88 n 88 PHE 88 A TYR 89 n 89 TYR 89 A ARG 90 n 90 ARG 90 A GLY 91 n 91 GLY 91 A PHE 92 n 92 PHE 92 A VAL 93 n 93 VAL 93 A ASP 94 n 94 ASP 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A GLU 97 n 97 GLU 97 A ILE 98 n 98 ILE 98 A PHE 99 n 99 PHE 99 A ILE 100 n 100 ILE 100 A SER 101 n 101 SER 101 A ASP 102 n 102 ASP 102 A GLY 103 n 103 GLY 103 A ALA 104 n 104 ALA 104 A LYS 105 n 105 LYS 105 A VAL 106 n 106 VAL 106 A ASP 107 n 107 ASP 107 A LEU 108 n 108 LEU 108 A PHE 109 n 109 PHE 109 A ARG 110 n 110 ARG 110 A LEU 111 n 111 LEU 111 A LEU 112 n 112 LEU 112 A SER 113 n 113 SER 113 A PHE 114 n 114 PHE 114 A PHE 115 n 115 PHE 115 A GLY 116 n 116 GLY 116 A PRO 117 n 117 PRO 117 A ASN 118 n 118 ASN 118 A GLN 119 n 119 GLN 119 A THR 120 n 120 THR 120 A VAL 121 n 121 VAL 121 A ALA 122 n 122 ALA 122 A ILE 123 n 123 ILE 123 A GLN 124 n 124 GLN 124 A ASP 125 n 125 ASP 125 A PRO 126 n 126 PRO 126 A SER 127 n 127 SER 127 A TYR 128 n 128 TYR 128 A PRO 129 n 129 PRO 129 A ALA 130 n 130 ALA 130 A TYR 131 n 131 TYR 131 A LEU 132 n 132 LEU 132 A ASP 133 n 133 ASP 133 A ILE 134 n 134 ILE 134 A ALA 135 n 135 ALA 135 A ARG 136 n 136 ARG 136 A LEU 137 n 137 LEU 137 A THR 138 n 138 THR 138 A GLY 139 n 139 GLY 139 A ALA 140 n 140 ALA 140 A LYS 141 n 141 LYS 141 A GLU 142 n 142 GLU 142 A ILE 143 n 143 ILE 143 A ILE 144 n 144 ILE 144 A ALA 145 n 145 ALA 145 A LEU 146 n 146 LEU 146 A PRO 147 n 147 PRO 147 A CYS 148 n 148 CYS 148 A LEU 149 n 149 LEU 149 A GLN 150 n 150 GLN 150 A GLU 151 n 151 GLU 151 A ASN 152 n 152 ASN 152 A ALA 153 n 153 ALA 153 A PHE 154 n 154 PHE 154 A PHE 155 n 155 PHE 155 A PRO 156 n 156 PRO 156 A GLU 157 n 157 GLU 157 A PHE 158 n 158 PHE 158 A PRO 159 n 159 PRO 159 A GLU 160 n 160 GLU 160 A ASP 161 n 161 ASP 161 A THR 162 n 162 THR 162 A HIS 163 n 163 HIS 163 A ILE 164 n 164 ILE 164 A ASP 165 n 165 ASP 165 A ILE 166 n 166 ILE 166 A LEU 167 n 167 LEU 167 A CYS 168 n 168 CYS 168 A LEU 169 n 169 LEU 169 A CYS 170 n 170 CYS 170 A SER 171 n 171 SER 171 A PRO 172 n 172 PRO 172 A ASN 173 n 173 ASN 173 A ASN 174 n 174 ASN 174 A PRO 175 n 175 PRO 175 A THR 176 n 176 THR 176 A GLY 177 n 177 GLY 177 A THR 178 n 178 THR 178 A VAL 179 n 179 VAL 179 A LEU 180 n 180 LEU 180 A ASN 181 n 181 ASN 181 A LYS 182 n 182 LYS 182 A ASP 183 n 183 ASP 183 A GLN 184 n 184 GLN 184 A LEU 185 n 185 LEU 185 A ARG 186 n 186 ARG 186 A ALA 187 n 187 ALA 187 A ILE 188 n 188 ILE 188 A VAL 189 n 189 VAL 189 A HIS 190 n 190 HIS 190 A TYR 191 n 191 TYR 191 A ALA 192 n 192 ALA 192 A ILE 193 n 193 ILE 193 A GLU 194 n 194 GLU 194 A HIS 195 n 195 HIS 195 A GLU 196 n 196 GLU 196 A ILE 197 n 197 ILE 197 A LEU 198 n 198 LEU 198 A ILE 199 n 199 ILE 199 A LEU 200 n 200 LEU 200 A PHE 201 n 201 PHE 201 A ASP 202 n 202 ASP 202 A ALA 203 n 203 ALA 203 A ALA 204 n 204 ALA 204 A TYR 205 n 205 TYR 205 A SER 206 n 206 SER 206 A THR 207 n 207 THR 207 A PHE 208 n 208 PHE 208 A ILE 209 n 209 ILE 209 A SER 210 n 210 SER 210 A ASP 211 n 211 ASP 211 A PRO 212 n 212 PRO 212 A SER 213 n 213 SER 213 A LEU 214 n 214 LEU 214 A PRO 215 n 215 PRO 215 A LYS 216 n 216 LYS 216 A SER 217 n 217 SER 217 A ILE 218 n 218 ILE 218 A PHE 219 n 219 PHE 219 A GLU 220 n 220 GLU 220 A ILE 221 n 221 ILE 221 A PRO 222 n 222 PRO 222 A ASP 223 n 223 ASP 223 A ALA 224 n 224 ALA 224 A ARG 225 n 225 ARG 225 A PHE 226 n 226 PHE 226 A CYS 227 n 227 CYS 227 A ALA 228 n 228 ALA 228 A ILE 229 n 229 ILE 229 A GLU 230 n 230 GLU 230 A ILE 231 n 231 ILE 231 A ASN 232 n 232 ASN 232 A SER 233 n 233 SER 233 A PHE 234 n 234 PHE 234 A SER 235 n 235 SER 235 A LLP 400 n 236 LLP 236 A PRO 237 n 237 PRO 237 A LEU 238 n 238 LEU 238 A GLY 239 n 239 GLY 239 A PHE 240 n 240 PHE 240 A ALA 241 n 241 ALA 241 A GLY 242 n 242 GLY 242 A ILE 243 n 243 ILE 243 A ARG 244 n 244 ARG 244 A LEU 245 n 245 LEU 245 A GLY 246 n 246 GLY 246 A TRP 247 n 247 TRP 247 A THR 248 n 248 THR 248 A VAL 249 n 249 VAL 249 A ILE 250 n 250 ILE 250 A PRO 251 n 251 PRO 251 A GLN 252 n 252 GLN 252 A GLU 253 n 253 GLU 253 A LEU 254 n 254 LEU 254 A THR 255 n 255 THR 255 A TYR 256 n 256 TYR 256 A ALA 257 n 257 ALA 257 A ASP 258 n 258 ASP 258 A GLY 259 n 259 GLY 259 A HIS 260 n 260 HIS 260 A PHE 261 n 261 PHE 261 A VAL 262 n 262 VAL 262 A ILE 263 n 263 ILE 263 A GLN 264 n 264 GLN 264 A ASP 265 n 265 ASP 265 A TRP 266 n 266 TRP 266 A GLU 267 n 267 GLU 267 A ARG 268 n 268 ARG 268 A PHE 269 n 269 PHE 269 A LEU 270 n 270 LEU 270 A SER 271 n 271 SER 271 A THR 272 n 272 THR 272 A THR 273 n 273 THR 273 A PHE 274 n 274 PHE 274 A ASN 275 n 275 ASN 275 A GLY 276 n 276 GLY 276 A ALA 277 n 277 ALA 277 A SER 278 n 278 SER 278 A ILE 279 n 279 ILE 279 A PRO 280 n 280 PRO 280 A ALA 281 n 281 ALA 281 A GLN 282 n 282 GLN 282 A GLU 283 n 283 GLU 283 A ALA 284 n 284 ALA 284 A GLY 285 n 285 GLY 285 A VAL 286 n 286 VAL 286 A ALA 287 n 287 ALA 287 A GLY 288 n 288 GLY 288 A LEU 289 n 289 LEU 289 A SER 290 n 290 SER 290 A ILE 291 n 291 ILE 291 A LEU 292 n 292 LEU 292 A PRO 293 n 293 PRO 293 A GLN 294 n 294 GLN 294 A LEU 295 n 295 LEU 295 A GLU 296 n 296 GLU 296 A ALA 297 n 297 ALA 297 A ILE 298 n 298 ILE 298 A HIS 299 n 299 HIS 299 A TYR 300 n 300 TYR 300 A TYR 301 n 301 TYR 301 A ARG 302 n 302 ARG 302 A GLU 303 n 303 GLU 303 A ASN 304 n 304 ASN 304 A SER 305 n 305 SER 305 A ASP 306 n 306 ASP 306 A LEU 307 n 307 LEU 307 A LEU 308 n 308 LEU 308 A ARG 309 n 309 ARG 309 A LYS 310 n 310 LYS 310 A ALA 311 n 311 ALA 311 A LEU 312 n 312 LEU 312 A LEU 313 n 313 LEU 313 A ALA 314 n 314 ALA 314 A THR 315 n 315 THR 315 A GLY 316 n 316 GLY 316 A PHE 317 n 317 PHE 317 A GLU 318 n 318 GLU 318 A VAL 319 n 319 VAL 319 A PHE 320 n 320 PHE 320 A GLY 321 n 321 GLY 321 A GLY 322 n 322 GLY 322 A GLU 323 n 323 GLU 323 A HIS 324 n 324 HIS 324 A ALA 325 n 325 ALA 325 A PRO 326 n 326 PRO 326 A TYR 327 n 327 TYR 327 A LEU 328 n 328 LEU 328 A TRP 329 n 329 TRP 329 A VAL 330 n 330 VAL 330 A LYS 331 n 331 LYS 331 A PRO 332 n 332 PRO 332 A n 333 333 A n 334 334 A n 335 335 A n 336 336 A n 337 337 A n 338 338 A ASP 339 n 339 ASP 339 A ARG 340 n 340 ARG 340 A ASP 341 n 341 ASP 341 A LEU 342 n 342 LEU 342 A PHE 343 n 343 PHE 343 A ASP 344 n 344 ASP 344 A PHE 345 n 345 PHE 345 A PHE 346 n 346 PHE 346 A LEU 347 n 347 LEU 347 A ARG 348 n 348 ARG 348 A GLU 349 n 349 GLU 349 A TYR 350 n 350 TYR 350 A HIS 351 n 351 HIS 351 A ILE 352 n 352 ILE 352 A ALA 353 n 353 ALA 353 A ILE 354 n 354 ILE 354 A THR 355 n 355 THR 355 A PRO 356 n 356 PRO 356 A GLY 357 n 357 GLY 357 A ILE 358 n 358 ILE 358 A GLY 359 n 359 GLY 359 A PHE 360 n 360 PHE 360 A GLY 361 n 361 GLY 361 A ARG 362 n 362 ARG 362 A SER 363 n 363 SER 363 A GLY 364 n 364 GLY 364 A SER 365 n 365 SER 365 A GLY 366 n 366 GLY 366 A PHE 367 n 367 PHE 367 A VAL 368 n 368 VAL 368 A ARG 369 n 369 ARG 369 A PHE 370 n 370 PHE 370 A SER 371 n 371 SER 371 A SER 372 n 372 SER 372 A LEU 373 n 373 LEU 373 A GLY 374 n 374 GLY 374 A LYS 375 n 375 LYS 375 A ARG 376 n 376 ARG 376 A GLU 377 n 377 GLU 377 A ASP 378 n 378 ASP 378 A ILE 379 n 379 ILE 379 A LEU 380 n 380 LEU 380 A ALA 381 n 381 ALA 381 A ALA 382 n 382 ALA 382 A CYS 383 n 383 CYS 383 A GLU 384 n 384 GLU 384 A ARG 385 n 385 ARG 385 A LEU 386 n 386 LEU 386 A GLN 387 n 387 GLN 387 A MET 388 n 388 MET 388 A n 389 389 A n 390 390 A n 391 391 A n 392 392 A n 393 393 A n 394 394 A n 395 395 A n 396 396 A n 397 397 A n 398 398 A n 399 399 A n 400 400 A author_and_software_defined_assembly PISA 2 dimeric 4680 -29 29980 A LLP 236 modified residue A LLP 236 LYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_555 x,-y+1/2,-z+1/4 crystal symmetry operation 0.0000000000 55.2430000000 51.0605000000 A N ILE 36 A N ILE 36 A O ALA 353 A O ALA 353 A N PHE 99 A N PHE 99 A O THR 248 A O THR 248 A O VAL 249 A O VAL 249 A N GLU 230 A N GLU 230 A O ILE 229 A O ILE 229 A N ILE 199 A N ILE 199 A O LEU 200 A O LEU 200 A N LEU 167 A N LEU 167 A O CYS 168 A O CYS 168 A N ALA 122 A N ALA 122 A N ASP 125 A N ASP 125 A O LEU 146 A O LEU 146 A N PHE 320 A N PHE 320 A O TRP 329 A O TRP 329 A N VAL 330 A N VAL 330 A O VAL 368 A O VAL 368 A O ARG 369 A O ARG 369 A N THR 355 A N THR 355 1 A HOH 404 B HOH 1 A HOH 419 B HOH 1 A CG GLN 32 A CG GLN 32 1 Y 1 A CD GLN 32 A CD GLN 32 1 Y 1 A OE1 GLN 32 A OE1 GLN 32 1 Y 1 A NE2 GLN 32 A NE2 GLN 32 1 Y 1 A THR 11 A THR 11 1 Y 1 A LYS 12 A LYS 12 1 Y 1 A ASN 13 A ASN 13 1 Y 1 A TYR 14 A TYR 14 1 Y 1 A LEU 15 A LEU 15 1 Y 1 A HIS 33 A HIS 33 1 Y 1 A THR 34 A THR 34 1 Y 1 A ASP 42 A ASP 42 1 Y 1 A THR 43 A THR 43 1 Y 1 A THR 44 A THR 44 1 Y 1 A GLN 45 A GLN 45 1 Y 1 A THR 67 A THR 67 1 Y 1 A CYS 68 A CYS 68 1 Y 1 A ARG 69 A ARG 69 1 Y 1 A GLY 70 A GLY 70 1 Y 1 A TYR 71 A TYR 71 1 Y 1 A GLY 72 A GLY 72 1 Y 1 A PRO 73 A PRO 73 1 Y 1 A THR 333 A THR 333 1 Y 1 A GLN 334 A GLN 334 1 Y 1 A ALA 335 A ALA 335 1 Y 1 A ASN 336 A ASN 336 1 Y 1 A ILE 337 A ILE 337 1 Y 1 A SER 338 A SER 338 1 Y 1 A ALA 389 A ALA 389 1 Y 1 A PRO 390 A PRO 390 1 Y 1 A ALA 391 A ALA 391 1 Y 1 A LEU 392 A LEU 392 1 Y 1 A GLN 393 A GLN 393 1 Y 1 A SER 394 A SER 394 1 Y 1 A HIS 395 A HIS 395 1 Y 1 A HIS 396 A HIS 396 1 Y 1 A HIS 397 A HIS 397 1 Y 1 A HIS 398 A HIS 398 1 Y 1 A HIS 399 A HIS 399 1 Y 1 A HIS 400 A HIS 400 1 Y 1 A HIS 6 -54.21 -7.15 1 A VAL 8 -85.39 38.86 1 A SER 9 -144.39 32.68 1 A ASP 18 85.11 -55.85 1 A ARG 22 -69.91 1.41 1 A LEU 28 -67.45 3.31 1 A PRO 31 -52.36 -8.15 1 A ILE 40 -174.43 -176.07 1 A SER 63 -79.68 26.81 1 A PHE 114 -29.69 -44.75 1 A ASP 223 88.09 -5.78 1 A CYS 227 -148.22 23.62 1 A PHE 234 -78.51 -82.04 1 A SER 235 26.88 -66.01 1 A LLP 236 -104.47 53.88 1 A LEU 238 -99.18 -149.51 1 A GLN 294 -156.72 -83.69 1 A LEU 295 9.19 93.91 1 A ALA 297 -51.55 0.88 1 A PRO 326 -88.65 35.97 1 A ARG 340 -56.99 -1.70 1 A ILE 358 -49.58 -10.22 1 A SER 365 -38.23 123.58 1 A ARG 385 -55.74 37.24 1 A LEU 386 -147.13 39.02 1 A GLN 387 -120.37 -97.94 79.910 -1.00 0.00 0.00 -1.00 0.00 2.00 0.941 0.914 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.28699 0.22223 0.22521 2.70 40.00 900 16706 5.1 99.08 11.614 0.238 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.331 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 2.70 40.00 39 2926 24 0 2863 0.020 0.022 2960 2.087 1.969 4014 8.161 5.000 358 36.706 23.381 139 22.438 15.000 462 18.632 15.000 20 0.137 0.200 440 0.011 0.021 2278 1.013 1.500 1814 1.934 2.000 2915 2.656 3.000 1146 4.437 4.500 1099 0.455 0.313 2.770 71 1198 20 99.84 2.70 40.0 3ASB 17651 0.053 1 35.8 8.1 2.70 2.80 3.3 1733 0.675 1 8.2 data collection MXDS phasing PHASER refinement REFMAC 5.5.0055 data reduction HKL-2000 data scaling HKL-2000 LL-diaminopimelate aminotransferase (E.C.2.6.1.83) Crystal structure of PLP-bound LL-diaminopimelate aminotransferase from Chlamydia trachomatis 1 N N 2 N N A ASN 4 A ASN 4 HELX_P A VAL 8 A VAL 8 5 1 5 A GLN 20 A GLN 20 HELX_P A LEU 28 A LEU 28 1 2 9 A ASN 48 A ASN 48 HELX_P A SER 63 A SER 63 1 3 16 A LEU 77 A LEU 77 HELX_P A PHE 88 A PHE 88 1 4 12 A ASP 94 A ASP 94 HELX_P A LYS 96 A LYS 96 5 5 3 A GLY 103 A GLY 103 HELX_P A PHE 115 A PHE 115 1 6 13 A TYR 128 A TYR 128 HELX_P A GLY 139 A GLY 139 1 7 12 A LEU 149 A LEU 149 HELX_P A ALA 153 A ALA 153 5 8 5 A ASN 181 A ASN 181 HELX_P A HIS 195 A HIS 195 1 9 15 A TYR 205 A TYR 205 HELX_P A ILE 209 A ILE 209 5 10 5 A SER 217 A SER 217 HELX_P A ILE 221 A ILE 221 5 11 5 A ASP 223 A ASP 223 HELX_P A PHE 226 A PHE 226 5 12 4 A PHE 261 A PHE 261 HELX_P A PHE 274 A PHE 274 1 13 14 A SER 278 A SER 278 HELX_P A LEU 292 A LEU 292 1 14 15 A LEU 295 A LEU 295 HELX_P A THR 315 A THR 315 1 15 21 A ARG 340 A ARG 340 HELX_P A HIS 351 A HIS 351 1 16 12 A ILE 358 A ILE 358 HELX_P A PHE 360 A PHE 360 5 17 3 A GLY 361 A GLY 361 HELX_P A SER 365 A SER 365 5 18 5 A LYS 375 A LYS 375 HELX_P A ARG 385 A ARG 385 1 19 11 covale 1.340 both A SER 235 A C SER 235 1_555 A LLP 236 A N LLP 236 1_555 covale 1.359 both A PRO 237 A N PRO 237 1_555 A LLP 236 A C LLP 236 1_555 TRANSFERASE PLP dependent aminotransferase, TRANSFERASE A PHE 16 A PHE 16 1 A ALA 17 A ALA 17 -0.24 A ALA 17 A ALA 17 1 A ASP 18 A ASP 18 10.03 A ASP 125 A ASP 125 1 A PRO 126 A PRO 126 4.76 A GLU 160 A GLU 160 1 A ASP 161 A ASP 161 -16.33 A SER 171 A SER 171 1 A PRO 172 A PRO 172 -5.75 A ASN 174 A ASN 174 1 A PRO 175 A PRO 175 25.31 A PRO 237 A PRO 237 1 A LEU 238 A LEU 238 -12.65 DAPAT_CHLTR UNP 1 1 O84395 MKRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPAL RQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF AGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATGFEVF GGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQS 1 394 3ASB 1 394 O84395 A 1 1 394 1 expression tag HIS 395 3ASB A O84395 UNP 395 1 expression tag HIS 396 3ASB A O84395 UNP 396 1 expression tag HIS 397 3ASB A O84395 UNP 397 1 expression tag HIS 398 3ASB A O84395 UNP 398 1 expression tag HIS 399 3ASB A O84395 UNP 399 1 expression tag HIS 400 3ASB A O84395 UNP 400 2 7 4 parallel anti-parallel anti-parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel A ILE 36 A ILE 36 A ASN 37 A ASN 37 A ILE 352 A ILE 352 A ALA 353 A ALA 353 A ILE 98 A ILE 98 A SER 101 A SER 101 A GLY 246 A GLY 246 A VAL 249 A VAL 249 A ALA 228 A ALA 228 A SER 233 A SER 233 A LEU 198 A LEU 198 A ASP 202 A ASP 202 A ILE 166 A ILE 166 A CYS 170 A CYS 170 A THR 120 A THR 120 A ASP 125 A ASP 125 A GLU 142 A GLU 142 A PRO 147 A PRO 147 A GLU 318 A GLU 318 A GLY 321 A GLY 321 A TYR 327 A TYR 327 A LYS 331 A LYS 331 A VAL 368 A VAL 368 A SER 371 A SER 371 A THR 355 A THR 355 A PRO 356 A PRO 356 BINDING SITE FOR RESIDUE LLP A 401 Software 15 A GLY 103 A GLY 103 15 1_555 A ALA 104 A ALA 104 15 1_555 A LYS 105 A LYS 105 15 1_555 A TYR 128 A TYR 128 15 1_555 A CYS 170 A CYS 170 15 1_555 A ASN 174 A ASN 174 15 1_555 A ASP 202 A ASP 202 15 1_555 A TYR 205 A TYR 205 15 1_555 A PHE 208 A PHE 208 15 1_555 A SER 233 A SER 233 15 1_555 A PHE 234 A PHE 234 15 1_555 A SER 235 A SER 235 15 1_555 A PRO 237 A PRO 237 15 1_555 A LEU 238 A LEU 238 15 1_555 A ASN 275 A ASN 275 15 6_555 98 I 41 2 2