0.014879
0.000000
0.005620
0.000000
0.027672
0.000000
0.000000
0.000000
0.031279
0.00000
0.00000
0.00000
Arita, K.
Sugita, K.
Unoki, M.
Hamamoto, R.
Sekiyama, N.
Tochio, H.
Ariyoshi, M.
Shirakawa, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
110.69
90.00
67.210
36.137
34.175
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
N
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
sing
Y
335
N
doub
N
336
N
sing
Y
337
N
doub
N
338
N
sing
Y
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
109
12950
12955
10.1073/pnas.1203701109
22837395
Recognition of modification status on a histone H3 tail by linked histone reader modules of the epigenetic regulator UHRF1
2012
10.2210/pdb3asl/pdb
pdb_00003asl
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
1
CCD
2008-11-12
ADSC QUANTUM 210
CCD
2009-01-22
ADSC QUANTUM 270
SAD
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
1
1.28221
1.0
1
1.0
AR-NW12A
Photon Factory
1.28221
SYNCHROTRON
PHOTON FACTORY BEAMLINE AR-NW12A
BL-17A
Photon Factory
1
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-17A
7920.976
E3 ubiquitin-protein ligase UHRF1
6.3.2.-
PHD finger domain
1
man
polymer
1251.436
Histone H3.3
residues in UNP 2-12
1
syn
polymer
65.409
ZINC ION
4
syn
non-polymer
62.068
1,2-ETHANEDIOL
4
syn
non-polymer
18.015
water
72
nat
water
no
no
SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA
SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA
A
polypeptide(L)
no
no
ARTKQTARKST
ARTKQTARKST
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
UHRF1
9606
Homo sapiens
562
Escherichia coli
2
2.12
41.88
VAPOR DIFFUSION, HANGING DROP
10mM sodium citrate, 42% PEGMME2000, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
1
0
2012-01-25
1
1
2012-08-15
1
2
2013-06-05
1
3
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2010-12-16
REL
REL
ZN
ZINC ION
EDO
1,2-ETHANEDIOL
HOH
water
9606
human
Homo sapiens
sample
ZN
1
3
ZN
ZN
1
A
ZN
2
3
ZN
ZN
2
A
ZN
3
3
ZN
ZN
3
A
ZN
4
3
ZN
ZN
4
A
EDO
2
4
EDO
EDO
368
A
EDO
3
4
EDO
EDO
369
A
EDO
4
4
EDO
EDO
370
A
EDO
1
4
EDO
EDO
12
B
HOH
6
5
HOH
HOH
6
A
HOH
8
5
HOH
HOH
8
A
HOH
9
5
HOH
HOH
9
A
HOH
10
5
HOH
HOH
10
A
HOH
12
5
HOH
HOH
12
A
HOH
13
5
HOH
HOH
13
A
HOH
14
5
HOH
HOH
14
A
HOH
15
5
HOH
HOH
15
A
HOH
17
5
HOH
HOH
17
A
HOH
18
5
HOH
HOH
18
A
HOH
19
5
HOH
HOH
19
A
HOH
20
5
HOH
HOH
20
A
HOH
21
5
HOH
HOH
21
A
HOH
22
5
HOH
HOH
22
A
HOH
24
5
HOH
HOH
24
A
HOH
25
5
HOH
HOH
25
A
HOH
26
5
HOH
HOH
26
A
HOH
27
5
HOH
HOH
27
A
HOH
28
5
HOH
HOH
28
A
HOH
29
5
HOH
HOH
29
A
HOH
30
5
HOH
HOH
30
A
HOH
31
5
HOH
HOH
31
A
HOH
32
5
HOH
HOH
32
A
HOH
33
5
HOH
HOH
33
A
HOH
34
5
HOH
HOH
34
A
HOH
35
5
HOH
HOH
35
A
HOH
36
5
HOH
HOH
36
A
HOH
37
5
HOH
HOH
37
A
HOH
38
5
HOH
HOH
38
A
HOH
39
5
HOH
HOH
39
A
HOH
40
5
HOH
HOH
40
A
HOH
42
5
HOH
HOH
42
A
HOH
44
5
HOH
HOH
44
A
HOH
45
5
HOH
HOH
45
A
HOH
46
5
HOH
HOH
46
A
HOH
47
5
HOH
HOH
47
A
HOH
48
5
HOH
HOH
48
A
HOH
49
5
HOH
HOH
49
A
HOH
50
5
HOH
HOH
50
A
HOH
51
5
HOH
HOH
51
A
HOH
53
5
HOH
HOH
53
A
HOH
54
5
HOH
HOH
54
A
HOH
55
5
HOH
HOH
55
A
HOH
57
5
HOH
HOH
57
A
HOH
58
5
HOH
HOH
58
A
HOH
59
5
HOH
HOH
59
A
HOH
60
5
HOH
HOH
60
A
HOH
61
5
HOH
HOH
61
A
HOH
62
5
HOH
HOH
62
A
HOH
63
5
HOH
HOH
63
A
HOH
65
5
HOH
HOH
65
A
HOH
66
5
HOH
HOH
66
A
HOH
67
5
HOH
HOH
67
A
HOH
68
5
HOH
HOH
68
A
HOH
69
5
HOH
HOH
69
A
HOH
70
5
HOH
HOH
70
A
HOH
71
5
HOH
HOH
71
A
HOH
72
5
HOH
HOH
72
A
HOH
1
5
HOH
HOH
371
A
HOH
2
5
HOH
HOH
372
A
HOH
3
5
HOH
HOH
373
A
HOH
4
5
HOH
HOH
374
A
HOH
5
5
HOH
HOH
13
B
HOH
7
5
HOH
HOH
14
B
HOH
11
5
HOH
HOH
15
B
HOH
16
5
HOH
HOH
16
B
HOH
23
5
HOH
HOH
23
B
HOH
41
5
HOH
HOH
41
B
HOH
43
5
HOH
HOH
43
B
HOH
52
5
HOH
HOH
52
B
HOH
56
5
HOH
HOH
56
B
HOH
64
5
HOH
HOH
64
B
n
1
298
A
GLY
299
n
2
GLY
299
A
PRO
300
n
3
PRO
300
A
SER
301
n
4
SER
301
A
CYS
302
n
5
CYS
302
A
LYS
303
n
6
LYS
303
A
HIS
304
n
7
HIS
304
A
CYS
305
n
8
CYS
305
A
LYS
306
n
9
LYS
306
A
ASP
307
n
10
ASP
307
A
ASP
308
n
11
ASP
308
A
VAL
309
n
12
VAL
309
A
ASN
310
n
13
ASN
310
A
ARG
311
n
14
ARG
311
A
LEU
312
n
15
LEU
312
A
CYS
313
n
16
CYS
313
A
ARG
314
n
17
ARG
314
A
VAL
315
n
18
VAL
315
A
CYS
316
n
19
CYS
316
A
ALA
317
n
20
ALA
317
A
CYS
318
n
21
CYS
318
A
HIS
319
n
22
HIS
319
A
LEU
320
n
23
LEU
320
A
CYS
321
n
24
CYS
321
A
GLY
322
n
25
GLY
322
A
GLY
323
n
26
GLY
323
A
ARG
324
n
27
ARG
324
A
GLN
325
n
28
GLN
325
A
ASP
326
n
29
ASP
326
A
PRO
327
n
30
PRO
327
A
ASP
328
n
31
ASP
328
A
LYS
329
n
32
LYS
329
A
GLN
330
n
33
GLN
330
A
LEU
331
n
34
LEU
331
A
MET
332
n
35
MET
332
A
CYS
333
n
36
CYS
333
A
ASP
334
n
37
ASP
334
A
GLU
335
n
38
GLU
335
A
CYS
336
n
39
CYS
336
A
ASP
337
n
40
ASP
337
A
MET
338
n
41
MET
338
A
ALA
339
n
42
ALA
339
A
PHE
340
n
43
PHE
340
A
HIS
341
n
44
HIS
341
A
ILE
342
n
45
ILE
342
A
TYR
343
n
46
TYR
343
A
CYS
344
n
47
CYS
344
A
LEU
345
n
48
LEU
345
A
ASP
346
n
49
ASP
346
A
PRO
347
n
50
PRO
347
A
PRO
348
n
51
PRO
348
A
LEU
349
n
52
LEU
349
A
SER
350
n
53
SER
350
A
SER
351
n
54
SER
351
A
VAL
352
n
55
VAL
352
A
PRO
353
n
56
PRO
353
A
SER
354
n
57
SER
354
A
GLU
355
n
58
GLU
355
A
ASP
356
n
59
ASP
356
A
GLU
357
n
60
GLU
357
A
TRP
358
n
61
TRP
358
A
TYR
359
n
62
TYR
359
A
CYS
360
n
63
CYS
360
A
PRO
361
n
64
PRO
361
A
GLU
362
n
65
GLU
362
A
CYS
363
n
66
CYS
363
A
ARG
364
n
67
ARG
364
A
ASN
365
n
68
ASN
365
A
ASP
366
n
69
ASP
366
A
n
70
367
A
ALA
1
n
1
ALA
1
B
ARG
2
n
2
ARG
2
B
THR
3
n
3
THR
3
B
LYS
4
n
4
LYS
4
B
GLN
5
n
5
GLN
5
B
THR
6
n
6
THR
6
B
ALA
7
n
7
ALA
7
B
ARG
8
n
8
ARG
8
B
LYS
9
n
9
LYS
9
B
n
10
10
B
n
11
11
B
10.2775
-6.5767
-0.2578
8.0260
1.1835
13.1448
0.1879
-0.3118
-0.7173
0.2959
0.0181
0.4645
1.0213
-0.3201
-0.2060
0.1630
-0.0591
-0.0034
0.0884
0.0354
0.0861
refined
-2.6161
5.0809
-4.4428
X-RAY DIFFRACTION
1.3544
3.1211
-2.3173
8.9009
-1.6552
11.9230
-0.1449
0.0883
0.0051
-0.1410
0.1541
0.0217
0.5669
-0.1997
-0.0092
0.0892
-0.0285
0.0129
0.1031
0.0028
0.0669
refined
-1.1521
6.9578
-12.7044
X-RAY DIFFRACTION
3.9102
1.5266
2.6204
2.1558
0.9786
13.4497
-0.0231
-0.0387
0.2396
0.0111
-0.1066
0.2242
-0.1688
-0.6332
0.1297
0.0341
0.0120
0.0082
0.1041
0.0162
0.0813
refined
-0.7552
14.9403
-9.6025
X-RAY DIFFRACTION
2.2106
2.1429
-2.3005
3.8339
0.7755
7.6273
0.1161
-0.0315
0.1165
-0.0694
0.0416
0.0719
-0.3139
0.0262
-0.1577
0.0623
-0.0226
0.0359
0.1054
0.0117
0.0785
refined
3.7877
18.5812
-6.4981
X-RAY DIFFRACTION
3.2012
0.3528
0.3375
0.5962
1.2875
3.4918
0.1076
0.1854
0.0264
0.0497
0.0462
-0.0401
0.1143
0.0167
-0.1538
0.0455
-0.0041
0.0129
0.0873
0.0029
0.0683
refined
8.5106
13.8244
-11.8972
X-RAY DIFFRACTION
3.4295
-1.9074
-0.5793
3.0691
2.7132
8.2159
0.0987
0.0569
0.0922
0.0478
0.0012
-0.1561
0.1557
0.1247
-0.1000
0.0734
-0.0024
0.0094
0.0939
-0.0252
0.0868
refined
13.8151
16.3400
-5.3290
X-RAY DIFFRACTION
11.3672
0.6878
4.8806
5.4146
2.9274
9.8475
-0.0060
-0.3316
-0.2808
0.3923
0.0734
0.1887
0.3404
-0.4853
-0.0674
0.2368
-0.1032
0.0075
0.1300
0.0039
0.1124
refined
7.4579
17.6068
4.9347
X-RAY DIFFRACTION
2.1873
2.4684
0.7608
2.8674
1.3176
3.0495
-0.0515
0.0269
0.2148
-0.1329
0.0323
0.2108
-0.3716
-0.0328
0.0192
0.0811
-0.0171
0.0354
0.0760
-0.0204
0.1122
refined
10.8460
22.0256
-7.2026
X-RAY DIFFRACTION
9.0145
-9.9325
0.2081
13.3287
-1.9039
6.0176
-0.0426
0.0125
0.3717
-0.0364
-0.0079
-0.2922
-0.5667
0.2311
0.0505
0.1205
-0.0564
0.0018
0.0890
-0.0132
0.1373
refined
15.8647
27.6825
-6.4922
X-RAY DIFFRACTION
6.9250
-0.9552
-3.3947
8.0103
3.1016
14.6387
-0.2401
-0.1708
-0.1154
0.5175
0.0394
-0.0725
-0.0318
0.1556
0.2008
0.0656
-0.0063
-0.0179
0.0922
-0.0264
0.1289
refined
19.9954
20.3399
3.5807
X-RAY DIFFRACTION
9.4354
1.2365
1.0641
8.1776
2.8358
4.8147
0.0695
0.0152
0.3887
0.4705
-0.1271
-0.0267
-0.0826
-0.2942
0.0576
0.1231
-0.0259
0.0054
0.1116
-0.0257
0.1152
refined
9.0767
26.2117
4.7952
X-RAY DIFFRACTION
1.6995
-1.3128
1.4491
5.0857
1.4951
4.6894
0.1637
0.0287
0.0368
-0.2606
-0.0815
-0.0132
0.0781
0.2596
-0.0822
0.0271
0.0101
0.0026
0.0488
-0.0084
0.0283
refined
18.1145
10.3716
-5.1104
X-RAY DIFFRACTION
A
299
A
304
X-RAY DIFFRACTION
1
A
305
A
310
X-RAY DIFFRACTION
2
A
311
A
315
X-RAY DIFFRACTION
3
A
316
A
321
X-RAY DIFFRACTION
4
A
322
A
327
X-RAY DIFFRACTION
5
A
328
A
332
X-RAY DIFFRACTION
6
A
333
A
338
X-RAY DIFFRACTION
7
A
339
A
345
X-RAY DIFFRACTION
8
A
346
A
351
X-RAY DIFFRACTION
9
A
352
A
357
X-RAY DIFFRACTION
10
A
358
A
366
X-RAY DIFFRACTION
11
B
1
B
9
X-RAY DIFFRACTION
12
author_and_software_defined_assembly
PISA
2
dimeric
940
-2
5480
A
CYS
302
A
SG
CYS
5
1_555
A
ZN
1
C
ZN
ZN
1_555
A
CYS
305
A
SG
CYS
8
1_555
107.1
A
CYS
302
A
SG
CYS
5
1_555
A
ZN
1
C
ZN
ZN
1_555
A
CYS
313
A
SG
CYS
16
1_555
114.6
A
CYS
305
A
SG
CYS
8
1_555
A
ZN
1
C
ZN
ZN
1_555
A
CYS
313
A
SG
CYS
16
1_555
112.9
A
CYS
302
A
SG
CYS
5
1_555
A
ZN
1
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
19
1_555
111.5
A
CYS
305
A
SG
CYS
8
1_555
A
ZN
1
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
19
1_555
100.8
A
CYS
313
A
SG
CYS
16
1_555
A
ZN
1
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
19
1_555
109.2
A
CYS
318
A
SG
CYS
21
1_555
A
ZN
2
D
ZN
ZN
1_555
A
CYS
321
A
SG
CYS
24
1_555
109.0
A
CYS
318
A
SG
CYS
21
1_555
A
ZN
2
D
ZN
ZN
1_555
A
HIS
341
A
ND1
HIS
44
1_555
99.7
A
CYS
321
A
SG
CYS
24
1_555
A
ZN
2
D
ZN
ZN
1_555
A
HIS
341
A
ND1
HIS
44
1_555
99.4
A
CYS
318
A
SG
CYS
21
1_555
A
ZN
2
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
47
1_555
122.5
A
CYS
321
A
SG
CYS
24
1_555
A
ZN
2
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
47
1_555
112.7
A
HIS
341
A
ND1
HIS
44
1_555
A
ZN
2
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
47
1_555
110.4
A
CYS
333
A
SG
CYS
36
1_555
A
ZN
3
E
ZN
ZN
1_555
A
CYS
336
A
SG
CYS
39
1_555
105.6
A
CYS
333
A
SG
CYS
36
1_555
A
ZN
3
E
ZN
ZN
1_555
A
CYS
360
A
SG
CYS
63
1_555
109.4
A
CYS
336
A
SG
CYS
39
1_555
A
ZN
3
E
ZN
ZN
1_555
A
CYS
360
A
SG
CYS
63
1_555
114.5
A
CYS
333
A
SG
CYS
36
1_555
A
ZN
3
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
66
1_555
109.1
A
CYS
336
A
SG
CYS
39
1_555
A
ZN
3
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
66
1_555
110.8
A
CYS
360
A
SG
CYS
63
1_555
A
ZN
3
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
66
1_555
107.4
A
HIS
319
A
NE2
HIS
22
1_555
A
ZN
4
F
ZN
ZN
1_555
A
GLU
362
A
OE1
GLU
65
1_555
102.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
331
A
N
LEU
34
A
O
PHE
340
A
O
PHE
43
1
A
SER
298
A
SER
1
1
Y
1
A
ALA
367
A
ALA
70
1
Y
1
B
SER
10
B
SER
10
1
Y
1
B
THR
11
B
THR
11
1
Y
1
A
ALA
317
-119.72
-155.54
1
A
GLU
335
-102.47
-64.16
12.965
0.58
0.00
0.46
-0.25
0.00
-0.01
0.964
0.947
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.19621
0.15880
0.16052
0.16052
1.41
31.97
702
14019
13317
5.0
93.05
1.917
0.036
RANDOM
1,2
THROUGHOUT
SAD
0.066
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.41
31.97
72
696
20
0
604
0.014
0.021
628
0.002
0.020
461
1.512
1.977
837
0.954
3.000
1115
5.550
5.000
75
30.248
23.871
31
11.245
15.000
108
23.990
15.000
6
0.092
0.200
85
0.007
0.021
684
0.001
0.020
117
1.239
1.500
386
0.374
1.500
149
1.913
2.000
621
3.104
3.000
242
4.341
4.500
216
1.176
3.000
1089
0.182
0.167
1.442
52
856
20
82.85
1.4
50
3ASL
14019
1
1
1,2
92.6
1.40
1.45
1,2
79.5
data collection
ADSC
Quantum
phasing
SHELXS
refinement
REFMAC
5.5.0102
data reduction
HKL-2000
data scaling
HKL-2000
Structure of UHRF1 in complex with histone tail
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
ASP
326
A
ASP
29
HELX_P
A
ASP
328
A
ASP
31
5
1
3
A
TYR
343
A
TYR
46
HELX_P
A
LEU
345
A
LEU
48
5
2
3
metalc
2.341
A
ZN
1
C
ZN
ZN
1_555
A
CYS
302
A
SG
CYS
5
1_555
metalc
2.360
A
ZN
1
C
ZN
ZN
1_555
A
CYS
305
A
SG
CYS
8
1_555
metalc
2.305
A
ZN
1
C
ZN
ZN
1_555
A
CYS
313
A
SG
CYS
16
1_555
metalc
2.313
A
ZN
1
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
19
1_555
metalc
2.328
A
ZN
2
D
ZN
ZN
1_555
A
CYS
318
A
SG
CYS
21
1_555
metalc
2.362
A
ZN
2
D
ZN
ZN
1_555
A
CYS
321
A
SG
CYS
24
1_555
metalc
2.122
A
ZN
2
D
ZN
ZN
1_555
A
HIS
341
A
ND1
HIS
44
1_555
metalc
2.297
A
ZN
2
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
47
1_555
metalc
2.362
A
ZN
3
E
ZN
ZN
1_555
A
CYS
333
A
SG
CYS
36
1_555
metalc
2.340
A
ZN
3
E
ZN
ZN
1_555
A
CYS
336
A
SG
CYS
39
1_555
metalc
2.302
A
ZN
3
E
ZN
ZN
1_555
A
CYS
360
A
SG
CYS
63
1_555
metalc
2.333
A
ZN
3
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
66
1_555
metalc
1.971
A
ZN
4
F
ZN
ZN
1_555
A
HIS
319
A
NE2
HIS
22
1_555
metalc
2.385
A
ZN
4
F
ZN
ZN
1_555
A
GLU
362
A
OE1
GLU
65
1_555
LIGASE/DNA BINDING PROTEIN
histone reader module, epigenetic regulation, histone H3, LIGASE-DNA BINDING PROTEIN complex
A
ASP
346
A
ASP
49
1
A
PRO
347
A
PRO
50
-1.47
UHRF1_HUMAN
UNP
1
298
Q96T88
SGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDA
H33_HUMAN
UNP
2
2
P84243
ARTKQTARKST
298
367
3ASL
298
367
Q96T88
A
1
1
70
2
12
3ASL
1
11
P84243
B
2
1
11
2
anti-parallel
A
GLN
330
A
GLN
33
A
MET
332
A
MET
35
A
ALA
339
A
ALA
42
A
HIS
341
A
HIS
44
BINDING SITE FOR RESIDUE ZN A 1
A
ZN
1
Software
4
BINDING SITE FOR RESIDUE ZN A 2
A
ZN
2
Software
4
BINDING SITE FOR RESIDUE ZN A 3
A
ZN
3
Software
4
BINDING SITE FOR RESIDUE ZN A 4
A
ZN
4
Software
4
BINDING SITE FOR RESIDUE EDO A 368
A
EDO
368
Software
3
BINDING SITE FOR RESIDUE EDO A 369
A
EDO
369
Software
4
BINDING SITE FOR RESIDUE EDO A 370
A
EDO
370
Software
9
BINDING SITE FOR RESIDUE EDO B 12
B
EDO
12
Software
5
A
CYS
302
A
CYS
5
4
1_555
A
CYS
305
A
CYS
8
4
1_555
A
CYS
313
A
CYS
16
4
1_555
A
CYS
316
A
CYS
19
4
1_555
A
CYS
318
A
CYS
21
4
1_555
A
CYS
321
A
CYS
24
4
1_555
A
HIS
341
A
HIS
44
4
1_555
A
CYS
344
A
CYS
47
4
1_555
A
CYS
333
A
CYS
36
4
1_555
A
CYS
336
A
CYS
39
4
1_555
A
CYS
360
A
CYS
63
4
1_555
A
CYS
363
A
CYS
66
4
1_555
A
HIS
319
A
HIS
22
4
2_555
A
HIS
319
A
HIS
22
4
1_555
A
GLU
362
A
GLU
65
4
1_555
A
GLU
362
A
GLU
65
4
2_555
A
HOH
15
K
HOH
3
1_555
A
CYS
305
A
CYS
8
3
1_555
A
ARG
311
A
ARG
14
3
1_555
A
HOH
6
K
HOH
4
2_554
A
HOH
15
K
HOH
4
1_555
A
LEU
312
A
LEU
15
4
1_555
A
HOH
371
K
HOH
4
2_554
A
HOH
58
K
HOH
9
1_555
A
HOH
63
K
HOH
9
1_555
A
HOH
63
K
HOH
9
2_554
A
LEU
312
A
LEU
15
9
2_554
A
GLY
323
A
GLY
26
9
1_555
A
ARG
324
A
ARG
27
9
1_555
A
GLN
325
A
GLN
28
9
1_555
A
HIS
341
A
HIS
44
9
1_555
A
TYR
343
A
TYR
46
9
1_555
A
PRO
347
A
PRO
50
5
4_545
A
ARG
364
A
ARG
67
5
4_545
B
ALA
1
B
ALA
1
5
1_555
B
THR
3
B
THR
3
5
1_555
B
HOH
52
L
HOH
5
1_555
5
C 1 2 1