0.022457 0.000000 0.000000 0.000000 0.019290 0.000000 0.000000 0.000000 0.007553 0.00000 0.00000 0.00000 Itoh, S. Iijima, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 44.530 51.840 132.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C30 H44 O5 484.667 5-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}pentanoic acid non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H Y 88 N C N 89 N O Y 90 N C N 91 N O Y 92 N C Y 93 N C Y 94 N C Y 95 N C N 96 N C Y 97 N C N 98 N C N 99 N C N 100 N C N 101 N C Y 102 N C Y 103 N C Y 104 N C Y 105 N C Y 106 N C N 107 N C N 108 N C N 109 N O N 110 N C N 111 R C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N C N 117 N O N 118 N C N 119 N C N 120 N C N 121 N C N 122 N C N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N N N 168 S C N 169 N C N 170 N O N 171 N C N 172 N C N 173 N C N 174 N O N 175 N N N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N N N 188 S C N 189 N C N 190 N O N 191 N C N 192 N C N 193 N C N 194 N O N 195 N O N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 N C N 208 N C N 209 N O N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C Y 221 N C Y 222 N N Y 223 N C Y 224 N C Y 225 N N N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N O N 238 N H N 239 N H N 240 N N N 241 S C N 242 N C N 243 N O N 244 S C N 245 N C N 246 N C N 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N C N 269 N C N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C N 289 N C N 290 N C N 291 N C N 292 N N N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N N N 310 S C N 311 N C N 312 N O N 313 N C N 314 N C N 315 N S N 316 N C N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C N 357 N C N 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N O N 375 N O N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 R C N 388 N O N 389 N C N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N N N 401 S C N 402 N C N 403 N O N 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N N Y 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N N N 428 S C N 429 N C N 430 N O N 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N C Y 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N N N 452 S C N 453 N C N 454 N O N 455 N C N 456 N C N 457 N C N 458 N O N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing Y 83 N doub Y 84 N sing N 85 N sing N 86 N doub Y 87 N sing N 88 N sing N 89 N sing Y 90 N doub Y 91 N sing N 92 N sing Y 93 N doub N 94 N sing N 95 N sing N 96 N sing Y 97 N doub Y 98 N sing N 99 N sing N 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing Y 220 N sing Y 221 N doub Y 222 N doub N 223 N sing Y 224 N sing N 225 N sing Y 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing Y 328 N doub Y 329 N sing Y 330 N sing N 331 N sing Y 332 N doub N 333 N sing Y 334 N doub N 335 N sing Y 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub Y 402 N sing Y 403 N sing N 404 N sing Y 405 N sing Y 406 N doub N 407 N sing Y 408 N doub N 409 N sing Y 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing Y 425 N doub Y 426 N sing Y 427 N sing N 428 N sing Y 429 N doub N 430 N sing Y 431 N doub N 432 N sing Y 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N doub N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing UK Bioorg.Med.Chem. BMECEP 1200 0968-0896 19 4721 4729 10.1016/j.bmc.2011.07.001 21795053 Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis. 2011 10.2210/pdb3az2/pdb pdb_00003az2 100 1 IMAGE PLATE 2003-07-08 RIGAKU RAXIS Silicone SINGLE WAVELENGTH M x-ray 1 1.0 1.0 BL32B2 SPring-8 1.0 SYNCHROTRON SPRING-8 BEAMLINE BL32B2 fusion protein of residues 120-164 and residues 216-423 28746.260 Vitamin D3 receptor UNP RESIDUES 120-164, 216-423 1 man polymer 484.667 5-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}pentanoic acid 1 syn non-polymer 18.015 water 242 nat water VDR, 1,25-dihydroxyvitamin D3 receptor, Nuclear receptor subfamily 1 group I member 1 no no LRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPG FRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEH VLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEC SMKLTPLVLEVFG LRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPG FRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEH VLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEC SMKLTPLVLEVFG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 1 45 NR1I1, VDR 9606 Homo sapiens 562 Escherichia coli human sample 46 253 NR1I1, VDR 9606 Homo sapiens 562 Escherichia coli 1 2.66 53.73 0.300 hanging drop hanging drop entity_src_gen software chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Refinement description Source and taxonomy Data collection Database references Derived calculations 1 0 2011-11-02 1 1 2017-08-23 1 2 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PDBJ Y PDBJ 2011-05-20 REL REL DS3 5-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}pentanoic acid HOH water FUSION PROTEIN OF RESIDUES 120-164 AND RESIDUES 216-423 DS2 1 2 DS3 DS3 1 A HOH 2 3 HOH HOH 2 A HOH 3 3 HOH HOH 3 A HOH 4 3 HOH HOH 4 A HOH 5 3 HOH HOH 5 A HOH 6 3 HOH HOH 6 A HOH 7 3 HOH HOH 7 A HOH 8 3 HOH HOH 8 A HOH 9 3 HOH HOH 9 A HOH 10 3 HOH HOH 10 A HOH 11 3 HOH HOH 11 A HOH 12 3 HOH HOH 12 A HOH 13 3 HOH HOH 13 A HOH 14 3 HOH HOH 14 A HOH 15 3 HOH HOH 15 A HOH 16 3 HOH HOH 16 A HOH 17 3 HOH HOH 17 A HOH 18 3 HOH HOH 18 A HOH 19 3 HOH HOH 19 A HOH 20 3 HOH HOH 20 A HOH 21 3 HOH HOH 21 A HOH 22 3 HOH HOH 22 A HOH 23 3 HOH HOH 23 A HOH 24 3 HOH HOH 24 A HOH 25 3 HOH HOH 25 A HOH 26 3 HOH HOH 26 A HOH 27 3 HOH HOH 27 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 30 3 HOH HOH 30 A HOH 31 3 HOH HOH 31 A HOH 32 3 HOH HOH 32 A HOH 33 3 HOH HOH 33 A HOH 34 3 HOH HOH 34 A HOH 35 3 HOH HOH 35 A HOH 36 3 HOH HOH 36 A HOH 37 3 HOH HOH 37 A HOH 38 3 HOH HOH 38 A HOH 39 3 HOH HOH 39 A HOH 40 3 HOH HOH 40 A HOH 41 3 HOH HOH 41 A HOH 42 3 HOH HOH 42 A HOH 43 3 HOH HOH 43 A HOH 44 3 HOH HOH 44 A HOH 45 3 HOH HOH 45 A HOH 46 3 HOH HOH 46 A HOH 47 3 HOH HOH 47 A HOH 48 3 HOH HOH 48 A HOH 49 3 HOH HOH 49 A HOH 50 3 HOH HOH 50 A HOH 51 3 HOH HOH 51 A HOH 52 3 HOH HOH 52 A HOH 53 3 HOH HOH 53 A HOH 54 3 HOH HOH 54 A HOH 55 3 HOH HOH 55 A HOH 56 3 HOH HOH 56 A HOH 57 3 HOH HOH 57 A HOH 58 3 HOH HOH 58 A HOH 59 3 HOH HOH 59 A HOH 60 3 HOH HOH 60 A HOH 61 3 HOH HOH 61 A HOH 62 3 HOH HOH 62 A HOH 63 3 HOH HOH 63 A HOH 64 3 HOH HOH 64 A HOH 65 3 HOH HOH 65 A HOH 66 3 HOH HOH 66 A HOH 67 3 HOH HOH 67 A HOH 68 3 HOH HOH 68 A HOH 69 3 HOH HOH 69 A HOH 70 3 HOH HOH 70 A HOH 71 3 HOH HOH 71 A HOH 72 3 HOH HOH 72 A HOH 73 3 HOH HOH 73 A HOH 74 3 HOH HOH 74 A HOH 75 3 HOH HOH 75 A HOH 76 3 HOH HOH 76 A HOH 77 3 HOH HOH 77 A HOH 78 3 HOH HOH 78 A HOH 79 3 HOH HOH 79 A HOH 80 3 HOH HOH 80 A HOH 81 3 HOH HOH 81 A HOH 82 3 HOH HOH 82 A HOH 83 3 HOH HOH 83 A HOH 84 3 HOH HOH 84 A HOH 85 3 HOH HOH 85 A HOH 86 3 HOH HOH 86 A HOH 87 3 HOH HOH 87 A HOH 88 3 HOH HOH 88 A HOH 89 3 HOH HOH 89 A HOH 90 3 HOH HOH 90 A HOH 91 3 HOH HOH 91 A HOH 92 3 HOH HOH 92 A HOH 93 3 HOH HOH 93 A HOH 94 3 HOH HOH 94 A HOH 95 3 HOH HOH 95 A HOH 96 3 HOH HOH 96 A HOH 97 3 HOH HOH 97 A HOH 98 3 HOH HOH 98 A HOH 99 3 HOH HOH 99 A HOH 100 3 HOH HOH 100 A HOH 101 3 HOH HOH 101 A HOH 102 3 HOH HOH 102 A HOH 103 3 HOH HOH 103 A HOH 104 3 HOH HOH 104 A HOH 105 3 HOH HOH 105 A HOH 106 3 HOH HOH 106 A HOH 107 3 HOH HOH 107 A HOH 108 3 HOH HOH 108 A HOH 109 3 HOH HOH 109 A HOH 110 3 HOH HOH 110 A HOH 111 3 HOH HOH 111 A HOH 112 3 HOH HOH 112 A HOH 113 3 HOH HOH 113 A HOH 114 3 HOH HOH 114 A HOH 115 3 HOH HOH 115 A HOH 116 3 HOH HOH 116 A HOH 117 3 HOH HOH 117 A HOH 118 3 HOH HOH 118 A HOH 119 3 HOH HOH 119 A HOH 165 3 HOH HOH 165 A HOH 166 3 HOH HOH 166 A HOH 167 3 HOH HOH 167 A HOH 168 3 HOH HOH 168 A HOH 169 3 HOH HOH 169 A HOH 170 3 HOH HOH 170 A HOH 171 3 HOH HOH 171 A HOH 172 3 HOH HOH 172 A HOH 173 3 HOH HOH 173 A HOH 174 3 HOH HOH 174 A HOH 175 3 HOH HOH 175 A HOH 176 3 HOH HOH 176 A HOH 177 3 HOH HOH 177 A HOH 178 3 HOH HOH 178 A HOH 179 3 HOH HOH 179 A HOH 180 3 HOH HOH 180 A HOH 181 3 HOH HOH 181 A HOH 182 3 HOH HOH 182 A HOH 183 3 HOH HOH 183 A HOH 184 3 HOH HOH 184 A HOH 185 3 HOH HOH 185 A HOH 186 3 HOH HOH 186 A HOH 187 3 HOH HOH 187 A HOH 188 3 HOH HOH 188 A HOH 189 3 HOH HOH 189 A HOH 190 3 HOH HOH 190 A HOH 191 3 HOH HOH 191 A HOH 192 3 HOH HOH 192 A HOH 193 3 HOH HOH 193 A HOH 194 3 HOH HOH 194 A HOH 195 3 HOH HOH 195 A HOH 196 3 HOH HOH 196 A HOH 197 3 HOH HOH 197 A HOH 198 3 HOH HOH 198 A HOH 199 3 HOH HOH 199 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 203 3 HOH HOH 203 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A HOH 206 3 HOH HOH 206 A HOH 207 3 HOH HOH 207 A HOH 208 3 HOH HOH 208 A HOH 209 3 HOH HOH 209 A HOH 210 3 HOH HOH 210 A HOH 211 3 HOH HOH 211 A HOH 212 3 HOH HOH 212 A HOH 213 3 HOH HOH 213 A HOH 214 3 HOH HOH 214 A HOH 215 3 HOH HOH 215 A HOH 1 3 HOH HOH 424 A HOH 120 3 HOH HOH 425 A HOH 121 3 HOH HOH 426 A HOH 122 3 HOH HOH 427 A HOH 123 3 HOH HOH 428 A HOH 124 3 HOH HOH 429 A HOH 125 3 HOH HOH 430 A HOH 126 3 HOH HOH 431 A HOH 127 3 HOH HOH 432 A HOH 128 3 HOH HOH 433 A HOH 129 3 HOH HOH 434 A HOH 130 3 HOH HOH 435 A HOH 131 3 HOH HOH 436 A HOH 132 3 HOH HOH 437 A HOH 133 3 HOH HOH 438 A HOH 134 3 HOH HOH 439 A HOH 135 3 HOH HOH 440 A HOH 136 3 HOH HOH 441 A HOH 137 3 HOH HOH 442 A HOH 138 3 HOH HOH 443 A HOH 139 3 HOH HOH 444 A HOH 140 3 HOH HOH 445 A HOH 141 3 HOH HOH 446 A HOH 142 3 HOH HOH 447 A HOH 143 3 HOH HOH 448 A HOH 144 3 HOH HOH 449 A HOH 145 3 HOH HOH 450 A HOH 146 3 HOH HOH 451 A HOH 147 3 HOH HOH 452 A HOH 148 3 HOH HOH 453 A HOH 149 3 HOH HOH 454 A HOH 150 3 HOH HOH 455 A HOH 151 3 HOH HOH 456 A HOH 152 3 HOH HOH 457 A HOH 153 3 HOH HOH 458 A HOH 154 3 HOH HOH 459 A HOH 155 3 HOH HOH 460 A HOH 156 3 HOH HOH 461 A HOH 157 3 HOH HOH 462 A HOH 158 3 HOH HOH 463 A HOH 159 3 HOH HOH 464 A HOH 160 3 HOH HOH 465 A HOH 161 3 HOH HOH 466 A HOH 162 3 HOH HOH 467 A HOH 163 3 HOH HOH 468 A HOH 164 3 HOH HOH 469 A HOH 216 3 HOH HOH 470 A HOH 217 3 HOH HOH 471 A HOH 218 3 HOH HOH 472 A HOH 219 3 HOH HOH 473 A HOH 220 3 HOH HOH 474 A HOH 221 3 HOH HOH 475 A HOH 222 3 HOH HOH 476 A HOH 223 3 HOH HOH 477 A HOH 224 3 HOH HOH 478 A HOH 225 3 HOH HOH 479 A HOH 226 3 HOH HOH 480 A HOH 227 3 HOH HOH 481 A HOH 228 3 HOH HOH 482 A HOH 229 3 HOH HOH 483 A HOH 230 3 HOH HOH 484 A HOH 231 3 HOH HOH 485 A HOH 232 3 HOH HOH 486 A HOH 233 3 HOH HOH 487 A HOH 234 3 HOH HOH 488 A HOH 235 3 HOH HOH 489 A HOH 236 3 HOH HOH 490 A HOH 237 3 HOH HOH 491 A HOH 238 3 HOH HOH 492 A HOH 239 3 HOH HOH 493 A HOH 240 3 HOH HOH 494 A HOH 241 3 HOH HOH 495 A HOH 242 3 HOH HOH 496 A LEU 120 n 1 LEU 120 A ARG 121 n 2 ARG 121 A PRO 122 n 3 PRO 122 A LYS 123 n 4 LYS 123 A LEU 124 n 5 LEU 124 A SER 125 n 6 SER 125 A GLU 126 n 7 GLU 126 A GLU 127 n 8 GLU 127 A GLN 128 n 9 GLN 128 A GLN 129 n 10 GLN 129 A ARG 130 n 11 ARG 130 A ILE 131 n 12 ILE 131 A ILE 132 n 13 ILE 132 A ALA 133 n 14 ALA 133 A ILE 134 n 15 ILE 134 A LEU 135 n 16 LEU 135 A LEU 136 n 17 LEU 136 A ASP 137 n 18 ASP 137 A ALA 138 n 19 ALA 138 A HIS 139 n 20 HIS 139 A HIS 140 n 21 HIS 140 A LYS 141 n 22 LYS 141 A THR 142 n 23 THR 142 A TYR 143 n 24 TYR 143 A ASP 144 n 25 ASP 144 A PRO 145 n 26 PRO 145 A THR 146 n 27 THR 146 A TYR 147 n 28 TYR 147 A SER 148 n 29 SER 148 A ASP 149 n 30 ASP 149 A PHE 150 n 31 PHE 150 A CYS 151 n 32 CYS 151 A GLN 152 n 33 GLN 152 A PHE 153 n 34 PHE 153 A ARG 154 n 35 ARG 154 A PRO 155 n 36 PRO 155 A PRO 156 n 37 PRO 156 A VAL 157 n 38 VAL 157 A ARG 158 n 39 ARG 158 A VAL 159 n 40 VAL 159 A ASN 160 n 41 ASN 160 A ASP 161 n 42 ASP 161 A GLY 162 n 43 GLY 162 A GLY 163 n 44 GLY 163 A GLY 164 n 45 GLY 164 A SER 216 n 46 SER 216 A VAL 217 n 47 VAL 217 A THR 218 n 48 THR 218 A LEU 219 n 49 LEU 219 A GLU 220 n 50 GLU 220 A LEU 221 n 51 LEU 221 A SER 222 n 52 SER 222 A GLN 223 n 53 GLN 223 A LEU 224 n 54 LEU 224 A SER 225 n 55 SER 225 A MET 226 n 56 MET 226 A LEU 227 n 57 LEU 227 A PRO 228 n 58 PRO 228 A HIS 229 n 59 HIS 229 A LEU 230 n 60 LEU 230 A ALA 231 n 61 ALA 231 A ASP 232 n 62 ASP 232 A LEU 233 n 63 LEU 233 A VAL 234 n 64 VAL 234 A SER 235 n 65 SER 235 A TYR 236 n 66 TYR 236 A SER 237 n 67 SER 237 A ILE 238 n 68 ILE 238 A GLN 239 n 69 GLN 239 A LYS 240 n 70 LYS 240 A VAL 241 n 71 VAL 241 A ILE 242 n 72 ILE 242 A GLY 243 n 73 GLY 243 A PHE 244 n 74 PHE 244 A ALA 245 n 75 ALA 245 A LYS 246 n 76 LYS 246 A MET 247 n 77 MET 247 A ILE 248 n 78 ILE 248 A PRO 249 n 79 PRO 249 A GLY 250 n 80 GLY 250 A PHE 251 n 81 PHE 251 A ARG 252 n 82 ARG 252 A ASP 253 n 83 ASP 253 A LEU 254 n 84 LEU 254 A THR 255 n 85 THR 255 A SER 256 n 86 SER 256 A GLU 257 n 87 GLU 257 A ASP 258 n 88 ASP 258 A GLN 259 n 89 GLN 259 A ILE 260 n 90 ILE 260 A VAL 261 n 91 VAL 261 A LEU 262 n 92 LEU 262 A LEU 263 n 93 LEU 263 A LYS 264 n 94 LYS 264 A SER 265 n 95 SER 265 A SER 266 n 96 SER 266 A ALA 267 n 97 ALA 267 A ILE 268 n 98 ILE 268 A GLU 269 n 99 GLU 269 A VAL 270 n 100 VAL 270 A ILE 271 n 101 ILE 271 A MET 272 n 102 MET 272 A LEU 273 n 103 LEU 273 A ARG 274 n 104 ARG 274 A SER 275 n 105 SER 275 A ASN 276 n 106 ASN 276 A GLU 277 n 107 GLU 277 A SER 278 n 108 SER 278 A PHE 279 n 109 PHE 279 A THR 280 n 110 THR 280 A MET 281 n 111 MET 281 A ASP 282 n 112 ASP 282 A ASP 283 n 113 ASP 283 A MET 284 n 114 MET 284 A SER 285 n 115 SER 285 A TRP 286 n 116 TRP 286 A THR 287 n 117 THR 287 A CYS 288 n 118 CYS 288 A GLY 289 n 119 GLY 289 A ASN 290 n 120 ASN 290 A GLN 291 n 121 GLN 291 A ASP 292 n 122 ASP 292 A TYR 293 n 123 TYR 293 A LYS 294 n 124 LYS 294 A TYR 295 n 125 TYR 295 A ARG 296 n 126 ARG 296 A VAL 297 n 127 VAL 297 A SER 298 n 128 SER 298 A ASP 299 n 129 ASP 299 A VAL 300 n 130 VAL 300 A THR 301 n 131 THR 301 A LYS 302 n 132 LYS 302 A ALA 303 n 133 ALA 303 A GLY 304 n 134 GLY 304 A HIS 305 n 135 HIS 305 A SER 306 n 136 SER 306 A LEU 307 n 137 LEU 307 A GLU 308 n 138 GLU 308 A LEU 309 n 139 LEU 309 A ILE 310 n 140 ILE 310 A GLU 311 n 141 GLU 311 A PRO 312 n 142 PRO 312 A LEU 313 n 143 LEU 313 A ILE 314 n 144 ILE 314 A LYS 315 n 145 LYS 315 A PHE 316 n 146 PHE 316 A GLN 317 n 147 GLN 317 A VAL 318 n 148 VAL 318 A GLY 319 n 149 GLY 319 A LEU 320 n 150 LEU 320 A LYS 321 n 151 LYS 321 A LYS 322 n 152 LYS 322 A LEU 323 n 153 LEU 323 A ASN 324 n 154 ASN 324 A LEU 325 n 155 LEU 325 A HIS 326 n 156 HIS 326 A GLU 327 n 157 GLU 327 A GLU 328 n 158 GLU 328 A GLU 329 n 159 GLU 329 A HIS 330 n 160 HIS 330 A VAL 331 n 161 VAL 331 A LEU 332 n 162 LEU 332 A LEU 333 n 163 LEU 333 A MET 334 n 164 MET 334 A ALA 335 n 165 ALA 335 A ILE 336 n 166 ILE 336 A CYS 337 n 167 CYS 337 A ILE 338 n 168 ILE 338 A VAL 339 n 169 VAL 339 A SER 340 n 170 SER 340 A PRO 341 n 171 PRO 341 A ASP 342 n 172 ASP 342 A ARG 343 n 173 ARG 343 A PRO 344 n 174 PRO 344 A GLY 345 n 175 GLY 345 A VAL 346 n 176 VAL 346 A GLN 347 n 177 GLN 347 A ASP 348 n 178 ASP 348 A ALA 349 n 179 ALA 349 A ALA 350 n 180 ALA 350 A LEU 351 n 181 LEU 351 A ILE 352 n 182 ILE 352 A GLU 353 n 183 GLU 353 A ALA 354 n 184 ALA 354 A ILE 355 n 185 ILE 355 A GLN 356 n 186 GLN 356 A ASP 357 n 187 ASP 357 A ARG 358 n 188 ARG 358 A LEU 359 n 189 LEU 359 A SER 360 n 190 SER 360 A ASN 361 n 191 ASN 361 A THR 362 n 192 THR 362 A LEU 363 n 193 LEU 363 A GLN 364 n 194 GLN 364 A THR 365 n 195 THR 365 A TYR 366 n 196 TYR 366 A ILE 367 n 197 ILE 367 A ARG 368 n 198 ARG 368 A CYS 369 n 199 CYS 369 A ARG 370 n 200 ARG 370 A HIS 371 n 201 HIS 371 A PRO 372 n 202 PRO 372 A PRO 373 n 203 PRO 373 A PRO 374 n 204 PRO 374 A n 205 375 A n 206 376 A n 207 377 A LEU 378 n 208 LEU 378 A LEU 379 n 209 LEU 379 A TYR 380 n 210 TYR 380 A ALA 381 n 211 ALA 381 A LYS 382 n 212 LYS 382 A MET 383 n 213 MET 383 A ILE 384 n 214 ILE 384 A GLN 385 n 215 GLN 385 A LYS 386 n 216 LYS 386 A LEU 387 n 217 LEU 387 A ALA 388 n 218 ALA 388 A ASP 389 n 219 ASP 389 A LEU 390 n 220 LEU 390 A ARG 391 n 221 ARG 391 A SER 392 n 222 SER 392 A LEU 393 n 223 LEU 393 A ASN 394 n 224 ASN 394 A GLU 395 n 225 GLU 395 A GLU 396 n 226 GLU 396 A HIS 397 n 227 HIS 397 A SER 398 n 228 SER 398 A LYS 399 n 229 LYS 399 A GLN 400 n 230 GLN 400 A TYR 401 n 231 TYR 401 A ARG 402 n 232 ARG 402 A CYS 403 n 233 CYS 403 A LEU 404 n 234 LEU 404 A SER 405 n 235 SER 405 A PHE 406 n 236 PHE 406 A GLN 407 n 237 GLN 407 A PRO 408 n 238 PRO 408 A GLU 409 n 239 GLU 409 A CYS 410 n 240 CYS 410 A SER 411 n 241 SER 411 A MET 412 n 242 MET 412 A LYS 413 n 243 LYS 413 A LEU 414 n 244 LEU 414 A THR 415 n 245 THR 415 A PRO 416 n 246 PRO 416 A LEU 417 n 247 LEU 417 A VAL 418 n 248 VAL 418 A LEU 419 n 249 LEU 419 A GLU 420 n 250 GLU 420 A VAL 421 n 251 VAL 421 A PHE 422 n 252 PHE 422 A GLY 423 n 253 GLY 423 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 280 A N THR 110 A O SER 285 A O SER 115 A N TRP 286 A N TRP 116 A O TYR 295 A O TYR 125 1 A GLY 375 A GLY 205 1 Y 1 A SER 376 A SER 206 1 Y 1 A HIS 377 A HIS 207 1 Y 1 A ASP 161 -159.91 49.81 1 A ASP 283 -145.20 15.22 1 A ASP 342 -89.52 45.12 1 A GLN 347 -97.35 -69.66 1 A LEU 414 -99.26 -156.01 78.400 26.2390 10.750 -2.2873 0.0000 0.0000 -0.2990 0.0000 2.5863 0.9365 0.9345 0.2121 0.1951 0.1959 1.6900 17.1800 1573 30952 5.0800 88.0500 1.000 1.000 0.1100 RANDOM 1 THROUGHOUT 0.000 FOURIER SYNTHESIS 0.197 1.6900 17.1800 242 2270 35 0 1993 729 SINUSOIDAL 2.000 53 HARMONIC 2.000 288 HARMONIC 5.000 2067 HARMONIC 20.000 268 SEMIHARMONIC 5.000 2652 SEMIHARMONIC 4.000 0.010 2067 HARMONIC 2.000 0.950 2798 HARMONIC 2.000 2.680 15.540 0.2601 0.2159 0.2178 1.7500 91 1984 2075 16 4.3900 88.0500 1.418 31.311 3AZ2 38409 0.085 0.085 1 10.000 3.200 65.200 0.014 1.420 1.490 0.500 1440 1039 1.354 1 0.500 1.400 12.500 0.014 1.490 1.590 0.700 4815 2666 0.953 1 0.700 1.800 33.700 0.014 1.590 1.690 1.100 8914 3870 0.632 1 1.200 2.300 52.500 0.014 1.690 1.830 1.700 15374 5222 0.418 1 2.300 2.900 75.000 0.014 1.830 2.010 2.700 21394 5724 0.263 1 4.800 3.700 87.500 0.014 2.010 2.240 4.500 19498 5284 0.150 1 9.300 3.700 89.300 0.014 2.240 2.590 6.000 17814 4911 0.107 1 14.100 3.600 93.700 0.014 2.590 3.170 7.700 15586 4336 0.078 1 19.100 3.600 96.700 0.014 3.170 4.480 9.500 12281 3488 0.058 1 25.600 3.500 98.800 0.014 4.480 31.346 7.900 6257 1869 0.057 1 25.300 3.300 92.000 data reduction Andrew G.W. Leslie andrew@mrc-lmb.cam.ac.uk http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ MOSFLM package data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 28/7/2000 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 2.7.5 refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER-TNT program BUSTER 2.9.3 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 refinement BUSTER 2.9.3 Crystal Structure Analysis of Vitamin D receptor 1 N N 2 N N 3 N N A SER 125 A SER 6 HELX_P A TYR 143 A TYR 24 1 1 19 A ASP 149 A ASP 30 HELX_P A PHE 153 A PHE 34 5 2 5 A SER 216 A SER 46 HELX_P A LEU 224 A LEU 54 1 3 9 A MET 226 A MET 56 HELX_P A MET 247 A MET 77 1 4 22 A GLY 250 A GLY 80 HELX_P A LEU 254 A LEU 84 5 5 5 A THR 255 A THR 85 HELX_P A ASN 276 A ASN 106 1 6 22 A ASN 290 A ASN 120 HELX_P A ASP 292 A ASP 122 5 7 3 A ARG 296 A ARG 126 HELX_P A LYS 302 A LYS 132 1 8 7 A SER 306 A SER 136 HELX_P A LEU 323 A LEU 153 1 9 18 A HIS 326 A HIS 156 HELX_P A VAL 339 A VAL 169 1 10 14 A ASP 348 A ASP 178 HELX_P A HIS 371 A HIS 201 1 11 24 A LEU 378 A LEU 208 HELX_P A PHE 406 A PHE 236 1 12 29 A GLU 409 A GLU 239 HELX_P A LEU 414 A LEU 244 5 13 6 A THR 415 A THR 245 HELX_P A GLY 423 A GLY 253 1 14 9 HORMONE RECEPTOR Vitamin D receptor, HORMONE RECEPTOR A PRO 373 A PRO 203 1 A PRO 374 A PRO 204 -0.41 VDR_HUMAN UNP 1 120 P11473 LRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG VDR_HUMAN UNP 1 216 P11473 SVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKY RVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPG SHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFG 120 164 3AZ2 120 164 P11473 A 1 1 45 216 423 3AZ2 216 423 P11473 A 2 46 253 3 anti-parallel anti-parallel A PHE 279 A PHE 109 A THR 280 A THR 110 A SER 285 A SER 115 A THR 287 A THR 117 A LYS 294 A LYS 124 A TYR 295 A TYR 125 BINDING SITE FOR RESIDUE DS3 A 1 A DS3 1 Software 15 A HOH 20 C HOH 15 1_555 A THR 142 A THR 23 15 1_555 A TYR 143 A TYR 24 15 1_555 A ALA 231 A ALA 61 15 1_555 A VAL 234 A VAL 64 15 1_555 A TYR 236 A TYR 66 15 1_555 A SER 237 A SER 67 15 1_555 A ARG 274 A ARG 104 15 1_555 A SER 275 A SER 105 15 1_555 A SER 278 A SER 108 15 1_555 A TRP 286 A TRP 116 15 1_555 A CYS 288 A CYS 118 15 1_555 A HIS 305 A HIS 135 15 1_555 A HIS 397 A HIS 227 15 1_555 A LEU 404 A LEU 234 15 1_555 19 P 21 21 21