0.030303 0.017495 0.000000 0.000000 0.034991 0.000000 0.000000 0.000000 0.019220 0.00000 0.00000 0.00000 Meshcheryakov, V.A. Krieger, I. Kostyukova, A.S. Samatey, F.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 33.000 33.000 52.030 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N C N 65 N O N 66 N N N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N C N 85 N O N 86 N O N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N N N 98 N C N 99 N C N 100 N O N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C Y 112 N C Y 113 N N Y 114 N C Y 115 N C Y 116 N N N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N O N 129 N H N 130 N H N 131 N N N 132 S C N 133 N C N 134 N O N 135 S C N 136 N C N 137 N C N 138 N C N 139 N O N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N N N 154 S C N 155 N C N 156 N O N 157 N C N 158 N C N 159 N C N 160 N C N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 N C N 180 N C N 181 N C N 182 N C N 183 N N N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C N 205 N O N 206 N O N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 N C Y 219 N C Y 220 N C Y 221 N C Y 222 N C Y 223 N C Y 224 N C N 225 N O N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 N C N 243 N C N 244 N C N 245 N O N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N doub N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing Y 112 N sing Y 113 N doub Y 114 N doub N 115 N sing Y 116 N sing N 117 N sing Y 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing Y 214 N doub Y 215 N sing Y 216 N sing N 217 N sing Y 218 N doub N 219 N sing Y 220 N doub N 221 N sing Y 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N doub N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 67 822 825 10.1107/S090744491102645X 21904035 Structure of a tropomyosin N-terminal fragment at 0.98 A resolution 2011 10.2210/pdb3azd/pdb pdb_00003azd 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2009-04-18 RAYONIX MX225HE SI 111 SINGLE WAVELENGTH M x-ray 1 0.8 1.0 BL41XU SPring-8 0.8 SYNCHROTRON SPRING-8 BEAMLINE BL41XU chimera of short rat alpha-tropomyosin and yeast transcription factor GCN4 4274.863 short alpha-tropomyosin,transcription factor GCN4 2 syn polymer 18.015 water 91 nat water no no AGSSSLEAVRRKIRSLQEQNYHLENEVARLKKLVGER AGSSSLEAVRRKIRSLQEQNYHLENEVARLKKLVGER A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 1.91 35.71 VAPOR DIFFUSION, HANGING DROP 7.0 0.17M ammonium sulfate, 10% PEG 4000, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 entity pdbx_entity_src_syn chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Source and taxonomy Structure summary Data collection Database references Refinement description 1 0 2011-10-19 1 1 2017-06-14 1 2 2023-11-01 _entity.pdbx_description _database_2.pdbx_DOI _database_2.pdbx_database_accession PDBJ Y PDBJ 2011-05-23 REL REL HOH water Chemically synthesized tropomyosin fragment 10116 Rat Rattus norvegicus sample 1 19 Chemically synthesized tropomyosin fragment 559292 yeast Saccharomyces cerevisiae S288c sample 20 37 1IHQ 1IHQ model1 PDB experimental model HOH 38 2 HOH HOH 38 A HOH 2 2 HOH HOH 39 A HOH 8 2 HOH HOH 40 A HOH 41 2 HOH HOH 41 A HOH 42 2 HOH HOH 42 A HOH 10 2 HOH HOH 43 A HOH 44 2 HOH HOH 44 A HOH 11 2 HOH HOH 45 A HOH 46 2 HOH HOH 46 A HOH 12 2 HOH HOH 47 A HOH 48 2 HOH HOH 48 A HOH 13 2 HOH HOH 49 A HOH 50 2 HOH HOH 50 A HOH 51 2 HOH HOH 51 A HOH 52 2 HOH HOH 52 A HOH 53 2 HOH HOH 53 A HOH 54 2 HOH HOH 54 A HOH 14 2 HOH HOH 55 A HOH 15 2 HOH HOH 56 A HOH 19 2 HOH HOH 57 A HOH 21 2 HOH HOH 58 A HOH 22 2 HOH HOH 59 A HOH 23 2 HOH HOH 60 A HOH 61 2 HOH HOH 61 A HOH 25 2 HOH HOH 62 A HOH 63 2 HOH HOH 63 A HOH 27 2 HOH HOH 64 A HOH 65 2 HOH HOH 65 A HOH 66 2 HOH HOH 66 A HOH 29 2 HOH HOH 67 A HOH 30 2 HOH HOH 68 A HOH 31 2 HOH HOH 69 A HOH 70 2 HOH HOH 70 A HOH 32 2 HOH HOH 71 A HOH 72 2 HOH HOH 72 A HOH 73 2 HOH HOH 73 A HOH 33 2 HOH HOH 74 A HOH 75 2 HOH HOH 75 A HOH 76 2 HOH HOH 76 A HOH 36 2 HOH HOH 77 A HOH 78 2 HOH HOH 78 A HOH 81 2 HOH HOH 81 A HOH 85 2 HOH HOH 85 A HOH 86 2 HOH HOH 86 A HOH 87 2 HOH HOH 87 A HOH 1 2 HOH HOH 38 B HOH 39 2 HOH HOH 39 B HOH 40 2 HOH HOH 40 B HOH 3 2 HOH HOH 41 B HOH 4 2 HOH HOH 42 B HOH 43 2 HOH HOH 43 B HOH 5 2 HOH HOH 44 B HOH 45 2 HOH HOH 45 B HOH 6 2 HOH HOH 46 B HOH 47 2 HOH HOH 47 B HOH 7 2 HOH HOH 48 B HOH 49 2 HOH HOH 49 B HOH 9 2 HOH HOH 50 B HOH 16 2 HOH HOH 51 B HOH 17 2 HOH HOH 52 B HOH 18 2 HOH HOH 53 B HOH 20 2 HOH HOH 54 B HOH 55 2 HOH HOH 55 B HOH 56 2 HOH HOH 56 B HOH 57 2 HOH HOH 57 B HOH 58 2 HOH HOH 58 B HOH 59 2 HOH HOH 59 B HOH 60 2 HOH HOH 60 B HOH 24 2 HOH HOH 61 B HOH 62 2 HOH HOH 62 B HOH 26 2 HOH HOH 63 B HOH 64 2 HOH HOH 64 B HOH 28 2 HOH HOH 65 B HOH 34 2 HOH HOH 66 B HOH 67 2 HOH HOH 67 B HOH 68 2 HOH HOH 68 B HOH 69 2 HOH HOH 69 B HOH 35 2 HOH HOH 70 B HOH 71 2 HOH HOH 71 B HOH 37 2 HOH HOH 72 B HOH 74 2 HOH HOH 74 B HOH 77 2 HOH HOH 77 B HOH 79 2 HOH HOH 79 B HOH 80 2 HOH HOH 80 B HOH 82 2 HOH HOH 82 B HOH 83 2 HOH HOH 83 B HOH 84 2 HOH HOH 84 B HOH 88 2 HOH HOH 88 B HOH 89 2 HOH HOH 89 B HOH 90 2 HOH HOH 90 B HOH 91 2 HOH HOH 91 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A LEU 6 n 6 LEU 6 A GLU 7 n 7 GLU 7 A ALA 8 n 8 ALA 8 A VAL 9 n 9 VAL 9 A ARG 10 n 10 ARG 10 A ARG 11 n 11 ARG 11 A LYS 12 n 12 LYS 12 A ILE 13 n 13 ILE 13 A ARG 14 n 14 ARG 14 A SER 15 n 15 SER 15 A LEU 16 n 16 LEU 16 A GLN 17 n 17 GLN 17 A GLU 18 n 18 GLU 18 A GLN 19 n 19 GLN 19 A ASN 20 n 20 ASN 20 A TYR 21 n 21 TYR 21 A HIS 22 n 22 HIS 22 A LEU 23 n 23 LEU 23 A GLU 24 n 24 GLU 24 A ASN 25 n 25 ASN 25 A GLU 26 n 26 GLU 26 A VAL 27 n 27 VAL 27 A ALA 28 n 28 ALA 28 A ARG 29 n 29 ARG 29 A LEU 30 n 30 LEU 30 A LYS 31 n 31 LYS 31 A LYS 32 n 32 LYS 32 A LEU 33 n 33 LEU 33 A VAL 34 n 34 VAL 34 A GLY 35 n 35 GLY 35 A n 36 36 A n 37 37 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B LEU 6 n 6 LEU 6 B GLU 7 n 7 GLU 7 B ALA 8 n 8 ALA 8 B VAL 9 n 9 VAL 9 B ARG 10 n 10 ARG 10 B ARG 11 n 11 ARG 11 B LYS 12 n 12 LYS 12 B ILE 13 n 13 ILE 13 B ARG 14 n 14 ARG 14 B SER 15 n 15 SER 15 B LEU 16 n 16 LEU 16 B GLN 17 n 17 GLN 17 B GLU 18 n 18 GLU 18 B GLN 19 n 19 GLN 19 B ASN 20 n 20 ASN 20 B TYR 21 n 21 TYR 21 B HIS 22 n 22 HIS 22 B LEU 23 n 23 LEU 23 B GLU 24 n 24 GLU 24 B ASN 25 n 25 ASN 25 B GLU 26 n 26 GLU 26 B VAL 27 n 27 VAL 27 B ALA 28 n 28 ALA 28 B ARG 29 n 29 ARG 29 B LEU 30 n 30 LEU 30 B LYS 31 n 31 LYS 31 B LYS 32 n 32 LYS 32 B LEU 33 n 33 LEU 33 B VAL 34 n 34 VAL 34 B GLY 35 n 35 GLY 35 B n 36 36 B n 37 37 B author_and_software_defined_assembly PISA 2 dimeric 1460 -15 5230 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ALA 1 A ALA 1 1 Y 1 A GLY 2 A GLY 2 1 Y 1 A SER 3 A SER 3 1 Y 1 A SER 4 A SER 4 1 Y 1 A SER 5 A SER 5 1 Y 1 A GLU 36 A GLU 36 1 Y 1 A ARG 37 A ARG 37 1 Y 1 B ALA 1 B ALA 1 1 Y 1 B GLY 2 B GLY 2 1 Y 1 B SER 3 B SER 3 1 Y 1 B SER 4 B SER 4 1 Y 1 B SER 5 B SER 5 1 Y 1 B GLU 36 B GLU 36 1 Y 1 B ARG 37 B ARG 37 1 Y 1 A A O O ASN HOH 20 52 1.74 1 B B N O VAL HOH 27 42 1.92 1 B B O N LEU VAL 30 34 1.97 1 A A O O HOH HOH 42 53 1.97 1 A A CB O ARG HOH 10 48 1.98 1 B B N O ARG HOH 14 61 2.04 1 A B O O HOH HOH 45 60 2.05 1 A A O O ARG HOH 10 43 2.05 1 B B CA O VAL HOH 9 51 2.10 1 A A O O VAL HOH 9 61 2.12 1 A A CD1 O LEU HOH 23 72 2.14 1 B B N O VAL HOH 27 69 2.14 1 B B O O ARG HOH 10 61 2.18 1 A A CA O TYR HOH 21 52 2.18 1 A A OE1 O GLU HOH 26 45 2.19 1 A A N O GLY HOH 35 59 2.05 1_555 1_565 1 A TYR 21 -143.32 -11.44 1 A LEU 33 -122.37 -61.87 13.560 0.03 0.00 0.00 0.03 0.00 -0.06 0.966 0.961 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.17084 0.16737 0.16753 0.98 14.29 1799 34162 34162 5.0 98.74 0.144 0.008 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.005 0.80 0.80 1.40 1IHQ model1 MAXIMUM LIKELIHOOD MASK 0.98 14.29 91 595 0 0 504 0.019 0.022 506 2.415 1.983 672 7.904 5.000 58 37.527 22.857 28 22.180 15.000 112 21.712 15.000 8 0.130 0.200 76 0.008 0.020 364 1.403 1.500 296 1.875 2.000 472 2.744 3.000 210 3.017 4.500 200 0.328 0.319 1.005 135 2554 20 99.26 0.98 15.73 3AZD 34162 34162 0 0 1 98.7 0.98 1.03 1 100 data collection HKL-2000 phasing PHASES refinement REFMAC 5.5.0109 data reduction MOSFLM data scaling SCALA Crystal structure of tropomyosin N-terminal fragment at 0.98A resolution 1 N N 1 N N 2 N N 2 N N A LEU 6 A LEU 6 HELX_P A ASN 20 A ASN 20 1 1 15 A LEU 23 A LEU 23 HELX_P A LYS 32 A LYS 32 1 2 10 B LEU 6 B LEU 6 HELX_P B GLY 35 B GLY 35 1 3 30 ACTIN-BINDING PROTEIN coiled-coil, actin-binding protein, muscle protein Q6AZ25_RAT UNP 1 2 Q6AZ25 AGSSSLEAVRRKIRSLQEQ GCN4_YEAST UNP 1 264 P03069 NYHLENEVARLKKLVGER 2 20 3AZD 1 19 Q6AZ25 A 1 1 19 264 281 3AZD 20 37 P03069 A 2 20 37 2 20 3AZD 1 19 Q6AZ25 B 1 1 19 264 281 3AZD 20 37 P03069 B 2 20 37 144 P 31