0.010130
0.005849
0.000000
0.000000
0.011697
0.000000
0.000000
0.000000
0.007741
0.00000
0.00000
0.00000
Fujita-Sato, S.
Ito, S.
Isobe, T.
Ohyama, T.
Wakabayashi, K.
Morishita, K.
Ando, O.
Isono, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
98.716
98.716
129.176
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C41 H64 O14
780.938
DIGOXIN
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
C
N
90
S
C
N
91
N
O
N
92
N
C
N
93
R
C
N
94
N
C
N
95
N
C
N
96
R
C
N
97
S
C
N
98
S
C
N
99
N
C
N
100
R
C
N
101
N
O
N
102
S
C
N
103
S
C
N
104
N
O
N
105
N
C
N
106
N
C
N
107
R
C
N
108
N
C
N
109
N
C
N
110
R
C
N
111
S
C
N
112
S
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
C
N
122
S
C
N
123
N
O
N
124
S
C
N
125
N
O
N
126
S
C
N
127
N
O
N
128
S
C
N
129
N
O
N
130
S
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
R
C
N
135
N
O
N
136
R
C
N
137
N
O
N
138
R
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
N
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
O
N
235
N
O
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
N
C
N
248
N
C
N
249
N
O
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
Y
261
N
C
Y
262
N
N
Y
263
N
C
Y
264
N
C
Y
265
N
N
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
S
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
N
C
N
331
N
C
N
332
N
N
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
S
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
N
N
424
S
C
N
425
N
C
N
426
N
O
N
427
R
C
N
428
N
O
N
429
N
C
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
N
N
441
S
C
N
442
N
C
N
443
N
O
N
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
N
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
N
N
468
S
C
N
469
N
C
N
470
N
O
N
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
N
478
N
O
N
479
N
O
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
N
N
492
S
C
N
493
N
C
N
494
N
O
N
495
N
C
N
496
N
C
N
497
N
C
N
498
N
O
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
Y
266
N
sing
Y
267
N
doub
Y
268
N
doub
N
269
N
sing
Y
270
N
sing
N
271
N
sing
Y
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
Y
374
N
doub
Y
375
N
sing
Y
376
N
sing
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
doub
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
Y
443
N
doub
Y
444
N
sing
Y
445
N
sing
N
446
N
sing
Y
447
N
doub
Y
448
N
sing
Y
449
N
sing
N
450
N
sing
Y
451
N
sing
Y
452
N
doub
N
453
N
sing
Y
454
N
doub
N
455
N
sing
Y
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
Y
471
N
doub
Y
472
N
sing
Y
473
N
sing
N
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
doub
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
286
31409
31417
10.1074/jbc.M111.254003
21733845
Structural Basis of Digoxin That Antagonizes ROR{gamma}t Receptor Activity and Suppresses Th17 Cell Differentiation and Interleukin (IL)-17 Production
2011
10.2210/pdb3b0w/pdb
pdb_00003b0w
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-02-08
ADSC QUANTUM 210r
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
AR-NW12A
Photon Factory
1.000
SYNCHROTRON
PHOTON FACTORY BEAMLINE AR-NW12A
28307.824
Nuclear receptor ROR-gamma
LIGAND-BINDING DOMAIN, UNP residues 265-507
2
man
polymer
780.938
DIGOXIN
2
syn
non-polymer
18.015
water
73
nat
water
Nuclear receptor RZR-gamma, Nuclear receptor subfamily 1 group F member 3, Retinoid-related orphan receptor-gamma
no
no
ASLTEIEHLVQSVCKSYRETCQLRLEDLLRQRSNIFSREEVTGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMEL
CQNDQIVLLKAGAMEVVLVRMCRAYNADNRTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALYTALV
LINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQSILAKLPPKGKLRSLCSQHVERLQIFQHLHPIVVQAAFPPLYKE
LFS
ASLTEIEHLVQSVCKSYRETCQLRLEDLLRQRSNIFSREEVTGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMEL
CQNDQIVLLKAGAMEVVLVRMCRAYNADNRTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALYTALV
LINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQSILAKLPPKGKLRSLCSQHVERLQIFQHLHPIVVQAAFPPLYKE
LFS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
RORC, NR1F3, RORG, RZRG
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)
plasmid
pET-15b
1
3.21
61.67
VAPOR DIFFUSION, SITTING DROP
7.5
1.2M Na formate, 3% (v/v) 2-Methyl-2,4-pentanediol, 0.1M HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
295
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Database references
Structure summary
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2011-07-06
1
1
2011-07-13
1
2
2011-09-28
1
3
2017-10-11
1
4
2023-11-01
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2011-06-17
REL
REL
DGX
DIGOXIN
HOH
water
3L0L
PDB ENTRY 3L0L
PDB
experimental model
DGX
1
2
DGX
DGX
1
A
DGX
1
2
DGX
DGX
1
B
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
9
3
HOH
HOH
9
A
HOH
11
3
HOH
HOH
11
A
HOH
12
3
HOH
HOH
12
A
HOH
13
3
HOH
HOH
13
A
HOH
15
3
HOH
HOH
15
A
HOH
17
3
HOH
HOH
17
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
30
3
HOH
HOH
30
A
HOH
31
3
HOH
HOH
31
A
HOH
32
3
HOH
HOH
32
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
37
3
HOH
HOH
37
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
45
3
HOH
HOH
45
A
HOH
48
3
HOH
HOH
48
A
HOH
50
3
HOH
HOH
50
A
HOH
51
3
HOH
HOH
51
A
HOH
52
3
HOH
HOH
52
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
55
3
HOH
HOH
55
A
HOH
57
3
HOH
HOH
57
A
HOH
58
3
HOH
HOH
58
A
HOH
61
3
HOH
HOH
61
A
HOH
62
3
HOH
HOH
62
A
HOH
65
3
HOH
HOH
65
A
HOH
67
3
HOH
HOH
67
A
HOH
69
3
HOH
HOH
69
A
HOH
70
3
HOH
HOH
70
A
HOH
71
3
HOH
HOH
71
A
HOH
1
3
HOH
HOH
508
A
HOH
2
3
HOH
HOH
2
B
HOH
5
3
HOH
HOH
5
B
HOH
6
3
HOH
HOH
6
B
HOH
7
3
HOH
HOH
7
B
HOH
8
3
HOH
HOH
8
B
HOH
10
3
HOH
HOH
10
B
HOH
14
3
HOH
HOH
14
B
HOH
16
3
HOH
HOH
16
B
HOH
21
3
HOH
HOH
21
B
HOH
22
3
HOH
HOH
22
B
HOH
25
3
HOH
HOH
25
B
HOH
26
3
HOH
HOH
26
B
HOH
27
3
HOH
HOH
27
B
HOH
28
3
HOH
HOH
28
B
HOH
29
3
HOH
HOH
29
B
HOH
35
3
HOH
HOH
35
B
HOH
36
3
HOH
HOH
36
B
HOH
38
3
HOH
HOH
38
B
HOH
39
3
HOH
HOH
39
B
HOH
40
3
HOH
HOH
40
B
HOH
43
3
HOH
HOH
43
B
HOH
44
3
HOH
HOH
44
B
HOH
46
3
HOH
HOH
46
B
HOH
47
3
HOH
HOH
47
B
HOH
49
3
HOH
HOH
49
B
HOH
56
3
HOH
HOH
56
B
HOH
59
3
HOH
HOH
59
B
HOH
60
3
HOH
HOH
60
B
HOH
63
3
HOH
HOH
63
B
HOH
64
3
HOH
HOH
64
B
HOH
66
3
HOH
HOH
66
B
HOH
68
3
HOH
HOH
68
B
HOH
72
3
HOH
HOH
72
B
HOH
73
3
HOH
HOH
73
B
ALA
265
n
1
ALA
265
A
SER
266
n
2
SER
266
A
LEU
267
n
3
LEU
267
A
THR
268
n
4
THR
268
A
GLU
269
n
5
GLU
269
A
ILE
270
n
6
ILE
270
A
GLU
271
n
7
GLU
271
A
HIS
272
n
8
HIS
272
A
LEU
273
n
9
LEU
273
A
VAL
274
n
10
VAL
274
A
GLN
275
n
11
GLN
275
A
SER
276
n
12
SER
276
A
VAL
277
n
13
VAL
277
A
CYS
278
n
14
CYS
278
A
LYS
279
n
15
LYS
279
A
SER
280
n
16
SER
280
A
TYR
281
n
17
TYR
281
A
ARG
282
n
18
ARG
282
A
GLU
283
n
19
GLU
283
A
THR
284
n
20
THR
284
A
CYS
285
n
21
CYS
285
A
GLN
286
n
22
GLN
286
A
LEU
287
n
23
LEU
287
A
ARG
288
n
24
ARG
288
A
LEU
289
n
25
LEU
289
A
GLU
290
n
26
GLU
290
A
ASP
291
n
27
ASP
291
A
LEU
292
n
28
LEU
292
A
LEU
293
n
29
LEU
293
A
ARG
294
n
30
ARG
294
A
GLN
295
n
31
GLN
295
A
ARG
296
n
32
ARG
296
A
SER
297
n
33
SER
297
A
ASN
298
n
34
ASN
298
A
ILE
299
n
35
ILE
299
A
PHE
300
n
36
PHE
300
A
SER
301
n
37
SER
301
A
ARG
302
n
38
ARG
302
A
GLU
303
n
39
GLU
303
A
GLU
304
n
40
GLU
304
A
VAL
305
n
41
VAL
305
A
THR
306
n
42
THR
306
A
GLY
307
n
43
GLY
307
A
TYR
308
n
44
TYR
308
A
GLN
309
n
45
GLN
309
A
ARG
310
n
46
ARG
310
A
LYS
311
n
47
LYS
311
A
SER
312
n
48
SER
312
A
MET
313
n
49
MET
313
A
TRP
314
n
50
TRP
314
A
GLU
315
n
51
GLU
315
A
MET
316
n
52
MET
316
A
TRP
317
n
53
TRP
317
A
GLU
318
n
54
GLU
318
A
ARG
319
n
55
ARG
319
A
CYS
320
n
56
CYS
320
A
ALA
321
n
57
ALA
321
A
HIS
322
n
58
HIS
322
A
HIS
323
n
59
HIS
323
A
LEU
324
n
60
LEU
324
A
THR
325
n
61
THR
325
A
GLU
326
n
62
GLU
326
A
ALA
327
n
63
ALA
327
A
ILE
328
n
64
ILE
328
A
GLN
329
n
65
GLN
329
A
TYR
330
n
66
TYR
330
A
VAL
331
n
67
VAL
331
A
VAL
332
n
68
VAL
332
A
GLU
333
n
69
GLU
333
A
PHE
334
n
70
PHE
334
A
ALA
335
n
71
ALA
335
A
LYS
336
n
72
LYS
336
A
ARG
337
n
73
ARG
337
A
LEU
338
n
74
LEU
338
A
SER
339
n
75
SER
339
A
GLY
340
n
76
GLY
340
A
PHE
341
n
77
PHE
341
A
MET
342
n
78
MET
342
A
GLU
343
n
79
GLU
343
A
LEU
344
n
80
LEU
344
A
CYS
345
n
81
CYS
345
A
GLN
346
n
82
GLN
346
A
ASN
347
n
83
ASN
347
A
ASP
348
n
84
ASP
348
A
GLN
349
n
85
GLN
349
A
ILE
350
n
86
ILE
350
A
VAL
351
n
87
VAL
351
A
LEU
352
n
88
LEU
352
A
LEU
353
n
89
LEU
353
A
LYS
354
n
90
LYS
354
A
ALA
355
n
91
ALA
355
A
GLY
356
n
92
GLY
356
A
ALA
357
n
93
ALA
357
A
MET
358
n
94
MET
358
A
GLU
359
n
95
GLU
359
A
VAL
360
n
96
VAL
360
A
VAL
361
n
97
VAL
361
A
LEU
362
n
98
LEU
362
A
VAL
363
n
99
VAL
363
A
ARG
364
n
100
ARG
364
A
MET
365
n
101
MET
365
A
CYS
366
n
102
CYS
366
A
ARG
367
n
103
ARG
367
A
ALA
368
n
104
ALA
368
A
TYR
369
n
105
TYR
369
A
ASN
370
n
106
ASN
370
A
ALA
371
n
107
ALA
371
A
ASP
372
n
108
ASP
372
A
ASN
373
n
109
ASN
373
A
ARG
374
n
110
ARG
374
A
THR
375
n
111
THR
375
A
VAL
376
n
112
VAL
376
A
PHE
377
n
113
PHE
377
A
PHE
378
n
114
PHE
378
A
GLU
379
n
115
GLU
379
A
GLY
380
n
116
GLY
380
A
LYS
381
n
117
LYS
381
A
TYR
382
n
118
TYR
382
A
GLY
383
n
119
GLY
383
A
GLY
384
n
120
GLY
384
A
MET
385
n
121
MET
385
A
GLU
386
n
122
GLU
386
A
LEU
387
n
123
LEU
387
A
PHE
388
n
124
PHE
388
A
ARG
389
n
125
ARG
389
A
ALA
390
n
126
ALA
390
A
LEU
391
n
127
LEU
391
A
GLY
392
n
128
GLY
392
A
CYS
393
n
129
CYS
393
A
SER
394
n
130
SER
394
A
GLU
395
n
131
GLU
395
A
LEU
396
n
132
LEU
396
A
ILE
397
n
133
ILE
397
A
SER
398
n
134
SER
398
A
SER
399
n
135
SER
399
A
ILE
400
n
136
ILE
400
A
PHE
401
n
137
PHE
401
A
ASP
402
n
138
ASP
402
A
PHE
403
n
139
PHE
403
A
SER
404
n
140
SER
404
A
HIS
405
n
141
HIS
405
A
SER
406
n
142
SER
406
A
LEU
407
n
143
LEU
407
A
SER
408
n
144
SER
408
A
ALA
409
n
145
ALA
409
A
LEU
410
n
146
LEU
410
A
HIS
411
n
147
HIS
411
A
PHE
412
n
148
PHE
412
A
SER
413
n
149
SER
413
A
GLU
414
n
150
GLU
414
A
ASP
415
n
151
ASP
415
A
GLU
416
n
152
GLU
416
A
ILE
417
n
153
ILE
417
A
ALA
418
n
154
ALA
418
A
LEU
419
n
155
LEU
419
A
TYR
420
n
156
TYR
420
A
THR
421
n
157
THR
421
A
ALA
422
n
158
ALA
422
A
LEU
423
n
159
LEU
423
A
VAL
424
n
160
VAL
424
A
LEU
425
n
161
LEU
425
A
ILE
426
n
162
ILE
426
A
ASN
427
n
163
ASN
427
A
ALA
428
n
164
ALA
428
A
HIS
429
n
165
HIS
429
A
ARG
430
n
166
ARG
430
A
PRO
431
n
167
PRO
431
A
GLY
432
n
168
GLY
432
A
LEU
433
n
169
LEU
433
A
GLN
434
n
170
GLN
434
A
GLU
435
n
171
GLU
435
A
LYS
436
n
172
LYS
436
A
ARG
437
n
173
ARG
437
A
LYS
438
n
174
LYS
438
A
VAL
439
n
175
VAL
439
A
GLU
440
n
176
GLU
440
A
GLN
441
n
177
GLN
441
A
LEU
442
n
178
LEU
442
A
GLN
443
n
179
GLN
443
A
TYR
444
n
180
TYR
444
A
ASN
445
n
181
ASN
445
A
LEU
446
n
182
LEU
446
A
GLU
447
n
183
GLU
447
A
LEU
448
n
184
LEU
448
A
ALA
449
n
185
ALA
449
A
PHE
450
n
186
PHE
450
A
HIS
451
n
187
HIS
451
A
HIS
452
n
188
HIS
452
A
HIS
453
n
189
HIS
453
A
LEU
454
n
190
LEU
454
A
CYS
455
n
191
CYS
455
A
LYS
456
n
192
LYS
456
A
THR
457
n
193
THR
457
A
HIS
458
n
194
HIS
458
A
ARG
459
n
195
ARG
459
A
GLN
460
n
196
GLN
460
A
SER
461
n
197
SER
461
A
ILE
462
n
198
ILE
462
A
LEU
463
n
199
LEU
463
A
ALA
464
n
200
ALA
464
A
LYS
465
n
201
LYS
465
A
LEU
466
n
202
LEU
466
A
PRO
467
n
203
PRO
467
A
PRO
468
n
204
PRO
468
A
LYS
469
n
205
LYS
469
A
GLY
470
n
206
GLY
470
A
LYS
471
n
207
LYS
471
A
LEU
472
n
208
LEU
472
A
ARG
473
n
209
ARG
473
A
SER
474
n
210
SER
474
A
LEU
475
n
211
LEU
475
A
CYS
476
n
212
CYS
476
A
SER
477
n
213
SER
477
A
GLN
478
n
214
GLN
478
A
HIS
479
n
215
HIS
479
A
n
216
480
A
n
217
481
A
n
218
482
A
n
219
483
A
n
220
484
A
n
221
485
A
n
222
486
A
n
223
487
A
n
224
488
A
n
225
489
A
n
226
490
A
n
227
491
A
n
228
492
A
n
229
493
A
n
230
494
A
n
231
495
A
n
232
496
A
n
233
497
A
n
234
498
A
n
235
499
A
n
236
500
A
n
237
501
A
n
238
502
A
n
239
503
A
n
240
504
A
n
241
505
A
n
242
506
A
n
243
507
A
ALA
265
n
1
ALA
265
B
SER
266
n
2
SER
266
B
LEU
267
n
3
LEU
267
B
THR
268
n
4
THR
268
B
GLU
269
n
5
GLU
269
B
ILE
270
n
6
ILE
270
B
GLU
271
n
7
GLU
271
B
HIS
272
n
8
HIS
272
B
LEU
273
n
9
LEU
273
B
VAL
274
n
10
VAL
274
B
GLN
275
n
11
GLN
275
B
SER
276
n
12
SER
276
B
VAL
277
n
13
VAL
277
B
CYS
278
n
14
CYS
278
B
LYS
279
n
15
LYS
279
B
SER
280
n
16
SER
280
B
TYR
281
n
17
TYR
281
B
ARG
282
n
18
ARG
282
B
GLU
283
n
19
GLU
283
B
THR
284
n
20
THR
284
B
CYS
285
n
21
CYS
285
B
GLN
286
n
22
GLN
286
B
LEU
287
n
23
LEU
287
B
ARG
288
n
24
ARG
288
B
LEU
289
n
25
LEU
289
B
GLU
290
n
26
GLU
290
B
ASP
291
n
27
ASP
291
B
LEU
292
n
28
LEU
292
B
LEU
293
n
29
LEU
293
B
ARG
294
n
30
ARG
294
B
GLN
295
n
31
GLN
295
B
ARG
296
n
32
ARG
296
B
SER
297
n
33
SER
297
B
ASN
298
n
34
ASN
298
B
ILE
299
n
35
ILE
299
B
PHE
300
n
36
PHE
300
B
SER
301
n
37
SER
301
B
ARG
302
n
38
ARG
302
B
GLU
303
n
39
GLU
303
B
GLU
304
n
40
GLU
304
B
VAL
305
n
41
VAL
305
B
THR
306
n
42
THR
306
B
GLY
307
n
43
GLY
307
B
TYR
308
n
44
TYR
308
B
GLN
309
n
45
GLN
309
B
ARG
310
n
46
ARG
310
B
LYS
311
n
47
LYS
311
B
SER
312
n
48
SER
312
B
MET
313
n
49
MET
313
B
TRP
314
n
50
TRP
314
B
GLU
315
n
51
GLU
315
B
MET
316
n
52
MET
316
B
TRP
317
n
53
TRP
317
B
GLU
318
n
54
GLU
318
B
ARG
319
n
55
ARG
319
B
CYS
320
n
56
CYS
320
B
ALA
321
n
57
ALA
321
B
HIS
322
n
58
HIS
322
B
HIS
323
n
59
HIS
323
B
LEU
324
n
60
LEU
324
B
THR
325
n
61
THR
325
B
GLU
326
n
62
GLU
326
B
ALA
327
n
63
ALA
327
B
ILE
328
n
64
ILE
328
B
GLN
329
n
65
GLN
329
B
TYR
330
n
66
TYR
330
B
VAL
331
n
67
VAL
331
B
VAL
332
n
68
VAL
332
B
GLU
333
n
69
GLU
333
B
PHE
334
n
70
PHE
334
B
ALA
335
n
71
ALA
335
B
LYS
336
n
72
LYS
336
B
ARG
337
n
73
ARG
337
B
LEU
338
n
74
LEU
338
B
SER
339
n
75
SER
339
B
GLY
340
n
76
GLY
340
B
PHE
341
n
77
PHE
341
B
MET
342
n
78
MET
342
B
GLU
343
n
79
GLU
343
B
LEU
344
n
80
LEU
344
B
CYS
345
n
81
CYS
345
B
GLN
346
n
82
GLN
346
B
ASN
347
n
83
ASN
347
B
ASP
348
n
84
ASP
348
B
GLN
349
n
85
GLN
349
B
ILE
350
n
86
ILE
350
B
VAL
351
n
87
VAL
351
B
LEU
352
n
88
LEU
352
B
LEU
353
n
89
LEU
353
B
LYS
354
n
90
LYS
354
B
ALA
355
n
91
ALA
355
B
GLY
356
n
92
GLY
356
B
ALA
357
n
93
ALA
357
B
MET
358
n
94
MET
358
B
GLU
359
n
95
GLU
359
B
VAL
360
n
96
VAL
360
B
VAL
361
n
97
VAL
361
B
LEU
362
n
98
LEU
362
B
VAL
363
n
99
VAL
363
B
ARG
364
n
100
ARG
364
B
MET
365
n
101
MET
365
B
CYS
366
n
102
CYS
366
B
ARG
367
n
103
ARG
367
B
ALA
368
n
104
ALA
368
B
TYR
369
n
105
TYR
369
B
ASN
370
n
106
ASN
370
B
ALA
371
n
107
ALA
371
B
ASP
372
n
108
ASP
372
B
ASN
373
n
109
ASN
373
B
ARG
374
n
110
ARG
374
B
THR
375
n
111
THR
375
B
VAL
376
n
112
VAL
376
B
PHE
377
n
113
PHE
377
B
PHE
378
n
114
PHE
378
B
GLU
379
n
115
GLU
379
B
GLY
380
n
116
GLY
380
B
LYS
381
n
117
LYS
381
B
TYR
382
n
118
TYR
382
B
GLY
383
n
119
GLY
383
B
GLY
384
n
120
GLY
384
B
MET
385
n
121
MET
385
B
GLU
386
n
122
GLU
386
B
LEU
387
n
123
LEU
387
B
PHE
388
n
124
PHE
388
B
ARG
389
n
125
ARG
389
B
ALA
390
n
126
ALA
390
B
LEU
391
n
127
LEU
391
B
GLY
392
n
128
GLY
392
B
CYS
393
n
129
CYS
393
B
SER
394
n
130
SER
394
B
GLU
395
n
131
GLU
395
B
LEU
396
n
132
LEU
396
B
ILE
397
n
133
ILE
397
B
SER
398
n
134
SER
398
B
SER
399
n
135
SER
399
B
ILE
400
n
136
ILE
400
B
PHE
401
n
137
PHE
401
B
ASP
402
n
138
ASP
402
B
PHE
403
n
139
PHE
403
B
SER
404
n
140
SER
404
B
HIS
405
n
141
HIS
405
B
SER
406
n
142
SER
406
B
LEU
407
n
143
LEU
407
B
SER
408
n
144
SER
408
B
ALA
409
n
145
ALA
409
B
LEU
410
n
146
LEU
410
B
HIS
411
n
147
HIS
411
B
PHE
412
n
148
PHE
412
B
SER
413
n
149
SER
413
B
GLU
414
n
150
GLU
414
B
ASP
415
n
151
ASP
415
B
GLU
416
n
152
GLU
416
B
ILE
417
n
153
ILE
417
B
ALA
418
n
154
ALA
418
B
LEU
419
n
155
LEU
419
B
TYR
420
n
156
TYR
420
B
THR
421
n
157
THR
421
B
ALA
422
n
158
ALA
422
B
LEU
423
n
159
LEU
423
B
VAL
424
n
160
VAL
424
B
LEU
425
n
161
LEU
425
B
ILE
426
n
162
ILE
426
B
ASN
427
n
163
ASN
427
B
ALA
428
n
164
ALA
428
B
HIS
429
n
165
HIS
429
B
ARG
430
n
166
ARG
430
B
PRO
431
n
167
PRO
431
B
GLY
432
n
168
GLY
432
B
LEU
433
n
169
LEU
433
B
GLN
434
n
170
GLN
434
B
GLU
435
n
171
GLU
435
B
LYS
436
n
172
LYS
436
B
ARG
437
n
173
ARG
437
B
LYS
438
n
174
LYS
438
B
VAL
439
n
175
VAL
439
B
GLU
440
n
176
GLU
440
B
GLN
441
n
177
GLN
441
B
LEU
442
n
178
LEU
442
B
GLN
443
n
179
GLN
443
B
TYR
444
n
180
TYR
444
B
ASN
445
n
181
ASN
445
B
LEU
446
n
182
LEU
446
B
GLU
447
n
183
GLU
447
B
LEU
448
n
184
LEU
448
B
ALA
449
n
185
ALA
449
B
PHE
450
n
186
PHE
450
B
HIS
451
n
187
HIS
451
B
HIS
452
n
188
HIS
452
B
HIS
453
n
189
HIS
453
B
LEU
454
n
190
LEU
454
B
CYS
455
n
191
CYS
455
B
LYS
456
n
192
LYS
456
B
THR
457
n
193
THR
457
B
HIS
458
n
194
HIS
458
B
ARG
459
n
195
ARG
459
B
GLN
460
n
196
GLN
460
B
SER
461
n
197
SER
461
B
ILE
462
n
198
ILE
462
B
LEU
463
n
199
LEU
463
B
ALA
464
n
200
ALA
464
B
LYS
465
n
201
LYS
465
B
LEU
466
n
202
LEU
466
B
PRO
467
n
203
PRO
467
B
PRO
468
n
204
PRO
468
B
LYS
469
n
205
LYS
469
B
GLY
470
n
206
GLY
470
B
LYS
471
n
207
LYS
471
B
LEU
472
n
208
LEU
472
B
ARG
473
n
209
ARG
473
B
SER
474
n
210
SER
474
B
LEU
475
n
211
LEU
475
B
CYS
476
n
212
CYS
476
B
SER
477
n
213
SER
477
B
GLN
478
n
214
GLN
478
B
HIS
479
n
215
HIS
479
B
VAL
480
n
216
VAL
480
B
GLU
481
n
217
GLU
481
B
n
218
482
B
n
219
483
B
n
220
484
B
n
221
485
B
n
222
486
B
n
223
487
B
n
224
488
B
n
225
489
B
n
226
490
B
n
227
491
B
n
228
492
B
n
229
493
B
n
230
494
B
n
231
495
B
n
232
496
B
n
233
497
B
n
234
498
B
n
235
499
B
n
236
500
B
n
237
501
B
n
238
502
B
n
239
503
B
n
240
504
B
n
241
505
B
n
242
506
B
n
243
507
B
0.9365
-1.1366
-0.5592
3.0638
1.5881
1.5608
-0.0544
-0.0097
-0.0992
0.0328
-0.0445
0.0932
-0.0149
0.0223
0.0989
0.0062
-0.0079
0.0094
0.0557
-0.0292
0.0385
refined
22.1670
29.8764
3.4547
X-RAY DIFFRACTION
2.9870
-0.1367
-1.5796
0.7981
-0.2350
1.6535
-0.0094
0.0188
-0.1420
-0.0668
-0.1119
-0.0403
-0.0005
0.0283
0.1213
0.0331
0.0139
0.0053
0.0164
0.0058
0.0108
refined
19.0305
31.7393
-32.5883
X-RAY DIFFRACTION
A
265
A
479
X-RAY DIFFRACTION
1
B
265
B
481
X-RAY DIFFRACTION
2
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ASN
370
A
N
ASN
106
A
O
THR
375
A
O
THR
111
A
N
PHE
378
A
N
PHE
114
A
O
LYS
381
A
O
LYS
117
B
N
ASN
370
B
N
ASN
106
B
O
THR
375
B
O
THR
111
B
N
PHE
378
B
N
PHE
114
B
O
LYS
381
B
O
LYS
117
1
A
VAL
480
A
VAL
216
1
Y
1
A
GLU
481
A
GLU
217
1
Y
1
A
ARG
482
A
ARG
218
1
Y
1
A
LEU
483
A
LEU
219
1
Y
1
A
GLN
484
A
GLN
220
1
Y
1
A
ILE
485
A
ILE
221
1
Y
1
A
PHE
486
A
PHE
222
1
Y
1
A
GLN
487
A
GLN
223
1
Y
1
A
HIS
488
A
HIS
224
1
Y
1
A
LEU
489
A
LEU
225
1
Y
1
A
HIS
490
A
HIS
226
1
Y
1
A
PRO
491
A
PRO
227
1
Y
1
A
ILE
492
A
ILE
228
1
Y
1
A
VAL
493
A
VAL
229
1
Y
1
A
VAL
494
A
VAL
230
1
Y
1
A
GLN
495
A
GLN
231
1
Y
1
A
ALA
496
A
ALA
232
1
Y
1
A
ALA
497
A
ALA
233
1
Y
1
A
PHE
498
A
PHE
234
1
Y
1
A
PRO
499
A
PRO
235
1
Y
1
A
PRO
500
A
PRO
236
1
Y
1
A
LEU
501
A
LEU
237
1
Y
1
A
TYR
502
A
TYR
238
1
Y
1
A
LYS
503
A
LYS
239
1
Y
1
A
GLU
504
A
GLU
240
1
Y
1
A
LEU
505
A
LEU
241
1
Y
1
A
PHE
506
A
PHE
242
1
Y
1
A
SER
507
A
SER
243
1
Y
1
B
ARG
482
B
ARG
218
1
Y
1
B
LEU
483
B
LEU
219
1
Y
1
B
GLN
484
B
GLN
220
1
Y
1
B
ILE
485
B
ILE
221
1
Y
1
B
PHE
486
B
PHE
222
1
Y
1
B
GLN
487
B
GLN
223
1
Y
1
B
HIS
488
B
HIS
224
1
Y
1
B
LEU
489
B
LEU
225
1
Y
1
B
HIS
490
B
HIS
226
1
Y
1
B
PRO
491
B
PRO
227
1
Y
1
B
ILE
492
B
ILE
228
1
Y
1
B
VAL
493
B
VAL
229
1
Y
1
B
VAL
494
B
VAL
230
1
Y
1
B
GLN
495
B
GLN
231
1
Y
1
B
ALA
496
B
ALA
232
1
Y
1
B
ALA
497
B
ALA
233
1
Y
1
B
PHE
498
B
PHE
234
1
Y
1
B
PRO
499
B
PRO
235
1
Y
1
B
PRO
500
B
PRO
236
1
Y
1
B
LEU
501
B
LEU
237
1
Y
1
B
TYR
502
B
TYR
238
1
Y
1
B
LYS
503
B
LYS
239
1
Y
1
B
GLU
504
B
GLU
240
1
Y
1
B
LEU
505
B
LEU
241
1
Y
1
B
PHE
506
B
PHE
242
1
Y
1
B
SER
507
B
SER
243
1
Y
1
A
GLN
286
82.03
-62.51
1
A
GLU
435
-118.76
58.17
1
B
GLN
286
81.31
-62.06
1
B
GLU
435
-118.66
64.96
55.015
0.70
0.35
0.00
0.70
0.00
-1.06
0.944
0.925
0.24922
0.21176
0.21364
0.21364
2.20
20.0
1791
34265
34265
5.0
99.80
11.091
0.135
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.183
0.80
0.80
1.40
PDB ENTRY 3L0L
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.20
20.0
73
3699
110
0
3516
0.011
0.021
3708
1.258
1.990
5014
4.652
5.000
430
31.938
23.073
179
16.985
15.000
673
21.212
15.000
32
0.078
0.200
571
0.005
0.020
2694
0.663
1.500
2146
1.319
2.000
3441
2.161
3.000
1562
3.606
4.500
1573
0.302
0.238
2.256
146
2495
20
100.00
2.2
40.0
3B0W
36249
0.056
1
44.9
11.4
99.8
0.47
2.2
2.28
4.6
1
11.5
100.0
data collection
SERGUI
phasing
PHASER
refinement
REFMAC
5.5.0072
data reduction
HKL-2000
data scaling
HKL-2000
Crystal structure of the orphan nuclear receptor ROR(gamma)t ligand-binding domain in complex with digoxin
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
SER
266
A
SER
2
HELX_P
A
GLU
283
A
GLU
19
1
1
18
A
ARG
288
A
ARG
24
HELX_P
A
GLN
295
A
GLN
31
1
2
8
A
ARG
296
A
ARG
32
HELX_P
A
ASN
298
A
ASN
34
5
3
3
A
SER
301
A
SER
37
HELX_P
A
LYS
311
A
LYS
47
1
4
11
A
SER
312
A
SER
48
HELX_P
A
ARG
337
A
ARG
73
1
5
26
A
GLY
340
A
GLY
76
HELX_P
A
LEU
344
A
LEU
80
5
6
5
A
CYS
345
A
CYS
81
HELX_P
A
CYS
366
A
CYS
102
1
7
22
A
GLY
384
A
GLY
120
HELX_P
A
GLY
392
A
GLY
128
5
8
9
A
CYS
393
A
CYS
129
HELX_P
A
ALA
409
A
ALA
145
1
9
17
A
SER
413
A
SER
149
HELX_P
A
ILE
426
A
ILE
162
1
10
14
A
GLU
435
A
GLU
171
HELX_P
A
THR
457
A
THR
193
1
11
23
A
SER
461
A
SER
197
HELX_P
A
LEU
466
A
LEU
202
1
12
6
A
GLY
470
A
GLY
206
HELX_P
A
GLN
478
A
GLN
214
1
13
9
B
SER
266
B
SER
2
HELX_P
B
GLU
283
B
GLU
19
1
14
18
B
ARG
288
B
ARG
24
HELX_P
B
GLN
295
B
GLN
31
1
15
8
B
ARG
296
B
ARG
32
HELX_P
B
ASN
298
B
ASN
34
5
16
3
B
SER
301
B
SER
37
HELX_P
B
LYS
311
B
LYS
47
1
17
11
B
SER
312
B
SER
48
HELX_P
B
ARG
337
B
ARG
73
1
18
26
B
GLY
340
B
GLY
76
HELX_P
B
LEU
344
B
LEU
80
5
19
5
B
CYS
345
B
CYS
81
HELX_P
B
MET
365
B
MET
101
1
20
21
B
GLY
384
B
GLY
120
HELX_P
B
GLY
392
B
GLY
128
5
21
9
B
CYS
393
B
CYS
129
HELX_P
B
LEU
410
B
LEU
146
1
22
18
B
SER
413
B
SER
149
HELX_P
B
ILE
426
B
ILE
162
1
23
14
B
GLU
435
B
GLU
171
HELX_P
B
THR
457
B
THR
193
1
24
23
B
ARG
459
B
ARG
195
HELX_P
B
LEU
466
B
LEU
202
5
25
8
B
GLY
470
B
GLY
206
HELX_P
B
GLU
481
B
GLU
217
1
26
12
TRANSCRIPTION/INHIBITOR
THREE-LAYERED ALPHA HELICAL SANDWICH, ORPHAN NUCLEAR RECEPTOR, LIGAND-BINDING DOMAIN, ANTAGONIST, TRANSCRIPTION-INHIBITOR complex
RORG_HUMAN
UNP
1
265
P51449
ASLTEIEHLVQSVCKSYRETCQLRLEDLLRQRSNIFSREEVTGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMEL
CQNDQIVLLKAGAMEVVLVRMCRAYNADNRTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALYTALV
LINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQSILAKLPPKGKLRSLCSQHVERLQIFQHLHPIVVQAAFPPLYKE
LFS
265
507
3B0W
265
507
P51449
A
1
1
243
265
507
3B0W
265
507
P51449
B
1
1
243
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
369
A
TYR
105
A
ASN
370
A
ASN
106
A
THR
375
A
THR
111
A
PHE
378
A
PHE
114
A
LYS
381
A
LYS
117
A
GLY
383
A
GLY
119
B
TYR
369
B
TYR
105
B
ASN
370
B
ASN
106
B
THR
375
B
THR
111
B
PHE
378
B
PHE
114
B
LYS
381
B
LYS
117
B
GLY
383
B
GLY
119
BINDING SITE FOR RESIDUE DGX A 1
A
DGX
1
Software
14
BINDING SITE FOR RESIDUE DGX B 1
B
DGX
1
Software
14
A
HOH
11
E
HOH
14
1_555
A
HOH
12
E
HOH
14
1_555
A
GLU
271
A
GLU
7
14
5_554
A
LEU
287
A
LEU
23
14
1_555
A
CYS
320
A
CYS
56
14
1_555
A
ARG
364
A
ARG
100
14
1_555
A
MET
365
A
MET
101
14
1_555
A
ARG
367
A
ARG
103
14
1_555
A
ALA
368
A
ALA
104
14
1_555
A
PHE
377
A
PHE
113
14
1_555
A
LEU
391
A
LEU
127
14
1_555
A
CYS
393
A
CYS
129
14
1_555
A
LEU
396
A
LEU
132
14
1_555
A
HIS
479
A
HIS
215
14
1_555
B
HOH
8
F
HOH
14
1_555
B
HOH
73
F
HOH
14
1_555
B
GLU
271
B
GLU
7
14
6_555
B
GLN
275
B
GLN
11
14
6_555
B
LEU
287
B
LEU
23
14
1_555
B
CYS
320
B
CYS
56
14
1_555
B
ALA
321
B
ALA
57
14
1_555
B
MET
365
B
MET
101
14
1_555
B
ARG
367
B
ARG
103
14
1_555
B
PHE
377
B
PHE
113
14
1_555
B
PHE
388
B
PHE
124
14
1_555
B
LEU
391
B
LEU
127
14
1_555
B
LEU
396
B
LEU
132
14
1_555
B
HIS
479
B
HIS
215
14
1_555
169
P 61