0.020087
0.000000
0.000000
0.000000
0.017109
0.000000
0.000000
0.000000
0.013561
0.00000
0.00000
0.00000
Ugochukwu, E.
Burgess-Brown, N.
Berridge, G.
Elkins, J.
Bunkoczi, G.
Pike, A.C.W.
Sundstrom, M.
Arrowsmith, C.H.
Weigelt, J.
Edwards, A.M.
Gileadi, O.
von Delft, F.
Doyle, D.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
49.782
58.449
73.741
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
O
N
76
N
C
N
77
N
O
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
N
N
85
S
C
N
86
N
C
N
87
N
O
N
88
N
C
N
89
N
C
N
90
N
C
N
91
N
O
N
92
N
N
N
93
N
O
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
S
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
N
C
N
125
N
C
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
S
C
N
135
N
C
N
136
N
O
N
137
N
C
Y
138
N
C
Y
139
N
N
Y
140
N
C
Y
141
N
C
Y
142
N
N
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
N
N
158
S
C
N
159
N
C
N
160
N
O
N
161
S
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
N
N
202
S
C
N
203
N
C
N
204
N
O
N
205
N
C
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
N
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
N
231
N
C
N
232
N
S
N
233
N
C
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
NA
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
Y
136
N
sing
Y
137
N
doub
Y
138
N
doub
N
139
N
sing
Y
140
N
sing
N
141
N
sing
Y
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
Y
244
N
doub
Y
245
N
sing
Y
246
N
sing
N
247
N
sing
Y
248
N
doub
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
Y
313
N
doub
Y
314
N
sing
Y
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
Y
341
N
doub
Y
342
N
sing
Y
343
N
sing
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
To be Published
0353
Crystal structure of the third PDZ domain of human ligand-of-numb protein-X (LNX1) in complex with the C-terminal peptide from the coxsackievirus and adenovirus receptor.
10.2210/pdb3b76/pdb
pdb_00003b76
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2007-06-18
MARMOSAIC 225 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
0.99975
1.0
X10SA
SLS
0.99975
SYNCHROTRON
SLS BEAMLINE X10SA
12824.500
E3 ubiquitin-protein ligase LNX
6.3.2.-
Third PDZ domain: Residues 504-594
2
man
polymer
22.990
SODIUM ION
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
2
syn
non-polymer
18.015
water
124
nat
water
Numb-binding protein 1, Ligand of Numb-protein X 1
no
no
MHHHHHHSSGVDLGTENLYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLN
VDGVELTEVSRSEAVALLKRTSSSIVLKALEVKEGSIV
MHHHHHHSSGVDLGTENLYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLN
VDGVELTEVSRSEAVALLKRTSSSIVLKALEVKEGSIV
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
LNX1, LNX
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)-R3-Rosetta
Plasmid
pNIC28-Bsa4
1
2.09
41.19
VAPOR DIFFUSION, SITTING DROP
7.4
1.53M Potassium phosphate, 0.27M Sodium phosphate, 1% PEG 3350, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
Structural Genomics Consortium
SGC
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ncs_dom_lim
struct_ref_seq_dif
struct_site
repository
Initial release
Advisory
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2007-11-13
1
1
2011-07-13
1
2
2017-10-25
1
3
2023-08-30
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Synapse associated protein 97 PDZ2 domain variant C378G with C-terminal GluR-A peptide
SEQUENCE
This is a C-terminal peptide from the coxsackievirus
and adenovirus receptor.
Y
RCSB
Y
RCSB
2007-10-30
REL
REL
NA
SODIUM ION
EDO
1,2-ETHANEDIOL
HOH
water
2AWW
PDB entries 2AWW, 2BYG, 2AWX, 2AWU, 2G2L
PDB
experimental model
2BYG
PDB entries 2AWW, 2BYG, 2AWX, 2AWU, 2G2L
PDB
experimental model
2AWX
PDB entries 2AWW, 2BYG, 2AWX, 2AWU, 2G2L
PDB
experimental model
2AWU
PDB entries 2AWW, 2BYG, 2AWX, 2AWU, 2G2L
PDB
experimental model
2G2L
PDB entries 2AWW, 2BYG, 2AWX, 2AWU, 2G2L
PDB
experimental model
NA
1
2
NA
NA
601
A
EDO
1
3
EDO
EDO
601
B
EDO
2
3
EDO
EDO
602
B
HOH
2
4
HOH
HOH
2
A
HOH
4
4
HOH
HOH
4
A
HOH
5
4
HOH
HOH
5
A
HOH
7
4
HOH
HOH
7
A
HOH
12
4
HOH
HOH
12
A
HOH
13
4
HOH
HOH
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
22
4
HOH
HOH
22
A
HOH
25
4
HOH
HOH
25
A
HOH
26
4
HOH
HOH
26
A
HOH
30
4
HOH
HOH
30
A
HOH
36
4
HOH
HOH
36
A
HOH
40
4
HOH
HOH
40
A
HOH
44
4
HOH
HOH
44
A
HOH
47
4
HOH
HOH
47
A
HOH
52
4
HOH
HOH
52
A
HOH
56
4
HOH
HOH
56
A
HOH
59
4
HOH
HOH
59
A
HOH
62
4
HOH
HOH
62
A
HOH
63
4
HOH
HOH
63
A
HOH
70
4
HOH
HOH
70
A
HOH
73
4
HOH
HOH
73
A
HOH
76
4
HOH
HOH
76
A
HOH
78
4
HOH
HOH
78
A
HOH
81
4
HOH
HOH
81
A
HOH
82
4
HOH
HOH
82
A
HOH
86
4
HOH
HOH
86
A
HOH
87
4
HOH
HOH
87
A
HOH
88
4
HOH
HOH
88
A
HOH
89
4
HOH
HOH
89
A
HOH
91
4
HOH
HOH
91
A
HOH
95
4
HOH
HOH
95
A
HOH
97
4
HOH
HOH
97
A
HOH
98
4
HOH
HOH
98
A
HOH
102
4
HOH
HOH
102
A
HOH
103
4
HOH
HOH
103
A
HOH
110
4
HOH
HOH
110
A
HOH
112
4
HOH
HOH
112
A
HOH
114
4
HOH
HOH
114
A
HOH
115
4
HOH
HOH
115
A
HOH
116
4
HOH
HOH
116
A
HOH
119
4
HOH
HOH
119
A
HOH
121
4
HOH
HOH
121
A
HOH
122
4
HOH
HOH
122
A
HOH
123
4
HOH
HOH
123
A
HOH
124
4
HOH
HOH
124
A
HOH
125
4
HOH
HOH
125
A
HOH
126
4
HOH
HOH
126
A
HOH
130
4
HOH
HOH
130
A
HOH
133
4
HOH
HOH
133
A
HOH
134
4
HOH
HOH
134
A
HOH
135
4
HOH
HOH
135
A
HOH
136
4
HOH
HOH
136
A
HOH
138
4
HOH
HOH
138
A
HOH
139
4
HOH
HOH
139
A
HOH
144
4
HOH
HOH
144
A
HOH
145
4
HOH
HOH
145
A
HOH
3
4
HOH
HOH
3
B
HOH
6
4
HOH
HOH
6
B
HOH
8
4
HOH
HOH
8
B
HOH
11
4
HOH
HOH
11
B
HOH
16
4
HOH
HOH
16
B
HOH
23
4
HOH
HOH
23
B
HOH
24
4
HOH
HOH
24
B
HOH
27
4
HOH
HOH
27
B
HOH
28
4
HOH
HOH
28
B
HOH
29
4
HOH
HOH
29
B
HOH
31
4
HOH
HOH
31
B
HOH
32
4
HOH
HOH
32
B
HOH
33
4
HOH
HOH
33
B
HOH
37
4
HOH
HOH
37
B
HOH
38
4
HOH
HOH
38
B
HOH
39
4
HOH
HOH
39
B
HOH
41
4
HOH
HOH
41
B
HOH
42
4
HOH
HOH
42
B
HOH
45
4
HOH
HOH
45
B
HOH
48
4
HOH
HOH
48
B
HOH
49
4
HOH
HOH
49
B
HOH
50
4
HOH
HOH
50
B
HOH
51
4
HOH
HOH
51
B
HOH
60
4
HOH
HOH
60
B
HOH
61
4
HOH
HOH
61
B
HOH
64
4
HOH
HOH
64
B
HOH
65
4
HOH
HOH
65
B
HOH
71
4
HOH
HOH
71
B
HOH
72
4
HOH
HOH
72
B
HOH
74
4
HOH
HOH
74
B
HOH
77
4
HOH
HOH
77
B
HOH
79
4
HOH
HOH
79
B
HOH
80
4
HOH
HOH
80
B
HOH
84
4
HOH
HOH
84
B
HOH
85
4
HOH
HOH
85
B
HOH
90
4
HOH
HOH
90
B
HOH
92
4
HOH
HOH
92
B
HOH
93
4
HOH
HOH
93
B
HOH
94
4
HOH
HOH
94
B
HOH
96
4
HOH
HOH
96
B
HOH
99
4
HOH
HOH
99
B
HOH
100
4
HOH
HOH
100
B
HOH
101
4
HOH
HOH
101
B
HOH
104
4
HOH
HOH
104
B
HOH
105
4
HOH
HOH
105
B
HOH
106
4
HOH
HOH
106
B
HOH
107
4
HOH
HOH
107
B
HOH
108
4
HOH
HOH
108
B
HOH
109
4
HOH
HOH
109
B
HOH
111
4
HOH
HOH
111
B
HOH
113
4
HOH
HOH
113
B
HOH
117
4
HOH
HOH
117
B
HOH
118
4
HOH
HOH
118
B
HOH
120
4
HOH
HOH
120
B
HOH
127
4
HOH
HOH
127
B
HOH
128
4
HOH
HOH
128
B
HOH
129
4
HOH
HOH
129
B
HOH
131
4
HOH
HOH
131
B
HOH
132
4
HOH
HOH
132
B
HOH
137
4
HOH
HOH
137
B
HOH
140
4
HOH
HOH
140
B
HOH
141
4
HOH
HOH
141
B
HOH
142
4
HOH
HOH
142
B
HOH
143
4
HOH
HOH
143
B
n
1
385
A
n
2
386
A
n
3
387
A
n
4
388
A
n
5
389
A
n
6
390
A
n
7
391
A
n
8
392
A
n
9
393
A
n
10
394
A
n
11
395
A
n
12
396
A
n
13
397
A
n
14
398
A
n
15
399
A
n
16
400
A
n
17
401
A
LEU
402
n
18
LEU
402
A
TYR
403
n
19
TYR
403
A
PHE
404
n
20
PHE
404
A
GLN
405
n
21
GLN
405
A
SER
406
n
22
SER
406
A
MET
407
n
23
MET
407
A
HIS
408
n
24
HIS
408
A
GLU
409
n
25
GLU
409
A
LYS
410
n
26
LYS
410
A
VAL
411
n
27
VAL
411
A
VAL
412
n
28
VAL
412
A
ASN
413
n
29
ASN
413
A
ILE
414
n
30
ILE
414
A
GLN
415
n
31
GLN
415
A
LYS
416
n
32
LYS
416
A
ASP
417
n
33
ASP
417
A
PRO
418
n
34
PRO
418
A
GLY
419
n
35
GLY
419
A
GLU
420
n
36
GLU
420
A
SER
421
n
37
SER
421
A
LEU
422
n
38
LEU
422
A
GLY
423
n
39
GLY
423
A
MET
424
n
40
MET
424
A
THR
425
n
41
THR
425
A
VAL
426
n
42
VAL
426
A
ALA
427
n
43
ALA
427
A
GLY
428
n
44
GLY
428
A
GLY
429
n
45
GLY
429
A
ALA
430
n
46
ALA
430
A
SER
431
n
47
SER
431
A
HIS
432
n
48
HIS
432
A
ARG
433
n
49
ARG
433
A
GLU
434
n
50
GLU
434
A
TRP
435
n
51
TRP
435
A
ASP
436
n
52
ASP
436
A
LEU
437
n
53
LEU
437
A
PRO
438
n
54
PRO
438
A
ILE
439
n
55
ILE
439
A
TYR
440
n
56
TYR
440
A
VAL
441
n
57
VAL
441
A
ILE
442
n
58
ILE
442
A
SER
443
n
59
SER
443
A
VAL
444
n
60
VAL
444
A
GLU
445
n
61
GLU
445
A
PRO
446
n
62
PRO
446
A
GLY
447
n
63
GLY
447
A
GLY
448
n
64
GLY
448
A
VAL
449
n
65
VAL
449
A
ILE
450
n
66
ILE
450
A
SER
451
n
67
SER
451
A
ARG
452
n
68
ARG
452
A
ASP
453
n
69
ASP
453
A
GLY
454
n
70
GLY
454
A
ARG
455
n
71
ARG
455
A
ILE
456
n
72
ILE
456
A
LYS
457
n
73
LYS
457
A
THR
458
n
74
THR
458
A
GLY
459
n
75
GLY
459
A
ASP
460
n
76
ASP
460
A
ILE
461
n
77
ILE
461
A
LEU
462
n
78
LEU
462
A
LEU
463
n
79
LEU
463
A
ASN
464
n
80
ASN
464
A
VAL
465
n
81
VAL
465
A
ASP
466
n
82
ASP
466
A
GLY
467
n
83
GLY
467
A
VAL
468
n
84
VAL
468
A
GLU
469
n
85
GLU
469
A
LEU
470
n
86
LEU
470
A
THR
471
n
87
THR
471
A
GLU
472
n
88
GLU
472
A
VAL
473
n
89
VAL
473
A
SER
474
n
90
SER
474
A
ARG
475
n
91
ARG
475
A
SER
476
n
92
SER
476
A
GLU
477
n
93
GLU
477
A
ALA
478
n
94
ALA
478
A
VAL
479
n
95
VAL
479
A
ALA
480
n
96
ALA
480
A
LEU
481
n
97
LEU
481
A
LEU
482
n
98
LEU
482
A
LYS
483
n
99
LYS
483
A
ARG
484
n
100
ARG
484
A
THR
485
n
101
THR
485
A
SER
486
n
102
SER
486
A
SER
487
n
103
SER
487
A
SER
488
n
104
SER
488
A
ILE
489
n
105
ILE
489
A
VAL
490
n
106
VAL
490
A
LEU
491
n
107
LEU
491
A
LYS
492
n
108
LYS
492
A
ALA
493
n
109
ALA
493
A
LEU
494
n
110
LEU
494
A
GLU
495
n
111
GLU
495
A
VAL
496
n
112
VAL
496
A
LYS
497
n
113
LYS
497
A
GLU
498
n
114
GLU
498
A
GLY
499
n
115
GLY
499
A
SER
500
n
116
SER
500
A
ILE
501
n
117
ILE
501
A
VAL
502
n
118
VAL
502
A
n
1
385
B
n
2
386
B
n
3
387
B
n
4
388
B
n
5
389
B
n
6
390
B
n
7
391
B
n
8
392
B
n
9
393
B
n
10
394
B
n
11
395
B
n
12
396
B
n
13
397
B
n
14
398
B
n
15
399
B
n
16
400
B
ASN
401
n
17
ASN
401
B
LEU
402
n
18
LEU
402
B
TYR
403
n
19
TYR
403
B
PHE
404
n
20
PHE
404
B
GLN
405
n
21
GLN
405
B
SER
406
n
22
SER
406
B
MET
407
n
23
MET
407
B
HIS
408
n
24
HIS
408
B
GLU
409
n
25
GLU
409
B
LYS
410
n
26
LYS
410
B
VAL
411
n
27
VAL
411
B
VAL
412
n
28
VAL
412
B
ASN
413
n
29
ASN
413
B
ILE
414
n
30
ILE
414
B
GLN
415
n
31
GLN
415
B
LYS
416
n
32
LYS
416
B
ASP
417
n
33
ASP
417
B
PRO
418
n
34
PRO
418
B
GLY
419
n
35
GLY
419
B
GLU
420
n
36
GLU
420
B
SER
421
n
37
SER
421
B
LEU
422
n
38
LEU
422
B
GLY
423
n
39
GLY
423
B
MET
424
n
40
MET
424
B
THR
425
n
41
THR
425
B
VAL
426
n
42
VAL
426
B
ALA
427
n
43
ALA
427
B
GLY
428
n
44
GLY
428
B
GLY
429
n
45
GLY
429
B
ALA
430
n
46
ALA
430
B
SER
431
n
47
SER
431
B
HIS
432
n
48
HIS
432
B
ARG
433
n
49
ARG
433
B
GLU
434
n
50
GLU
434
B
TRP
435
n
51
TRP
435
B
ASP
436
n
52
ASP
436
B
LEU
437
n
53
LEU
437
B
PRO
438
n
54
PRO
438
B
ILE
439
n
55
ILE
439
B
TYR
440
n
56
TYR
440
B
VAL
441
n
57
VAL
441
B
ILE
442
n
58
ILE
442
B
SER
443
n
59
SER
443
B
VAL
444
n
60
VAL
444
B
GLU
445
n
61
GLU
445
B
PRO
446
n
62
PRO
446
B
GLY
447
n
63
GLY
447
B
GLY
448
n
64
GLY
448
B
VAL
449
n
65
VAL
449
B
ILE
450
n
66
ILE
450
B
SER
451
n
67
SER
451
B
ARG
452
n
68
ARG
452
B
ASP
453
n
69
ASP
453
B
GLY
454
n
70
GLY
454
B
ARG
455
n
71
ARG
455
B
ILE
456
n
72
ILE
456
B
LYS
457
n
73
LYS
457
B
THR
458
n
74
THR
458
B
GLY
459
n
75
GLY
459
B
ASP
460
n
76
ASP
460
B
ILE
461
n
77
ILE
461
B
LEU
462
n
78
LEU
462
B
LEU
463
n
79
LEU
463
B
ASN
464
n
80
ASN
464
B
VAL
465
n
81
VAL
465
B
ASP
466
n
82
ASP
466
B
GLY
467
n
83
GLY
467
B
VAL
468
n
84
VAL
468
B
GLU
469
n
85
GLU
469
B
LEU
470
n
86
LEU
470
B
THR
471
n
87
THR
471
B
GLU
472
n
88
GLU
472
B
VAL
473
n
89
VAL
473
B
SER
474
n
90
SER
474
B
ARG
475
n
91
ARG
475
B
SER
476
n
92
SER
476
B
GLU
477
n
93
GLU
477
B
ALA
478
n
94
ALA
478
B
VAL
479
n
95
VAL
479
B
ALA
480
n
96
ALA
480
B
LEU
481
n
97
LEU
481
B
LEU
482
n
98
LEU
482
B
LYS
483
n
99
LYS
483
B
ARG
484
n
100
ARG
484
B
THR
485
n
101
THR
485
B
SER
486
n
102
SER
486
B
SER
487
n
103
SER
487
B
SER
488
n
104
SER
488
B
ILE
489
n
105
ILE
489
B
VAL
490
n
106
VAL
490
B
LEU
491
n
107
LEU
491
B
LYS
492
n
108
LYS
492
B
ALA
493
n
109
ALA
493
B
LEU
494
n
110
LEU
494
B
GLU
495
n
111
GLU
495
B
VAL
496
n
112
VAL
496
B
LYS
497
n
113
LYS
497
B
GLU
498
n
114
GLU
498
B
GLY
499
n
115
GLY
499
B
SER
500
n
116
SER
500
B
ILE
501
n
117
ILE
501
B
VAL
502
n
118
VAL
502
B
0.7420
-0.0921
-0.2055
1.5999
-0.0270
0.6760
0.0358
0.0660
0.0180
-0.1887
0.0160
-0.0556
0.0023
0.0640
-0.0519
-0.0118
0.0061
0.0136
-0.0431
-0.0007
-0.0459
refined
6.6160
13.8179
14.0596
X-RAY DIFFRACTION
1.3140
0.3064
-0.9489
0.4896
0.1707
1.8422
-0.0102
-0.0431
-0.0461
-0.0479
-0.0355
0.0400
-0.0581
-0.0197
0.0457
-0.0386
0.0041
-0.0075
-0.0481
-0.0162
-0.0327
refined
-5.6220
8.5963
29.6785
X-RAY DIFFRACTION
A
402
A
18
A
502
A
118
X-RAY DIFFRACTION
1
B
401
B
17
B
502
B
118
X-RAY DIFFRACTION
2
software_defined_assembly
PISA
2
dimeric
3050
A
HOH
115
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
HOH
136
F
O
HOH
1_555
99.3
A
HOH
115
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
ALA
430
A
O
ALA
46
1_555
83.9
A
HOH
136
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
ALA
430
A
O
ALA
46
1_555
176.8
A
HOH
115
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
HIS
432
A
O
HIS
48
1_555
80.1
A
HOH
136
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
HIS
432
A
O
HIS
48
1_555
93.2
A
ALA
430
A
O
ALA
46
1_555
A
NA
601
C
NA
NA
1_555
A
HIS
432
A
O
HIS
48
1_555
87.3
A
HOH
115
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
TRP
435
A
O
TRP
51
1_555
154.4
A
HOH
136
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
TRP
435
A
O
TRP
51
1_555
84.1
A
ALA
430
A
O
ALA
46
1_555
A
NA
601
C
NA
NA
1_555
A
TRP
435
A
O
TRP
51
1_555
93.0
A
HIS
432
A
O
HIS
48
1_555
A
NA
601
C
NA
NA
1_555
A
TRP
435
A
O
TRP
51
1_555
74.4
A
HOH
115
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
ASP
436
A
OD1
ASP
52
1_555
134.9
A
HOH
136
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
A
ASP
436
A
OD1
ASP
52
1_555
79.9
A
ALA
430
A
O
ALA
46
1_555
A
NA
601
C
NA
NA
1_555
A
ASP
436
A
OD1
ASP
52
1_555
97.9
A
HIS
432
A
O
HIS
48
1_555
A
NA
601
C
NA
NA
1_555
A
ASP
436
A
OD1
ASP
52
1_555
144.9
A
TRP
435
A
O
TRP
51
1_555
A
NA
601
C
NA
NA
1_555
A
ASP
436
A
OD1
ASP
52
1_555
70.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
412
A
N
VAL
28
A
O
LEU
491
A
O
LEU
107
A
O
LYS
492
A
O
LYS
108
A
N
LEU
463
A
N
LEU
79
A
N
VAL
465
A
N
VAL
81
A
O
VAL
468
A
O
VAL
84
A
N
VAL
412
A
N
VAL
28
A
O
LEU
491
A
O
LEU
107
A
O
LYS
492
A
O
LYS
108
A
N
LEU
463
A
N
LEU
79
A
O
LEU
462
A
O
LEU
78
A
N
ILE
439
A
N
ILE
55
A
O
TYR
440
A
O
TYR
56
A
N
ALA
427
A
N
ALA
43
A
N
MET
424
A
N
MET
40
B
O
VAL
502
B
O
VAL
118
A
N
VAL
502
A
N
VAL
118
B
O
MET
424
B
O
MET
40
B
N
ALA
427
B
N
ALA
43
B
O
TYR
440
B
O
TYR
56
B
N
VAL
412
B
N
VAL
28
B
O
LEU
491
B
O
LEU
107
B
O
LEU
494
B
O
LEU
110
B
N
ILE
461
B
N
ILE
77
B
N
VAL
465
B
N
VAL
81
B
O
VAL
468
B
O
VAL
84
B
N
HIS
432
B
N
HIS
48
B
O
TRP
435
B
O
TRP
51
1
A
CD
GLN
415
A
CD
GLN
31
1
Y
1
A
OE1
GLN
415
A
OE1
GLN
31
1
Y
1
A
NE2
GLN
415
A
NE2
GLN
31
1
Y
1
A
NZ
LYS
492
A
NZ
LYS
108
1
Y
1
B
CG
ASN
401
B
CG
ASN
17
1
Y
1
B
OD1
ASN
401
B
OD1
ASN
17
1
Y
1
B
ND2
ASN
401
B
ND2
ASN
17
1
Y
1
B
CG
ARG
433
B
CG
ARG
49
1
Y
1
B
CD
ARG
433
B
CD
ARG
49
1
Y
1
B
NE
ARG
433
B
NE
ARG
49
1
Y
1
B
CZ
ARG
433
B
CZ
ARG
49
1
Y
1
B
NH1
ARG
433
B
NH1
ARG
49
1
Y
1
B
NH2
ARG
433
B
NH2
ARG
49
1
Y
1
B
CG
GLU
434
B
CG
GLU
50
1
Y
1
B
CD
GLU
434
B
CD
GLU
50
1
Y
1
B
OE1
GLU
434
B
OE1
GLU
50
1
Y
1
B
OE2
GLU
434
B
OE2
GLU
50
1
Y
1
B
CG
LYS
497
B
CG
LYS
113
1
Y
1
B
CD
LYS
497
B
CD
LYS
113
1
Y
1
B
CE
LYS
497
B
CE
LYS
113
1
Y
1
B
NZ
LYS
497
B
NZ
LYS
113
1
Y
1
B
CG
GLU
498
B
CG
GLU
114
1
Y
1
B
CD
GLU
498
B
CD
GLU
114
1
Y
1
B
OE1
GLU
498
B
OE1
GLU
114
1
Y
1
B
OE2
GLU
498
B
OE2
GLU
114
1
Y
1
A
MET
385
A
MET
1
1
Y
1
A
HIS
386
A
HIS
2
1
Y
1
A
HIS
387
A
HIS
3
1
Y
1
A
HIS
388
A
HIS
4
1
Y
1
A
HIS
389
A
HIS
5
1
Y
1
A
HIS
390
A
HIS
6
1
Y
1
A
HIS
391
A
HIS
7
1
Y
1
A
SER
392
A
SER
8
1
Y
1
A
SER
393
A
SER
9
1
Y
1
A
GLY
394
A
GLY
10
1
Y
1
A
VAL
395
A
VAL
11
1
Y
1
A
ASP
396
A
ASP
12
1
Y
1
A
LEU
397
A
LEU
13
1
Y
1
A
GLY
398
A
GLY
14
1
Y
1
A
THR
399
A
THR
15
1
Y
1
A
GLU
400
A
GLU
16
1
Y
1
A
ASN
401
A
ASN
17
1
Y
1
B
MET
385
B
MET
1
1
Y
1
B
HIS
386
B
HIS
2
1
Y
1
B
HIS
387
B
HIS
3
1
Y
1
B
HIS
388
B
HIS
4
1
Y
1
B
HIS
389
B
HIS
5
1
Y
1
B
HIS
390
B
HIS
6
1
Y
1
B
HIS
391
B
HIS
7
1
Y
1
B
SER
392
B
SER
8
1
Y
1
B
SER
393
B
SER
9
1
Y
1
B
GLY
394
B
GLY
10
1
Y
1
B
VAL
395
B
VAL
11
1
Y
1
B
ASP
396
B
ASP
12
1
Y
1
B
LEU
397
B
LEU
13
1
Y
1
B
GLY
398
B
GLY
14
1
Y
1
B
THR
399
B
THR
15
1
Y
1
B
GLU
400
B
GLU
16
1
Y
1
A
A
OH
O
TYR
HOH
403
91
2.18
1
A
GLU
498
75.10
-128.62
1
B
ARG
433
54.37
-125.44
17.652
0.56
0.00
0.00
-0.88
0.00
0.32
0.960
0.944
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.20529
0.175
0.17657
0.17657
1.75
33.71
1144
21214
21214
5.1
99.92
4.124
0.067
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.105
0.102
0.80
0.80
1.20
PDB entries 2AWW, 2BYG, 2AWX, 2AWU, 2G2L
MAXIMUM LIKELIHOOD
MASK
1.75
33.71
124
1646
9
0
1513
0.012
0.022
1546
0.002
0.020
1029
1.404
1.986
2088
1.913
3.000
2542
5.877
5.000
201
40.772
24.364
55
11.648
15.000
279
9.689
15.000
9
0.088
0.200
253
0.005
0.020
1694
0.001
0.020
277
0.188
0.200
240
0.196
0.200
1036
0.166
0.200
730
0.088
0.200
857
0.148
0.200
94
0.207
0.200
10
0.315
0.200
52
0.169
0.200
14
3.711
5.000
1001
1.566
5.000
418
5.194
7.000
1618
7.164
9.000
559
10.020
11.000
470
1
A
1
592
X-RAY DIFFRACTION
medium positional
0.70
0.50
2
B
1
633
X-RAY DIFFRACTION
loose positional
1.15
5.00
1
A
1
592
X-RAY DIFFRACTION
medium thermal
2.97
2.00
2
B
1
633
X-RAY DIFFRACTION
loose thermal
3.44
10.00
0.33
0.224
1.795
67
1529
20
99.94
20.4
1.75
33.71
3B76
22359
22359
0
0
0.094
0.094
1
16.0
7.2
100
0.844
1.75
1.84
2.9
23287
0.844
1
7.3
100
refinement
REFMAC
5.3.0040
data collection
MAR345
CCD
data reduction
MOSFLM
data scaling
SCALA
phasing
PHASER
Crystal structure of the third PDZ domain of human ligand-of-numb protein-X (LNX1) in complex with the C-terminal peptide from the coxsackievirus and adenovirus receptor
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
GLY
448
A
GLY
64
HELX_P
A
GLY
454
A
GLY
70
1
1
7
A
THR
471
A
THR
87
HELX_P
A
VAL
473
A
VAL
89
5
2
3
A
SER
474
A
SER
90
HELX_P
A
ARG
484
A
ARG
100
1
3
11
B
GLY
448
B
GLY
64
HELX_P
B
GLY
454
B
GLY
70
1
4
7
B
THR
471
B
THR
87
HELX_P
B
VAL
473
B
VAL
89
5
5
3
B
SER
474
B
SER
90
HELX_P
B
ARG
484
B
ARG
100
1
6
11
metalc
2.758
A
HOH
115
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
metalc
2.791
A
HOH
136
F
O
HOH
1_555
A
NA
601
C
NA
NA
1_555
metalc
2.817
A
ALA
430
A
O
ALA
46
1_555
A
NA
601
C
NA
NA
1_555
metalc
2.587
A
HIS
432
A
O
HIS
48
1_555
A
NA
601
C
NA
NA
1_555
metalc
2.663
A
TRP
435
A
O
TRP
51
1_555
A
NA
601
C
NA
NA
1_555
metalc
2.742
A
ASP
436
A
OD1
ASP
52
1_555
A
NA
601
C
NA
NA
1_555
LIGASE
PDZ, bound ligand, Structural Genomics, Structural Genomics Consortium, SGC, Ligase, Metal-binding, Ubl conjugation pathway, Zinc-finger, UNKNOWN FUNCTION
A
B
A
LEU
402
A
LEU
18
A
VAL
502
A
VAL
118
5
B
LEU
402
B
LEU
18
B
VAL
502
B
VAL
118
5
LNX1_HUMAN
UNP
1
504
Q8TBB1
HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSS
SIVLKALEVKE
504
594
3B76
408
498
Q8TBB1
A
1
24
114
504
594
3B76
408
498
Q8TBB1
B
1
24
114
1
expression tag
MET
385
3B76
A
Q8TBB1
UNP
1
1
expression tag
HIS
386
3B76
A
Q8TBB1
UNP
2
1
expression tag
HIS
387
3B76
A
Q8TBB1
UNP
3
1
expression tag
HIS
388
3B76
A
Q8TBB1
UNP
4
1
expression tag
HIS
389
3B76
A
Q8TBB1
UNP
5
1
expression tag
HIS
390
3B76
A
Q8TBB1
UNP
6
1
expression tag
HIS
391
3B76
A
Q8TBB1
UNP
7
1
expression tag
SER
392
3B76
A
Q8TBB1
UNP
8
1
expression tag
SER
393
3B76
A
Q8TBB1
UNP
9
1
expression tag
GLY
394
3B76
A
Q8TBB1
UNP
10
1
expression tag
VAL
395
3B76
A
Q8TBB1
UNP
11
1
expression tag
ASP
396
3B76
A
Q8TBB1
UNP
12
1
expression tag
LEU
397
3B76
A
Q8TBB1
UNP
13
1
expression tag
GLY
398
3B76
A
Q8TBB1
UNP
14
1
expression tag
THR
399
3B76
A
Q8TBB1
UNP
15
1
expression tag
GLU
400
3B76
A
Q8TBB1
UNP
16
1
expression tag
ASN
401
3B76
A
Q8TBB1
UNP
17
1
expression tag
LEU
402
3B76
A
Q8TBB1
UNP
18
1
expression tag
TYR
403
3B76
A
Q8TBB1
UNP
19
1
expression tag
PHE
404
3B76
A
Q8TBB1
UNP
20
1
expression tag
GLN
405
3B76
A
Q8TBB1
UNP
21
1
expression tag
SER
406
3B76
A
Q8TBB1
UNP
22
1
expression tag
MET
407
3B76
A
Q8TBB1
UNP
23
1
SEE REMARK 999
GLY
499
3B76
A
Q8TBB1
UNP
115
1
SEE REMARK 999
SER
500
3B76
A
Q8TBB1
UNP
116
1
SEE REMARK 999
ILE
501
3B76
A
Q8TBB1
UNP
117
1
SEE REMARK 999
VAL
502
3B76
A
Q8TBB1
UNP
118
2
expression tag
MET
385
3B76
B
Q8TBB1
UNP
1
2
expression tag
HIS
386
3B76
B
Q8TBB1
UNP
2
2
expression tag
HIS
387
3B76
B
Q8TBB1
UNP
3
2
expression tag
HIS
388
3B76
B
Q8TBB1
UNP
4
2
expression tag
HIS
389
3B76
B
Q8TBB1
UNP
5
2
expression tag
HIS
390
3B76
B
Q8TBB1
UNP
6
2
expression tag
HIS
391
3B76
B
Q8TBB1
UNP
7
2
expression tag
SER
392
3B76
B
Q8TBB1
UNP
8
2
expression tag
SER
393
3B76
B
Q8TBB1
UNP
9
2
expression tag
GLY
394
3B76
B
Q8TBB1
UNP
10
2
expression tag
VAL
395
3B76
B
Q8TBB1
UNP
11
2
expression tag
ASP
396
3B76
B
Q8TBB1
UNP
12
2
expression tag
LEU
397
3B76
B
Q8TBB1
UNP
13
2
expression tag
GLY
398
3B76
B
Q8TBB1
UNP
14
2
expression tag
THR
399
3B76
B
Q8TBB1
UNP
15
2
expression tag
GLU
400
3B76
B
Q8TBB1
UNP
16
2
expression tag
ASN
401
3B76
B
Q8TBB1
UNP
17
2
expression tag
LEU
402
3B76
B
Q8TBB1
UNP
18
2
expression tag
TYR
403
3B76
B
Q8TBB1
UNP
19
2
expression tag
PHE
404
3B76
B
Q8TBB1
UNP
20
2
expression tag
GLN
405
3B76
B
Q8TBB1
UNP
21
2
expression tag
SER
406
3B76
B
Q8TBB1
UNP
22
2
expression tag
MET
407
3B76
B
Q8TBB1
UNP
23
2
SEE REMARK 999
GLY
499
3B76
B
Q8TBB1
UNP
115
2
SEE REMARK 999
SER
500
3B76
B
Q8TBB1
UNP
116
2
SEE REMARK 999
ILE
501
3B76
B
Q8TBB1
UNP
117
2
SEE REMARK 999
VAL
502
3B76
B
Q8TBB1
UNP
118
4
6
3
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
405
A
GLN
21
A
GLN
415
A
GLN
31
A
SER
488
A
SER
104
A
GLU
498
A
GLU
114
A
ILE
461
A
ILE
77
A
VAL
465
A
VAL
81
A
VAL
468
A
VAL
84
A
GLU
469
A
GLU
85
A
GLN
405
A
GLN
21
A
GLN
415
A
GLN
31
A
SER
488
A
SER
104
A
GLU
498
A
GLU
114
A
ILE
461
A
ILE
77
A
VAL
465
A
VAL
81
A
ILE
439
A
ILE
55
A
VAL
444
A
VAL
60
A
MET
424
A
MET
40
A
GLY
428
A
GLY
44
B
SER
500
B
SER
116
B
VAL
502
B
VAL
118
A
SER
500
A
SER
116
A
VAL
502
A
VAL
118
B
MET
424
B
MET
40
B
ALA
427
B
ALA
43
B
TYR
440
B
TYR
56
B
VAL
444
B
VAL
60
B
SER
406
B
SER
22
B
GLN
415
B
GLN
31
B
SER
488
B
SER
104
B
GLU
498
B
GLU
114
B
ILE
461
B
ILE
77
B
VAL
465
B
VAL
81
B
VAL
468
B
VAL
84
B
GLU
469
B
GLU
85
B
ALA
430
B
ALA
46
B
HIS
432
B
HIS
48
B
TRP
435
B
TRP
51
B
LEU
437
B
LEU
53
BINDING SITE FOR RESIDUE NA A 601
A
NA
601
Software
6
BINDING SITE FOR RESIDUE EDO B 601
B
EDO
601
Software
6
BINDING SITE FOR RESIDUE EDO B 602
B
EDO
602
Software
4
A
HOH
115
F
HOH
6
1_555
A
HOH
136
F
HOH
6
1_555
A
ALA
430
A
ALA
46
6
1_555
A
HIS
432
A
HIS
48
6
1_555
A
TRP
435
A
TRP
51
6
1_555
A
ASP
436
A
ASP
52
6
1_555
B
HOH
33
G
HOH
6
1_555
B
HOH
140
G
HOH
6
1_555
B
PRO
438
B
PRO
54
6
1_555
B
ILE
439
B
ILE
55
6
1_555
B
LEU
462
B
LEU
78
6
1_555
B
THR
471
B
THR
87
6
1_555
A
HOH
25
F
HOH
4
2_455
A
LYS
497
A
LYS
113
4
4_456
B
SER
486
B
SER
102
4
1_555
B
SER
487
B
SER
103
4
1_555
19
P 21 21 21