0.021329
0.000000
0.000000
0.000000
0.010410
0.000000
0.000000
0.000000
0.007870
0.00000
0.00000
0.00000
Szczepanowski, R.H.
Carpenter, M.
Czapinska, H.
Tamulaitis, G.
Siksnys, V.
Bhagwat, A.
Bochtler, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
46.884
96.060
127.069
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H8 O7
192.124
CITRIC ACID
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
A direct crystallographic demonstration that Type II restriction endonuclease PspGI flips nucleotides
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
35
4792
4799
10.1093/nar/gkm513
17617640
Nucleotide flipping by restriction enzymes analyzed by 2-aminopurine steady-state fluorescence.
2007
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
34
3762
3770
10.1093/nar/gkl545
16893959
Sequence-dependent enhancement of hydrolytic deamination of cytosines in DNA by the restriction enzyme PspGI.
2006
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
329
913
929
10.1016/S0022-2836(03)00523-0
12798682
PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes.
2003
US
Appl.Environ.Microbiol.
AEMIDF
2106
0099-2240
64
3669
3673
9758783
Characterization of an extremely thermostable restriction enzyme, PspGI, from a Pyrococcus strain and cloning of the PspGI restriction-modification system in Escherichia coli.
1998
10.2210/pdb3bm3/pdb
pdb_00003bm3
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
BENT MIRROR
CCD
2007-08-16
MARRESEARCH
TRIANGULAR MONOCHROMATOR
SINGLE WAVELENGTH
M
x-ray
1
0.976
1.0
BW6
MPG/DESY, HAMBURG
0.976
SYNCHROTRON
MPG/DESY, HAMBURG BEAMLINE BW6
3318.187
DNA (5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3')
1
syn
polymer
3389.221
DNA (5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3')
1
syn
polymer
32215.279
PspGI restriction endonuclease
D138A, A146T
2
man
polymer
192.124
CITRIC ACID
1
syn
non-polymer
18.015
water
293
nat
water
no
no
(DC)(DA)(DT)(DC)(DC)(DA)(DG)(DG)(DT)(DA)(DC)
CATCCAGGTAC
C
polydeoxyribonucleotide
no
no
(DG)(DG)(DT)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DT)
GGTACCTGGAT
D
polydeoxyribonucleotide
no
yes
(MSE)VRNLVIDITKKPTQNIPPTNEIIEEAITELNVDELLDRLFEKDESGEVITPSRIAK(MSE)LEEKAFEIYKEYEK
QVREAYLSAGYSREKLEQSFQQARFSRGGKAFEIIFTKLLNKFGIRYEHDRVIKIYDYITEGEKPAFIIPSVRTFLNDPS
SAILITVKRKVRERWREAVGEAQILRNKFGDEINFWFVGFDEEFTIYSAIA(MSE)LDNGIDRVYVIDGRYDSLIEEIKR
ISDPNFNEDKYIQKIRRFSDIFDDIIQFLNKHGNKKRGKQLTLV
MVRNLVIDITKKPTQNIPPTNEIIEEAITELNVDELLDRLFEKDESGEVITPSRIAKMLEEKAFEIYKEYEKQVREAYLS
AGYSREKLEQSFQQARFSRGGKAFEIIFTKLLNKFGIRYEHDRVIKIYDYITEGEKPAFIIPSVRTFLNDPSSAILITVK
RKVRERWREAVGEAQILRNKFGDEINFWFVGFDEEFTIYSAIAMLDNGIDRVYVIDGRYDSLIEEIKRISDPNFNEDKYI
QKIRRFSDIFDDIIQFLNKHGNKKRGKQLTLV
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
83521
Pyrococcus sp. GI-H
562
Escherichia coli
B834
PLASMID
pET21a
1
2.01
38.84
VAPOR DIFFUSION, SITTING DROP
4.0
20% MPD, 0.1 M citric acid, 0.1 M cobalt (II) chloride as an additive, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K
294
MPD
1
citric acid
1
cobalt (II) chloride
1
MPD
2
citric acid
2
cobalt (II) chloride
2
-12.162
1
20
C
-4
D
4
2.027
C_DA-4:DT4_D
1
-14.635
0.019
-0.091
-0.242
-11.061
1
20
C
-3
D
3
-0.070
C_DT-3:DA3_D
2
-12.965
-0.103
0.238
-0.230
-18.542
1
19
C
-2
D
2
-1.316
C_DC-2:DG2_D
3
-12.909
0.209
0.285
-0.145
-4.107
1
19
C
-1
D
1
-0.385
C_DC-1:DG1_D
4
22.620
0.261
-0.053
-0.265
4.825
1
19
C
1
D
-1
-0.292
C_DG1:DC-1_D
5
23.196
-0.258
0.016
-0.283
17.446
1
19
C
2
D
-2
-1.169
C_DG2:DC-2_D
6
-13.850
-0.291
0.333
-0.187
8.976
1
20
C
3
D
-3
-0.829
C_DT3:DA-3_D
7
-12.742
-0.064
0.097
-0.241
14.288
1
20
C
4
D
-4
-1.578
C_DA4:DT-4_D
8
-4.285
0.411
0.088
-0.083
23.971
1
19
C
5
D
-5
-5.707
C_DC5:DG-5_D
9
-1.169
-0.020
-0.666
0.226
3.348
34.290
C
C
-4
-3
-5.538
D
D
4
3
3.290
-3.255
-0.603
-0.312
CC_DA-4DT-3:DA3DT4_DD
1
-3.395
5.776
33.975
-0.007
0.480
3.334
44.141
C
C
-3
-2
-10.526
D
D
3
2
3.421
-7.871
-0.162
0.235
CC_DT-3DC-2:DG2DA3_DD
2
-0.931
1.245
43.458
1.081
0.124
3.457
29.221
C
C
-2
-1
24.163
D
D
2
1
3.285
11.840
1.690
0.805
CC_DC-2DC-1:DG1DG2_DD
3
2.358
-4.812
26.660
-1.181
-2.797
5.338
34.141
C
C
-1
1
9.198
D
D
1
-1
4.885
5.379
0.046
3.338
CC_DC-1DG1:DC-1DG1_DD
4
-0.203
0.346
33.727
4.345
-0.129
3.518
29.480
C
C
1
2
23.633
D
D
-1
-2
3.376
11.694
-1.572
0.751
CC_DG1DG2:DC-2DC-1_DD
5
-2.464
4.979
26.998
-1.275
2.509
3.505
41.663
C
C
2
3
-10.467
D
D
-2
-3
3.515
-7.406
0.359
-0.174
CC_DG2DT3:DA-3DC-2_DD
6
1.768
-2.499
40.992
0.602
-0.302
3.357
39.550
C
C
3
4
-0.855
D
D
-3
-4
3.346
-0.578
0.481
0.654
CC_DT3DA4:DT-4DA-3_DD
7
2.177
-3.218
39.488
1.037
-0.450
3.180
31.544
C
C
4
5
7.959
D
D
-4
-5
3.195
4.281
0.060
0.548
CC_DA4DC5:DG-5DT-4_DD
8
6.819
-12.677
30.524
0.219
1.147
pdbx_unobs_or_zero_occ_atoms
software
database_2
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Advisory
Refinement description
Version format compliance
Advisory
Refinement description
Advisory
Database references
Derived calculations
1
0
2008-09-16
1
1
2011-07-13
1
2
2017-10-25
1
3
2021-10-20
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2007-12-12
REL
REL
CIT
CITRIC ACID
HOH
water
CIT
1
4
CIT
CIT
273
B
HOH
1
5
HOH
HOH
6
C
HOH
5
5
HOH
HOH
7
C
HOH
8
5
HOH
HOH
8
C
HOH
22
5
HOH
HOH
9
C
HOH
32
5
HOH
HOH
10
C
HOH
35
5
HOH
HOH
11
C
HOH
44
5
HOH
HOH
12
C
HOH
50
5
HOH
HOH
13
C
HOH
51
5
HOH
HOH
14
C
HOH
61
5
HOH
HOH
15
C
HOH
64
5
HOH
HOH
16
C
HOH
76
5
HOH
HOH
17
C
HOH
84
5
HOH
HOH
18
C
HOH
90
5
HOH
HOH
19
C
HOH
118
5
HOH
HOH
20
C
HOH
127
5
HOH
HOH
21
C
HOH
131
5
HOH
HOH
22
C
HOH
135
5
HOH
HOH
23
C
HOH
144
5
HOH
HOH
24
C
HOH
175
5
HOH
HOH
25
C
HOH
178
5
HOH
HOH
26
C
HOH
229
5
HOH
HOH
27
C
HOH
251
5
HOH
HOH
28
C
HOH
268
5
HOH
HOH
29
C
HOH
273
5
HOH
HOH
30
C
HOH
288
5
HOH
HOH
31
C
HOH
290
5
HOH
HOH
32
C
HOH
296
5
HOH
HOH
33
C
HOH
2
5
HOH
HOH
5
D
HOH
3
5
HOH
HOH
6
D
HOH
20
5
HOH
HOH
7
D
HOH
23
5
HOH
HOH
8
D
HOH
31
5
HOH
HOH
9
D
HOH
33
5
HOH
HOH
10
D
HOH
43
5
HOH
HOH
11
D
HOH
54
5
HOH
HOH
12
D
HOH
67
5
HOH
HOH
13
D
HOH
75
5
HOH
HOH
14
D
HOH
82
5
HOH
HOH
15
D
HOH
97
5
HOH
HOH
16
D
HOH
100
5
HOH
HOH
17
D
HOH
116
5
HOH
HOH
18
D
HOH
124
5
HOH
HOH
19
D
HOH
165
5
HOH
HOH
20
D
HOH
185
5
HOH
HOH
21
D
HOH
193
5
HOH
HOH
22
D
HOH
199
5
HOH
HOH
23
D
HOH
203
5
HOH
HOH
24
D
HOH
208
5
HOH
HOH
25
D
HOH
213
5
HOH
HOH
26
D
HOH
240
5
HOH
HOH
27
D
HOH
243
5
HOH
HOH
28
D
HOH
265
5
HOH
HOH
29
D
HOH
279
5
HOH
HOH
30
D
HOH
295
5
HOH
HOH
31
D
HOH
299
5
HOH
HOH
32
D
HOH
325
5
HOH
HOH
33
D
HOH
9
5
HOH
HOH
273
A
HOH
10
5
HOH
HOH
274
A
HOH
12
5
HOH
HOH
275
A
HOH
14
5
HOH
HOH
276
A
HOH
16
5
HOH
HOH
277
A
HOH
19
5
HOH
HOH
278
A
HOH
24
5
HOH
HOH
279
A
HOH
25
5
HOH
HOH
280
A
HOH
26
5
HOH
HOH
281
A
HOH
28
5
HOH
HOH
282
A
HOH
41
5
HOH
HOH
283
A
HOH
46
5
HOH
HOH
284
A
HOH
48
5
HOH
HOH
285
A
HOH
49
5
HOH
HOH
286
A
HOH
52
5
HOH
HOH
287
A
HOH
56
5
HOH
HOH
288
A
HOH
58
5
HOH
HOH
289
A
HOH
59
5
HOH
HOH
290
A
HOH
65
5
HOH
HOH
291
A
HOH
66
5
HOH
HOH
292
A
HOH
68
5
HOH
HOH
293
A
HOH
69
5
HOH
HOH
294
A
HOH
71
5
HOH
HOH
295
A
HOH
72
5
HOH
HOH
296
A
HOH
73
5
HOH
HOH
297
A
HOH
77
5
HOH
HOH
298
A
HOH
80
5
HOH
HOH
299
A
HOH
81
5
HOH
HOH
300
A
HOH
88
5
HOH
HOH
301
A
HOH
89
5
HOH
HOH
302
A
HOH
91
5
HOH
HOH
303
A
HOH
92
5
HOH
HOH
304
A
HOH
94
5
HOH
HOH
305
A
HOH
95
5
HOH
HOH
306
A
HOH
98
5
HOH
HOH
307
A
HOH
99
5
HOH
HOH
308
A
HOH
101
5
HOH
HOH
309
A
HOH
102
5
HOH
HOH
310
A
HOH
104
5
HOH
HOH
311
A
HOH
106
5
HOH
HOH
312
A
HOH
107
5
HOH
HOH
313
A
HOH
108
5
HOH
HOH
314
A
HOH
110
5
HOH
HOH
315
A
HOH
111
5
HOH
HOH
316
A
HOH
112
5
HOH
HOH
317
A
HOH
114
5
HOH
HOH
318
A
HOH
120
5
HOH
HOH
319
A
HOH
125
5
HOH
HOH
320
A
HOH
126
5
HOH
HOH
321
A
HOH
128
5
HOH
HOH
322
A
HOH
129
5
HOH
HOH
323
A
HOH
130
5
HOH
HOH
324
A
HOH
132
5
HOH
HOH
325
A
HOH
138
5
HOH
HOH
326
A
HOH
139
5
HOH
HOH
327
A
HOH
140
5
HOH
HOH
328
A
HOH
143
5
HOH
HOH
329
A
HOH
149
5
HOH
HOH
330
A
HOH
150
5
HOH
HOH
331
A
HOH
151
5
HOH
HOH
332
A
HOH
152
5
HOH
HOH
333
A
HOH
153
5
HOH
HOH
334
A
HOH
154
5
HOH
HOH
335
A
HOH
155
5
HOH
HOH
336
A
HOH
156
5
HOH
HOH
337
A
HOH
157
5
HOH
HOH
338
A
HOH
159
5
HOH
HOH
339
A
HOH
160
5
HOH
HOH
340
A
HOH
161
5
HOH
HOH
341
A
HOH
168
5
HOH
HOH
342
A
HOH
172
5
HOH
HOH
343
A
HOH
174
5
HOH
HOH
344
A
HOH
177
5
HOH
HOH
345
A
HOH
181
5
HOH
HOH
346
A
HOH
186
5
HOH
HOH
347
A
HOH
187
5
HOH
HOH
348
A
HOH
194
5
HOH
HOH
349
A
HOH
195
5
HOH
HOH
350
A
HOH
197
5
HOH
HOH
351
A
HOH
198
5
HOH
HOH
352
A
HOH
201
5
HOH
HOH
353
A
HOH
202
5
HOH
HOH
354
A
HOH
207
5
HOH
HOH
355
A
HOH
209
5
HOH
HOH
356
A
HOH
212
5
HOH
HOH
357
A
HOH
214
5
HOH
HOH
358
A
HOH
218
5
HOH
HOH
359
A
HOH
225
5
HOH
HOH
360
A
HOH
227
5
HOH
HOH
361
A
HOH
232
5
HOH
HOH
362
A
HOH
235
5
HOH
HOH
363
A
HOH
237
5
HOH
HOH
364
A
HOH
241
5
HOH
HOH
365
A
HOH
244
5
HOH
HOH
366
A
HOH
245
5
HOH
HOH
367
A
HOH
246
5
HOH
HOH
368
A
HOH
254
5
HOH
HOH
369
A
HOH
255
5
HOH
HOH
370
A
HOH
258
5
HOH
HOH
371
A
HOH
259
5
HOH
HOH
372
A
HOH
260
5
HOH
HOH
373
A
HOH
262
5
HOH
HOH
374
A
HOH
263
5
HOH
HOH
375
A
HOH
270
5
HOH
HOH
376
A
HOH
275
5
HOH
HOH
377
A
HOH
276
5
HOH
HOH
378
A
HOH
277
5
HOH
HOH
379
A
HOH
278
5
HOH
HOH
380
A
HOH
281
5
HOH
HOH
381
A
HOH
283
5
HOH
HOH
382
A
HOH
287
5
HOH
HOH
383
A
HOH
289
5
HOH
HOH
384
A
HOH
291
5
HOH
HOH
385
A
HOH
292
5
HOH
HOH
386
A
HOH
293
5
HOH
HOH
387
A
HOH
297
5
HOH
HOH
388
A
HOH
300
5
HOH
HOH
389
A
HOH
301
5
HOH
HOH
390
A
HOH
303
5
HOH
HOH
391
A
HOH
307
5
HOH
HOH
392
A
HOH
310
5
HOH
HOH
393
A
HOH
320
5
HOH
HOH
394
A
HOH
4
5
HOH
HOH
274
B
HOH
6
5
HOH
HOH
275
B
HOH
7
5
HOH
HOH
276
B
HOH
11
5
HOH
HOH
277
B
HOH
13
5
HOH
HOH
278
B
HOH
15
5
HOH
HOH
279
B
HOH
17
5
HOH
HOH
280
B
HOH
18
5
HOH
HOH
281
B
HOH
21
5
HOH
HOH
282
B
HOH
27
5
HOH
HOH
283
B
HOH
29
5
HOH
HOH
284
B
HOH
30
5
HOH
HOH
285
B
HOH
34
5
HOH
HOH
286
B
HOH
36
5
HOH
HOH
287
B
HOH
37
5
HOH
HOH
288
B
HOH
39
5
HOH
HOH
289
B
HOH
40
5
HOH
HOH
290
B
HOH
42
5
HOH
HOH
291
B
HOH
45
5
HOH
HOH
292
B
HOH
55
5
HOH
HOH
293
B
HOH
57
5
HOH
HOH
294
B
HOH
60
5
HOH
HOH
295
B
HOH
62
5
HOH
HOH
296
B
HOH
63
5
HOH
HOH
297
B
HOH
70
5
HOH
HOH
298
B
HOH
74
5
HOH
HOH
299
B
HOH
78
5
HOH
HOH
300
B
HOH
83
5
HOH
HOH
301
B
HOH
85
5
HOH
HOH
302
B
HOH
86
5
HOH
HOH
303
B
HOH
87
5
HOH
HOH
304
B
HOH
93
5
HOH
HOH
305
B
HOH
96
5
HOH
HOH
306
B
HOH
103
5
HOH
HOH
307
B
HOH
105
5
HOH
HOH
308
B
HOH
109
5
HOH
HOH
309
B
HOH
113
5
HOH
HOH
310
B
HOH
115
5
HOH
HOH
311
B
HOH
117
5
HOH
HOH
312
B
HOH
119
5
HOH
HOH
313
B
HOH
121
5
HOH
HOH
314
B
HOH
122
5
HOH
HOH
315
B
HOH
123
5
HOH
HOH
316
B
HOH
133
5
HOH
HOH
317
B
HOH
134
5
HOH
HOH
318
B
HOH
136
5
HOH
HOH
319
B
HOH
137
5
HOH
HOH
320
B
HOH
141
5
HOH
HOH
321
B
HOH
142
5
HOH
HOH
322
B
HOH
145
5
HOH
HOH
323
B
HOH
146
5
HOH
HOH
324
B
HOH
147
5
HOH
HOH
325
B
HOH
148
5
HOH
HOH
326
B
HOH
158
5
HOH
HOH
327
B
HOH
162
5
HOH
HOH
328
B
HOH
163
5
HOH
HOH
329
B
HOH
164
5
HOH
HOH
330
B
HOH
169
5
HOH
HOH
331
B
HOH
170
5
HOH
HOH
332
B
HOH
173
5
HOH
HOH
333
B
HOH
179
5
HOH
HOH
334
B
HOH
180
5
HOH
HOH
335
B
HOH
182
5
HOH
HOH
336
B
HOH
183
5
HOH
HOH
337
B
HOH
188
5
HOH
HOH
338
B
HOH
189
5
HOH
HOH
339
B
HOH
190
5
HOH
HOH
340
B
HOH
191
5
HOH
HOH
341
B
HOH
192
5
HOH
HOH
342
B
HOH
196
5
HOH
HOH
343
B
HOH
200
5
HOH
HOH
344
B
HOH
204
5
HOH
HOH
345
B
HOH
205
5
HOH
HOH
346
B
HOH
211
5
HOH
HOH
347
B
HOH
215
5
HOH
HOH
348
B
HOH
217
5
HOH
HOH
349
B
HOH
219
5
HOH
HOH
350
B
HOH
220
5
HOH
HOH
351
B
HOH
221
5
HOH
HOH
352
B
HOH
222
5
HOH
HOH
353
B
HOH
223
5
HOH
HOH
354
B
HOH
224
5
HOH
HOH
355
B
HOH
228
5
HOH
HOH
356
B
HOH
230
5
HOH
HOH
357
B
HOH
231
5
HOH
HOH
358
B
HOH
236
5
HOH
HOH
359
B
HOH
238
5
HOH
HOH
360
B
HOH
239
5
HOH
HOH
361
B
HOH
247
5
HOH
HOH
362
B
HOH
248
5
HOH
HOH
363
B
HOH
250
5
HOH
HOH
364
B
HOH
252
5
HOH
HOH
365
B
HOH
253
5
HOH
HOH
366
B
HOH
256
5
HOH
HOH
367
B
HOH
257
5
HOH
HOH
368
B
HOH
261
5
HOH
HOH
369
B
HOH
264
5
HOH
HOH
370
B
HOH
267
5
HOH
HOH
371
B
HOH
269
5
HOH
HOH
372
B
HOH
271
5
HOH
HOH
373
B
HOH
272
5
HOH
HOH
374
B
HOH
274
5
HOH
HOH
375
B
HOH
282
5
HOH
HOH
376
B
HOH
286
5
HOH
HOH
377
B
HOH
298
5
HOH
HOH
378
B
HOH
302
5
HOH
HOH
379
B
HOH
309
5
HOH
HOH
380
B
HOH
312
5
HOH
HOH
381
B
HOH
314
5
HOH
HOH
382
B
HOH
315
5
HOH
HOH
383
B
HOH
316
5
HOH
HOH
384
B
HOH
318
5
HOH
HOH
385
B
HOH
319
5
HOH
HOH
386
B
HOH
327
5
HOH
HOH
387
B
C
-5
n
1
DC
-5
C
A
-4
n
2
DA
-4
C
T
-3
n
3
DT
-3
C
C
-2
n
4
DC
-2
C
C
-1
n
5
DC
-1
C
A
0
n
6
DA
0
C
G
1
n
7
DG
1
C
G
2
n
8
DG
2
C
T
3
n
9
DT
3
C
A
4
n
10
DA
4
C
C
5
n
11
DC
5
C
G
-6
n
1
DG
-6
D
G
-5
n
2
DG
-5
D
T
-4
n
3
DT
-4
D
A
-3
n
4
DA
-3
D
C
-2
n
5
DC
-2
D
C
-1
n
6
DC
-1
D
T
0
n
7
DT
0
D
G
1
n
8
DG
1
D
G
2
n
9
DG
2
D
A
3
n
10
DA
3
D
T
4
n
11
DT
4
D
n
1
1
A
VAL
2
n
2
VAL
2
A
ARG
3
n
3
ARG
3
A
ASN
4
n
4
ASN
4
A
LEU
5
n
5
LEU
5
A
VAL
6
n
6
VAL
6
A
ILE
7
n
7
ILE
7
A
ASP
8
n
8
ASP
8
A
ILE
9
n
9
ILE
9
A
THR
10
n
10
THR
10
A
LYS
11
n
11
LYS
11
A
LYS
12
n
12
LYS
12
A
PRO
13
n
13
PRO
13
A
THR
14
n
14
THR
14
A
GLN
15
n
15
GLN
15
A
ASN
16
n
16
ASN
16
A
ILE
17
n
17
ILE
17
A
PRO
18
n
18
PRO
18
A
PRO
19
n
19
PRO
19
A
THR
20
n
20
THR
20
A
ASN
21
n
21
ASN
21
A
GLU
22
n
22
GLU
22
A
ILE
23
n
23
ILE
23
A
ILE
24
n
24
ILE
24
A
GLU
25
n
25
GLU
25
A
GLU
26
n
26
GLU
26
A
ALA
27
n
27
ALA
27
A
ILE
28
n
28
ILE
28
A
THR
29
n
29
THR
29
A
GLU
30
n
30
GLU
30
A
LEU
31
n
31
LEU
31
A
ASN
32
n
32
ASN
32
A
VAL
33
n
33
VAL
33
A
ASP
34
n
34
ASP
34
A
GLU
35
n
35
GLU
35
A
LEU
36
n
36
LEU
36
A
LEU
37
n
37
LEU
37
A
ASP
38
n
38
ASP
38
A
ARG
39
n
39
ARG
39
A
LEU
40
n
40
LEU
40
A
PHE
41
n
41
PHE
41
A
GLU
42
n
42
GLU
42
A
LYS
43
n
43
LYS
43
A
ASP
44
n
44
ASP
44
A
GLU
45
n
45
GLU
45
A
SER
46
n
46
SER
46
A
GLY
47
n
47
GLY
47
A
GLU
48
n
48
GLU
48
A
VAL
49
n
49
VAL
49
A
ILE
50
n
50
ILE
50
A
THR
51
n
51
THR
51
A
PRO
52
n
52
PRO
52
A
SER
53
n
53
SER
53
A
ARG
54
n
54
ARG
54
A
ILE
55
n
55
ILE
55
A
ALA
56
n
56
ALA
56
A
LYS
57
n
57
LYS
57
A
MSE
58
n
58
MSE
58
A
LEU
59
n
59
LEU
59
A
GLU
60
n
60
GLU
60
A
GLU
61
n
61
GLU
61
A
LYS
62
n
62
LYS
62
A
ALA
63
n
63
ALA
63
A
PHE
64
n
64
PHE
64
A
GLU
65
n
65
GLU
65
A
ILE
66
n
66
ILE
66
A
TYR
67
n
67
TYR
67
A
LYS
68
n
68
LYS
68
A
GLU
69
n
69
GLU
69
A
TYR
70
n
70
TYR
70
A
GLU
71
n
71
GLU
71
A
LYS
72
n
72
LYS
72
A
GLN
73
n
73
GLN
73
A
VAL
74
n
74
VAL
74
A
ARG
75
n
75
ARG
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
TYR
78
n
78
TYR
78
A
LEU
79
n
79
LEU
79
A
SER
80
n
80
SER
80
A
ALA
81
n
81
ALA
81
A
GLY
82
n
82
GLY
82
A
TYR
83
n
83
TYR
83
A
SER
84
n
84
SER
84
A
ARG
85
n
85
ARG
85
A
GLU
86
n
86
GLU
86
A
LYS
87
n
87
LYS
87
A
LEU
88
n
88
LEU
88
A
GLU
89
n
89
GLU
89
A
GLN
90
n
90
GLN
90
A
SER
91
n
91
SER
91
A
PHE
92
n
92
PHE
92
A
GLN
93
n
93
GLN
93
A
GLN
94
n
94
GLN
94
A
ALA
95
n
95
ALA
95
A
ARG
96
n
96
ARG
96
A
PHE
97
n
97
PHE
97
A
SER
98
n
98
SER
98
A
ARG
99
n
99
ARG
99
A
GLY
100
n
100
GLY
100
A
GLY
101
n
101
GLY
101
A
LYS
102
n
102
LYS
102
A
ALA
103
n
103
ALA
103
A
PHE
104
n
104
PHE
104
A
GLU
105
n
105
GLU
105
A
ILE
106
n
106
ILE
106
A
ILE
107
n
107
ILE
107
A
PHE
108
n
108
PHE
108
A
THR
109
n
109
THR
109
A
LYS
110
n
110
LYS
110
A
LEU
111
n
111
LEU
111
A
LEU
112
n
112
LEU
112
A
ASN
113
n
113
ASN
113
A
LYS
114
n
114
LYS
114
A
PHE
115
n
115
PHE
115
A
GLY
116
n
116
GLY
116
A
ILE
117
n
117
ILE
117
A
ARG
118
n
118
ARG
118
A
TYR
119
n
119
TYR
119
A
GLU
120
n
120
GLU
120
A
HIS
121
n
121
HIS
121
A
ASP
122
n
122
ASP
122
A
ARG
123
n
123
ARG
123
A
VAL
124
n
124
VAL
124
A
ILE
125
n
125
ILE
125
A
LYS
126
n
126
LYS
126
A
ILE
127
n
127
ILE
127
A
TYR
128
n
128
TYR
128
A
ASP
129
n
129
ASP
129
A
TYR
130
n
130
TYR
130
A
ILE
131
n
131
ILE
131
A
THR
132
n
132
THR
132
A
GLU
133
n
133
GLU
133
A
GLY
134
n
134
GLY
134
A
GLU
135
n
135
GLU
135
A
LYS
136
n
136
LYS
136
A
PRO
137
n
137
PRO
137
A
ALA
138
n
138
ALA
138
A
PHE
139
n
139
PHE
139
A
ILE
140
n
140
ILE
140
A
ILE
141
n
141
ILE
141
A
PRO
142
n
142
PRO
142
A
SER
143
n
143
SER
143
A
VAL
144
n
144
VAL
144
A
ARG
145
n
145
ARG
145
A
THR
146
n
146
THR
146
A
PHE
147
n
147
PHE
147
A
LEU
148
n
148
LEU
148
A
ASN
149
n
149
ASN
149
A
ASP
150
n
150
ASP
150
A
PRO
151
n
151
PRO
151
A
SER
152
n
152
SER
152
A
SER
153
n
153
SER
153
A
ALA
154
n
154
ALA
154
A
ILE
155
n
155
ILE
155
A
LEU
156
n
156
LEU
156
A
ILE
157
n
157
ILE
157
A
THR
158
n
158
THR
158
A
VAL
159
n
159
VAL
159
A
LYS
160
n
160
LYS
160
A
ARG
161
n
161
ARG
161
A
LYS
162
n
162
LYS
162
A
VAL
163
n
163
VAL
163
A
ARG
164
n
164
ARG
164
A
GLU
165
n
165
GLU
165
A
ARG
166
n
166
ARG
166
A
TRP
167
n
167
TRP
167
A
ARG
168
n
168
ARG
168
A
GLU
169
n
169
GLU
169
A
ALA
170
n
170
ALA
170
A
VAL
171
n
171
VAL
171
A
GLY
172
n
172
GLY
172
A
GLU
173
n
173
GLU
173
A
ALA
174
n
174
ALA
174
A
GLN
175
n
175
GLN
175
A
ILE
176
n
176
ILE
176
A
LEU
177
n
177
LEU
177
A
ARG
178
n
178
ARG
178
A
ASN
179
n
179
ASN
179
A
LYS
180
n
180
LYS
180
A
PHE
181
n
181
PHE
181
A
GLY
182
n
182
GLY
182
A
ASP
183
n
183
ASP
183
A
GLU
184
n
184
GLU
184
A
ILE
185
n
185
ILE
185
A
ASN
186
n
186
ASN
186
A
PHE
187
n
187
PHE
187
A
TRP
188
n
188
TRP
188
A
PHE
189
n
189
PHE
189
A
VAL
190
n
190
VAL
190
A
GLY
191
n
191
GLY
191
A
PHE
192
n
192
PHE
192
A
ASP
193
n
193
ASP
193
A
GLU
194
n
194
GLU
194
A
GLU
195
n
195
GLU
195
A
PHE
196
n
196
PHE
196
A
THR
197
n
197
THR
197
A
ILE
198
n
198
ILE
198
A
TYR
199
n
199
TYR
199
A
SER
200
n
200
SER
200
A
ALA
201
n
201
ALA
201
A
ILE
202
n
202
ILE
202
A
ALA
203
n
203
ALA
203
A
MSE
204
n
204
MSE
204
A
LEU
205
n
205
LEU
205
A
ASP
206
n
206
ASP
206
A
ASN
207
n
207
ASN
207
A
GLY
208
n
208
GLY
208
A
ILE
209
n
209
ILE
209
A
ASP
210
n
210
ASP
210
A
ARG
211
n
211
ARG
211
A
VAL
212
n
212
VAL
212
A
TYR
213
n
213
TYR
213
A
VAL
214
n
214
VAL
214
A
ILE
215
n
215
ILE
215
A
ASP
216
n
216
ASP
216
A
GLY
217
n
217
GLY
217
A
ARG
218
n
218
ARG
218
A
TYR
219
n
219
TYR
219
A
ASP
220
n
220
ASP
220
A
SER
221
n
221
SER
221
A
LEU
222
n
222
LEU
222
A
ILE
223
n
223
ILE
223
A
GLU
224
n
224
GLU
224
A
GLU
225
n
225
GLU
225
A
ILE
226
n
226
ILE
226
A
LYS
227
n
227
LYS
227
A
ARG
228
n
228
ARG
228
A
ILE
229
n
229
ILE
229
A
SER
230
n
230
SER
230
A
ASP
231
n
231
ASP
231
A
PRO
232
n
232
PRO
232
A
ASN
233
n
233
ASN
233
A
PHE
234
n
234
PHE
234
A
ASN
235
n
235
ASN
235
A
GLU
236
n
236
GLU
236
A
ASP
237
n
237
ASP
237
A
LYS
238
n
238
LYS
238
A
TYR
239
n
239
TYR
239
A
ILE
240
n
240
ILE
240
A
GLN
241
n
241
GLN
241
A
LYS
242
n
242
LYS
242
A
ILE
243
n
243
ILE
243
A
ARG
244
n
244
ARG
244
A
ARG
245
n
245
ARG
245
A
PHE
246
n
246
PHE
246
A
SER
247
n
247
SER
247
A
ASP
248
n
248
ASP
248
A
ILE
249
n
249
ILE
249
A
PHE
250
n
250
PHE
250
A
ASP
251
n
251
ASP
251
A
ASP
252
n
252
ASP
252
A
ILE
253
n
253
ILE
253
A
ILE
254
n
254
ILE
254
A
GLN
255
n
255
GLN
255
A
PHE
256
n
256
PHE
256
A
LEU
257
n
257
LEU
257
A
ASN
258
n
258
ASN
258
A
LYS
259
n
259
LYS
259
A
HIS
260
n
260
HIS
260
A
n
261
261
A
n
262
262
A
n
263
263
A
n
264
264
A
n
265
265
A
n
266
266
A
n
267
267
A
n
268
268
A
n
269
269
A
n
270
270
A
n
271
271
A
n
272
272
A
n
1
1
B
n
2
2
B
ARG
3
n
3
ARG
3
B
ASN
4
n
4
ASN
4
B
LEU
5
n
5
LEU
5
B
VAL
6
n
6
VAL
6
B
ILE
7
n
7
ILE
7
B
ASP
8
n
8
ASP
8
B
ILE
9
n
9
ILE
9
B
THR
10
n
10
THR
10
B
LYS
11
n
11
LYS
11
B
LYS
12
n
12
LYS
12
B
PRO
13
n
13
PRO
13
B
THR
14
n
14
THR
14
B
GLN
15
n
15
GLN
15
B
ASN
16
n
16
ASN
16
B
ILE
17
n
17
ILE
17
B
PRO
18
n
18
PRO
18
B
PRO
19
n
19
PRO
19
B
THR
20
n
20
THR
20
B
ASN
21
n
21
ASN
21
B
GLU
22
n
22
GLU
22
B
ILE
23
n
23
ILE
23
B
ILE
24
n
24
ILE
24
B
GLU
25
n
25
GLU
25
B
GLU
26
n
26
GLU
26
B
ALA
27
n
27
ALA
27
B
ILE
28
n
28
ILE
28
B
THR
29
n
29
THR
29
B
GLU
30
n
30
GLU
30
B
LEU
31
n
31
LEU
31
B
ASN
32
n
32
ASN
32
B
VAL
33
n
33
VAL
33
B
ASP
34
n
34
ASP
34
B
GLU
35
n
35
GLU
35
B
LEU
36
n
36
LEU
36
B
LEU
37
n
37
LEU
37
B
ASP
38
n
38
ASP
38
B
ARG
39
n
39
ARG
39
B
LEU
40
n
40
LEU
40
B
PHE
41
n
41
PHE
41
B
GLU
42
n
42
GLU
42
B
LYS
43
n
43
LYS
43
B
ASP
44
n
44
ASP
44
B
GLU
45
n
45
GLU
45
B
SER
46
n
46
SER
46
B
GLY
47
n
47
GLY
47
B
GLU
48
n
48
GLU
48
B
VAL
49
n
49
VAL
49
B
ILE
50
n
50
ILE
50
B
THR
51
n
51
THR
51
B
PRO
52
n
52
PRO
52
B
SER
53
n
53
SER
53
B
ARG
54
n
54
ARG
54
B
ILE
55
n
55
ILE
55
B
ALA
56
n
56
ALA
56
B
LYS
57
n
57
LYS
57
B
MSE
58
n
58
MSE
58
B
LEU
59
n
59
LEU
59
B
GLU
60
n
60
GLU
60
B
GLU
61
n
61
GLU
61
B
LYS
62
n
62
LYS
62
B
ALA
63
n
63
ALA
63
B
PHE
64
n
64
PHE
64
B
GLU
65
n
65
GLU
65
B
ILE
66
n
66
ILE
66
B
TYR
67
n
67
TYR
67
B
LYS
68
n
68
LYS
68
B
GLU
69
n
69
GLU
69
B
TYR
70
n
70
TYR
70
B
GLU
71
n
71
GLU
71
B
LYS
72
n
72
LYS
72
B
GLN
73
n
73
GLN
73
B
VAL
74
n
74
VAL
74
B
ARG
75
n
75
ARG
75
B
GLU
76
n
76
GLU
76
B
ALA
77
n
77
ALA
77
B
TYR
78
n
78
TYR
78
B
LEU
79
n
79
LEU
79
B
SER
80
n
80
SER
80
B
ALA
81
n
81
ALA
81
B
GLY
82
n
82
GLY
82
B
TYR
83
n
83
TYR
83
B
SER
84
n
84
SER
84
B
ARG
85
n
85
ARG
85
B
GLU
86
n
86
GLU
86
B
LYS
87
n
87
LYS
87
B
LEU
88
n
88
LEU
88
B
GLU
89
n
89
GLU
89
B
GLN
90
n
90
GLN
90
B
SER
91
n
91
SER
91
B
PHE
92
n
92
PHE
92
B
GLN
93
n
93
GLN
93
B
GLN
94
n
94
GLN
94
B
ALA
95
n
95
ALA
95
B
ARG
96
n
96
ARG
96
B
PHE
97
n
97
PHE
97
B
SER
98
n
98
SER
98
B
ARG
99
n
99
ARG
99
B
GLY
100
n
100
GLY
100
B
GLY
101
n
101
GLY
101
B
LYS
102
n
102
LYS
102
B
ALA
103
n
103
ALA
103
B
PHE
104
n
104
PHE
104
B
GLU
105
n
105
GLU
105
B
ILE
106
n
106
ILE
106
B
ILE
107
n
107
ILE
107
B
PHE
108
n
108
PHE
108
B
THR
109
n
109
THR
109
B
LYS
110
n
110
LYS
110
B
LEU
111
n
111
LEU
111
B
LEU
112
n
112
LEU
112
B
ASN
113
n
113
ASN
113
B
LYS
114
n
114
LYS
114
B
PHE
115
n
115
PHE
115
B
GLY
116
n
116
GLY
116
B
ILE
117
n
117
ILE
117
B
ARG
118
n
118
ARG
118
B
TYR
119
n
119
TYR
119
B
GLU
120
n
120
GLU
120
B
HIS
121
n
121
HIS
121
B
ASP
122
n
122
ASP
122
B
ARG
123
n
123
ARG
123
B
VAL
124
n
124
VAL
124
B
ILE
125
n
125
ILE
125
B
LYS
126
n
126
LYS
126
B
ILE
127
n
127
ILE
127
B
TYR
128
n
128
TYR
128
B
ASP
129
n
129
ASP
129
B
TYR
130
n
130
TYR
130
B
ILE
131
n
131
ILE
131
B
THR
132
n
132
THR
132
B
GLU
133
n
133
GLU
133
B
GLY
134
n
134
GLY
134
B
GLU
135
n
135
GLU
135
B
LYS
136
n
136
LYS
136
B
PRO
137
n
137
PRO
137
B
ALA
138
n
138
ALA
138
B
PHE
139
n
139
PHE
139
B
ILE
140
n
140
ILE
140
B
ILE
141
n
141
ILE
141
B
PRO
142
n
142
PRO
142
B
SER
143
n
143
SER
143
B
VAL
144
n
144
VAL
144
B
ARG
145
n
145
ARG
145
B
THR
146
n
146
THR
146
B
PHE
147
n
147
PHE
147
B
LEU
148
n
148
LEU
148
B
ASN
149
n
149
ASN
149
B
ASP
150
n
150
ASP
150
B
PRO
151
n
151
PRO
151
B
SER
152
n
152
SER
152
B
SER
153
n
153
SER
153
B
ALA
154
n
154
ALA
154
B
ILE
155
n
155
ILE
155
B
LEU
156
n
156
LEU
156
B
ILE
157
n
157
ILE
157
B
THR
158
n
158
THR
158
B
VAL
159
n
159
VAL
159
B
LYS
160
n
160
LYS
160
B
ARG
161
n
161
ARG
161
B
LYS
162
n
162
LYS
162
B
VAL
163
n
163
VAL
163
B
ARG
164
n
164
ARG
164
B
GLU
165
n
165
GLU
165
B
ARG
166
n
166
ARG
166
B
TRP
167
n
167
TRP
167
B
ARG
168
n
168
ARG
168
B
GLU
169
n
169
GLU
169
B
ALA
170
n
170
ALA
170
B
VAL
171
n
171
VAL
171
B
GLY
172
n
172
GLY
172
B
GLU
173
n
173
GLU
173
B
ALA
174
n
174
ALA
174
B
GLN
175
n
175
GLN
175
B
ILE
176
n
176
ILE
176
B
LEU
177
n
177
LEU
177
B
ARG
178
n
178
ARG
178
B
ASN
179
n
179
ASN
179
B
LYS
180
n
180
LYS
180
B
PHE
181
n
181
PHE
181
B
GLY
182
n
182
GLY
182
B
ASP
183
n
183
ASP
183
B
GLU
184
n
184
GLU
184
B
ILE
185
n
185
ILE
185
B
ASN
186
n
186
ASN
186
B
PHE
187
n
187
PHE
187
B
TRP
188
n
188
TRP
188
B
PHE
189
n
189
PHE
189
B
VAL
190
n
190
VAL
190
B
GLY
191
n
191
GLY
191
B
PHE
192
n
192
PHE
192
B
ASP
193
n
193
ASP
193
B
GLU
194
n
194
GLU
194
B
GLU
195
n
195
GLU
195
B
PHE
196
n
196
PHE
196
B
THR
197
n
197
THR
197
B
ILE
198
n
198
ILE
198
B
TYR
199
n
199
TYR
199
B
SER
200
n
200
SER
200
B
ALA
201
n
201
ALA
201
B
ILE
202
n
202
ILE
202
B
ALA
203
n
203
ALA
203
B
MSE
204
n
204
MSE
204
B
LEU
205
n
205
LEU
205
B
ASP
206
n
206
ASP
206
B
ASN
207
n
207
ASN
207
B
GLY
208
n
208
GLY
208
B
ILE
209
n
209
ILE
209
B
ASP
210
n
210
ASP
210
B
ARG
211
n
211
ARG
211
B
VAL
212
n
212
VAL
212
B
TYR
213
n
213
TYR
213
B
VAL
214
n
214
VAL
214
B
ILE
215
n
215
ILE
215
B
ASP
216
n
216
ASP
216
B
GLY
217
n
217
GLY
217
B
ARG
218
n
218
ARG
218
B
TYR
219
n
219
TYR
219
B
ASP
220
n
220
ASP
220
B
SER
221
n
221
SER
221
B
LEU
222
n
222
LEU
222
B
ILE
223
n
223
ILE
223
B
GLU
224
n
224
GLU
224
B
GLU
225
n
225
GLU
225
B
ILE
226
n
226
ILE
226
B
LYS
227
n
227
LYS
227
B
ARG
228
n
228
ARG
228
B
ILE
229
n
229
ILE
229
B
SER
230
n
230
SER
230
B
ASP
231
n
231
ASP
231
B
PRO
232
n
232
PRO
232
B
ASN
233
n
233
ASN
233
B
PHE
234
n
234
PHE
234
B
ASN
235
n
235
ASN
235
B
GLU
236
n
236
GLU
236
B
ASP
237
n
237
ASP
237
B
LYS
238
n
238
LYS
238
B
TYR
239
n
239
TYR
239
B
ILE
240
n
240
ILE
240
B
GLN
241
n
241
GLN
241
B
LYS
242
n
242
LYS
242
B
ILE
243
n
243
ILE
243
B
ARG
244
n
244
ARG
244
B
ARG
245
n
245
ARG
245
B
PHE
246
n
246
PHE
246
B
SER
247
n
247
SER
247
B
ASP
248
n
248
ASP
248
B
ILE
249
n
249
ILE
249
B
PHE
250
n
250
PHE
250
B
ASP
251
n
251
ASP
251
B
ASP
252
n
252
ASP
252
B
ILE
253
n
253
ILE
253
B
ILE
254
n
254
ILE
254
B
GLN
255
n
255
GLN
255
B
PHE
256
n
256
PHE
256
B
LEU
257
n
257
LEU
257
B
ASN
258
n
258
ASN
258
B
LYS
259
n
259
LYS
259
B
HIS
260
n
260
HIS
260
B
n
261
261
B
n
262
262
B
n
263
263
B
n
264
264
B
n
265
265
B
n
266
266
B
n
267
267
B
n
268
268
B
n
269
269
B
n
270
270
B
n
271
271
B
n
272
272
B
0.3369
0.1164
0.1181
2.6192
1.1657
0.6845
0.0236
-0.1015
-0.0025
0.1321
-0.0748
0.1623
0.1026
-0.0326
0.0512
-0.0230
-0.0221
0.0210
-0.0076
-0.0091
-0.0264
refined
10.6200
44.3010
26.5350
X-RAY DIFFRACTION
0.8230
-0.0817
-0.2744
0.1630
-0.1408
0.8565
0.0373
-0.0706
0.1169
-0.0013
-0.0098
0.0106
-0.0463
0.0266
-0.0275
-0.0079
-0.0078
0.0011
-0.0378
-0.0241
-0.0130
refined
25.1460
64.2380
21.3420
X-RAY DIFFRACTION
0.1689
0.2793
-0.2922
0.5480
-0.4117
0.7019
-0.0153
-0.0120
-0.0669
-0.0547
0.0478
-0.0648
0.0694
0.0104
-0.0325
0.0233
0.0115
0.0194
-0.0263
-0.0060
-0.0209
refined
36.1480
31.1280
5.7150
X-RAY DIFFRACTION
0.4988
-0.1151
-0.0434
0.5720
0.2778
0.7173
-0.0143
0.0350
0.0697
-0.0598
0.0386
-0.0603
-0.0236
0.0405
-0.0243
-0.0018
-0.0205
0.0139
-0.0262
0.0073
-0.0228
refined
37.2970
55.8660
1.2650
X-RAY DIFFRACTION
0.5332
-0.2184
-0.4552
0.7940
0.0142
0.4988
-0.0244
-0.0162
0.0421
0.0162
0.0122
-0.0509
0.0201
0.0364
0.0122
0.0051
-0.0024
0.0033
-0.0158
-0.0006
-0.0179
refined
26.4000
43.8350
14.7650
X-RAY DIFFRACTION
A
2
A
116
X-RAY DIFFRACTION
1
A
117
A
260
X-RAY DIFFRACTION
2
B
3
B
116
X-RAY DIFFRACTION
3
B
117
B
260
X-RAY DIFFRACTION
4
C
-5
C
5
X-RAY DIFFRACTION
5
D
-6
D
4
X-RAY DIFFRACTION
5
author_and_software_defined_assembly
PISA
4
tetrameric
10070
A
MSE
58
SELENOMETHIONINE
C
MSE
58
MET
A
MSE
204
SELENOMETHIONINE
C
MSE
204
MET
B
MSE
58
SELENOMETHIONINE
D
MSE
58
MET
B
MSE
204
SELENOMETHIONINE
D
MSE
204
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
125
C
N
ILE
125
A
O
GLU
135
C
O
GLU
135
A
N
ILE
141
C
N
ILE
141
A
O
ILE
155
C
O
ILE
155
A
N
LEU
156
C
N
LEU
156
A
O
TRP
188
C
O
TRP
188
A
N
PHE
189
C
N
PHE
189
A
O
TYR
213
C
O
TYR
213
A
N
VAL
212
C
N
VAL
212
A
O
ARG
244
C
O
ARG
244
B
N
GLU
120
D
N
GLU
120
B
O
ILE
140
D
O
ILE
140
B
N
ILE
141
D
N
ILE
141
B
O
ILE
155
D
O
ILE
155
B
N
LEU
156
D
N
LEU
156
B
O
TRP
188
D
O
TRP
188
B
N
PHE
189
D
N
PHE
189
B
O
TYR
213
D
O
TYR
213
B
N
VAL
212
D
N
VAL
212
B
O
ARG
244
D
O
ARG
244
1
B
NE
ARG
3
D
NE
ARG
3
0
Y
1
B
CZ
ARG
3
D
CZ
ARG
3
0
Y
1
B
NH1
ARG
3
D
NH1
ARG
3
0
Y
1
B
NH2
ARG
3
D
NH2
ARG
3
0
Y
1
A
MSE
1
C
MSE
1
1
Y
1
A
GLY
261
C
GLY
261
1
Y
1
A
ASN
262
C
ASN
262
1
Y
1
A
LYS
263
C
LYS
263
1
Y
1
A
LYS
264
C
LYS
264
1
Y
1
A
ARG
265
C
ARG
265
1
Y
1
A
GLY
266
C
GLY
266
1
Y
1
A
LYS
267
C
LYS
267
1
Y
1
A
GLN
268
C
GLN
268
1
Y
1
A
LEU
269
C
LEU
269
1
Y
1
A
THR
270
C
THR
270
1
Y
1
A
LEU
271
C
LEU
271
1
Y
1
A
VAL
272
C
VAL
272
1
Y
1
B
MSE
1
D
MSE
1
1
Y
1
B
VAL
2
D
VAL
2
1
Y
1
B
GLY
261
D
GLY
261
1
Y
1
B
ASN
262
D
ASN
262
1
Y
1
B
LYS
263
D
LYS
263
1
Y
1
B
LYS
264
D
LYS
264
1
Y
1
B
ARG
265
D
ARG
265
1
Y
1
B
GLY
266
D
GLY
266
1
Y
1
B
LYS
267
D
LYS
267
1
Y
1
B
GLN
268
D
GLN
268
1
Y
1
B
LEU
269
D
LEU
269
1
Y
1
B
THR
270
D
THR
270
1
Y
1
B
LEU
271
D
LEU
271
1
Y
1
B
VAL
272
D
VAL
272
1
Y
1
A
ARG
161
-81.61
-107.10
1
A
ARG
164
46.13
-133.35
1
B
ARG
161
-84.48
-104.43
1
B
ARG
164
47.01
-131.82
17.9
-0.63
0.00
0.00
-1.11
0.00
1.74
0.962
0.955
CNS HAS BEEN USED FOR DNA REFINEMENT. NO CONSTRAINTS FOR SUGAR PUCKER WERE APPLIED. RESIDUES AT THE ENDS OF THE DNA DUPLEX ( 5 AND 5 IN CHAIN C AND -6 AND -5 IN CHAIN D) HAVE POOR DENSITY. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. TLS REFINEMENT HAS BEEN USED.
0.1924
0.1698
0.1710
0.1710
1.70
19.38
3230
63135
63135
5.1
98.7
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.109
0.099
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
MASK
1.70
19.38
293
5070
13
445
4319
0.013
0.022
5167
0.000
0.020
3538
1.369
2.077
7083
3.852
3.000
8607
5.086
5.000
567
33.037
24.024
251
13.786
15.000
898
18.083
15.000
42
0.079
0.200
754
0.008
0.020
5511
0.010
0.020
1058
0.222
0.200
1308
0.252
0.200
4044
0.199
0.200
2669
0.103
0.200
2557
0.149
0.200
361
0.223
0.200
33
0.257
0.200
70
0.138
0.200
10
0.785
1.500
2739
0.000
1.500
1092
1.417
2.000
4496
2.344
3.000
2428
3.686
4.500
2587
0.222
0.202
1.744
236
4290
4290
20
97.5
20.7
1.7
20.0
3BM3
63138
63138
0.065
1
21.3
3.3
98.7
1.70
1.72
3.2
2460
0.254
1
3.1
98.0
phasing
SHELXD
model building
SHELXE
model building
DM
model building
ARP/wARP
refinement
REFMAC
5.2.0019
data collection
MAR345
data reduction
DENZO
data scaling
SCALEPACK
phasing
DM
Restriction endonuclease PspGI-substrate DNA complex
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
THE TETRAMER (ACCORDING TO PDB CONVENTIONS) IS A COMPLEX OF THE DIMERIC RESTRICTION ENZYME WITH ITS SUBSTRATE, DOUBLE STRANDED DNA.
A
LYS
12
C
LYS
12
HELX_P
A
ILE
17
C
ILE
17
5
1
6
A
PRO
19
C
PRO
19
HELX_P
A
ASN
32
C
ASN
32
1
2
14
A
ASN
32
C
ASN
32
HELX_P
A
ARG
39
C
ARG
39
1
3
8
A
THR
51
C
THR
51
HELX_P
A
ALA
81
C
ALA
81
1
4
31
A
SER
84
C
SER
84
HELX_P
A
GLY
116
C
GLY
116
1
5
33
A
SER
143
C
SER
143
HELX_P
A
ASP
150
C
ASP
150
1
6
8
A
PRO
151
C
PRO
151
HELX_P
A
SER
153
C
SER
153
5
7
3
A
ARG
166
C
ARG
166
HELX_P
A
GLY
182
C
GLY
182
1
8
17
A
THR
197
C
THR
197
HELX_P
A
ASN
207
C
ASN
207
1
9
11
A
ILE
215
C
ILE
215
HELX_P
A
ARG
228
C
ARG
228
1
10
14
A
ASN
235
C
ASN
235
HELX_P
A
GLN
241
C
GLN
241
1
11
7
A
ASP
248
C
ASP
248
HELX_P
A
HIS
260
C
HIS
260
1
12
13
B
LYS
12
D
LYS
12
HELX_P
B
ILE
17
D
ILE
17
5
13
6
B
PRO
19
D
PRO
19
HELX_P
B
LEU
31
D
LEU
31
1
14
13
B
ASN
32
D
ASN
32
HELX_P
B
ASP
38
D
ASP
38
1
15
7
B
THR
51
D
THR
51
HELX_P
B
ALA
81
D
ALA
81
1
16
31
B
SER
84
D
SER
84
HELX_P
B
PHE
115
D
PHE
115
1
17
32
B
SER
143
D
SER
143
HELX_P
B
ASP
150
D
ASP
150
1
18
8
B
PRO
151
D
PRO
151
HELX_P
B
ALA
154
D
ALA
154
5
19
4
B
ARG
166
D
ARG
166
HELX_P
B
GLY
182
D
GLY
182
1
20
17
B
THR
197
D
THR
197
HELX_P
B
ASP
206
D
ASP
206
1
21
10
B
ILE
215
D
ILE
215
HELX_P
B
ARG
228
D
ARG
228
1
22
14
B
ASN
235
D
ASN
235
HELX_P
B
LYS
242
D
LYS
242
1
23
8
B
ASP
248
D
ASP
248
HELX_P
B
HIS
260
D
HIS
260
1
24
13
covale
1.330
both
A
A
LYS
57
C
C
LYS
57
1_555
A
MSE
58
C
N
MSE
58
1_555
covale
1.331
both
B
A
LYS
57
C
C
LYS
57
1_555
A
MSE
58
C
N
MSE
58
1_555
covale
1.332
both
A
A
MSE
58
C
C
MSE
58
1_555
A
LEU
59
C
N
LEU
59
1_555
covale
1.332
both
B
A
MSE
58
C
C
MSE
58
1_555
A
LEU
59
C
N
LEU
59
1_555
covale
1.327
both
A
A
ALA
203
C
C
ALA
203
1_555
A
MSE
204
C
N
MSE
204
1_555
covale
1.327
both
B
A
ALA
203
C
C
ALA
203
1_555
A
MSE
204
C
N
MSE
204
1_555
covale
1.324
both
A
A
MSE
204
C
C
MSE
204
1_555
A
LEU
205
C
N
LEU
205
1_555
covale
1.325
both
B
A
MSE
204
C
C
MSE
204
1_555
A
LEU
205
C
N
LEU
205
1_555
covale
1.327
both
A
B
LYS
57
D
C
LYS
57
1_555
B
MSE
58
D
N
MSE
58
1_555
covale
1.326
both
B
B
LYS
57
D
C
LYS
57
1_555
B
MSE
58
D
N
MSE
58
1_555
covale
1.325
both
A
B
MSE
58
D
C
MSE
58
1_555
B
LEU
59
D
N
LEU
59
1_555
covale
1.326
both
B
B
MSE
58
D
C
MSE
58
1_555
B
LEU
59
D
N
LEU
59
1_555
covale
1.327
both
A
B
ALA
203
D
C
ALA
203
1_555
B
MSE
204
D
N
MSE
204
1_555
covale
1.330
both
B
B
ALA
203
D
C
ALA
203
1_555
B
MSE
204
D
N
MSE
204
1_555
covale
1.322
both
A
B
MSE
204
D
C
MSE
204
1_555
B
LEU
205
D
N
LEU
205
1_555
covale
1.324
both
B
B
MSE
204
D
C
MSE
204
1_555
B
LEU
205
D
N
LEU
205
1_555
hydrog
WATSON-CRICK
C
DA
-4
A
N1
DA
2
1_555
D
DT
4
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
C
DA
-4
A
N6
DA
2
1_555
D
DT
4
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
C
DT
-3
A
N3
DT
3
1_555
D
DA
3
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
C
DT
-3
A
O4
DT
3
1_555
D
DA
3
B
N6
DA
10
1_555
hydrog
WATSON-CRICK
C
DC
-2
A
N3
DC
4
1_555
D
DG
2
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
C
DC
-2
A
N4
DC
4
1_555
D
DG
2
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
C
DC
-2
A
O2
DC
4
1_555
D
DG
2
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
C
DC
-1
A
N3
DC
5
1_555
D
DG
1
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
C
DC
-1
A
N4
DC
5
1_555
D
DG
1
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
C
DC
-1
A
O2
DC
5
1_555
D
DG
1
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
C
DG
1
A
N1
DG
7
1_555
D
DC
-1
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
1
A
N2
DG
7
1_555
D
DC
-1
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
1
A
O6
DG
7
1_555
D
DC
-1
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
2
A
N1
DG
8
1_555
D
DC
-2
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
C
DG
2
A
N2
DG
8
1_555
D
DC
-2
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
C
DG
2
A
O6
DG
8
1_555
D
DC
-2
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
C
DT
3
A
N3
DT
9
1_555
D
DA
-3
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
C
DT
3
A
O4
DT
9
1_555
D
DA
-3
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
C
DA
4
A
N1
DA
10
1_555
D
DT
-4
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
C
DA
4
A
N6
DA
10
1_555
D
DT
-4
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
C
DC
5
A
N3
DC
11
1_555
D
DG
-5
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
C
DC
5
A
N4
DC
11
1_555
D
DG
-5
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
C
DC
5
A
O2
DC
11
1_555
D
DG
-5
B
N2
DG
2
1_555
HYDROLASE/DNA
ENDONUCLEASE-DNA COMPLEX, RESTRICTION ENZYME, PSPGI, BASE FLIPPING, HYDROLASE-DNA COMPLEX
A
ILE
141
C
ILE
141
1
A
PRO
142
C
PRO
142
2.28
B
ILE
141
D
ILE
141
1
B
PRO
142
D
PRO
142
0.62
O93646_9EURY
UNP
3
1
O93646
MVRNLVIDITKKPTQNIPPTNEIIEEAITELNVDELLDRLFEKDESGEVITPSRIAKMLEEKAFEIYKEYEKQVREAYLS
AGYSREKLEQSFQQARFSRGGKAFEIIFTKLLNKFGIRYEHDRVIKIYDYITEGEKPDFIIPSVRAFLNDPSSAILITVK
RKVRERWREAVGEAQILRNKFGDEINFWFVGFDEEFTIYSAIAMLDNGIDRVYVIDGRYDSLIEEIKRISDPNFNEDKYI
QKIRRFSDIFDDIIQFLNKHGNKKRGKQLTLV
3BM3
PDB
1
-5
3BM3
CATCCAGGTAC
3BM3
PDB
2
-6
3BM3
GGTACCTGGAT
1
272
3BM3
1
272
O93646
A
1
1
272
1
272
3BM3
1
272
O93646
B
1
1
272
-5
5
3BM3
-5
5
3BM3
C
2
1
11
-6
4
3BM3
-6
4
3BM3
D
3
1
11
1
ASP
engineered mutation
ALA
138
3BM3
A
O93646
UNP
138
138
1
ALA
engineered mutation
THR
146
3BM3
A
O93646
UNP
146
146
2
ASP
engineered mutation
ALA
138
3BM3
B
O93646
UNP
138
138
2
ALA
engineered mutation
THR
146
3BM3
B
O93646
UNP
146
146
2
5
6
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
A
ILE
125
C
ILE
125
A
LYS
126
C
LYS
126
A
GLY
134
C
GLY
134
A
GLU
135
C
GLU
135
A
PHE
139
C
PHE
139
A
ILE
141
C
ILE
141
A
ILE
155
C
ILE
155
A
LYS
160
C
LYS
160
A
ASN
186
C
ASN
186
A
GLY
191
C
GLY
191
A
ARG
211
C
ARG
211
A
VAL
214
C
VAL
214
A
ILE
243
C
ILE
243
A
ARG
245
C
ARG
245
B
GLU
120
D
GLU
120
B
HIS
121
D
HIS
121
B
PHE
139
D
PHE
139
B
ILE
141
D
ILE
141
B
ILE
155
D
ILE
155
B
VAL
159
D
VAL
159
B
PHE
187
D
PHE
187
B
VAL
190
D
VAL
190
B
ARG
211
D
ARG
211
B
VAL
214
D
VAL
214
B
ILE
243
D
ILE
243
B
ARG
245
D
ARG
245
BINDING SITE FOR RESIDUE CIT B 273
B
CIT
273
Software
8
B
ASP
210
D
ASP
210
8
1_555
B
ARG
211
D
ARG
211
8
1_555
B
GLN
241
D
GLN
241
8
1_555
B
LYS
242
D
LYS
242
8
1_555
B
HOH
289
I
HOH
8
1_555
B
HOH
330
I
HOH
8
1_555
B
HOH
334
I
HOH
8
1_555
B
HOH
383
I
HOH
8
1_555
19
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